Resource Type:
Polypeptide
Name:
DCAR_027356
Identifier:
DCAR_027356.mRNA-protein
Sequence:
MNSVLPSPRFPDLNGFPDTTAFRVEPKLEPLDEDLESPPGMFTPGSSARN
RNPGFDLNANADGVASVGTSSGVSKGAAAPEASNVLSEFNRISEIFNSAF
TSGGCEEEESVMEEEERNELALAIVAVPEEQAIVPKKIKYPPRSNELVRV
TNLTEEDEQYYREIVRRARMIFDSLSVSAVVDDDRNIAGGTFDRKTRGDT
KAAGLMRECGLWLNRDKRIVGAIPGIEIGDVFFFRMELCVLGLHGQVQAG
IDYLPSNRSSNGEPVATSVIVSGGYEDDEDSGYVITYTGHGGQDKNGKQC
AHQKLEGGNLALERSMHYEVEVRVIRGFRYSGANSGKIYVYDGLYKVVDT
WFDVGKSGFGVYKFKLVRMENQPEMGSTILKMAQMLKTKPLDVRPRGYLC
LDLSGKKETMPVLLFNDIDNDQDPLHHQYLVSTVIPKYVFQVGSHSGCEC
ISGCSFDCLCILKNGGEFPYDNKGMLIKGKPLVFECGPQCRCPPTCRNRV
SQKGVRSRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTRDQAQVIS
MVGDTLVYPSRFAERWAEWGELSQIYSDYVRPSYPAIPPLDFAMDVSSLR
NVACYISHSNSPNVFAQFVLFDHNNVMFPRTMLFAMENIPPLRELSLDYG
VAEEWTAKLAICN*
Sequence Length:
664
Sequence Checksum:
5e8b1b57e3844f6d7e11a4264e42465c
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_027356, derives from mRNA, DCAR_027356. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_027356 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_027356 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5C1T0 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8548896.1}))
HSP 1 Score: 891.723 bits (2303), Expect = 0.000e+0
Identity = 423/649 (65.18%), Postives = 524/649 (80.74%), Query Frame = 0
Match: A0A5J5C1T0 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8548896.1}))
HSP 1 Score: 891.723 bits (2303), Expect = 0.000e+0
Identity = 423/649 (65.18%), Postives = 524/649 (80.74%), Query Frame = 0
Query: 23 RVEPKLEPLDEDLESPPGMFTPGSSARNRNPGFDLNANADGVASVGTS--SGVSKGAAAP-EASNVLSEFNRISEIFNSAFTSGGCEEEESVMEEEERNELALAIVAVPEEQ----AIVPKKIKYPPRSNELVRVTNLTEEDEQYYREIVRRARMIFDSLSVSAVVDDDRNIAGGTFDRKTRGDTKAAGLMRECGLWLNRDKRIVGAIPGIEIGDVFFFRMELCVLGLHGQVQAGIDYLPSNRSSNGEPVATSVIVSGGYEDDEDSGYVITYTGHGGQDKNGKQCAHQKLEGGNLALERSMHYEVEVRVIRGFRYSGANSGKIYVYDGLYKVVDTWFDVGKSGFGVYKFKLVRMENQPEMGSTILKMAQMLKTKPLDVRPRGYLCLDLSGKKETMPVLLFNDIDNDQDPLHHQYLVSTVIPKYVF-QVGSHSGCECISGCSFDCLCILKNGGEFPYDNKGMLIKGKPLVFECGPQCRCPPTCRNRVSQKGVRSRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTRDQAQVISMVGDTLVYPSRFAERWAEWGELSQIYSDYVRPSYPAIPPLDFAMDVSSLRNVACYISHSNSPNVFAQFVLFDHNNVMFPRTMLFAMENIPPLRELSLDYGVAEEWTAKLAICN 663
++EPKLEPLDE L S F N NP F N+ D S + + ++ P E +NV SEF R+SE+F +AF ++ +S + E + + AIV VPEE +V +YP RS ELVRVT+L ED++Y+R+IVRR RM++DSL + ++V++++ G RK RGD KAA +MR+ GLWLNRDKRIVG+IPG+ IGD+FFFRMELCV+GLHGQ+QAGIDY+P+++SSNGEP+ATS+IVSGGYEDDED+G VI YTGHGGQDK+ +QC HQKLEGGNLALERSMHY +EVRVIRGF+Y G+ SGK+YVYDGLY+++D+WFDVGKSGFGVYK+KLVRM+NQP+MGS IL+ AQ L+++PL VRP GY+ LD+S KKE +PV L+NDIDND +P++++YLV+TV P Y + G+ +GC+C+SGC DC C +KNGGE YD G+L++GKPL+FECG CRCPPTCRNRVSQKGVR+RFEVFRSRETGWGVRSLDLIQAGAFICEYAGV+LTR+QAQV +M GD+LVYP+RFA+RWAEWG+LSQI+SDYVRP YP+IPPLDFAMDVS +RNVACY+SHS+SPNV QFVL+DHNN++FP MLFAMENIPPLRELSLDYGVA+EWT KLAICN
Sbjct: 37 KIEPKLEPLDEPLGSH-TEFLQSPYFSNPNPSFSFNSQPDTPFSEPDTDPNAPTRAPDNPSEENNVYSEFYRVSELFRTAFA----QQLQSYGDVEVMDPDSRAIVPVPEENRVSTVVVTPARRYPKRSAELVRVTDLGVEDQRYFRDIVRRTRMVYDSLRIFSIVEEEKRRLQGGLGRKPRGDLKAASVMRDRGLWLNRDKRIVGSIPGVHIGDLFFFRMELCVVGLHGQIQAGIDYVPASQSSNGEPIATSIIVSGGYEDDEDAGDVIVYTGHGGQDKHSRQCVHQKLEGGNLALERSMHYGIEVRVIRGFKYEGSVSGKVYVYDGLYRILDSWFDVGKSGFGVYKYKLVRMDNQPQMGSAILRFAQNLRSRPLTVRPVGYISLDISMKKENVPVSLYNDIDNDHEPMYYEYLVTTVFPPYAYHHRGNGTGCDCVSGCLDDCFCAMKNGGELAYDQNGILLRGKPLIFECGAHCRCPPTCRNRVSQKGVRNRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVILTREQAQVFTMNGDSLVYPNRFADRWAEWGDLSQIFSDYVRPMYPSIPPLDFAMDVSRMRNVACYMSHSSSPNVLVQFVLYDHNNLLFPHLMLFAMENIPPLRELSLDYGVADEWTGKLAICN 680
BLAST of DCAR_027356 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2J6MGK1 ((Uncharacterized protein {ECO:0000313|EMBL:PLY98729.1}))
HSP 1 Score: 867.07 bits (2239), Expect = 0.000e+0
Identity = 420/659 (63.73%), Postives = 516/659 (78.30%), Query Frame = 0
Match: A0A2J6MGK1 ((Uncharacterized protein {ECO:0000313|EMBL:PLY98729.1}))
HSP 1 Score: 867.07 bits (2239), Expect = 0.000e+0
Identity = 420/659 (63.73%), Postives = 516/659 (78.30%), Query Frame = 0
Query: 15 GFPDTTAF----RVEPKLEPLDEDLESPPGMFTPGSSARNRNPGFDLNANADGVASVGTSSGVSKGAAAPEASNVLSEFNRISEIFNSAFTSGGCEEEESVMEEEERNELALAIVAVPEEQ----AIVPKKIKYPPRSNELVRVTNLTEEDEQYYREIVRRARMIFDSLSVSAVVDDDRNIAGGTFDR-KTRGDTKAAGLMRECGLWLNRDKRIVGAIPGIEIGDVFFFRMELCVLGLHGQVQAGIDYLPSNRSSNGEPVATSVIVSGGYEDDEDSGYVITYTGHGGQDKNGKQCAHQKLEGGNLALERSMHYEVEVRVIRGFRYSGANSGKIYVYDGLYKVVDTWFDVGKSGFGVYKFKLVRMENQPEMGSTILKMAQMLKTKPLDVRPRGYLCLDLSGKKETMPVLLFNDIDNDQDPLHHQYLVSTVIPKYVFQ-VGSHSGCECISGCSFDCLCILKNGGEFPYDNKGMLIKGKPLVFECGPQCRCPPTCRNRVSQKGVRSRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTRDQAQVISMVGDTLVYPSRFAERWAEWGELSQIYSDYVRPSYPAIPPLDFAMDVSSLRNVACYISHSNSPNVFAQFVLFDHNNVMFPRTMLFAMENIPPLRELSLDYGVAEEWTAKLAICN 663
G+ DT A +VEPKLEPLDE + PP N NP G+ S T++ V + +NV SE+NRISE+F +AF ++ E+ E + + A AIV VPEE IVP + K P RS+ELVRVTNL EDE+Y+R++VR+ RMI+DSL V V++DD+ + G + RGD KA+ +M++ GLWLNRDKRIVG IPG+ +GDVFFFRMELCV+G+HGQVQAGIDYL SN+SSN EP+ATSVIVSGGYEDDED+G VI YTGHGGQDKN KQ HQKLEGGNLA+ERSMHY +EVRVIRGF+Y G+ SGK+YVYDGLYK+++ WFDVGKSGFGVYKFKLVRMENQ EMGS +LK+A+ L+TKPL+VRP GY+ D+S KKE +PV LFNDID++ +P+++ YL +TV P +V+ VG GC C+SGCS DC C KNGGEF YD+ G+L++GKPL+FECGP CRCPP C+NRVSQKGVR+RFEVFRSRETGWGVRSLDLIQAG+FICEY+GVVLTR+QAQ+ +M GD+L+YP+RF+ERWAEWG+LSQI+SDYV+PSYP +PPLDFAMDVS +RN+ACY+SHS+SPNV Q VL+DH+N+ FP MLFAMENIPPLRE S+DYG A+EW KL+I N
Sbjct: 22 GYADTAAISIIPKVEPKLEPLDESADVPP--------ESNSNPIL-------GLISQPTTALVEHSEV--DENNVYSEYNRISEMFRTAFA----KDMETYDEIQATDPDAQAIVPVPEENQLSTVIVPSRRKNPSRSSELVRVTNLGIEDERYFRDVVRKTRMIYDSLRVLVVMEDDKRRSFGIVSTPRARGDLKASAVMKDRGLWLNRDKRIVGEIPGVHVGDVFFFRMELCVVGMHGQVQAGIDYLTSNQSSNREPIATSVIVSGGYEDDEDAGDVIVYTGHGGQDKNNKQVVHQKLEGGNLAMERSMHYGIEVRVIRGFKYEGSPSGKVYVYDGLYKIIEAWFDVGKSGFGVYKFKLVRMENQTEMGSALLKLAENLRTKPLEVRPVGYISFDISMKKENIPVFLFNDIDSNHEPMYYDYLKTTVFPPFVYHNVG--GGCMCVSGCSKDCFCAQKNGGEFAYDSNGLLVRGKPLIFECGPFCRCPPNCQNRVSQKGVRNRFEVFRSRETGWGVRSLDLIQAGSFICEYSGVVLTREQAQLFTMNGDSLIYPNRFSERWAEWGDLSQIFSDYVKPSYPCVPPLDFAMDVSRMRNLACYMSHSSSPNVLVQLVLYDHSNLAFPHLMLFAMENIPPLREFSIDYGQADEWMGKLSITN 657
BLAST of DCAR_027356 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AY28 ((Putative histone H3-K9 methyltransferase, plant {ECO:0000313|EMBL:MPA60856.1}) (2.1.1.43 {ECO:0000313|EMBL:MPA60856.1}))
HSP 1 Score: 865.914 bits (2236), Expect = 0.000e+0
Identity = 418/652 (64.11%), Postives = 525/652 (80.52%), Query Frame = 0
Match: A0A5B7AY28 ((Putative histone H3-K9 methyltransferase, plant {ECO:0000313|EMBL:MPA60856.1}) (2.1.1.43 {ECO:0000313|EMBL:MPA60856.1}))
HSP 1 Score: 865.914 bits (2236), Expect = 0.000e+0
Identity = 418/652 (64.11%), Postives = 525/652 (80.52%), Query Frame = 0
Query: 23 RVEPKLEPLDEDLE--SPPGMFTPGSSARNRNPGFDLNANADGVAS---VGTSSGVSKGAAAPEASNVLSEFNRISEIFNSAFTSGGCEEEE-SVMEEEERNELALAIVAVPEEQ----AIVPKKIKYPPRSNELVRVTNLTEEDEQYYREIVRRARMIFDSLSVSAVVDDDRNIAGGTFDRKTRGDTKAAGLMRECGLWLNRDKRIVGAIPGIEIGDVFFFRMELCVLGLHGQVQAGIDYLPSNRSSNGEPVATSVIVSGGYEDDEDSGYVITYTGHGGQDKNGKQCAHQKLEGGNLALERSMHYEVEVRVIRGFRYSGANSGKIYVYDGLYKVVDTWFDVGKSGFGVYKFKLVRMENQPEMGSTILKMAQMLKTKPLDVRPRGYLCLDLSGKKETMPVLLFNDIDNDQDPLHHQYLVSTVIPKYVFQVGSHS-GCECISGCSFDCLCILKNGGEFPYDNKGMLIKGKPLVFECGPQCRCPPTCRNRVSQKGVRSRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTRDQAQVISMVGDTLVYPSRFAERWAEWGELSQIYSDYVRPSYPAIPPLDFAMDVSSLRNVACYISHSNSPNVFAQFVLFDHNNVMFPRTMLFAMENIPPLRELSLDYGVAEEWTAKLAICN 663
++EPKLEPLDE L+ + P + +P S N NP F N+ + S ++ + E +NV SEF RISE+F +AF G + V++ + R AIV VPEE +V + +Y RS+ELVR+T+L ED++Y+R+IVRR RM++DSL + ++++D++ G R+TRGD KAA +MR+ GLWLNRDKRIVG+IPG+ +GD+FFFRMELCV+GLHGQ QAGIDY+P+ +SSNGEP+ATS+IVSGGYEDDED+G VI YTG GGQDK+ +QC HQKLEGGNLALERSMHY +EVRVIRGF+Y G+ +GK+YVYDGLY+++D+WFDVGKSGFGVYK+KL+RM+NQP+MGS IL+ A+ L+T+PL VRP GY+ LD+S KKE +PV L+NDIDN+ +P++++YLV+T++P Y + G +S GC+C+SGC DCLC +KNGGEF YD G+L++GKPL+FECG CRCPPTCRNRVSQKGVR+RFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTR+QAQV +M GD+LVYP+RFA+RWAEWG+LSQI SDYVRP YP+IPPLDFAMDVS +RNVACY+S S+SPNV QFVL+DHNN++FP MLFAMENIPPLRELSLDYGVA+EWT KL ICN
Sbjct: 41 KIEPKLEPLDEPLQPHTEPPLQSPYFS--NPNPSFSFNSQPNTPFSEPETDPNALIQLPDNPAEENNVYSEFYRISELFRTAFAQGLQRYGDVEVLDPDSR-----AIVPVPEENQVSTVVVTSRRRYQQRSSELVRITDLGIEDQRYFRDIVRRTRMVYDSLRIFSMMEDEKRRGLGL--RRTRGDLKAASVMRDRGLWLNRDKRIVGSIPGVHVGDLFFFRMELCVVGLHGQAQAGIDYVPATQSSNGEPIATSIIVSGGYEDDEDAGDVIIYTGQGGQDKHSRQCFHQKLEGGNLALERSMHYGIEVRVIRGFKYEGSANGKVYVYDGLYRIIDSWFDVGKSGFGVYKYKLIRMDNQPQMGSAILRFAENLRTRPLTVRPMGYISLDISMKKEKVPVFLYNDIDNNHEPMYYEYLVTTILPPYAYHHGGNSTGCDCVSGCLDDCLCAMKNGGEFAYDQNGILLRGKPLIFECGTHCRCPPTCRNRVSQKGVRNRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTREQAQVFTMNGDSLVYPNRFADRWAEWGDLSQISSDYVRPVYPSIPPLDFAMDVSRMRNVACYMSQSSSPNVLVQFVLYDHNNLLFPHLMLFAMENIPPLRELSLDYGVADEWTGKLRICN 683
BLAST of DCAR_027356 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7YEE5 ((histone-lysine N-methyltransferase family member SUVH9-like {ECO:0000313|RefSeq:XP_009797624.1, ECO:0000313|RefSeq:XP_009797631.1}))
HSP 1 Score: 865.144 bits (2234), Expect = 0.000e+0
Identity = 431/694 (62.10%), Postives = 529/694 (76.22%), Query Frame = 0
Match: A0A1U7YEE5 ((histone-lysine N-methyltransferase family member SUVH9-like {ECO:0000313|RefSeq:XP_009797624.1, ECO:0000313|RefSeq:XP_009797631.1}))
HSP 1 Score: 865.144 bits (2234), Expect = 0.000e+0
Identity = 431/694 (62.10%), Postives = 529/694 (76.22%), Query Frame = 0
Query: 1 MNSVLPSPRFPDLNGFPDTTAF-----------RVEPKLEPLDE----DLESPPGMFTPGSSARNRNPGFDLNANADGVASVGTSSGVSKGAAAPEASNVLSEFNRISEIFNSAFTS-----GGCE-----EEESVMEEEERNELALAIVAVPEE-----QAIVPKKIKYPPRSNELVRVTNLTEEDEQYYREIVRRARMIFDSLSVSAVVDDDRNIAGGTFDRKTRGDTKAAGLMRECGLWLNRDKRIVGAIPGIEIGDVFFFRMELCVLGLHGQVQAGIDYLPSNRSSNGEPVATSVIVSGGYEDDEDSGYVITYTGHGGQDKNGKQCAHQKLEGGNLALERSMHYEVEVRVIRGFRYSGANSGKIYVYDGLYKVVDTWFDVGKSGFGVYKFKLVRMENQPEMGSTILKMAQMLKTKPLDVRPRGYLCLDLSGKKETMPVLLFNDIDNDQDPLHHQYLVSTVIPKYVFQ-VGSHSGCECISGCSFDCLCILKNGGEFPYDNKGMLIKGKPLVFECGPQCRCPPTCRNRVSQKGVRSRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTRDQAQVISMVGDTLVYPSRFAERWAEWGELSQIYSDYVRPSYPAIPPLDFAMDVSSLRNVACYISHSNSPNVFAQFVLFDHNNVMFPRTMLFAMENIPPLRELSLDYGVAEEWTAKLAICN 663
M S++P F DLN P++T ++EPKLEPLDE DL++PP P + N N N+ +S+ TS G+ +NV SE+NRISE+F AF G E E + + E + + AIV V E + ++P++ KY RS+ELVRVT+L ED++Y+R+ VRR RM++DSL V A+VDD+ N++ RKTRGD KA ++RE GLW+NRDKRIVGAIPG+ IGDVFFFRMELCV+GLHGQVQAGIDY+P+++SSN EP+ATSVIVSGGYEDD+D G VI YTGHGGQDK +QC HQKLE GNLALERSMHY +EVRVIRGF+Y G+ SGK+YVYDGLY++V+ WFDVGKSGFGVYK+KLVR+ENQ E+GS IL+ AQ L+ +PL RP GY+ LD+S KKE +PV LFNDID++ DP + YL+ TV P YV+Q VGS +GCEC++GC +C C ++NGG+F YD G+L++GKPLVFECGP C+CPPTCRNRVSQKG+R RFEVFRSRETGWGVRSLDLIQAG+FICE+ GVVLTR+QAQ+ +M GD+LVYP+RF ERWAEWG+LSQIY DYVRP+YP+IPPLDFAMDVS +RNVACY+SHS+SPNV Q VL+DHNNV FP MLFAMENIPPLRE+SLDYGVA+EWT KLAICN
Sbjct: 1 MGSLVP---FQDLNLQPESTNLTSNSPTPLITPKIEPKLEPLDEFTQADLQTPPLFSNPNTPNFNSN----FTPNSLSHSSIITSEQNPSGS---NETNVYSEYNRISELFREAFAKRMQRYGDIEIVADPENDDTRDVEVDLDNSRAIVPVNNEDNQVSEMVIPRR-KYQQRSSELVRVTDLKPEDQRYFRDAVRRTRMLYDSLRVLAMVDDENNMSV-VPHRKTRGDLKACQVLREHGLWMNRDKRIVGAIPGVFIGDVFFFRMELCVVGLHGQVQAGIDYVPASQSSNREPIATSVIVSGGYEDDQDGGDVIIYTGHGGQDKLSRQCMHQKLECGNLALERSMHYGIEVRVIRGFKYEGSASGKVYVYDGLYRIVECWFDVGKSGFGVYKYKLVRIENQEELGSAILRFAQNLRIRPLVARPTGYVSLDISRKKENVPVFLFNDIDDNHDPAYFDYLLKTVFPPYVYQNVGSGNGCECVNGCVDNCFCAMRNGGQFAYDYNGILVRGKPLVFECGPHCQCPPTCRNRVSQKGLRHRFEVFRSRETGWGVRSLDLIQAGSFICEFTGVVLTREQAQIFTMNGDSLVYPNRFPERWAEWGDLSQIYPDYVRPAYPSIPPLDFAMDVSRMRNVACYMSHSSSPNVLVQPVLYDHNNVSFPHLMLFAMENIPPLREISLDYGVADEWTGKLAICN 682
BLAST of DCAR_027356 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AC06 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8527829.1}))
HSP 1 Score: 864.374 bits (2232), Expect = 0.000e+0
Identity = 416/683 (60.91%), Postives = 533/683 (78.04%), Query Frame = 0
Match: A0A5J5AC06 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8527829.1}))
HSP 1 Score: 864.374 bits (2232), Expect = 0.000e+0
Identity = 416/683 (60.91%), Postives = 533/683 (78.04%), Query Frame = 0
Query: 1 MNSVLPSPRFPDLNGFPDTTA-------------FRVEPKLEPLDEDLE-SPPGMFTPGSSARNRNPGFDLNANADGVASVGTSSGVSKGAAAP-EASNVLSEFNRISEIFNSAFTSGGCEEEESVMEEEERNELALAIVAVPEEQAI----VPKKIKYPPRSNELVRVTNLTEEDEQYYREIVRRARMIFDSLSVSAVVDDDRNIAGGTFDRKTRGDTKAAGLMRECGLWLNRDKRIVGAIPGIEIGDVFFFRMELCVLGLHGQVQAGIDYLPSNRSSNGEPVATSVIVSGGYEDDEDSGYVITYTGHGGQDKNGKQCAHQKLEGGNLALERSMHYEVEVRVIRGFRYSGANSGKIYVYDGLYKVVDTWFDVGKSGFGVYKFKLVRMENQPEMGSTILKMAQMLKTKPLDVRPRGYLCLDLSGKKETMPVLLFNDIDNDQDPLHHQYLVSTVIPKYVFQVGSHS-GCECISGCSFDCLCILKNGGEFPYDNKGMLIKGKPLVFECGPQCRCPPTCRNRVSQKGVRSRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTRDQAQVISMVGDTLVYPSRFAERWAEWGELSQIYSDYVRPSYPAIPPLDFAMDVSSLRNVACYISHSNSPNVFAQFVLFDHNNVMFPRTMLFAMENIPPLRELSLDYGVAEEWTAKLAICN 663
M S++P FP+++ FP + + ++EPKLEPLDE + + +P SA N + + N + ++ A P E +++ SE++RISE+F SAF + V++ + R AIV VPEE + + Y RS ELVR+T+L ED++Y+R+IVRR RM++DSL V +++++++ G R++RGD KA+ +M+E GLWLNRDKRIVG+IPG+ +GDVFFFRMELCV+GLHGQ QAGIDYLP+++SSNGEP+ATS+IVSGGYEDDED+G VI YTGHGGQDK+ +QC HQKLEGGNLALERSMH+ VEVRVIRGF+Y G+ SGK+YVYDGLY++ D+WFDVGKSGFGVYK+KL+RM+NQ ++GS IL+ AQ L+ +PL VRP GY LD+S KKE +PV L+NDID+D +P++++YLV+T++P Y + G +S GC+C+SGC +DC C +KNGGEF YD G+L++GKPL+FECG CRCPPTCRNRVSQKGVR+RFEVFRSRETGWGVRSLDLIQAG+FICEYAGVVLTR+QAQV +M GD+LVYP+RFA+RWAEWG+LSQI+SDYVRP+YP+IPPLDFAMDVS +RNVACY+SHS+SPNV QFVL+DH+N++FP MLFAMENIPPLRELSLDYGVA+EWT KL ICN
Sbjct: 1 MGSLIP---FPEISLFPASISTATATTTTTTTAVVKIEPKLEPLDEPCQPHTEPLQSPYFSAPNLSFSLNSQPNTPFSDPYTEPNALTHVRANPSEENDISSEYHRISELFRSAFAQR--HGDVDVLDPDSR-----AIVPVPEENGVSTVDATSRRGYQQRSRELVRITDLGLEDQRYFRDIVRRTRMVYDSLRVFSMMEEEKRRGLG-LGRRSRGDLKASSVMKERGLWLNRDKRIVGSIPGVCVGDVFFFRMELCVVGLHGQSQAGIDYLPASQSSNGEPIATSIIVSGGYEDDEDTGDVIIYTGHGGQDKHSRQCVHQKLEGGNLALERSMHFGVEVRVIRGFKYEGSASGKVYVYDGLYRIHDSWFDVGKSGFGVYKYKLIRMDNQLQLGSAILRFAQNLRIRPLTVRPVGYFSLDISMKKEKVPVFLYNDIDHDHEPVYYEYLVTTILPPYAYHHGGNSTGCDCVSGCLYDCSCAMKNGGEFAYDQNGILVRGKPLIFECGTHCRCPPTCRNRVSQKGVRNRFEVFRSRETGWGVRSLDLIQAGSFICEYAGVVLTREQAQVFTMNGDSLVYPNRFADRWAEWGDLSQIFSDYVRPAYPSIPPLDFAMDVSRMRNVACYMSHSSSPNVLVQFVLYDHSNLLFPHLMLFAMENIPPLRELSLDYGVADEWTGKLPICN 672
BLAST of DCAR_027356 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3Y2P4 ((histone-lysine N-methyltransferase family member SUVH9-like {ECO:0000313|RefSeq:XP_016446473.1}))
HSP 1 Score: 863.988 bits (2231), Expect = 0.000e+0
Identity = 429/694 (61.82%), Postives = 529/694 (76.22%), Query Frame = 0
Match: A0A1S3Y2P4 ((histone-lysine N-methyltransferase family member SUVH9-like {ECO:0000313|RefSeq:XP_016446473.1}))
HSP 1 Score: 863.988 bits (2231), Expect = 0.000e+0
Identity = 429/694 (61.82%), Postives = 529/694 (76.22%), Query Frame = 0
Query: 1 MNSVLPSPRFPDLNGFPDTTAF-----------RVEPKLEPLDE----DLESPPGMFTPGSSARNRNPGFDLNANADGVASVGTSSGVSKGAAAPEASNVLSEFNRISEIFNSAFTS-----GGCEEEESVMEEEERN-ELAL----AIVAVPEE-----QAIVPKKIKYPPRSNELVRVTNLTEEDEQYYREIVRRARMIFDSLSVSAVVDDDRNIAGGTFDRKTRGDTKAAGLMRECGLWLNRDKRIVGAIPGIEIGDVFFFRMELCVLGLHGQVQAGIDYLPSNRSSNGEPVATSVIVSGGYEDDEDSGYVITYTGHGGQDKNGKQCAHQKLEGGNLALERSMHYEVEVRVIRGFRYSGANSGKIYVYDGLYKVVDTWFDVGKSGFGVYKFKLVRMENQPEMGSTILKMAQMLKTKPLDVRPRGYLCLDLSGKKETMPVLLFNDIDNDQDPLHHQYLVSTVIPKYVFQ-VGSHSGCECISGCSFDCLCILKNGGEFPYDNKGMLIKGKPLVFECGPQCRCPPTCRNRVSQKGVRSRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTRDQAQVISMVGDTLVYPSRFAERWAEWGELSQIYSDYVRPSYPAIPPLDFAMDVSSLRNVACYISHSNSPNVFAQFVLFDHNNVMFPRTMLFAMENIPPLRELSLDYGVAEEWTAKLAICN 663
M S++P F DLN P++T ++EPKLEPLDE DL++PP P + P F+ N + + S + + + + +NV SE+NRISE+F AF G E ++ R+ E+ L AIV V E + ++P++ KY RS+ELVRVT+L ED++Y+R+ VRR RM++DSL V A+ DD+ N+ G RKTRGD KA ++RE GLW+NRDKRIVGAIPG+ IGDVFFFRMELCV+GLHGQVQAGIDY+P+++SSN EP+ATSVIVSGGYEDD+D G VI YTGHGGQDK +QC HQKLE GNLALERSMHY +EVRVIRGF+Y G+ SGK+YVYDGLY++V+ WFDVGKSGFGVYK+KLVR+ENQ E+GS IL+ AQ L+ +PL RP GY+ LD+S KKE MPV LFNDID++ DP++ YL+ TV P YV+Q VGS +GCEC++GC +C C ++NGG+F YD G+L++GKPLVFECGP C+CPPTCRNRVSQKG+R RFEVFRSRETGWGVRSLDLIQAG+FICE+ GVVLTR+QAQ+ +M GD+LVYPSRF ERWAEWG+LSQIY DYVRP+YP+IPPLDFAMDVS +RNVACY+SHS+SPNV Q VL+DHN V FP MLFAMENIPPLRE+S+DYGVA+EWT KLAICN
Sbjct: 1 MGSLVP---FQDLNLQPESTNLTSNSPTPLITPKIEPKLEPLDEFTQADLQTPPLFSNPNT------PNFNCNFTPNSL-SHNLITTPEQNPSGSDGTNVYSEYNRISELFREAFAKRMQRYGDIEIVADPNNDDSRDVEMDLDNSRAIVPVNNEDNQVSEMVIPRR-KYQQRSSELVRVTDLKPEDQRYFRDAVRRTRMLYDSLRVLAMADDENNM-GVVPHRKTRGDLKACQVLREHGLWMNRDKRIVGAIPGVFIGDVFFFRMELCVVGLHGQVQAGIDYVPASQSSNREPIATSVIVSGGYEDDQDGGDVIIYTGHGGQDKLSRQCMHQKLECGNLALERSMHYGIEVRVIRGFKYEGSASGKVYVYDGLYRIVECWFDVGKSGFGVYKYKLVRIENQEELGSAILRFAQNLRLRPLVARPTGYVSLDISRKKENMPVFLFNDIDDNHDPVYFDYLLKTVFPPYVYQNVGSGNGCECVNGCVDNCFCAMRNGGQFAYDYNGILVRGKPLVFECGPHCQCPPTCRNRVSQKGLRHRFEVFRSRETGWGVRSLDLIQAGSFICEFTGVVLTREQAQIFTMNGDSLVYPSRFPERWAEWGDLSQIYPDYVRPAYPSIPPLDFAMDVSRMRNVACYMSHSSSPNVLVQPVLYDHNTVSFPHLMLFAMENIPPLREISIDYGVADEWTGKLAICN 682
BLAST of DCAR_027356 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1DZN1 ((histone-lysine N-methyltransferase family member SUVH9-like {ECO:0000313|RefSeq:XP_022157966.1}))
HSP 1 Score: 863.988 bits (2231), Expect = 0.000e+0
Identity = 419/661 (63.39%), Postives = 512/661 (77.46%), Query Frame = 0
Match: A0A6J1DZN1 ((histone-lysine N-methyltransferase family member SUVH9-like {ECO:0000313|RefSeq:XP_022157966.1}))
HSP 1 Score: 863.988 bits (2231), Expect = 0.000e+0
Identity = 419/661 (63.39%), Postives = 512/661 (77.46%), Query Frame = 0
Query: 23 RVEPKLEPLDE----------------DLESPPGMFTPGSSARNRNPGFDLNANADGVASVGTSSGVSKGAAAPEASNVLSEFNRISEIFNSAFTSGGCEEEESVMEEEERNELALAIVAVPEEQ---AIVPKKIKYPPRSNELVRVTNLTEEDEQYYREIVRRARMIFDSLSVSAVVDDDRNIAGGTFDRKTRGDTKAAGLMRECGLWLNRDKRIVGAIPGIEIGDVFFFRMELCVLGLHGQVQAGIDYLPSNRSSNGEPVATSVIVSGGYEDDEDSGYVITYTGHGGQDKNGKQCAHQKLEGGNLALERSMHYEVEVRVIRGFRYSGANSGKIYVYDGLYKVVDTWFDVGKSGFGVYKFKLVRMENQPEMGSTILKMAQMLKTKPLDVRPRGYLCLDLSGKKETMPVLLFNDIDNDQDPLHHQYLVSTVIPKYVF-QVGSHSGCECISGCSFDCLCILKNGGEFPYDNKGMLIKGKPLVFECGPQCRCPPTCRNRVSQKGVRSRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTRDQAQVISMVGDTLVYPSRFAERWAEWGELSQIYSDYVRPSYPAIPPLDFAMDVSSLRNVACYISHSNSPNVFAQFVLFDHNNVMFPRTMLFAMENIPPLRELSLDYGVAEEWTAKLAICN 663
++EPKLEP D+ L SPP F S + P D N + S+ +S + NV SEF RIS++F SAF G ++ + E + A AIV VPEE +V K +Y RS+ELVRVT+L ED++Y+R++VRR RMIFDSL V + +++++ R+ RGD +A+ LMRE GLWLNRDKRIVG+IPG+ IGD+FFFRMELCV+GLHGQ QAGIDY+P+++SSNGEP+ATSVIVSGGYEDDEDSG +I YTGHGGQDK +QC HQKLEGGNLALERSMHY +EVRVIRG +Y+G+ + KIYVYDGLY+++D WFDVGKSGFGVYK+KL+R++ Q EMGS+ILK A+ L+++PL +RP GYL LD+S KKE +PVLLFNDIDNDQ+PL+++YLV TV P + F Q GS +GC C+SGC DC C +KNGGEF YD G L++GKP++FECGP C+CPP CRNRVSQKG++ R EVFRSRETGWGVRSLDLI AGAFICEYAGVVLTR+QAQV SM GDTL+YP+RF++RWAEWG+LSQIYS+Y+RPSYP++PPLDFAMDVS +RNVACYISHS SPNV QFVLFDHNN+MFP MLFAMENIPPLRELS+DYGVA+EW+ KLAICN
Sbjct: 50 KLEPKLEPFDDLFQTPQTQPPQPVQQPFLSSPPSNFFSNSDFAH-TPFSDQNQTP-----ISQSASISS-----DKDNVYSEFYRISQLFRSAFGKGF----QNYGDAEVVDPDARAIVPVPEENQVSTVVVSKRRYDKRSSELVRVTDLGVEDQRYFRDVVRRTRMIFDSLRVLSTAEEEKSAG---LMRRLRGDLRASSLMRERGLWLNRDKRIVGSIPGVHIGDLFFFRMELCVVGLHGQAQAGIDYVPASQSSNGEPIATSVIVSGGYEDDEDSGDMIIYTGHGGQDKFSRQCMHQKLEGGNLALERSMHYGIEVRVIRGIKYAGSVASKIYVYDGLYRILDCWFDVGKSGFGVYKYKLLRIDGQAEMGSSILKFAETLRSRPLSLRPAGYLSLDISLKKEAVPVLLFNDIDNDQEPLYYEYLVRTVFPPFAFHQSGSGTGCSCVSGCVHDCFCAMKNGGEFGYDQNGFLVRGKPIIFECGPFCQCPPQCRNRVSQKGLKHRLEVFRSRETGWGVRSLDLIHAGAFICEYAGVVLTREQAQVFSMNGDTLIYPNRFSDRWAEWGDLSQIYSNYMRPSYPSVPPLDFAMDVSRMRNVACYISHSTSPNVLVQFVLFDHNNLMFPHLMLFAMENIPPLRELSIDYGVADEWSGKLAICN 692
BLAST of DCAR_027356 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9GGM9 ((Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing {ECO:0000313|EMBL:PIN04438.1}) (2.1.1.43 {ECO:0000313|EMBL:PIN04438.1}))
HSP 1 Score: 862.448 bits (2227), Expect = 0.000e+0
Identity = 419/671 (62.44%), Postives = 514/671 (76.60%), Query Frame = 0
Match: A0A2G9GGM9 ((Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing {ECO:0000313|EMBL:PIN04438.1}) (2.1.1.43 {ECO:0000313|EMBL:PIN04438.1}))
HSP 1 Score: 862.448 bits (2227), Expect = 0.000e+0
Identity = 419/671 (62.44%), Postives = 514/671 (76.60%), Query Frame = 0
Query: 10 FPDLNGFPDTTAF------RVEPKLEPLDEDLESPPGMFTPGSSARNRNPGFDLNANADGVASVGTSSGVSKGAAAPEAS----NVLSEFNRISEIFNSAFTSGGCEE--EESVMEEEERNELALAIVAVPEEQA----IVPK-KIKYPPRSNELVRVTNLTEEDEQYYREIVRRARMIFDSLSVSAVVDDDRNIAGGTFDRKTRGDTKAAGLMRECGLWLNRDKRIVGAIPGIEIGDVFFFRMELCVLGLHGQVQAGIDYLPSNRSSNGEPVATSVIVSGGYEDDEDSGYVITYTGHGGQDKNGKQCAHQKLEGGNLALERSMHYEVEVRVIRGFRYSGANSGKIYVYDGLYKVVDTWFDVGKSGFGVYKFKLVRMENQPEMGSTILKMAQMLKTKPLDVRPRGYLCLDLSGKKETMPVLLFNDIDNDQDPLHHQYLVSTVIPKYVFQVGSHSGCECISGCSFDCLCILKNGGEFPYDNKGMLIKGKPLVFECGPQCRCPPTCRNRVSQKGVRSRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTRDQAQVISMVGDTLVYPSRFAERWAEWGELSQIYSDYVRPSYPAIPPLDFAMDVSSLRNVACYISHSNSPNVFAQFVLFDHNNVMFPRTMLFAMENIPPLRELSLDYGVAEEWTAKLAICN 663
F DLN +PD A ++EPKLEPL+E + +S + AAAP + +V +EF RISE+F SAF E+ + +++ + + + A+ V+ PE Q I P KYP RS+ELVRVT+L +D +Y+R+++RR RM+FDSL V ++ +D+++ R+TRGD KA+ LMR GLWLNRDKRIVG IPG+ IGDVFFFRMELCV+GLHGQ QAGIDY+P+++SSNGEP+ATS+IVSGGYEDDED G VI YTGHGGQDKN KQ HQKLE GNLALERSM+Y VEVRVIRGF+Y G+ SGK+YVYDGLY++++TWFDVGKSGFGV+KFKLVR+ENQPEMGST +K A L+T+PL+VRP GY+ DLS KKET PV L+NDID D+DPL++ YL++TV P Y++ GS +GCEC+ GC +CLC +KNGGEF YD G+L++GKPL+FECGP CRCPP+CRNRV+QKG+R+RFEVFRSRETGWGVRSLDLIQAG+FICEYAG+VLTR+Q Q+ +M GD+L+YPSRFAERW EWG+LSQI+SDYV P+YP+IPPLDFAMDVS LRNVACYISHS+SPNVF Q VL DHNNV FPR MLFAMENIPP+RELSLDYGVA+E KLAICN
Sbjct: 8 FQDLNLYPDPPATSTPIIPKIEPKLEPLEEPPSP---------------------LGPPPGLHLSNASTIPDPAAAPSPTSSDADVYAEFYRISELFRSAFAQR-VEKFGDVAILPDSDPDSRAIVPVSNPETQVSDVVITPSGSRKYPTRSSELVRVTDLKPDDHRYFRDLIRRTRMLFDSLRVFSISEDEKHRDIMVPQRRTRGDLKASALMRHSGLWLNRDKRIVGDIPGVSIGDVFFFRMELCVVGLHGQPQAGIDYVPASQSSNGEPIATSIIVSGGYEDDEDQGDVIVYTGHGGQDKNNKQVVHQKLECGNLALERSMNYGVEVRVIRGFKYEGSISGKVYVYDGLYRIIETWFDVGKSGFGVFKFKLVRIENQPEMGSTGMKFAGSLRTRPLEVRPNGYITFDLSRKKETYPVFLYNDIDGDRDPLNYDYLITTVFPPYLYSSGSTTGCECVGGCMDECLCSMKNGGEFAYDMNGILVRGKPLIFECGPHCRCPPSCRNRVTQKGLRNRFEVFRSRETGWGVRSLDLIQAGSFICEYAGIVLTREQIQLFTMTGDSLIYPSRFAERWKEWGDLSQIFSDYVCPTYPSIPPLDFAMDVSKLRNVACYISHSSSPNVFVQLVLHDHNNVCFPRLMLFAMENIPPMRELSLDYGVADEGMGKLAICN 656
BLAST of DCAR_027356 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834GDT8 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7132341.1}))
HSP 1 Score: 862.448 bits (2227), Expect = 0.000e+0
Identity = 421/677 (62.19%), Postives = 519/677 (76.66%), Query Frame = 0
Match: A0A834GDT8 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7132341.1}))
HSP 1 Score: 862.448 bits (2227), Expect = 0.000e+0
Identity = 421/677 (62.19%), Postives = 519/677 (76.66%), Query Frame = 0
Query: 1 MNSVLPSPRFPDLNGFPDTTAF----------RVEPKLEPLDEDLESPPGMFTPGSSARNRNPGFDLNANADGVASVGTSSGVSKGAAAPEASNVLSEFNRISEIFNSAFTSGGCEEEESVMEEEERNELALAIVAVPEEQ---AIVPKKIKYPPRSNELVRVTNLTEEDEQYYREIVRRARMIFDSLSVSAVVDDDRNIAGGTFDRKTRGDTKAAGLMRECGLWLNRDKRIVGAIPGIEIGDVFFFRMELCVLGLHGQVQAGIDYLPSNRSSNGEPVATSVIVSGGYEDDEDSGYVITYTGHGGQDK-NGKQCAHQKLEGGNLALERSMHYEVEVRVIRGFRYSGANSGKIYVYDGLYKVVDTWFDVGKSGFGVYKFKLVRMENQPEMGSTILKMAQMLKTKPLDVRPRGYLCLDLSGKKETMPVLLFNDIDNDQDPLHHQYLVSTVIPKYVFQVGSHSGCECISGCSFDCLCILKNGGEFPYDNKGMLIKGKPLVFECGPQCRCPPTCRNRVSQKGVRSRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTRDQAQVISMVGDTLVYPSRFAERWAEWGELSQIYSDYVRPSYPAIPPLDFAMDVSSLRNVACYISHSNSPNVFAQFVLFDHNNVMFPRTMLFAMENIPPLRELSLDYGVAEEWTAKLAICN 663
M S++P FPDLN FPD ++EPKLEP D+ PG P +S N NP D +NV SEFNRISE+F +AF + ++ + LAIVAVP++ A+VP K ++ PRS+ELVRV +L +D++Y+R++VR+ RMI+DSL V A ++ R G RGD KAA +MR+ GLWLNRDKRIVG+IPG+ +GD+FFFRMELCV+GLHGQ QAGIDY+ ++ SSNGEP+ATSVIVSGGYEDDED+G VI YTGHGGQDK + +QCAHQKLEGGNL LERSMHY +EVRVIRG RY+G+ SGK+YVYDGLY++ +WFDVGKSGFGVYKFKLVRMENQPEMGS++L++A+ L+T+PL VRP GY+ LD+S KE +PVLL+NDID++ DP++ +Y+ + V P +V+Q G+ +GC+CISGC+ DCLC KNGGEF YD G+LI+GKPL+FECG CRCPP+CRNRVSQ GVR+RFEVFRSRETGWGVRSLDLIQAG+FICEYAGVVLTR+QAQ+ +M GD+LVYP+RFA+RW EWG+LSQI+SDYVRP +P+IPPLDFAMDVS +RNVACYISHS+SPNV Q VL+DHNN++FP MLFAMENIPPLRELS+DYGVA+EWT KL ICN
Sbjct: 1 MGSLIP---FPDLNSFPDPATTTVTATATIIPKLEPKLEPFDD---PQPGFTQPLNSIPNPNPNHSPQTPLD-------------------ETNVYSEFNRISELFRTAFAKQNVDVPNPSADDVV-DPNPLAIVAVPDQNNQVAVVPPKRRHQPRSSELVRVLDLGLDDQRYFRDLVRKTRMIYDSLRVFA--EEKRRALGLERRTAARGDLKAATVMRDRGLWLNRDKRIVGSIPGVYVGDLFFFRMELCVVGLHGQSQAGIDYVTASHSSNGEPIATSVIVSGGYEDDEDAGDVIIYTGHGGQDKTHSRQCAHQKLEGGNLGLERSMHYGIEVRVIRGMRYAGSPSGKVYVYDGLYRIFYSWFDVGKSGFGVYKFKLVRMENQPEMGSSVLRLAKSLRTEPLSVRPVGYVSLDISMNKENVPVLLYNDIDSEHDPMYFEYIAAVVFPPHVYQGGNGNGCDCISGCTDDCLCTSKNGGEFAYDQNGILIRGKPLIFECGTNCRCPPSCRNRVSQNGVRNRFEVFRSRETGWGVRSLDLIQAGSFICEYAGVVLTREQAQLFTMNGDSLVYPNRFADRWTEWGDLSQIFSDYVRPEHPSIPPLDFAMDVSRMRNVACYISHSSSPNVLVQLVLYDHNNLLFPHIMLFAMENIPPLRELSIDYGVADEWTGKLRICN 649
BLAST of DCAR_027356 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6JWA9 ((Histone-lysine n-methyltransferase family member suvh9 {ECO:0000313|EMBL:OIT22042.1}))
HSP 1 Score: 862.062 bits (2226), Expect = 0.000e+0
Identity = 426/686 (62.10%), Postives = 522/686 (76.09%), Query Frame = 0
Match: A0A1J6JWA9 ((Histone-lysine n-methyltransferase family member suvh9 {ECO:0000313|EMBL:OIT22042.1}))
HSP 1 Score: 862.062 bits (2226), Expect = 0.000e+0
Identity = 426/686 (62.10%), Postives = 522/686 (76.09%), Query Frame = 0
Query: 9 RFPDLNGFPDTTAF-----------RVEPKLEPLDE----DLESPPGMFTPGSSARNRNPGFDLNANADGVASVGTSSGVSKGAAAPEASNVLSEFNRISEIFNSAFTS-----GGCE-----EEESVMEEEERNELALAIVAVPEE-----QAIVPKKIKYPPRSNELVRVTNLTEEDEQYYREIVRRARMIFDSLSVSAVVDDDRNIAGGTFDRKTRGDTKAAGLMRECGLWLNRDKRIVGAIPGIEIGDVFFFRMELCVLGLHGQVQAGIDYLPSNRSSNGEPVATSVIVSGGYEDDEDSGYVITYTGHGGQDKNGKQCAHQKLEGGNLALERSMHYEVEVRVIRGFRYSGANSGKIYVYDGLYKVVDTWFDVGKSGFGVYKFKLVRMENQPEMGSTILKMAQMLKTKPLDVRPRGYLCLDLSGKKETMPVLLFNDIDNDQDPLHHQYLVSTVIPKYVFQ-VGSHSGCECISGCSFDCLCILKNGGEFPYDNKGMLIKGKPLVFECGPQCRCPPTCRNRVSQKGVRSRFEVFRSRETGWGVRSLDLIQAGAFICEYAGVVLTRDQAQVISMVGDTLVYPSRFAERWAEWGELSQIYSDYVRPSYPAIPPLDFAMDVSSLRNVACYISHSNSPNVFAQFVLFDHNNVMFPRTMLFAMENIPPLRELSLDYGVAEEWTAKLAICN 663
+F DLN P++T ++EPKLEPLDE DL++PP P + N N N +S+ T G+ + +NV SE+NRISE+F AF G E E + + E + + AIV V E + ++P++ KY RS+ELVRVT+L ED++Y+R+ VRR RM++DSL V A+ DD+ N+ G RKTRGD KA ++RE GLW+NRDKRIVGAIPG+ IGDVFFFRMELCV+GLHGQVQAGIDY+P+++SSN EP+ATSVIVSGGYEDD+D G VI YTGHGGQDK +QC HQKLE GNLALERSMHY +EVRVIRGF+Y G+ SGK+YVYDGLY++V+ WFDVGKSGFGVYK+KLVR+ENQ E+GS IL+ AQ L+ +PL RP GY+ LD+S KKE +PV LFNDID++ DP + YL+ TV P YV+Q VGS +GCEC++GC +C C ++NGG+F YD G+L++GKPLVFECGP C+CPPTCRNRVSQKG+R RFEVFRSRETGWGVRSLDLIQAG+FICE+ GVVLTR+QAQ+ +M GD+LVYPSRF ERWAEWG+LSQIY DYVRP+YP+IPPLDFAMDVS +RNVACY+SHS+SPNV Q VL+DHN V FP MLFAMENIPPLRE+S+DYGVA+EWT KLAICN
Sbjct: 6 QFQDLNLQPESTNLTSNSRTPLITPKIEPKLEPLDEFTQADLQTPPLFSNPNTPNFNSN----FTPNPLSHSSITTPEQNPSGS---DGTNVYSEYNRISELFREAFAKRMQRYGDIEIVADPENDDTRDIEAELDNSRAIVPVNNEDNQISEMVIPRR-KYQQRSSELVRVTDLKPEDQRYFRDAVRRTRMLYDSLRVLAMADDENNM-GVVPHRKTRGDLKACQVLREHGLWMNRDKRIVGAIPGVFIGDVFFFRMELCVVGLHGQVQAGIDYVPASQSSNREPIATSVIVSGGYEDDQDGGDVIIYTGHGGQDKLSRQCMHQKLECGNLALERSMHYGIEVRVIRGFKYEGSASGKVYVYDGLYRIVECWFDVGKSGFGVYKYKLVRIENQEELGSAILRFAQNLRIRPLVARPAGYVSLDISRKKENVPVFLFNDIDDNHDPAYFDYLLKTVFPPYVYQNVGSGNGCECVNGCVDNCFCAMRNGGQFAYDYNGILVRGKPLVFECGPHCQCPPTCRNRVSQKGLRHRFEVFRSRETGWGVRSLDLIQAGSFICEFTGVVLTREQAQIFTMNGDSLVYPSRFPERWAEWGDLSQIYPDYVRPAYPSIPPLDFAMDVSRMRNVACYMSHSSSPNVLVQPVLYDHNTVSFPHLMLFAMENIPPLREISIDYGVADEWTGKLAICN 682
| Match Name | Stats | Description |
|---|---|---|
| A0A5J5C1T0 | E-Value: 0.000e+0, PID: 65.18 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8548... [more] |
| A0A2J6MGK1 | E-Value: 0.000e+0, PID: 63.73 | (Uncharacterized protein {ECO:0000313|EMBL:PLY9872... [more] |
| A0A5B7AY28 | E-Value: 0.000e+0, PID: 64.11 | (Putative histone H3-K9 methyltransferase, plant {... [more] |
| A0A1U7YEE5 | E-Value: 0.000e+0, PID: 62.10 | (histone-lysine N-methyltransferase family member ... [more] |
| A0A5J5AC06 | E-Value: 0.000e+0, PID: 60.91 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8527... [more] |
| A0A1S3Y2P4 | E-Value: 0.000e+0, PID: 61.82 | (histone-lysine N-methyltransferase family member ... [more] |
| A0A6J1DZN1 | E-Value: 0.000e+0, PID: 63.39 | (histone-lysine N-methyltransferase family member ... [more] |
| A0A2G9GGM9 | E-Value: 0.000e+0, PID: 62.44 | (Histone H3 (Lys9) methyltransferase SUV39H1/Clr4,... [more] |
| A0A834GDT8 | E-Value: 0.000e+0, PID: 62.19 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7132... [more] |
| A0A1J6JWA9 | E-Value: 0.000e+0, PID: 62.10 | (Histone-lysine n-methyltransferase family member ... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |