Resource Type:
Polypeptide
Name:
DCAR_023802
Identifier:
DCAR_023802.mRNA-protein
Sequence:
MLLATISWLILNILLLLSGIEPIYATPPDVSLTKSTCHDACGTIPVRFPF
GTGFGCGHPDFGRTIKCSSSGALQFSTSTGVYTISSIDYSANILILQDPF
MSTCASMQNSGSFHLDSMTPFKYVEEDTFVLLGCSTTSPLFDANEDLCDT
GSGLHICRGLYSCKGVTGIGLEPNAPISTCCVYDPPFAVGTSAVSNGLDL
PKLQCSSYASIFGFGGDEGNPMKWQYGISLQYNDSYYSDETCKNCVTSGG
TCGFSAIDQSFACICRNGINTTSNCFGRAELTEMMEGEGGGMKAAIGVRA
MESLGLGFDLASDFRLKFAKKCPDSADGRLVVLDDSSRRDVVLPGGGGGV
IRNVPDSIRCDKGDRIRFKSDVLTFNQMSELLNQKSSVQGKVPSGYFNAM
FDLSGSWLNDAAEADHLAFDGYFISLYYLHLIASPLVLHDKVKKSVPSHW
NPASLSRFIRTYGTHIIVGLAVGGQDIICIKQRPSSVIPPADLRGYLEDL
GDHFFSDGRSPLLERKTRDGKQKVPEVFNRMLQQHTMQFTSITETSSKDG
LTIISSKRGGDVFSQSHSNWLQTVASHPEAISFKLVPITSLLSGVPGSGY
LSHAINLYLRYKPALEDLHCFLEFQVPRQWAPLFCELPLRHQRKKSSCPS
LQFAFFGPKISVSSTQVGSGKKPVVGLRLFLEGKKCNQLAIHVQHLSSLP
NMMELASVNSSVACQWRGSDDYESNEQFLEPVRWKKFSNVCSSVVRHDPN
WLQGQESGGAFVVTGAQLVSKGQWPKTILHLRLLFTYLPNCTIRKTEWAA
AQQSSRKSGFLTNISTTFSFTQRAVTDAPKQLPAALNSGVYPEGPPVPLR
SKKLLRYVDVNEVVRGPHDTPGHWLVTAAKLVSDGGKIGMHVKFALLDYT
PA*
Sequence Length:
903
Sequence Checksum:
d916322c3300549f743548f03d418e87
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_023802, derives from mRNA, DCAR_023802. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_023802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_023802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZBL7 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412})
HSP 1 Score: 1006.13 bits (2600), Expect = 0.000e+0
Identity = 485/623 (77.85%), Postives = 553/623 (88.76%), Query Frame = 0
Match: A0A5B6ZBL7 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412})
HSP 1 Score: 1006.13 bits (2600), Expect = 0.000e+0
Identity = 485/623 (77.85%), Postives = 553/623 (88.76%), Query Frame = 0
Query: 281 LTEMMEGEGGGMKAAIGVRAMESLGLGFDLASDFRLKFAKKCPDSADGRLVVLDDSSRRDVVLPGGGGGVIRNVPDSIRCDKGDRIRFKSDVLTFNQMSELLNQKSSVQGKVPSGYFNAMFDLSGSWLNDAAEADHLAFDGYFISLYYLHLIASPLVLHDKVKKSVPSHWNPASLSRFIRTYGTHIIVGLAVGGQDIICIKQRPSSVIPPADLRGYLEDLGDHFFSDGRSP-LLERKTRDGKQKVPEVFNRMLQQHTMQFTSITETSSKDGLTIISSKRGGDVFSQSHSNWLQTVASHPEAISFKLVPITSLLSGVPGSGYLSHAINLYLRYKPALEDLHCFLEFQVPRQWAPLFCELPLRHQRKKSSCPSLQFAFFGPKISVSSTQVGSGKKPVVGLRLFLEGKKCNQLAIHVQHLSSLPNMMELASVNSSV--ACQWRGSDDYESNEQFLEPVRWKKFSNVCSSVVRHDPNWLQGQESGGAFVVTGAQLVSKGQWPKTILHLRLLFTYLPNCTIRKTEWAAAQQSSRKSGFLTNISTTFSFTQRAVTDAPKQLPAALNSGVYPEGPPVPLRSKKLLRYVDVNEVVRGPHDTPGHWLVTAAKLVSDGGKIGMHVKFALLDYT 900
+ E+ME ++ I +RAME+LGLGFDLASDFRLKFAK GRLVV+D+ ++RD+V+PGG IR V + IRCDKGDRIRFKSDVL FNQMSELLNQKSSVQGKVPSGY NA+FDLSG+WLNDAA+ +LAFDGYFISLYYLHL +SPLVL D VK+SVPSHW+PASLSRFI+TYGTHIIVG+AVGGQD++C KQ+PSS IPPA+LRGYLEDLGD FSDG+SP LLERKTRDGKQKVPEVFNRMLQ HTMQFTSITETSSKDGLTII SKRGGDVFSQSHS WLQTVA +PEAI FK VPITSLL+GVPGSGYLSHAINLYLRYKPA EDL FLEFQVPRQWAPLFCELPLRHQR+K+SCPSLQF+F GPKI VS TQV SG+KPV GLRL+LEGKKCN+LAIHVQHLSSLPN+M +V+ S CQWRGSDDYES++QFLEPV+WK+FSNVCSSVV+HDP+W++G ES G F+VTGAQL+SKG+WPKT+LHLRLL+T+LP+CTIRKTEWAAA ++SRK+ FL N+STT +FTQR VTDAP+QLPAAL+SGVYP+GPP+P+ S KLL+YVD+ EVVRGPHD PGHWLVTAAKLVS+GGKIG+HVKFALLDY+
Sbjct: 1 MYEVMED----LQRPIEIRAMEALGLGFDLASDFRLKFAKGYYQGG-GRLVVIDEVNKRDIVIPGGV--TIRGVSEDIRCDKGDRIRFKSDVLEFNQMSELLNQKSSVQGKVPSGYLNAIFDLSGAWLNDAADTKYLAFDGYFISLYYLHLTSSPLVLQDNVKESVPSHWDPASLSRFIQTYGTHIIVGMAVGGQDLLCAKQKPSSKIPPAELRGYLEDLGDCLFSDGKSPSLLERKTRDGKQKVPEVFNRMLQSHTMQFTSITETSSKDGLTIIWSKRGGDVFSQSHSKWLQTVAVNPEAILFKFVPITSLLTGVPGSGYLSHAINLYLRYKPAPEDLQYFLEFQVPRQWAPLFCELPLRHQRRKASCPSLQFSFMGPKIYVSPTQVSSGQKPVTGLRLYLEGKKCNRLAIHVQHLSSLPNIMTFPTVSPSSYRLCQWRGSDDYESSDQFLEPVKWKRFSNVCSSVVKHDPDWMRG-ESSGVFIVTGAQLISKGKWPKTVLHLRLLYTHLPSCTIRKTEWAAAPEASRKASFLMNLSTTLTFTQRTVTDAPRQLPAALDSGVYPDGPPMPVCSTKLLKYVDIAEVVRGPHDNPGHWLVTAAKLVSEGGKIGLHVKFALLDYS 615
BLAST of DCAR_023802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZB14 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412})
HSP 1 Score: 1005.74 bits (2599), Expect = 0.000e+0
Identity = 487/623 (78.17%), Postives = 549/623 (88.12%), Query Frame = 0
Match: A0A5B6ZB14 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412})
HSP 1 Score: 1005.74 bits (2599), Expect = 0.000e+0
Identity = 487/623 (78.17%), Postives = 549/623 (88.12%), Query Frame = 0
Query: 281 LTEMMEGEGGGMKAAIGVRAMESLGLGFDLASDFRLKFAKKCPDSADGRLVVLDDSSRRDVVLPGGGGGVIRNVPDSIRCDKGDRIRFKSDVLTFNQMSELLNQKSSVQGKVPSGYFNAMFDLSGSWLNDAAEADHLAFDGYFISLYYLHLIASPLVLHDKVKKSVPSHWNPASLSRFIRTYGTHIIVGLAVGGQDIICIKQRPSSVIPPADLRGYLEDLGDHFFSDGRSP-LLERKTRDGKQKVPEVFNRMLQQHTMQFTSITETSSKDGLTIISSKRGGDVFSQSHSNWLQTVASHPEAISFKLVPITSLLSGVPGSGYLSHAINLYLRYKPALEDLHCFLEFQVPRQWAPLFCELPLRHQRKKSSCPSLQFAFFGPKISVSSTQVGSGKKPVVGLRLFLEGKKCNQLAIHVQHLSSLPNMMELASVNSSV--ACQWRGSDDYESNEQFLEPVRWKKFSNVCSSVVRHDPNWLQGQESGGAFVVTGAQLVSKGQWPKTILHLRLLFTYLPNCTIRKTEWAAAQQSSRKSGFLTNISTTFSFTQRAVTDAPKQLPAALNSGVYPEGPPVPLRSKKLLRYVDVNEVVRGPHDTPGHWLVTAAKLVSDGGKIGMHVKFALLDYT 900
+ E+ME ++ I +RAMESLGLGFDLASDFRLKFAK GRLVV+D+ ++RD+V+PGG IR V + IRCDKGDRIRFKSDVL FNQMSELLNQKSSVQGKVPSGY NA+FDLSG+WLNDAA+ +LAFDGYFISLYYLHL +SPLVL D VK+SVPSHW+PASLSRFI+TYGTHIIVG+AVGGQD++C+KQ+PSS IPPA+LRGYLEDLGD FSDGRSP LLERKTRDGKQKVPEVFNRMLQ HTMQFTSITETSSKDGLTII SKRGGDVFSQSHS WLQTVA++PEAI FK VPITSLL+GVPGSGYLSHAINLYLRYKPA EDL FLEFQVP QW+PLFCELPLRHQR+ SCPSLQF+F GPKI VS TQV SG+KPV GLRL+LEGKKCN+LAIHVQHLSSLPN+M +V+ S CQWRGSDDYES++QFLEPV+WK+FSNVCSSVV+HDP+W+QG +S G FVVTGAQL+SKG+WPKT+LHLRL +T+LPNCTIRKTEWAAA ++S KS FL N+STTF+FTQR V DAPKQLPA LNSGVYP+GPPVP+RS +LL+YVD EVVRGPHD PGHWLVTAAKLVS+GGKIG+HVKFALLDY+
Sbjct: 1 MYEVMED----LQRPIEIRAMESLGLGFDLASDFRLKFAKGYYQGG-GRLVVIDEVNKRDIVIPGGV--TIRGVSEDIRCDKGDRIRFKSDVLEFNQMSELLNQKSSVQGKVPSGYLNAIFDLSGAWLNDAADTKYLAFDGYFISLYYLHLTSSPLVLQDNVKESVPSHWDPASLSRFIQTYGTHIIVGMAVGGQDLLCVKQKPSSKIPPAELRGYLEDLGDCLFSDGRSPSLLERKTRDGKQKVPEVFNRMLQSHTMQFTSITETSSKDGLTIIWSKRGGDVFSQSHSKWLQTVATNPEAILFKFVPITSLLTGVPGSGYLSHAINLYLRYKPAPEDLQYFLEFQVPSQWSPLFCELPLRHQRRMVSCPSLQFSFMGPKIHVSPTQVSSGQKPVTGLRLYLEGKKCNRLAIHVQHLSSLPNIMTFPTVSPSSYRLCQWRGSDDYESSDQFLEPVKWKRFSNVCSSVVKHDPDWIQG-DSSGVFVVTGAQLISKGRWPKTVLHLRLHYTHLPNCTIRKTEWAAAPEASHKSNFLMNLSTTFTFTQRTVADAPKQLPAELNSGVYPDGPPVPVRSARLLKYVDTAEVVRGPHDDPGHWLVTAAKLVSEGGKIGLHVKFALLDYS 615
BLAST of DCAR_023802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5ADD4 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412})
HSP 1 Score: 988.408 bits (2554), Expect = 0.000e+0
Identity = 476/611 (77.91%), Postives = 542/611 (88.71%), Query Frame = 0
Match: A0A5J5ADD4 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412})
HSP 1 Score: 988.408 bits (2554), Expect = 0.000e+0
Identity = 476/611 (77.91%), Postives = 542/611 (88.71%), Query Frame = 0
Query: 293 KAAIGVRAMESLGLGFDLASDFRLKFAKKCPDSADGRLVVLDDSSRRDVVLPGGGGGVIRNVPDSIRCDKGDRIRFKSDVLTFNQMSELLNQKSSVQGKVPSGYFNAMFDLSGSWLNDAAEADHLAFDGYFISLYYLHLIASPLVLHDKVKKSVPSHWNPASLSRFIRTYGTHIIVGLAVGGQDIICIKQRPSSVIPPADLRGYLEDLGDHFFSDGRSP-LLERKTRDGKQKVPEVFNRMLQQHTMQFTSITETSSKDGLTIISSKRGGDVFSQSHSNWLQTVASHPEAISFKLVPITSLLSGVPGSGYLSHAINLYLRYKPALEDLHCFLEFQVPRQWAPLFCELPLRHQRKKSSCPSLQFAFFGPKISVSSTQVGSGKKPVVGLRLFLEGKKCNQLAIHVQHLSSLPNMMELASVN--SSVACQWRGSDDYESNEQFLEPVRWKKFSNVCSSVVRHDPNWLQGQESGGAFVVTGAQLVSKGQWPKTILHLRLLFTYLPNCTIRKTEWAAAQQSSRKSGFLTNISTTFSFTQRAVTDAPKQLPAALNSGVYPEGPPVPLRSKKLLRYVDVNEVVRGPHDTPGHWLVTAAKLVSDGGKIGMHVKFALLDYT 900
+ I +RAME+LG GFD+ASDFRLKFAK P GRLV +DD ++RD+V+PGG IR V IRCDKGD+IRFKSDVL FN+MS LLNQKSS QGK+PSGY NA+FDLSG+WLNDA +A +LAFDGYFISLYYL+L ASPLVL DKVKKSVP+HW+PASLSRFI+TYGTHIIVG+AVGGQD++C+KQ+PSS IPPA+L+GYLEDLGD FSDGRSP LLERKTRDGKQ VPEVFNRMLQ HTMQFTSITETSSKDGLTII SKRGGDVFSQSHS WLQT+A++PEAI FK VPITSLL+GVPGSGYLSHAINLYLRYKPA EDL FLEFQVPRQW+PLF ELPLRHQ +K SCPSLQF+F GPKI VSSTQV SG+KPV GLRL+ EGKK N+LAIHVQHLSSLPN+M +SV+ S CQWRGSD YES++QFLEPV+WK++SNVCSS V+HDP+W++G ES G F+VTGAQL+SKG+WPKT+LHLRLL+T++PNCTIRKTEWAAA ++SRKS FLTN+STTF+FTQR VTDAPKQLPAALNSGVYP+GPPVP+RS KLL+YVD EVVRGPHD PGHWLVTAAKLVS+GGKIG+HVKFALLDY+
Sbjct: 5 RRPIEIRAMEALGSGFDVASDFRLKFAKGYP--GGGRLVEIDDVNKRDIVIPGGV--TIRGVSQDIRCDKGDQIRFKSDVLEFNEMSTLLNQKSSGQGKIPSGYLNAIFDLSGTWLNDAVDAKYLAFDGYFISLYYLYLTASPLVLRDKVKKSVPAHWDPASLSRFIQTYGTHIIVGMAVGGQDLLCVKQKPSSKIPPAELKGYLEDLGDCLFSDGRSPSLLERKTRDGKQNVPEVFNRMLQSHTMQFTSITETSSKDGLTIIWSKRGGDVFSQSHSAWLQTMATNPEAILFKFVPITSLLTGVPGSGYLSHAINLYLRYKPAPEDLRYFLEFQVPRQWSPLFSELPLRHQIRKVSCPSLQFSFMGPKIHVSSTQVSSGEKPVTGLRLYFEGKKFNRLAIHVQHLSSLPNIMTFSSVSPTSCRPCQWRGSDGYESSDQFLEPVKWKRYSNVCSSAVKHDPDWIKG-ESSGVFIVTGAQLISKGKWPKTVLHLRLLYTHIPNCTIRKTEWAAAPEASRKSSFLTNLSTTFTFTQRTVTDAPKQLPAALNSGVYPDGPPVPVRSAKLLKYVDTAEVVRGPHDDPGHWLVTAAKLVSEGGKIGLHVKFALLDYS 610
BLAST of DCAR_023802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9I3I6 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412})
HSP 1 Score: 977.237 bits (2525), Expect = 0.000e+0
Identity = 465/608 (76.48%), Postives = 533/608 (87.66%), Query Frame = 0
Match: A0A2G9I3I6 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412})
HSP 1 Score: 977.237 bits (2525), Expect = 0.000e+0
Identity = 465/608 (76.48%), Postives = 533/608 (87.66%), Query Frame = 0
Query: 293 KAAIGVRAMESLGLGFDLASDFRLKFAKKCPDSADGRLVVLDDSSRRDVVLPGGGGGVIRNVPDSIRCDKGDRIRFKSDVLTFNQMSELLNQKSSVQGKVPSGYFNAMFDLSGSWLNDAAEADHLAFDGYFISLYYLHLIASPLVLHDKVKKSVPSHWNPASLSRFIRTYGTHIIVGLAVGGQDIICIKQRPSSVIPPADLRGYLEDLGDHFFSDGRSPLLERKTRDGKQKVPEVFNRMLQQHTMQFTSITETSSKDGLTIISSKRGGDVFSQSHSNWLQTVASHPEAISFKLVPITSLLSGVPGSGYLSHAINLYLRYKPALEDLHCFLEFQVPRQWAPLFCELPLRHQRKKSSCPSLQFAFFGPKISVSSTQVGSGKKPVVGLRLFLEGKKCNQLAIHVQHLSSLPNMMELASVNSSVACQWRGSDDYESNEQFLEPVRWKKFSNVCSSVVRHDPNWLQGQESGGAFVVTGAQLVSKGQWPKTILHLRLLFTYLPNCTIRKTEWAAAQQSSRKSGFLTNISTTFSFTQRAVTDAPKQLPAALNSGVYPEGPPVPLRSKKLLRYVDVNEVVRGPHDTPGHWLVTAAKLVSDGGKIGMHVKFALLDYT 900
K + VRA E+LG GFDLASDFRLKF K+CP+ GRLV+LD+ +RDVV+PGG I +VP+ IR DKGD IRFKSDVL FNQMSELLNQKSSVQGKVPSGY NA+FDLSG+WLNDAA+A +LAFDGYFISLYYLHL SPLVLHD VKKSVPSHW+PA+LSRFI+TYGTHI+VG+ VGGQD++C+KQRPSS IPPA+L+GYLE+LGD FSD SP+LERK +D K KVPEVFNRMLQ HTMQFTSITETSSKDGLT+I SKRGGDVF+QSHS WLQT+A++PEAI FK VPITSLL+G+PGSGYLSHAINLYLRYKP+LEDL FLEFQVPRQWAPLFCELPLRHQR+K+S PSLQF+FFGPKI VSSTQV S +KPV+GLRL+LEGKK N LAIH+QHLSSLPN M + ++ QWRGSDDYES+ QFLEPVRWK++SNVCSSVV HDPNWLQG ES G F+VTGAQLV KG+WP+ +LHLRLL++Y+PNCT+RKTEWA+A +SSRKS FLTN+STTF+FTQ+ V DA KQLPA LNSGVYP+GPPVP+RS KLL+YVD EV RGP+D PGHWLVTAAKLVS+GGKIG+ VKFALLDY+
Sbjct: 13 KKPVEVRATEALGQGFDLASDFRLKFVKRCPNG--GRLVLLDEGQKRDVVIPGGV--TIPDVPECIRVDKGDHIRFKSDVLQFNQMSELLNQKSSVQGKVPSGYLNAIFDLSGAWLNDAADAKYLAFDGYFISLYYLHLTVSPLVLHDHVKKSVPSHWDPAALSRFIQTYGTHIVVGMGVGGQDLLCVKQRPSSPIPPAELKGYLEELGDCLFSDTNSPILERKAKDNKTKVPEVFNRMLQAHTMQFTSITETSSKDGLTLIWSKRGGDVFAQSHSRWLQTMAANPEAILFKFVPITSLLNGIPGSGYLSHAINLYLRYKPSLEDLPYFLEFQVPRQWAPLFCELPLRHQRRKASFPSLQFSFFGPKIYVSSTQVTSDQKPVIGLRLYLEGKKSNCLAIHIQHLSSLPNSMTFPT--TTFKPQWRGSDDYESSNQFLEPVRWKRYSNVCSSVVNHDPNWLQG-ESNGVFIVTGAQLVIKGKWPRKVLHLRLLYSYIPNCTLRKTEWASAPESSRKSSFLTNLSTTFTFTQKTVADASKQLPATLNSGVYPDGPPVPVRSTKLLKYVDATEVARGPYDNPGHWLVTAAKLVSEGGKIGLQVKFALLDYS 613
BLAST of DCAR_023802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3Q7I8X2 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412})
HSP 1 Score: 972.23 bits (2512), Expect = 0.000e+0
Identity = 460/611 (75.29%), Postives = 536/611 (87.73%), Query Frame = 0
Match: A0A3Q7I8X2 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412})
HSP 1 Score: 972.23 bits (2512), Expect = 0.000e+0
Identity = 460/611 (75.29%), Postives = 536/611 (87.73%), Query Frame = 0
Query: 293 KAAIGVRAMESLGLGFDLASDFRLKFAKKCPDSADGRLVVLDDSSRRDVVLPGGGGGVIRNVPDSIRCDKGDRIRFKSDVLTFNQMSELLNQKSSVQGKVPSGYFNAMFDLSGSWLNDAAEADHLAFDGYFISLYYLHLIASPLVLHDKVKKSVPSHWNPASLSRFIRTYGTHIIVGLAVGGQDIICIKQRPSSVIPPADLRGYLEDLGDHFFSDGRSPLLERKTRDGKQKVPEVFNRMLQQHTMQFTSITETSSKDGLTIISSKRGGDVFSQSHSNWLQTVASHPEAISFKLVPITSLLSGVPGSGYLSHAINLYLRYKPALEDLHCFLEFQVPRQWAPLFCELPLRHQRKKSSCPSLQFAFFGPKISVSSTQVGSGKKPVVGLRLFLEGKKCNQLAIHVQHLSSLPNMMELASVNSSV---ACQWRGSDDYESNEQFLEPVRWKKFSNVCSSVVRHDPNWLQGQESGGAFVVTGAQLVSKGQWPKTILHLRLLFTYLPNCTIRKTEWAAAQQSSRKSGFLTNISTTFSFTQRAVTD-APKQLPAALNSGVYPEGPPVPLRSKKLLRYVDVNEVVRGPHDTPGHWLVTAAKLVSDGGKIGMHVKFALLDY 899
+ I V+AME+LG GFD ASDFRLKF K+CP+ GRLV+LD+S+RR+VV+PGG I +V ++IRCDKGD IRFKSDVL FNQMSELLNQKSS+ GKVPSGY NA+FDLSG+WLND+A+A +LAFDGYF+SLYYLHL ASPLVLHD+VKK+VP HW+PASLSRFI+ YGTHIIVG+ VGGQD++C+KQ+PSS +PPA+L+ +L+DLGD FSD SPL E K ++GK+KVPEVFNRMLQ HTMQFTSITETSSKDGLTII SKRGGDVF+QSHS WLQTVA++P+ I FKLVPITSLL+G+PGSGYLSHAINLYLRYKPALEDL CFLEFQVP QWAPLFCELPL HQRK +SCP+LQF FGPK+ V TQV SG+KPV+GLRL+LEGKKCN LAIHVQHLSSLPN+M SVN+ CQWRGSDDYES++QFL+PVRW ++SNVCSSVV+HDP+W+QG E+ G FVVTGA LVSKG+WPKT+LHLRLLFTYLPNCTIRKTEWAA + + +S FLTN+STTF+FTQR TD APKQLPAALNSGVYP+GPPVP+RS KLL+YVD E+ RGP+DTPGHWLVTAAKLV++GGKIG+HVKFALLD+
Sbjct: 7 RKRIEVKAMEALGCGFDFASDFRLKFVKRCPNG--GRLVILDESNRRNVVIPGGV--TIPDVSENIRCDKGDHIRFKSDVLEFNQMSELLNQKSSIHGKVPSGYLNAIFDLSGAWLNDSADAKYLAFDGYFVSLYYLHLTASPLVLHDQVKKAVPPHWDPASLSRFIQAYGTHIIVGMGVGGQDLLCVKQKPSSTVPPAELKAHLDDLGDCLFSDEASPLPEWKAKEGKKKVPEVFNRMLQSHTMQFTSITETSSKDGLTIIWSKRGGDVFAQSHSKWLQTVAAYPDGILFKLVPITSLLTGIPGSGYLSHAINLYLRYKPALEDLQCFLEFQVPSQWAPLFCELPLSHQRKVASCPALQFCLFGPKLCVRPTQVTSGQKPVIGLRLYLEGKKCNHLAIHVQHLSSLPNIMASKSVNNLTLCKPCQWRGSDDYESSDQFLDPVRWPRYSNVCSSVVKHDPSWMQG-ETSGVFVVTGAHLVSKGKWPKTVLHLRLLFTYLPNCTIRKTEWAATPEGTHRSSFLTNLSTTFTFTQRTKTDAAPKQLPAALNSGVYPDGPPVPVRSTKLLKYVDTAEIARGPYDTPGHWLVTAAKLVTEGGKIGLHVKFALLDF 612
BLAST of DCAR_023802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6ITX5 ((Macpf domain-containing protein {ECO:0000313|EMBL:OIT07700.1}))
HSP 1 Score: 971.844 bits (2511), Expect = 0.000e+0
Identity = 463/610 (75.90%), Postives = 534/610 (87.54%), Query Frame = 0
Match: A0A1J6ITX5 ((Macpf domain-containing protein {ECO:0000313|EMBL:OIT07700.1}))
HSP 1 Score: 971.844 bits (2511), Expect = 0.000e+0
Identity = 463/610 (75.90%), Postives = 534/610 (87.54%), Query Frame = 0
Query: 293 KAAIGVRAMESLGLGFDLASDFRLKFAKKCPDSADGRLVVLDDSSRRDVVLPGGGGGVIRNVPDSIRCDKGDRIRFKSDVLTFNQMSELLNQKSSVQGKVPSGYFNAMFDLSGSWLNDAAEADHLAFDGYFISLYYLHLIASPLVLHDKVKKSVPSHWNPASLSRFIRTYGTHIIVGLAVGGQDIICIKQRPSSVIPPADLRGYLEDLGDHFFSDGRSPLLERKTRDGKQKVPEVFNRMLQQHTMQFTSITETSSKDGLTIISSKRGGDVFSQSHSNWLQTVASHPEAISFKLVPITSLLSGVPGSGYLSHAINLYLRYKPALEDLHCFLEFQVPRQWAPLFCELPLRHQRKKSSCPSLQFAFFGPKISVSSTQVGSGKKPVVGLRLFLEGKKCNQLAIHVQHLSSLPNMMELASVNSSV--ACQWRGSDDYESNEQFLEPVRWKKFSNVCSSVVRHDPNWLQGQESGGAFVVTGAQLVSKGQWPKTILHLRLLFTYLPNCTIRKTEWAAAQQSSRKSGFLTNISTTFSFTQRAVTD-APKQLPAALNSGVYPEGPPVPLRSKKLLRYVDVNEVVRGPHDTPGHWLVTAAKLVSDGGKIGMHVKFALLDY 899
+ I V+A E+LG GFD ASDFRLKF KKC S GRLV+LD+ +RR+VV+PGG I +V ++IRCDKGD IRFKSDVL FNQMSELLNQKSSV GKVPSGY NAMFDLSG+WLND+A+A +LAFDGYF+SLYYLHL ASPLVL D+VKK+VP HW+PASLSRFIRTYGTHIIVG+ VGGQD++C+KQ+PSS +PPA+L+GYL+DLGD FSDG SPL E K R+ K+KVPEVFNRMLQ HTMQFTSITETSSKDGLTII SKRGGDVF+QSHS WLQ+VA++P+ I F+LVPITSLL+G+PGSGYLSHAINLYLRYKPALEDL CFLEFQVP QWAPLFCELPLRHQR+ +SCP+LQF FGPKI VS TQV SG+KPV+GLRL+LEGKK NQLAIHVQHLSSLPN+M S N ++ CQWRGSDDYES++QFLEPVRW ++SNVCSSVV+HDP+W+QG E+ G FVV GAQL+SKG+WPKT+LHLRLLFT+LPNCTIRKTEWAA + + +S FLTN+STTF+FTQR D APKQ PAALNSGVYPEGPPVP+RS KLL+YVD EV RGP+DTPGHWLVTAAKLV++GGKIG+HVKFALLD+
Sbjct: 7 RKPIEVKATEALGCGFDFASDFRLKFVKKC--SNGGRLVILDERNRRNVVVPGGV--TIPDVSENIRCDKGDHIRFKSDVLEFNQMSELLNQKSSVHGKVPSGYLNAMFDLSGAWLNDSADAKYLAFDGYFVSLYYLHLTASPLVLQDQVKKAVPPHWDPASLSRFIRTYGTHIIVGMGVGGQDLLCVKQKPSSGVPPAELKGYLDDLGDCLFSDGTSPLPEMKARESKKKVPEVFNRMLQSHTMQFTSITETSSKDGLTIIWSKRGGDVFAQSHSKWLQSVAAYPDGILFRLVPITSLLTGIPGSGYLSHAINLYLRYKPALEDLQCFLEFQVPTQWAPLFCELPLRHQRRVASCPALQFCLFGPKICVSPTQVTSGEKPVIGLRLYLEGKKFNQLAIHVQHLSSLPNIMTSKSANPTLRKPCQWRGSDDYESSDQFLEPVRWPRYSNVCSSVVKHDPSWMQG-ETSGVFVVAGAQLISKGKWPKTVLHLRLLFTHLPNCTIRKTEWAATPEGTHRSSFLTNLSTTFTFTQRTKADAAPKQHPAALNSGVYPEGPPVPVRSTKLLKYVDTAEVARGPYDTPGHWLVTAAKLVTEGGKIGLHVKFALLDF 611
BLAST of DCAR_023802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6N2BIS2 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412})
HSP 1 Score: 971.459 bits (2510), Expect = 0.000e+0
Identity = 459/611 (75.12%), Postives = 535/611 (87.56%), Query Frame = 0
Match: A0A6N2BIS2 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412})
HSP 1 Score: 971.459 bits (2510), Expect = 0.000e+0
Identity = 459/611 (75.12%), Postives = 535/611 (87.56%), Query Frame = 0
Query: 293 KAAIGVRAMESLGLGFDLASDFRLKFAKKCPDSADGRLVVLDDSSRRDVVLPGGGGGVIRNVPDSIRCDKGDRIRFKSDVLTFNQMSELLNQKSSVQGKVPSGYFNAMFDLSGSWLNDAAEADHLAFDGYFISLYYLHLIASPLVLHDKVKKSVPSHWNPASLSRFIRTYGTHIIVGLAVGGQDIICIKQRPSSVIPPADLRGYLEDLGDHFFSDGRSPLLERKTRDGKQKVPEVFNRMLQQHTMQFTSITETSSKDGLTIISSKRGGDVFSQSHSNWLQTVASHPEAISFKLVPITSLLSGVPGSGYLSHAINLYLRYKPALEDLHCFLEFQVPRQWAPLFCELPLRHQRKKSSCPSLQFAFFGPKISVSSTQVGSGKKPVVGLRLFLEGKKCNQLAIHVQHLSSLPNMMELASVNSSV---ACQWRGSDDYESNEQFLEPVRWKKFSNVCSSVVRHDPNWLQGQESGGAFVVTGAQLVSKGQWPKTILHLRLLFTYLPNCTIRKTEWAAAQQSSRKSGFLTNISTTFSFTQRAVTD-APKQLPAALNSGVYPEGPPVPLRSKKLLRYVDVNEVVRGPHDTPGHWLVTAAKLVSDGGKIGMHVKFALLDY 899
+ I V+AME+LG GFD ASDFRLKF K+CP+ GRLV+LD+S+RR+VV+PGG I +V ++IRCDKGD IRFKSDVL FNQMSELLNQKSS+ GKVPSGY NA+FDLSG+WLND+A+A +LAFDGYF+SLYYLHL ASPLVLHD+VKK+VP HW+PASLSRFI+ YGTHIIVG+ VGGQD++C+KQ+PSS +PPA+++ +L+DLGD FSD SPL E K ++GK+KVPEVFNRMLQ HTMQFTSITETSSKDGLTII SKRGGDVF+QSHS WLQTVA++P+ I FKLVPITSLL+G+PGSGYLSHAINLYLRYKPALEDL CFLEFQVP QWAPLFCELPL HQRK +SCP+LQF FGPK+ V TQV SG+KPV+GLRL+LEGKKCN LAIHVQHLSSLPN+M SVN+ CQWRGSDDYES++QFL+PVRW ++SNVCSSVV+HDP+W+QG E+ G FVVTGA LVSKG+WPKT+LHLRLLFTYLPNCTIRKTEWAA + + +S FLTN+STTF+FTQR TD APKQLPAALNSGVYP GPPVP+RS KLL+YVD E+ RGP+DTPGHWLVTAAKLV++GGKIG+HVKFALLD+
Sbjct: 7 RKRIEVKAMEALGCGFDFASDFRLKFVKRCPNG--GRLVILDESNRRNVVIPGGV--TIPDVSENIRCDKGDHIRFKSDVLEFNQMSELLNQKSSIHGKVPSGYLNAIFDLSGAWLNDSADAKYLAFDGYFVSLYYLHLTASPLVLHDQVKKAVPPHWDPASLSRFIQAYGTHIIVGMGVGGQDLLCVKQKPSSTVPPAEIKAHLDDLGDCLFSDEASPLPEWKAKEGKKKVPEVFNRMLQSHTMQFTSITETSSKDGLTIIWSKRGGDVFAQSHSKWLQTVAAYPDGILFKLVPITSLLTGIPGSGYLSHAINLYLRYKPALEDLQCFLEFQVPSQWAPLFCELPLSHQRKVASCPALQFCLFGPKLCVRPTQVTSGQKPVIGLRLYLEGKKCNHLAIHVQHLSSLPNIMASKSVNNLTLCKPCQWRGSDDYESSDQFLDPVRWPRYSNVCSSVVKHDPSWMQG-ETSGVFVVTGAHLVSKGKWPKTVLHLRLLFTYLPNCTIRKTEWAATPEGTHRSSFLTNLSTTFTFTQRTKTDAAPKQLPAALNSGVYPNGPPVPVRSTKLLKYVDTAEIARGPYDTPGHWLVTAAKLVTEGGKIGLHVKFALLDF 612
BLAST of DCAR_023802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7C0I1 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412} (Fragment))
HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0
Identity = 467/599 (77.96%), Postives = 534/599 (89.15%), Query Frame = 0
Match: A0A5B7C0I1 (MACPF domain-containing protein {ECO:0000259|PROSITE:PS51412} (Fragment))
HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0
Identity = 467/599 (77.96%), Postives = 534/599 (89.15%), Query Frame = 0
Query: 296 IGVRAMESLGLGFDLASDFRLKFAKKCPDSADGRLVVLDDSSRRDVVLPGGGGGVIRNVPDSIRCDKGDRIRFKSDVLTFNQMSELLNQKSSVQGKVPSGYFNAMFDLSGSWLNDAAEADHLAFDGYFISLYYLHLIASPLVLHDKVKKSVPSHWNPASLSRFIRTYGTHIIVGLAVGGQDIICIKQRPSSVIPPADLRGYLEDLGDHFFSDGRSP-LLERKTRDGKQKVPEVFNRMLQQHTMQFTSITETSSKDGLTIISSKRGGDVFSQSHSNWLQTVASHPEAISFKLVPITSLLSGVPGSGYLSHAINLYLRYKPALEDLHCFLEFQVPRQWAPLFCELPLRHQRKKSSCPSLQFAFFGPKISVSSTQVGSGKKPVVGLRLFLEGKKCNQLAIHVQHLSSLPNMMELASVN--SSVACQWRGSDDYESNEQFLEPVRWKKFSNVCSSVVRHDPNWLQGQESGGAFVVTGAQLVSKGQWPKTILHLRLLFTYLPNCTIRKTEWAAAQQSSRKSGFLTNISTTFSFTQRAVTDAPKQLPAALNSGVYPEGPPVPLRSKKLLRYVDVNEVVRGPHDTPGHWLVTAAKLVSDGGKIGMH 891
I +RAME+LG GFDLASDFRLKFAK P G+LV +D+ ++RD+V+PGG I+ V + IR DKGDRIRFKSDVL FN+MS LLNQKSSVQGK+PSGY N++FDLSG+WLNDAA+A +LAFDGYFISLYYLHL ASPLVL DKVKKSVP HW+PASLSRFI+ YGTHIIVG+AVGGQD++C+KQ+PSS IPPA+LRGYLEDLGD FSDGRSP LLERKTRDGKQKVPEVFNRMLQ HTMQFTSITETSSKDGLTII SKRGGDVFSQSHS WLQTVA++PEAI FK VPITSLL+GVPGSGYLSHAINLYLRYKPA EDL FLEFQVP QW+PLFCELPLRHQR+ SCPSLQF+F GPKI VS TQV SG+KPV GLRL+LEGKKCN+LAIHVQHLSSLPN+M L+SV+ S CQWRGSDDYES +QFLEPV+WK++SNVCSSVV+HDP+W++G ES G F+VTGAQL+SKG+WPKT+LHLRLL+T+LP+CTIRKTEWAAA ++SRK+ FL N+STT +FTQR VTDAP+QLPAAL+SGVYP+GPP+P+ S KLL+YVD+ EVVRGPHD PGHWLVTAAKLVS+GGKIG+H
Sbjct: 12 IEIRAMEALGSGFDLASDFRLKFAKGYP--GGGKLVEIDEVNKRDIVIPGGV--TIQGVSEGIRYDKGDRIRFKSDVLEFNEMSVLLNQKSSVQGKIPSGYLNSVFDLSGAWLNDAADAKYLAFDGYFISLYYLHLTASPLVLRDKVKKSVPPHWDPASLSRFIQIYGTHIIVGMAVGGQDLLCVKQKPSSKIPPAELRGYLEDLGDCLFSDGRSPSLLERKTRDGKQKVPEVFNRMLQSHTMQFTSITETSSKDGLTIIWSKRGGDVFSQSHSKWLQTVATNPEAILFKFVPITSLLTGVPGSGYLSHAINLYLRYKPAPEDLQYFLEFQVPSQWSPLFCELPLRHQRRMVSCPSLQFSFMGPKIHVSPTQVSSGQKPVTGLRLYLEGKKCNRLAIHVQHLSSLPNIMTLSSVSPTSCRPCQWRGSDDYESIDQFLEPVKWKRYSNVCSSVVKHDPDWMRG-ESSGVFIVTGAQLISKGKWPKTVLHLRLLYTHLPSCTIRKTEWAAAPEASRKASFLMNLSTTLTFTQRTVTDAPRQLPAALDSGVYPDGPPMPVCSTKLLKYVDIAEVVRGPHDNPGHWLVTAAKLVSEGGKIGLH 605
BLAST of DCAR_023802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9TJ28 ((MACPF domain-containing protein At4g24290 {ECO:0000313|RefSeq:XP_011084156.1}))
HSP 1 Score: 964.911 bits (2493), Expect = 0.000e+0
Identity = 462/609 (75.86%), Postives = 532/609 (87.36%), Query Frame = 0
Match: A0A6I9TJ28 ((MACPF domain-containing protein At4g24290 {ECO:0000313|RefSeq:XP_011084156.1}))
HSP 1 Score: 964.911 bits (2493), Expect = 0.000e+0
Identity = 462/609 (75.86%), Postives = 532/609 (87.36%), Query Frame = 0
Query: 293 KAAIGVRAMESLGLGFDLASDFRLKFAKKCPDSADGRLVVLDDSSRRDVVLPGGGGGVIRNVPDSIRCDKGDRIRFKSDVLTFNQMSELLNQKSSVQGKVPSGYFNAMFDLSGSWLNDAAEADHLAFDGYFISLYYLHLIASPLVLHDKVKKSVPSHWNPASLSRFIRTYGTHIIVGLAVGGQDIICIKQRPSSVIPPADLRGYLEDLGDHFFSDGRSPLLERKTRDGKQKVPEVFNRMLQQHTMQFTSITETSSKDGLTIISSKRGGDVFSQSHSNWLQTVASHPEAISFKLVPITSLLSGVPGSGYLSHAINLYLRYKPALEDLHCFLEFQVPRQWAPLFCELPLRHQRKKSSCPSLQFAFFGPKISVSSTQVGSGKKPVVGLRLFLEGKKCNQLAIHVQHLSSLPNMMELASVNSSV-ACQWRGSDDYESNEQFLEPVRWKKFSNVCSSVVRHDPNWLQGQESGGAFVVTGAQLVSKGQWPKTILHLRLLFTYLPNCTIRKTEWAAAQQSSRKSGFLTNISTTFSFTQRAVTDAPKQLPAALNSGVYPEGPPVPLRSKKLLRYVDVNEVVRGPHDTPGHWLVTAAKLVSDGGKIGMHVKFALLDYT 900
K I VRA E+LG GFDLASDFRLKF K+CP+ GRLVVLD +RDVV+PGG +I +VP+ IR DKGD IRFKSDVL FNQMSELLNQKSS+QGKVPSGY NA+FDLSG+WLNDAA+A +LAFDGYFISLYYLHL SPLVLHD VKKSVPS W+PASLSRFI+TYGTHI+VG+AVGGQD++C+KQRPSS IPPA+L+GYLE+LGD FSD SP+LER T+D K+KVPEVF+RMLQ HTMQFTSITETSSKDGLT+I SKRGGDVF+QSHS WLQT+A++PEAI FK VPITSLL+G+PGSGYLSHAINLYLRYKP LEDL FLEFQVPRQWAPLFCELPLRHQR+K+S P LQF+ GPKI VSSTQV S +KPV+GLRL+LEGKK N+LAIHVQHLSSLPN+M L S N ++ QWRGSDDYES +QFLEPVRWK++SNVCSSVV+HDP+W+QG ES G F+VTGAQLV KG+WP+ +LHLRLL+T++PNCTIRKTEWA+A ++SRKS FLTN+STTF+FTQR V DA KQ PA LNSGVYP+GPPVP+RS K+L+YVD EV RGP+D PGHWLVTAAKLV +G KIG+ VKFALLDY+
Sbjct: 13 KRPIEVRATEALGQGFDLASDFRLKFVKRCPNG--GRLVVLDGQRKRDVVVPGGV--MIPSVPECIRVDKGDHIRFKSDVLQFNQMSELLNQKSSIQGKVPSGYLNAIFDLSGAWLNDAADAKYLAFDGYFISLYYLHLTTSPLVLHDHVKKSVPSRWDPASLSRFIQTYGTHIVVGMAVGGQDLLCVKQRPSSPIPPAELKGYLEELGDCLFSDTNSPILERTTKDNKKKVPEVFSRMLQAHTMQFTSITETSSKDGLTLIWSKRGGDVFAQSHSRWLQTMAANPEAILFKFVPITSLLNGIPGSGYLSHAINLYLRYKPTLEDLPYFLEFQVPRQWAPLFCELPLRHQRRKASFPFLQFSCLGPKIYVSSTQVTSDQKPVIGLRLYLEGKKSNRLAIHVQHLSSLPNIMTLTSTNPTIHKPQWRGSDDYESCDQFLEPVRWKRYSNVCSSVVKHDPSWVQG-ESSGVFIVTGAQLVIKGKWPRKVLHLRLLYTHIPNCTIRKTEWASAPEASRKSSFLTNLSTTFTFTQRTVADAAKQPPATLNSGVYPDGPPVPVRSMKMLKYVDATEVARGPYDNPGHWLVTAAKLVVEGRKIGLQVKFALLDYS 616
BLAST of DCAR_023802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6S0U1 ((MACPF domain-containing protein {ECO:0000313|EMBL:PSS35911.1}))
HSP 1 Score: 964.526 bits (2492), Expect = 0.000e+0
Identity = 465/607 (76.61%), Postives = 528/607 (86.99%), Query Frame = 0
Match: A0A2R6S0U1 ((MACPF domain-containing protein {ECO:0000313|EMBL:PSS35911.1}))
HSP 1 Score: 964.526 bits (2492), Expect = 0.000e+0
Identity = 465/607 (76.61%), Postives = 528/607 (86.99%), Query Frame = 0
Query: 296 IGVRAMESLGLGFDLASDFRLKFAKKCPDSADGRLVVLDDSSRRDVVLPGGGGGVIRNVPDSIRCDKGDRIRFKSDVLTFNQMSELLNQKSSVQGKVPSGYFNAMFDLSGSWLNDAAEADHLAFDGYFISLYYLHLIASPLVLHDKVKKSVPSHWNPASLSRFIRTYGTHIIVGLAVGGQDIICIKQRPSSV-IPPADLRGYLEDLGDHFFSDGRSPLLERKTRDGKQKVPEVFNRMLQQHTMQFTSITETSSKDGLTIISSKRGGDVFSQSHSNWLQTVASHPEAISFKLVPITSLLSGVPGSGYLSHAINLYLRYKPALEDLHCFLEFQVPRQWAPLFCELPLRHQRKKSSCPSLQFAFFGPKISVSSTQVGSGKKPVVGLRLFLEGKKCNQLAIHVQHLSSLPNMMELASVNSSV--ACQWRGSDDYESNEQFLEPVRWKKFSNVCSSVVRHDPNWLQGQESGGAFVVTGAQLVSKGQWPKTILHLRLLFTYLPNCTIRKTEWAAAQQSSRKSGFLTNISTTFSFTQRAVTDAPKQLPAALNSGVYPEGPPVPLRSKKLLRYVDVNEVVRGPHDTPGHWLVTAAKLVSDGGKIGMHVKFALLDY 899
I VRAME+LGLGFDLASDFRLKFAK CP GRLVVLD+ S+RD+V+PGG IR V + IRCDKGDRIRFKSDVL FNQMSELLNQKSSVQGKVPSGY NA+FDL+G+WL DA +A +LAFDGYFISLYYLHL ASPLVLHDKVK SVPSHWNPASLSRFI+TYGTHIIVG+A+GGQD++C++Q+PSSV IPPA+LRGYLEDLGD FSD SP L KTR GKQKVP+VF RMLQ TMQFT+ITETSSKDGLT+I SKRGGDVFS SHS WLQTVA++P+AI FK VPITSLL+GVPGSGYLSHAINLYLRYKPALEDL FLEFQVPRQWAP+FCELPLRHQR+K SCP+LQF F GPK+ +SSTQV +G+KPV+GLRL+LEGKK N+LAIHV+HLSS+PN+M S +SS CQWRGS+DYE + QFLEPV WK++S VCSSVV+H+PNW+QG E G FVVTGAQL+SKG+WPKT+LH+RLLFT+LPNCTIRKTEW +A + RK L N+STTF+FTQR D PKQLP+ALNSGVYPEGPPVP+RS KLL+YVD EVVRGPHD PGHWLVTAAKLV++G KIG+HVKFALLDY
Sbjct: 8 IEVRAMEALGLGFDLASDFRLKFAKGCP--GGGRLVVLDEGSKRDIVVPGGV--TIRGVSEDIRCDKGDRIRFKSDVLDFNQMSELLNQKSSVQGKVPSGYLNAIFDLTGAWLTDAGDAKYLAFDGYFISLYYLHLTASPLVLHDKVKTSVPSHWNPASLSRFIQTYGTHIIVGMAIGGQDLLCVRQKPSSVTIPPAELRGYLEDLGDCLFSDRMSPPLLEKTRGGKQKVPDVFKRMLQSPTMQFTTITETSSKDGLTLIWSKRGGDVFSYSHSKWLQTVAANPDAILFKFVPITSLLTGVPGSGYLSHAINLYLRYKPALEDLQYFLEFQVPRQWAPMFCELPLRHQRRKGSCPTLQFRFLGPKMHISSTQVSTGQKPVIGLRLYLEGKKSNRLAIHVEHLSSVPNIMAFTSADSSTCRPCQWRGSNDYELSNQFLEPVNWKRYSKVCSSVVQHNPNWIQG-EKPGVFVVTGAQLISKGKWPKTVLHIRLLFTHLPNCTIRKTEWTSAPAACRKGSLLVNLSTTFTFTQRT-DDPPKQLPSALNSGVYPEGPPVPVRSGKLLKYVDTAEVVRGPHDAPGHWLVTAAKLVTEGAKIGLHVKFALLDY 608
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6ZBL7 | E-Value: 0.000e+0, PID: 77.85 | MACPF domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A5B6ZB14 | E-Value: 0.000e+0, PID: 78.17 | MACPF domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A5J5ADD4 | E-Value: 0.000e+0, PID: 77.91 | MACPF domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A2G9I3I6 | E-Value: 0.000e+0, PID: 76.48 | MACPF domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A3Q7I8X2 | E-Value: 0.000e+0, PID: 75.29 | MACPF domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A1J6ITX5 | E-Value: 0.000e+0, PID: 75.90 | (Macpf domain-containing protein {ECO:0000313|EMBL... [more] |
| A0A6N2BIS2 | E-Value: 0.000e+0, PID: 75.12 | MACPF domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A5B7C0I1 | E-Value: 0.000e+0, PID: 77.96 | MACPF domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A6I9TJ28 | E-Value: 0.000e+0, PID: 75.86 | (MACPF domain-containing protein At4g24290 {ECO:00... [more] |
| A0A2R6S0U1 | E-Value: 0.000e+0, PID: 76.61 | (MACPF domain-containing protein {ECO:0000313|EMBL... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |