Resource Type:
Polypeptide
Name:
DCAR_026130
Identifier:
DCAR_026130.mRNA-protein
Sequence:
MGVANAWATGHSVPVPHIRPPQSCLNSHKFLSLRKLNYLLGWSCSSVPRN
PSWGIGSRVVKQQVFNCRCSGDGNGGVGDRNVSTSNFQLEDAIEKEDFQE
AAKLKIAIKEATSKDSIAEIMSELKNAIDEERYHEASRLCRSTGSGLVGW
WVGYSKDSDDPFGKLIHITPGVGRFVGKTFSPRQLVTASPGTPLFEIFVV
KDVEETYTMQVVFLKRIKGSTTKSTRSPTSKSTKLPSEDDEDTSVVDVEV
NEDKPEKGNEKSMTFEGVTEDGLRSVINFLKDKIPELKVKVTYVDESDDE
VIEDSDSLKQIMEENDENSVLVESSEDESSNLDDIQPDQFSLGGAGNAVE
DEKNLDMMKLFVGGILHNKEESPSKDEYMRVPGEIKDMERDSFLLHVPVG
KLGRNDSANFLPNEELAAISAKGASDLMPPDVAKAFFGANKVSPRVSRDV
REIVKLAASQAQKKEKLSEYTSFSRINTSNGDLDPFEGLYVGAFGPYGTE
VVQLRRKYGNWNSTSDSEESSNIDFFEYVEAVKLTGDLNVPGGQVTFRVK
VGQGNRLSNRGMYPDELGVVASYKGQGRIADFGFKNPKWVEGELLQLNGR
GMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE*
Sequence Length:
634
Sequence Checksum:
659a6d5355b8b227f9790d216bdfb84c
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_026130, derives from mRNA, DCAR_026130. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_026130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_026130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6RSE4 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 829.706 bits (2142), Expect = 0.000e+0
Identity = 420/662 (63.44%), Postives = 520/662 (78.55%), Query Frame = 0
Match: A0A5N6RSE4 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 829.706 bits (2142), Expect = 0.000e+0
Identity = 420/662 (63.44%), Postives = 520/662 (78.55%), Query Frame = 0
Query: 1 MGVANAWATGHSVPVPHIRPPQSC---LNSHKFLSLRKLNYLLGWSCSSVPRNPSWGIGSRVVKQQVFNCRCSGDGNGGVGDRNVSTS-------------------------NFQLEDAIEKEDFQEAAKLKIAIKEATSKDSIAEIMSELKNAIDEERYHEASRLCRSTGSGLVGWWVGYSKDSDDPFGKLIHITPGVGRFVGKTFSPRQLVTASPGTPLFEIFVVKDVEETYTMQVVFLKRIKGSTTKSTRSPTSKSTKLPSEDD-EDTSVVDVEVNEDKPEKGNEKSMTFEGVTEDGLRSVINFLKDKIPELKVKVTYVDESDDEVIEDSDSLKQIMEENDENSVLVESSEDESSNLDDIQPDQFSLGGAGNAVEDEKNLDMMKLFVGGILHNKEESPSKDEYMRVPGEIKDMERDSFLLHVPVGKLGRNDSANFLPNEELAAISAKGASDLMPPDVAKAFFGANKVSPRVSRDVREIVKLAASQAQKKEKLSEYTSFSRINTSNGDLDPFEGLYVGAFGPYGTEVVQLRRKYGNWNSTSDSEESSNIDFFEYVEAVKLTGDLNVPGGQVTFRVKVGQGNRLSNRGMYPDELGVVASYKGQGRIADFGFKNPKWVEGELLQLNGRGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE 633
M VA+AW G ++PVP +RP C S K+ S LN+ LGW CS ++ + SR K CRCS + + + N+S+S FQLEDAIEKEDFQEAAKLK+AI EATSKD+++EIMS+LK AI+EE YH+ASRLCR TGSGLVGWWVGYSKDSDDPFG+LI ITPGVGRFVG+++SPRQLVTA+PGTPLFEIFVVKD ++TY MQVV+L+R KG++T S+ SP SK TK PS + E+ SVV ++ NE K E+ EK EGVTE+G++SVINFLK+KIP LKVKV V+ S+ EV EDSDSLKQ+M+E++E + E+SED NLD+IQPD+ +LG +A EDEK+LDM KLF+GG++HN E++P+KDEY+R+P EIKDMERDSF+LH+P L + + + ++AA++A+G S+LMPPDVAKAF+ A+KVS +VSR+VREIVKLA SQAQK+ +LSEYT+F+RI TS GDLDPF GLYVGAFGPYGTEVVQLRRK+G+WN +D ++SS+++FFEYVEAVKLTGDLNVP GQVTFR K+G+GNR S+RGMYPDELGVVASYKGQGRIA+FGF+NP+WV+GELLQLNG+G+GPYVKGADLGFLYVVPEQSFLVLFNRLKLP+
Sbjct: 52 MVVAHAWGVGQAIPVPQLRPFFYCCADFQSKKYKS--NLNFFLGWGCSIQTKHAIFSNKSR--KNSSLPCRCSNN----IHNTNISSSLEWDWNRWNRHFSEIEQAESFASVLKFQLEDAIEKEDFQEAAKLKMAIAEATSKDTVSEIMSQLKRAIEEECYHDASRLCRYTGSGLVGWWVGYSKDSDDPFGRLIRITPGVGRFVGRSYSPRQLVTAAPGTPLFEIFVVKDTDKTYVMQVVYLQRAKGNSTNSS-SP-SKLTKDPSTSEVENESVVGIQENEGKSERTEEKGTNIEGVTEEGIKSVINFLKEKIPGLKVKVMNVNLSE-EVTEDSDSLKQLMQEDNEKTGSTENSEDGVGNLDEIQPDEVTLGEDSDASEDEKDLDM-KLFIGGVVHNNEDTPTKDEYVRLPAEIKDMERDSFVLHIPGRSLDHDAVESKVSRVKVAALAAQGVSELMPPDVAKAFWSADKVSSKVSRNVREIVKLAVSQAQKRSRLSEYTTFNRITTSRGDLDPFSGLYVGAFGPYGTEVVQLRRKFGHWNGGNDEDKSSDVEFFEYVEAVKLTGDLNVPAGQVTFRAKIGRGNRASSRGMYPDELGVVASYKGQGRIAEFGFRNPQWVDGELLQLNGKGIGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 701
BLAST of DCAR_026130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7B0J6 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 820.076 bits (2117), Expect = 0.000e+0
Identity = 423/657 (64.38%), Postives = 516/657 (78.54%), Query Frame = 0
Match: A0A5B7B0J6 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 820.076 bits (2117), Expect = 0.000e+0
Identity = 423/657 (64.38%), Postives = 516/657 (78.54%), Query Frame = 0
Query: 1 MGVANAWATGHSVPVPHIRPPQSCLNSHKFL-SLRKLNYLLG---WSCSSVPRNPSWGIGSRVVKQQVFNCRCSG---DGNGGVGDRN---------------VSTSNFQLEDAIEKEDFQEAAKLKIAIKEATSKDSIAEIMSELKNAIDEERYHEASRLCRSTGSGLVGWWVGYSKDSDDPFGKLIHITPGVGRFVGKTFSPRQLVTASPGTPLFEIFVVKDVEETYTMQVVFLKRIKGS-TTKSTRSPTSKSTKLPSEDD-EDTSVVDVEVNEDKPEKGNEKSMTFEGVTEDGLRSVINFLKDKIPELKVKVTYVDESDDEVIEDSDSLKQIMEENDENSVLVESSEDESSNLDDIQPDQFSLGGAGNAVEDEKNLDMMKLFVGGILHNKEESPSKDEYMRVPGEIKDMERDSFLLHVPVGKLGRNDSANFLPNEELAAISAKGASDLMPPDVAKAFFGANKVSPRVSRDVREIVKLAASQAQKKEKLSEYTSFSRINTSNGDLDPFEGLYVGAFGPYGTEVVQLRRKYGNWNSTSDSEESSNIDFFEYVEAVKLTGDLNVPGGQVTFRVKVGQGNRLSNRGMYPDELGVVASYKGQGRIADFGFKNPKWVEGELLQLNGRGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE 633
M VANAW GHSVP+P + S + F + L ++LG + S+ RN K +CRCS D + D N S FQLED IEKEDFQEAAKLK AI+EATSKDSIAEIM +LKNAI+EERY++AS+LCRSTGSGLVGWWVG SKDSDDPFG+L+ ITPGVGRFVG+++SPRQLVTA+PGTPLFEIFVVKD ++TY MQVVFL+R KG+ T ++ S SK TK PS + E+ SV+D + NE+K EK EKS+ EG TE+G+RSVINFLK+KIPELKVKV ++ ++ EV ED+DS+KQ+M+E DE+S+ E+SEDE+SNLD+I+ D+ +LGG G+ EDEKNLDM KLF+GG+LHNKE++P+KDEY+R+P EIKDMERDSF+LHVP + + ++AAI+A+G S+LMPP+VAKAF ++K S +VSR+VREI+KLA SQAQK+++LSEYT FSRI TS GD+DPF+GLYVGAFGPYGTEVVQLRRKYGNW D+E+SS+++FFEYVEAVKLTGDLNVP G+VTFR K+G+G+RLSNRGMYPDELGVVASYKGQGRIA+FGF+NPKWVEGELLQLNG+GMGPYVKGADLGFLYVVPEQSFLVLFNRLKLP+
Sbjct: 1 MAVANAWGMGHSVPMPQFKHSHSSSSFDCFAKNSVNLWFILGRGRIAHKSLLRNR---------KNSKLSCRCSANSIDNSSSEWDWNRWTRHFSEIEQADSFASVLKFQLEDVIEKEDFQEAAKLKKAIEEATSKDSIAEIMYQLKNAIEEERYNDASKLCRSTGSGLVGWWVGCSKDSDDPFGRLMRITPGVGRFVGRSYSPRQLVTAAPGTPLFEIFVVKDADDTYVMQVVFLQRAKGNLTNSTSSSSNSKPTKGPSTAEIENASVLDTKGNENKAEKSEEKSINIEGATEEGIRSVINFLKEKIPELKVKVMKINVAE-EVREDNDSVKQLMQEEDESSMSGENSEDEASNLDEIESDRVALGGDGDGTEDEKNLDM-KLFIGGVLHNKEDTPTKDEYVRLPAEIKDMERDSFVLHVPTRSQDHDAEESIASKVKVAAIAAQGVSELMPPEVAKAFLSSDKASSKVSRNVREIIKLAVSQAQKRDRLSEYTHFSRITTSKGDIDPFDGLYVGAFGPYGTEVVQLRRKYGNWIGGDDTEKSSDMEFFEYVEAVKLTGDLNVPAGEVTFRAKIGRGSRLSNRGMYPDELGVVASYKGQGRIAEFGFRNPKWVEGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 646
BLAST of DCAR_026130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BIX2 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 817.765 bits (2111), Expect = 0.000e+0
Identity = 419/653 (64.17%), Postives = 507/653 (77.64%), Query Frame = 0
Match: A0A5J5BIX2 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 817.765 bits (2111), Expect = 0.000e+0
Identity = 419/653 (64.17%), Postives = 507/653 (77.64%), Query Frame = 0
Query: 1 MGVANAWATGHSVPVPHIRPPQSCLNSHKFLSLRKLNYLLGWSCSSVPRNPSWGIGSRVVKQQVFNCRCSG---DGNGGVGDRN---------------VSTSNFQLEDAIEKEDFQEAAKLKIAIKEATSKDSIAEIMSELKNAIDEERYHEASRLCRSTGSGLVGWWVGYSKDSDDPFGKLIHITPGVGRFVGKTFSPRQLVTASPGTPLFEIFVVKDVEETYTMQVVFLKRIKGSTTKSTRSPTS-KSTKLPSEDD-EDTSVVDVEVNEDKPEKGNEKSMTFEGVTEDGLRSVINFLKDKIPELKVKVTYVDESDDEVIEDSDSLKQIMEENDENSVLVESSEDESSNLDDIQPDQFSLGGAGNAVEDEKNLDMMKLFVGGILHNKEESPSKDEYMRVPGEIKDMERDSFLLHVPVGKLGRNDSANFLPNEELAAISAKGASDLMPPDVAKAFFGANKVSPRVSRDVREIVKLAASQAQKKEKLSEYTSFSRINTSNGDLDPFEGLYVGAFGPYGTEVVQLRRKYGNWNSTSDSEESSNIDFFEYVEAVKLTGDLNVPGGQVTFRVKVGQGNRLSNRGMYPDELGVVASYKGQGRIADFGFKNPKWVEGELLQLNGRGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE 633
M VAN W G SVP+P + S + N + W R + R CRCS D + D N S FQLEDAIEKEDFQEAAKLK AI EATSKDSIAEIM +LKNAI+EERY++AS+LCR TGSGLVGWWVG SKDSDDPFG+LI ITPGVGRFVG+++SPRQLVTA+PG+PLFEIFVVKD ++TY MQVVFL+R KG++T ST S ++ K TK PS + E+ SVVD + NE+K EK EK++ EG TE+G+RSVINFLK+KIPELKVKV ++ +EV ED++S+KQ+M+ENDE+++ E+SEDE+SNLD+I+ D+ +LGG + EDEKNLDM KLF+GG+LHNKE++P+KDEY+R+P EIKDMERDSFLLHVP + + + ++AA++A+G S+LMPPDVAKAF ++K S +VSR+VREI+KLA SQAQK+++LSEYT FSRI TS GD+DPF+GLYVGAFGPYGTEVVQLRRKYGNWN D ++SS+++FFEYVEAVKLTGDLNVP G+VTFR K+G+GNRLSNRGMYPDELGVVASYKGQGRIA+FGF+NPKWVEGELLQLNG+GMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE
Sbjct: 1 MAVANGWGMGRSVPMPQFKHSHSSSSPSPSFDCFSKNSVNQWFILGRGRIAHKSL-LRNRNNSKLCCRCSANNIDNSSSEWDWNRWTRHFSEIEQAESFASVLKFQLEDAIEKEDFQEAAKLKKAIAEATSKDSIAEIMYQLKNAIEEERYNDASKLCRGTGSGLVGWWVGCSKDSDDPFGRLIRITPGVGRFVGRSYSPRQLVTAAPGSPLFEIFVVKDSDDTYVMQVVFLQRAKGNSTNSTSSSSNSKPTKGPSTAEIENASVVDTKGNENKAEKSEEKTLNIEGATEEGIRSVINFLKEKIPELKVKVMKIN-VPEEVAEDNNSVKQLMQENDESTMPGENSEDEASNLDEIESDRVALGGDSDGTEDEKNLDM-KLFIGGVLHNKEDTPTKDEYVRLPAEIKDMERDSFLLHVPTKSQDHDAEESIVSKVKVAALAAQGVSELMPPDVAKAFLSSDKASSKVSRNVREIIKLAVSQAQKRDRLSEYTHFSRITTSTGDIDPFDGLYVGAFGPYGTEVVQLRRKYGNWNGVDDEDKSSDVEFFEYVEAVKLTGDLNVPAGEVTFRAKIGKGNRLSNRGMYPDELGVVASYKGQGRIAEFGFRNPKWVEGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE 650
BLAST of DCAR_026130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2MNM6 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 809.29 bits (2089), Expect = 0.000e+0
Identity = 407/655 (62.14%), Postives = 510/655 (77.86%), Query Frame = 0
Match: A0A7N2MNM6 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 809.29 bits (2089), Expect = 0.000e+0
Identity = 407/655 (62.14%), Postives = 510/655 (77.86%), Query Frame = 0
Query: 1 MGVANAWATGHSVPVPHIRPPQSCLNSHKFLSLRKLNYLLGWSCSSVPRNPSWGIGSRVVKQQVFNCRCSG-----------DGNGGVGDRN----------VSTSNFQLEDAIEKEDFQEAAKLKIAIKEATSKDSIAEIMSELKNAIDEERYHEASRLCRSTGSGLVGWWVGYSKDSDDPFGKLIHITPGVGRFVGKTFSPRQLVTASPGTPLFEIFVVKDVEETYTMQVVFLKRIKGSTTKSTRSPTSKSTKLPSEDD-EDTSVVDVEVNEDKPEKGNEKSMTFEGVTEDGLRSVINFLKDKIPELKVKVTYVDESDDEVIEDSDSLKQIMEENDENSVLVESSEDESSNLDDIQPDQFSLGGAGNAVEDEKNLDMMKLFVGGILHNKEESPSKDEYMRVPGEIKDMERDSFLLHVPVGKLGRNDSANFLPNEELAAISAKGASDLMPPDVAKAFFGANKVSPRVSRDVREIVKLAASQAQKKEKLSEYTSFSRINTSNGDLDPFEGLYVGAFGPYGTEVVQLRRKYGNWNSTSDSEESSNIDFFEYVEAVKLTGDLNVPGGQVTFRVKVGQGNRLSNRGMYPDELGVVASYKGQGRIADFGFKNPKWVEGELLQLNGRGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE 633
M VAN W G +P+ + P + S L++++GWS + + ++ K F C + + +R+ S FQLEDAIEKEDFQEAAKLK+AI EATSKDS+AEIMS+LK+A+DEERYH+ASRLCR TGSGLVGWWVGYSKDSDDPFG++I ITPGVGRFV ++FSPRQLVTA+PGTPLFEIFVVKD +ETY MQVV L+R KG++T S SP SK TK PS + E+ SVVDV+ NE K E+ +K EGVTE+G++SVINFLK+KIP LKVKV V+ ++ EVI+DSDS+KQ+M+E++E + E+ EDE NLD+IQPD+ ++GG +A +DEK+LDM KLF+GG++HN +++PSKDEY+R+P EIKDMERDSF+LH+P L ++ + + ++AA++A+G S+LMP DVAKAF+GA+K+SP+VSR+VREIVKLA SQAQK+ LSEYT+F+RI TS GDLDPF GLYVGAFGPYGTEVVQL+RKYG+WN D ++SS+++FFEYVEAVKLTGDLNVP GQVTFR K+G+GNR SNRGMYPDELGVVAS+KGQGRIA+FGF+NP+WV+GELLQLNG+G+GPYVKGADLGFLYVVPEQSFLVLFNRLKLP+
Sbjct: 1 MSVANTWGVGQGIPMAQLGPSLCFSHFSSVKSKTHLSFVVGWSWGHSVQTKNASFNNKTRKNSSFRCSNCSNSNNTNTSSSLEWDWNRWNRHFSEIEQAESFASVLKFQLEDAIEKEDFQEAAKLKMAIAEATSKDSVAEIMSQLKHAVDEERYHDASRLCRYTGSGLVGWWVGYSKDSDDPFGRIIRITPGVGRFVCRSFSPRQLVTAAPGTPLFEIFVVKDTDETYVMQVVCLQRAKGNSTNS--SPASKLTKDPSTSEVENESVVDVQENEVKAERTEDKGTNTEGVTEEGIKSVINFLKEKIPGLKVKVMNVNVAE-EVIKDSDSVKQLMQEDNEKAGSTENPEDEVGNLDEIQPDEVTVGGGSDASDDEKDLDM-KLFIGGVVHNSDDTPSKDEYVRLPAEIKDMERDSFVLHIPGRSLDHDNGESKVSRVKVAALAAQGVSELMPSDVAKAFWGADKISPKVSRNVREIVKLAVSQAQKRSILSEYTTFNRITTSRGDLDPFSGLYVGAFGPYGTEVVQLQRKYGHWNGGDDEDKSSDMEFFEYVEAVKLTGDLNVPAGQVTFRAKIGRGNRSSNRGMYPDELGVVASFKGQGRIAEFGFRNPQWVDGELLQLNGKGIGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 651
BLAST of DCAR_026130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7SHT0 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 802.357 bits (2071), Expect = 0.000e+0
Identity = 414/662 (62.54%), Postives = 497/662 (75.08%), Query Frame = 0
Match: D7SHT0 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 802.357 bits (2071), Expect = 0.000e+0
Identity = 414/662 (62.54%), Postives = 497/662 (75.08%), Query Frame = 0
Query: 1 MGVANAWATGHSVPVPHIRPPQSC---LNSHKFLSLRKLNYLLGWSC-SSVPRNPSWGIGSRVVKQQVFNCRCSGDGNGGV------------------------GDRNVSTSNFQLEDAIEKEDFQEAAKLKIAIKEATSKDSIAEIMSELKNAIDEERYHEASRLCRSTGSGLVGWWVGYSKDSDDPFGKLIHITPGVGRFVGKTFSPRQLVTASPGTPLFEIFVVKDVEETYTMQVVFLKRIKGSTTKSTRSPTSKSTK-LPSEDDEDTSVVDVEVNEDKPEKGNEKSMTFEGVTEDGLRSVINFLKDKIPELKVKVTYVDESDDEVIEDSDSLKQIMEENDENSVLVESSEDESSNLDDIQPDQFSLGGAGNAVEDEKNLDMMKLFVGGILHNKEESPSKDEYMRVPGEIKDMERDSFLLHVPVGKLGRNDSANFLPNEELAAISAKGASDLMPPDVAKAFFGANKVSPRVSRDVREIVKLAASQAQKKEKLSEYTSFSRINTSNGDLDPFEGLYVGAFGPYGTEVVQLRRKYGNWNSTSDSEESSNIDFFEYVEAVKLTGDLNVPGGQVTFRVKVGQGNRLSNRGMYPDELGVVASYKGQGRIADFGFKNPKWVEGELLQLNGRGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE 633
M + NAW GH + RP +SC L S K S KL + GW SV P+ R K CRCS + + S FQLEDAIE+EDF+EAAKLK+AI EA S DS+ EIMS+LKNAIDEERYH+AS+LCR T SGLVGWWVG S DSDDPFG+L+HITPGVGRFVG+++SPRQLVTAS GTPLFEIFVVKD +E Y MQVV+L+R KGST T S TS+ TK S + E SVVD++ NE K EK EK ++ EG TE+G++SVINFLKDKIPELKVKV ++ DEVIED DS+KQ M+E+DE + E SEDE+ +LD IQPD+ +LGG N ED +NLDM KLF+GG+LHNKE++ SKD+Y+R P EI+DMERDSF+LHVPV + N + ++AAI+A+G S+LMP +VAKAF+ A+KVSP+VSRDVREIVKLA SQAQK+ +LSE+TSFSRI TS G LDPF+GLYVGAFGPYGTEVVQLR K+GNWN D+++SS+++FFEYVEAVKLTGDLNVP GQVTFR K+G+G+R+ NRGMYPDELGVVASY GQGRIA+FGF+NP+WV+GELLQL+G+GMGPYV+GADLGFLYVVPEQSFLVLFNRLKLPE
Sbjct: 1 MALTNAWGMGHIASMTQFRPSKSCSDALLSSKRSSNLKLGFFFGWGLGCSVYHKPA---DFRPRKSPNLCCRCSNNPTIANNGNSSSSSGWDWNQWSRHFSEIEQAESFASVLKFQLEDAIEREDFEEAAKLKMAIAEAMSMDSVTEIMSQLKNAIDEERYHDASKLCRHTASGLVGWWVGCSADSDDPFGRLVHITPGVGRFVGRSYSPRQLVTASAGTPLFEIFVVKDSDEKYIMQVVYLQRAKGSTANPT-SLTSRPTKGSSSSETETASVVDIQGNEGKTEKREEKGISIEGATEEGIKSVINFLKDKIPELKVKVMKIN-VPDEVIEDGDSVKQFMQEDDEKTQSSEDSEDEADDLDKIQPDEVALGGGSNTAEDGQNLDM-KLFIGGVLHNKEDTSSKDDYVRQPAEIRDMERDSFVLHVPVRSQDHDIGENKVSKVKVAAIAAQGISELMPSEVAKAFWSADKVSPKVSRDVREIVKLAVSQAQKRNRLSEHTSFSRITTSKGSLDPFDGLYVGAFGPYGTEVVQLRCKFGNWNGGDDNDKSSDVEFFEYVEAVKLTGDLNVPAGQVTFRAKIGKGSRIPNRGMYPDELGVVASYSGQGRIAEFGFRNPQWVDGELLQLSGKGMGPYVRGADLGFLYVVPEQSFLVLFNRLKLPE 656
BLAST of DCAR_026130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A118JYJ6 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 801.971 bits (2070), Expect = 0.000e+0
Identity = 417/658 (63.37%), Postives = 510/658 (77.51%), Query Frame = 0
Match: A0A118JYJ6 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 801.971 bits (2070), Expect = 0.000e+0
Identity = 417/658 (63.37%), Postives = 510/658 (77.51%), Query Frame = 0
Query: 1 MGVANA-WATGHSVP-VPHIRPPQSCLNSHKFLSLRKLNYLLGWSCSSVPRNPSWGIGSRVVKQQVFNCRCSGDGNGG---------------------VGDRNVSTSNFQLEDAIEKEDFQEAAKLKIAIKEATSKDSIAEIMSELKNAIDEERYHEASRLCRSTGSGLVGWWVGYSKDSDDPFGKLIHITPGVGRFVGKTFSPRQLVTASPGTPLFEIFVVKDVEETYTMQVVFLKRIKGSTTKSTRSPTSKSTKLPS-EDDEDTSVVDVEVNEDKPEKGNEKSMTFEGVTEDGLRSVINFLKDKIPELKVKVTYVDESD-DEVIEDSDSLKQIMEENDENSVLVESSEDESSNLDDIQPDQFSLGGAGNAVEDEKNLDMMKLFVGGILHNKEESPSKDEYMRVPGEIKDMERDSFLLHVPVGKLGRNDSANFLPNEELAAISAKGASDLMPPDVAKAFFGANKVSPRVSRDVREIVKLAASQAQKKEKLSEYTSFSRINTSNGDLDPFEGLYVGAFGPYGTEVVQLRRKYGNWNSTSDSEESSNIDFFEYVEAVKLTGDLNVPGGQVTFRVKVGQGNRLSNRGMYPDELGVVASYKGQGRIADFGFKNPKWVEGELLQLNGRGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE 633
M VANA W TG S+ +P IR P L+S S+ + ++ L S S+ I + +CRCS +G + +R+VS FQLE+AIEKEDFQEA KLK AI EATSKDS+AEIMSELKNAI EERYH+AS+LC++TGSGLVGWWVGYSKDSDDPFG+LI ITPGVGRF+G++++PRQLV+ASPGTPLFEIFVVK+ +ETYTMQVVF++R K S +K+ TS STK S D E+ SV+DV+VNEDKP K +EKS+ FEG TEDG+RSVINFLKDKIPELK+K V + D +EVIEDSD++ Q+M+E+DE + E SEDE+++LDD QPD+ +G +A +D KNL+M KLFVGG+LHN+E++PSKDE +RVP EI++ME+DSF+LHVP+ + + ++AAI+++G S+LMPPDVAKA + ++KVS +VSRDVREIVK A SQA+K+EKLSEYT+FSRI TS GDLDPF+GLYVGAFGPYGTEVVQLRRKYGNW+ +D ++FFEYVEAVK+TGDLNVP GQVTFR K+ +G+ SNRGMYPDELGVVASYKGQGRIA+FGFKNPKWVEGELLQLNG+GMGPYVKGADLGFLYVVPEQSFLVLFNRL+LPE
Sbjct: 1 MAVANASWVTGTSLSNIPQIRHP---LSSGFDFSVARRSFRLRLVSGSSNALKSFPIHT--------SCRCSSNGTNSDHDTSSDWDWNRWTRHFSEIELAERSVSLLQFQLEEAIEKEDFQEALKLKTAIAEATSKDSVAEIMSELKNAIHEERYHDASKLCKNTGSGLVGWWVGYSKDSDDPFGRLIRITPGVGRFIGRSYNPRQLVSASPGTPLFEIFVVKETDETYTMQVVFMQRAKTSNSKAASPSTSSSTKGTSVADIENASVIDVKVNEDKPGKNDEKSINFEGATEDGIRSVINFLKDKIPELKIKDLKVMKVDVEEVIEDSDTVNQLMQEDDEKTTSDEDSEDETTDLDDPQPDRIVVGPNSDASDDTKNLEM-KLFVGGVLHNREDTPSKDELVRVPAEIEEMEKDSFVLHVPIKSHDHDSEESIASKVKIAAIASQGVSELMPPDVAKALWSSDKVSRKVSRDVREIVKFAVSQAKKREKLSEYTNFSRITTSRGDLDPFDGLYVGAFGPYGTEVVQLRRKYGNWSGAND------VEFFEYVEAVKVTGDLNVPAGQVTFRAKLAKGSHFSNRGMYPDELGVVASYKGQGRIAEFGFKNPKWVEGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLRLPE 640
BLAST of DCAR_026130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438KBR5 ((Protein EXECUTER 2, chloroplastic {ECO:0000313|EMBL:RVX18644.1}))
HSP 1 Score: 801.971 bits (2070), Expect = 0.000e+0
Identity = 413/662 (62.39%), Postives = 497/662 (75.08%), Query Frame = 0
Match: A0A438KBR5 ((Protein EXECUTER 2, chloroplastic {ECO:0000313|EMBL:RVX18644.1}))
HSP 1 Score: 801.971 bits (2070), Expect = 0.000e+0
Identity = 413/662 (62.39%), Postives = 497/662 (75.08%), Query Frame = 0
Query: 1 MGVANAWATGHSVPVPHIRPPQSC---LNSHKFLSLRKLNYLLGWSC-SSVPRNPSWGIGSRVVKQQVFNCRCSGDGNGGV------------------------GDRNVSTSNFQLEDAIEKEDFQEAAKLKIAIKEATSKDSIAEIMSELKNAIDEERYHEASRLCRSTGSGLVGWWVGYSKDSDDPFGKLIHITPGVGRFVGKTFSPRQLVTASPGTPLFEIFVVKDVEETYTMQVVFLKRIKGSTTKSTRSPTSKSTK-LPSEDDEDTSVVDVEVNEDKPEKGNEKSMTFEGVTEDGLRSVINFLKDKIPELKVKVTYVDESDDEVIEDSDSLKQIMEENDENSVLVESSEDESSNLDDIQPDQFSLGGAGNAVEDEKNLDMMKLFVGGILHNKEESPSKDEYMRVPGEIKDMERDSFLLHVPVGKLGRNDSANFLPNEELAAISAKGASDLMPPDVAKAFFGANKVSPRVSRDVREIVKLAASQAQKKEKLSEYTSFSRINTSNGDLDPFEGLYVGAFGPYGTEVVQLRRKYGNWNSTSDSEESSNIDFFEYVEAVKLTGDLNVPGGQVTFRVKVGQGNRLSNRGMYPDELGVVASYKGQGRIADFGFKNPKWVEGELLQLNGRGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE 633
M + NAW GH + RP +SC L S K S KL + GW SV P+ R K CRCS + + S FQLEDAIE+EDF+EAAKLK+AI EA S DS+ EIMS+LKNA+DEERYH+AS+LCR T SGLVGWWVG S DSDDPFG+L+HITPGVGRFVG+++SPRQLVTAS GTPLFEIFVVKD +E Y MQVV+L+R KGST T S TS+ TK S + E SVVD++ NE K EK EK ++ EG TE+G++SVINFLKDKIPELKVKV ++ DEVIED DS+KQ M+E+DE + E SEDE+ +LD IQPD+ +LGG N ED +NLDM KLF+GG+LHNKE++ SKD+Y+R P EI+DMERDSF+LHVPV + N + ++AAI+A+G S+LMP +VAKAF+ A+KVSP+VSRDVREIVKLA SQAQK+ +LSE+TSFSRI TS G LDPF+GLYVGAFGPYGTEVVQLR K+GNWN D+++SS+++FFEYVEAVKLTGDLNVP GQVTFR K+G+G+R+ NRGMYPDELGVVASY GQGRIA+FGF+NP+WV+GELLQL+G+GMGPYV+GADLGFLYVVPEQSFLVLFNRLKLPE
Sbjct: 1 MALTNAWGMGHIASMTQFRPSKSCSDVLLSSKRSSNLKLGFFFGWGLGCSVYHKPA---DFRPRKSPNLCCRCSNNPTIANNGNSSSSSGWDWNQWSRHFSEIEQAESFASVLKFQLEDAIEREDFEEAAKLKMAIAEAMSMDSVTEIMSQLKNAVDEERYHDASKLCRHTASGLVGWWVGCSADSDDPFGRLVHITPGVGRFVGRSYSPRQLVTASAGTPLFEIFVVKDSDEKYIMQVVYLQRAKGSTANPT-SLTSRPTKGSSSSETETASVVDIQGNEGKTEKREEKGISIEGATEEGIKSVINFLKDKIPELKVKVMKIN-VPDEVIEDGDSVKQFMQEDDEKTQSSEDSEDEADDLDKIQPDEVALGGGSNTAEDGQNLDM-KLFIGGVLHNKEDTSSKDDYVRQPAEIRDMERDSFVLHVPVRSQDHDIGENKVSKVKVAAIAAQGISELMPSEVAKAFWSADKVSPKVSRDVREIVKLAVSQAQKRNRLSEHTSFSRITTSKGSLDPFDGLYVGAFGPYGTEVVQLRCKFGNWNGGDDNDKSSDVEFFEYVEAVKLTGDLNVPAGQVTFRAKIGKGSRIPNRGMYPDELGVVASYSGQGRIAEFGFRNPQWVDGELLQLSGKGMGPYVRGADLGFLYVVPEQSFLVLFNRLKLPE 656
BLAST of DCAR_026130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2P5CJ91 ((Protein EXECUTER {ECO:0000313|EMBL:PON61108.1}))
HSP 1 Score: 790.801 bits (2041), Expect = 0.000e+0
Identity = 408/666 (61.26%), Postives = 515/666 (77.33%), Query Frame = 0
Match: A0A2P5CJ91 ((Protein EXECUTER {ECO:0000313|EMBL:PON61108.1}))
HSP 1 Score: 790.801 bits (2041), Expect = 0.000e+0
Identity = 408/666 (61.26%), Postives = 515/666 (77.33%), Query Frame = 0
Query: 1 MGVANAWAT-GHSVPVPHIRPPQSCLNSHKFLSLR-KLNYLLGWSCS--SVPR---------NPSWGIGSRVVKQQVFNCRCSGDGNGGVG-----DRN---------------VSTSNFQLEDAIEKEDFQEAAKLKIAIKEATSKDSIAEIMSELKNAIDEERYHEASRLCRSTGSGLVGWWVGYSKDSDDPFGKLIHITPGVGRFVGKTFSPRQLVTASPGTPLFEIFVVKDVEETYTMQVVFLKRIKGSTTKSTRSPTSKSTKLPSEDDEDTSVVDVEVNEDKPEKGNEKSMTFEGVTEDGLRSVINFLKDKIPELKVKVTYVDESDDEVIEDSDSLKQIMEENDENSVLVESSEDESSNLDDIQPDQFSLGGAGNAVEDEKNLDMMKLFVGGILHNKEESPSKDEYMRVPGEIKDMERDSFLLHVPVGKLGRNDSANFLPNEELAAISAKGASDLMPPDVAKAFFGANKVSPRVSRDVREIVKLAASQAQKKEKLSEYTSFSRINTSNGDLDPFEGLYVGAFGPYGTEVVQLRRKYGNWNSTSDSEESSNIDFFEYVEAVKLTGDLNVPGGQVTFRVKVGQGNRLSNRGMYPDELGVVASYKGQGRIADFGFKNPKWVEGELLQLNGRGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE 633
M V N+W G ++ VP RP C + S+ +L+++LGW CS ++P+ + S +R + F+CRC+ N G D N S FQLE+AIEKEDFQEAAKLK+AI+EATSKDS+ EIMS+LK AID+ERYH+ASRLCR TGSGL+GWWVGYSKDS+DPFG+LIHITPG+GRFVG+++SPRQLVTAS GTPLFEI+VVK+ +ETY MQVV+L+R KG++ ST SPT + + + E+ SVVDV+ EDK EKG EK + E TE+G++SVINFLKDKIP LKVKV V+ ++D VIED DS+KQ+M+EN++ + E+SEDE SNLD+IQPD+ +LGG + EDEK+LD+ KLF+GG++HN E++ +KD+Y+R P EIKDMERDSFLLH+P L + + L ++AA++A+G S+LMPPDVAKAF+ ++K+S +VSR+VREIVKLA SQAQK+ LSEYT+F+RI TS GDLDPF+GLYVGAFGPYGTEVVQLRRK+G+WN + S +++FFEYVEAVKLTGDLNVP GQVTFR K+G+GNR+SNRGMYP+ELGVVASYKGQGRIA+FGF+NP+WV+GELLQLNG+GMGP+VKGADLGFLYVVPEQSFLVLFNRLKLP+
Sbjct: 1 MAVTNSWGVLGQAMSVPQYRPSFCCSDFSAKKSINNRLSFVLGWGCSLQTMPQISSSFSSASSSSSFTSARRRQSSSFHCRCTNSTNDCNGSSLEWDWNRWSHYFSEIEQAESFASVLKFQLEEAIEKEDFQEAAKLKMAIEEATSKDSVIEIMSQLKIAIDQERYHDASRLCRHTGSGLIGWWVGYSKDSEDPFGRLIHITPGMGRFVGRSYSPRQLVTASSGTPLFEIYVVKNPDETYVMQVVYLQRAKGNSKNSTISPTKPAKSQSTSEVENESVVDVQEIEDKEEKGEEKGINIEEATEEGIKSVINFLKDKIPGLKVKVMNVNVNED-VIEDGDSVKQLMQENNDQADCGENSEDEVSNLDEIQPDEVTLGGT-DTTEDEKDLDV-KLFIGGVVHNNEDTSTKDDYVRHPAEIKDMERDSFLLHIPGRNLDHDTKEDKLSKVKVAALAAQGVSELMPPDVAKAFWKSDKISSKVSRNVREIVKLAVSQAQKRSTLSEYTTFNRITTSKGDLDPFDGLYVGAFGPYGTEVVQLRRKFGHWNGSDYKVSSLDVEFFEYVEAVKLTGDLNVPAGQVTFRAKIGRGNRVSNRGMYPEELGVVASYKGQGRIAEFGFRNPQWVDGELLQLNGKGMGPFVKGADLGFLYVVPEQSFLVLFNRLKLPQ 663
BLAST of DCAR_026130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4EPE1 ((protein EXECUTER 2, chloroplastic {ECO:0000313|RefSeq:XP_018821270.1}))
HSP 1 Score: 790.415 bits (2040), Expect = 0.000e+0
Identity = 405/656 (61.74%), Postives = 500/656 (76.22%), Query Frame = 0
Match: A0A2I4EPE1 ((protein EXECUTER 2, chloroplastic {ECO:0000313|RefSeq:XP_018821270.1}))
HSP 1 Score: 790.415 bits (2040), Expect = 0.000e+0
Identity = 405/656 (61.74%), Postives = 500/656 (76.22%), Query Frame = 0
Query: 1 MGVANAWATGHSVPVPHIRPP--QSCLNSHKFLSLRKLNYLLGWSCSSV-PRNPSWGIGS-RVVKQQVFNCRCSGDGNGGV------------------GDRNVSTSNFQLEDAIEKEDFQEAAKLKIAIKEATSKDSIAEIMSELKNAIDEERYHEASRLCRSTGSGLVGWWVGYSKDSDDPFGKLIHITPGVGRFVGKTFSPRQLVTASPGTPLFEIFVVKDVEETYTMQVVFLKRIKGSTTKSTRSPTSKSTKLPSEDD-EDTSVVDVEVNEDKPEKGNEKSMTFEGVTEDGLRSVINFLKDKIPELKVKVTYVDESDDEVIEDSDSLKQIMEENDENSVLVESSEDESSNLDDIQPDQFSLGGAGNAVEDEKNLDMMKLFVGGILHNKEESPSKDEYMRVPGEIKDMERDSFLLHVPVGKLGRNDSANFLPNEELAAISAKGASDLMPPDVAKAFFGANKVSPRVSRDVREIVKLAASQAQKKEKLSEYTSFSRINTSNGDLDPFEGLYVGAFGPYGTEVVQLRRKYGNWNSTSDSEESSNIDFFEYVEAVKLTGDLNVPGGQVTFRVKVGQGNRLSNRGMYPDELGVVASYKGQGRIADFGFKNPKWVEGELLQLNGRGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE 633
+ + NA G ++P+P +RPP C + S LN++LGW C S RN G+ S + K C CS + N + S FQLEDAIE EDFQEAAKLK+AI EATSKD +AEIMS+LKNAI+EERY +ASRLCR TGSGLVGWWVGY K+SDDPFG+L+ ITPGVGRFVG+++SPRQLVT++PGTPLFEIFVVKD +ETY MQVV L+R KG++ S+ PS + ED SVV+++ NE K E+ E EGVTE+G++SVINFLK+KIP LKVKV V+ ++ EV++DSDS+KQ+M+E+ E E+SE+ NLD+IQPD +LGG +A EDEK+LDM KLF+GGI+HN E++P KDEY+R+P EI+DMERDSF+LH+P L + + ++AA++A+G S+LMPPDVAKAF+GA+KVS +VSR+VREIVKLA QAQK+ +LSEYT+FSRI TS GDLDPF GLYVGAFGPYGTEVVQLRRK+G+WN+ D ++SS+++FFEYVEAVKLTGDLNVP GQVTFR K+G+GN LS+R MYPDELGVVASYKGQGRIA+FGF+NPKWV+GELLQLNGRG+GPYVKGADLGFLYVVPEQSFLVLFNRLKLP+
Sbjct: 2 VALGNALGVGQAIPIPQLRPPLFYCCSDFLSKKSKANLNFVLGWGCCSFQARN---GVSSNKSRKTPGPRCLCSNNSNRNSSLEWDWNRWNRHFSEIEQAESFASVLKFQLEDAIENEDFQEAAKLKMAIAEATSKDCVAEIMSQLKNAIEEERYLDASRLCRYTGSGLVGWWVGYPKESDDPFGRLVRITPGVGRFVGRSYSPRQLVTSAPGTPLFEIFVVKDTDETYVMQVVCLQRTKGNSANSSLPSKLTKDHHPSTSEVEDESVVEIQENEGKAERPEEMGTNIEGVTEEGIKSVINFLKEKIPGLKVKVMNVNVTE-EVVKDSDSVKQLMQEDSEKMGSTENSEEGVGNLDEIQPDGVTLGGGSDASEDEKDLDM-KLFIGGIVHN-EDTPIKDEYVRLPAEIRDMERDSFVLHIPGRSLDHDAGESKASRVKVAALAAQGVSELMPPDVAKAFWGADKVSSKVSRNVREIVKLAVRQAQKRSRLSEYTTFSRITTSKGDLDPFSGLYVGAFGPYGTEVVQLRRKFGHWNAGDDEDKSSDVEFFEYVEAVKLTGDLNVPAGQVTFRAKIGRGNHLSSRAMYPDELGVVASYKGQGRIAEFGFRNPKWVDGELLQLNGRGIGPYVKGADLGFLYVVPEQSFLVLFNRLKLPD 651
BLAST of DCAR_026130 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6PB80 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 788.489 bits (2035), Expect = 0.000e+0
Identity = 417/662 (62.99%), Postives = 501/662 (75.68%), Query Frame = 0
Match: A0A5N6PB80 (DUF3506 domain-containing protein {ECO:0000259|Pfam:PF12014})
HSP 1 Score: 788.489 bits (2035), Expect = 0.000e+0
Identity = 417/662 (62.99%), Postives = 501/662 (75.68%), Query Frame = 0
Query: 1 MGVANA-WATGHSVP-VPHIRPP-QSCLNSHKFLSLRKLNYLLGWSCSSVPRNPSWGIGSRVVKQQVFNCRCSGDGNGGVGD-----------------------RNVSTSNFQLEDAIEKEDFQEAAKLKIAIKEATSKDSIAEIMSELKNAIDEERYHEASRLCRSTGSGLVGWWVGYSKDSDDPFGKLIHITPGVGRFVGKTFSPRQLVTASPGTPLFEIFVVKDVEETYTMQVVFLKRIKGSTTKSTRSPTSKSTK-LPSEDDEDTSVVDVEVNEDKPEKGNEKSMTFEGVTEDGLRSVINFLKDKIPELKVKVTYVDESD-DEVIEDSDSLKQIMEENDENSVLVESSEDESSNLDDIQPDQFSLGGAGNAVEDEKNLDMMKLFVGGILHNKEESPSKDEYMRVPGEIKDMERDSFLLHVPVGKLGRNDSANFLPNE-ELAAISAKGASDLMPPDVAKAFFGANKVSPRVSRDVREIVKLAASQAQKKEKLSEYTSFSRINTSNGDLDPFEGLYVGAFGPYGTEVVQLRRKYGNWNSTSDSEESSNIDFFEYVEAVKLTGDLNVPGGQVTFRVKVGQGNRLSNRGMYPDELGVVASYKGQGRIADFGFKNPKWVEGELLQLNGRGMGPYVKGADLGFLYVVPEQSFLVLFNRLKLPE 633
M +ANA WATG SVP +P IRPP SC F S+ K Y L + S S + + +CRCS NGG D R+VS FQLE+AIEKEDFQEA+KLKIAI EATSKDS+AEIMSELKNAI EERYHEAS+LC++TGSGLVGWWVGYSKDSDDPFG+LI ITPGVGRFVGK+++PRQLV+ASPGTPLFEIFVVK+ +ETY MQVVF++R K S K+T +S S + P D + SV+DV NEDKP K +EKS+ FEG EDG++SVINFLKDKIPELK+K V + D ++VIED+D++ Q+++E+DE S E SEDE N+D L ED KNL+ MKLFVGG+LH+++++PSKDE++RVP EI+++E+DSF+LHVPV NDS + ++ ++AAI+++G S+LMPPDVAKA + ++KVS +VSRDVREIVK A SQA+K+EKLSEYT+FSRI TS GDLDPFEGLYVGAFGPYGTEVVQL+RKYGNW+ D ++FFEYVEAVK+TGDLNVP GQVTFR K+ +G SNRGMYPDELGVVASYKGQGRIA+FGFKNPKWVEGELLQLNG+GMGPYVKGADLGFLYVVPEQSFLVLFNRL+LPE
Sbjct: 1 MALANAYWATGTSVPNIPRIRPPVSSC-----FESVSKKTYNLKFISGSCNLLKSSSVNT--------SCRCSS--NGGYSDHVTSSDWDWNRWTRHFSEIELAERSVSLLQFQLEEAIEKEDFQEASKLKIAIAEATSKDSVAEIMSELKNAIHEERYHEASKLCKNTGSGLVGWWVGYSKDSDDPFGRLIRITPGVGRFVGKSYNPRQLVSASPGTPLFEIFVVKEYDETYAMQVVFMQRAKASNLKATGPSSSSSMEGTPMTDIGNASVIDVIGNEDKPGKNDEKSINFEGAAEDGIKSVINFLKDKIPELKIKDLKVMKVDVEQVIEDNDTVNQLIQEDDEKSTSDEESEDE--NID------LGLNNDETLQEDGKNLE-MKLFVGGVLHSRDDTPSKDEFVRVPAEIEELEKDSFVLHVPVKSHNDNDSEESIASKVKIAAIASQGVSELMPPDVAKALWSSDKVSRKVSRDVREIVKFAVSQAKKREKLSEYTNFSRITTSRGDLDPFEGLYVGAFGPYGTEVVQLKRKYGNWSGAKD------VEFFEYVEAVKVTGDLNVPAGQVTFRAKLAKGGHFSNRGMYPDELGVVASYKGQGRIAEFGFKNPKWVEGELLQLNGKGMGPYVKGADLGFLYVVPEQSFLVLFNRLRLPE 632
| Match Name | Stats | Description |
|---|---|---|
| A0A5N6RSE4 | E-Value: 0.000e+0, PID: 63.44 | DUF3506 domain-containing protein {ECO:0000259|Pfa... [more] |
| A0A5B7B0J6 | E-Value: 0.000e+0, PID: 64.38 | DUF3506 domain-containing protein {ECO:0000259|Pfa... [more] |
| A0A5J5BIX2 | E-Value: 0.000e+0, PID: 64.17 | DUF3506 domain-containing protein {ECO:0000259|Pfa... [more] |
| A0A7N2MNM6 | E-Value: 0.000e+0, PID: 62.14 | DUF3506 domain-containing protein {ECO:0000259|Pfa... [more] |
| D7SHT0 | E-Value: 0.000e+0, PID: 62.54 | DUF3506 domain-containing protein {ECO:0000259|Pfa... [more] |
| A0A118JYJ6 | E-Value: 0.000e+0, PID: 63.37 | DUF3506 domain-containing protein {ECO:0000259|Pfa... [more] |
| A0A438KBR5 | E-Value: 0.000e+0, PID: 62.39 | (Protein EXECUTER 2, chloroplastic {ECO:0000313|EM... [more] |
| A0A2P5CJ91 | E-Value: 0.000e+0, PID: 61.26 | (Protein EXECUTER {ECO:0000313|EMBL:PON61108.1})[more] |
| A0A2I4EPE1 | E-Value: 0.000e+0, PID: 61.74 | (protein EXECUTER 2, chloroplastic {ECO:0000313|Re... [more] |
| A0A5N6PB80 | E-Value: 0.000e+0, PID: 62.99 | DUF3506 domain-containing protein {ECO:0000259|Pfa... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |