Resource Type:
Polypeptide
Name:
DCAR_024514
Identifier:
DCAR_024514.mRNA-protein
Sequence:
MYSFDIYSVPLDSKNSAPLSELRLTDGHSLNFNGQFVTSTNIIREQQQQQ
QQRAIELVYATERGGVSTIYQDIIFNPTPQGLRREALEVSAQRVELLSGD
GVSMKDRPSLVGDSLIYVSTHENPGVPRASWAAVYSTQLSTGLTRRLSPY
GVADFSPAVSPSGVWTAVASLGDKGWNGEVEELGTDVFVFSTRDGSNRVK
VVEHGGWPSWADEFTLYFHRRGDDGWWSIYKAILPKNGELSVDSVLTQRV
TPPGVHSFTPAACGNESLVAVATRRSGSDYRHIEIFDLKAKKYRELTRPI
TPDAHHFSPFCSADSKMVGYHKCRGSSRGMKSEKPLFLENLRSPMPEISL
FRVDGSFPSFSPDGNRVAFVDFPGLYVANMDGSGRRQVLSDMAFATAWDP
KRKGVVYTSTGPTFETESTEVDIVSVNVDDNDLESSYKKLTHGGANNAFP
WPSPDGKWVVFRSGRSGHKNLYIMDAVEGETGGLHRLTEGPWSDTMCNWS
PDGEWIAFASDREIVGSGGFELYLIHPNGTGLRKLVQSGSVGRTNHPYFS
PDSKKIAFTSDYGAVSAEPISNPHQYQPYGDIYTINVDGSGLKRLTHNSY
EDGTPAWGPNYIQPVDVESAYNAAQCAFEDLSWLQIDSPASASHRNRVED
YNGSTKIQCGG*
Sequence Length:
662
Sequence Checksum:
f9094e49d756c8c404548a6e96b08d1b
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_024514, derives from mRNA, DCAR_024514. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_024514 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_024514 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BD34 ((Uncharacterized protein {ECO:0000313|EMBL:MPA66128.1}))
HSP 1 Score: 898.271 bits (2320), Expect = 0.000e+0
Identity = 443/675 (65.63%), Postives = 536/675 (79.41%), Query Frame = 0
Match: A0A5B7BD34 ((Uncharacterized protein {ECO:0000313|EMBL:MPA66128.1}))
HSP 1 Score: 898.271 bits (2320), Expect = 0.000e+0
Identity = 443/675 (65.63%), Postives = 536/675 (79.41%), Query Frame = 0
Query: 2 YSFDIYSVP-LDSKNSAPLSELRLTDGHSLNFNGQFVTSTNIIREQQQQQQ-------QRAIELVYATERGGVSTIYQDIIFNPTPQGLR-REALEVSAQRVEL------LSGDGVSMKDRPSLVGDSLIYVSTHENPGVPRASWAAVYSTQLSTGLTRRLSPYGVADFSPAVSPSGVWTAVASLGDKGWNGEVEELGTDVFVFSTRDGSNRVKVVEHGGWPSWADEFTLYFHRRGDDGWWSIYKAILPKNGELSVDSVLTQRVTPPGVHSFTPAA-CGNESLVAVATRRSGSDYRHIEIFDLKAKKYRELTRPITPDAHHFSPFCSADSKMVGYHKCRGSSRGMKSEKPLFLENLRSPMPEISLFRVDGSFPSFSPDGNRVAFVDFPGLYVANMDGSGRRQVLSDMAFATAWDPKRKGVVYTSTGPTFETESTEVDIVSVNVDDNDLESSYKKLTHGGANNAFPWPSPDGKWVVFRSGRSGHKNLYIMDAVEGETGGLHRLTEGPWSDTMCNWSPDGEWIAFASDREIVGSGGFELYLIHPNGTGLRKLVQSGSVGRTNHPYFSPDSKKIAFTSDYGAVSAEPISNPHQYQPYGDIYTINVDGSGLKRLTHNSYEDGTPAWGPNYIQPVDVESAYNAAQCAFEDLSWLQIDSPASASHRNRVEDYNGSTKIQCG 660
Y+FDIY++P +D +A +EL++TDG S+NFNG F++ ++ Q ++ L+Y TER G S IY D I+ +P R R AL+V RV++ S +SMKDRPS+VG+ L+YVSTHEN GVPR SWAAVYSTQL TGLTRRL+PYGVADFSP+VSPSGVWTAVAS G++GW+GEVEEL TD+++ TRDGSNRVKVVEHGGWPSWADE TLYFHRR +DGWW +Y+A LP+NG +SVDSV+TQR+TPPG+H FTPAA N+S +AVATRR SDYRHIE+FD+ +K++RE+TRP++P HH +PF S DS VGYH+CRGS+ G +S K L LEN++SP+PEISLFR+DGSFPSFSP+G+R+A+V+FPG+YV N DGSGRR+V + AFATAWDPK +GVVYTS GPTF EST+VDI+S+NVDD++L SYKKLT GG NNAFP PSPDGKWVVFRSGRSGHKNLYIMDA++GE GGLHRLTEGPWSDTM NWSPDG+WI FA+DRE GSG F+LY++HPNGTGLRK++QSGS GRTNHP FSPD K I FTSDY AVSAEPISNPH YQPYGDI+TI DGS ++RLTHNSYEDGTPAWGP++++PVDVE + QC+FED WL+I +R GSTK QCG
Sbjct: 46 YAFDIYTLPTMDPPTNA--NELQITDGESVNFNGHFLSPSSSSILSLLPNQILSLNSDPPSLHLIYVTERNGSSNIYLDAIYYDSPDHTRKRSALQV-PNRVQVPLVGSEQSNGRISMKDRPSVVGEYLVYVSTHENSGVPRTSWAAVYSTQLKTGLTRRLTPYGVADFSPSVSPSGVWTAVASHGERGWDGEVEELSTDIYILMTRDGSNRVKVVEHGGWPSWADESTLYFHRRTEDGWWGVYRATLPENGPVSVDSVVTQRLTPPGLHVFTPAASIANKSFIAVATRRPDSDYRHIELFDVVSKEFREVTRPVSPRTHHLNPFISPDSTRVGYHRCRGSNNGGQS-KHLLLENIQSPLPEISLFRIDGSFPSFSPEGDRIAYVNFPGVYVVNRDGSGRREVFTGTAFATAWDPKGRGVVYTSVGPTFAAESTKVDIISINVDDDEL--SYKKLTTGGENNAFPSPSPDGKWVVFRSGRSGHKNLYIMDAMDGEMGGLHRLTEGPWSDTMANWSPDGDWIVFATDRENPGSGSFKLYMVHPNGTGLRKVIQSGSGGRTNHPCFSPDGKSILFTSDYAAVSAEPISNPHHYQPYGDIFTIKSDGSEIRRLTHNSYEDGTPAWGPSFMRPVDVEWPID-GQCSFEDCHWLKI-----TQNRGHEGASVGSTKAQCG 708
BLAST of DCAR_024514 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BXH6 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8546437.1}))
HSP 1 Score: 890.567 bits (2300), Expect = 0.000e+0
Identity = 438/674 (64.99%), Postives = 536/674 (79.53%), Query Frame = 0
Match: A0A5J5BXH6 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8546437.1}))
HSP 1 Score: 890.567 bits (2300), Expect = 0.000e+0
Identity = 438/674 (64.99%), Postives = 536/674 (79.53%), Query Frame = 0
Query: 2 YSFDIYSVP-LDSKNSAPLSELRLTDGHSLNFNGQFVTSTNIIREQQQQQQ-------QRAIELVYATERGGVSTIYQDIIFNPTPQGLR-REALEVSAQ-RVELLSGDG----VSMKDRPSLVGDSLIYVSTHENPGVPRASWAAVYSTQLSTGLTRRLSPYGVADFSPAVSPSGVWTAVASLGDKGWNGEVEELGTDVFVFSTRDGSNRVKVVEHGGWPSWADEFTLYFHRRGDDGWWSIYKAILPKNGELSVDSVLTQRVTPPGVHSFTPAA-CGNESLVAVATRRSGSDYRHIEIFDLKAKKYRELTRPITPDAHHFSPFCSADSKMVGYHKCRGSSRGMKSEKPLFLENLRSPMPEISLFRVDGSFPSFSPDGNRVAFVDFPGLYVANMDGSGRRQVLSDMAFATAWDPKRKGVVYTSTGPTFETESTEVDIVSVNVDDNDLESSYKKLTHGGANNAFPWPSPDGKWVVFRSGRSGHKNLYIMDAVEGETGGLHRLTEGPWSDTMCNWSPDGEWIAFASDREIVGSGGFELYLIHPNGTGLRKLVQSGSVGRTNHPYFSPDSKKIAFTSDYGAVSAEPISNPHQYQPYGDIYTINVDGSGLKRLTHNSYEDGTPAWGPNYIQPVDVESAYNAAQCAFEDLSWLQIDSPASASHRNRVEDYNGSTKIQCG 660
Y+FDIY++P LD +A +EL++TDG S+NFNG F + ++ Q +I L+Y TER G S IY D I++ +P R R AL+V + ++ L+ G+ +SMKDRPS+V + L+YVSTHEN VPR SWAAVYSTQL TGLTRRL+PY VADFSP+VSPSGVWTAVAS G+KGW+GE EEL TD+++ TRDGSNRVKVVEHGGWPSWADE TLYFHRR +DGWWS+Y+A LP+NG +SVDSV+TQR+TPPG+H+FTPAA N+S ++VATRR SDYRHIE+FD+ +K++R++TRP++P HHF+PF S DS VGYH+CRG S G KS K L LEN++SP+PE SLFR+DGSFPSFSP+G+R+A+V+FPG+YV N DGSG+R+V + AF TAW PKRKGVVYTS GPTF TEST+VD++ +NVDD +L SYKKLT GG NNAFP PSPDGKWVVFRSGRSGHKNLYIMDA++GETGGLHRLTEGPW+DTM +WSP+G+WIAFA+DRE GSG FELY++HPNGTGLRK+VQSG GRTNHP FSPD K I FTSDY VSAEPISNPH YQPYGDI+TI DGS ++RLTHNSYEDGTPAWGP +++PVDVE + +C+FED WL+I +H + V +GS+KIQCG
Sbjct: 46 YAFDIYTLPTLDPPTNA--NELQITDGESVNFNGHFPSPSSSSILSLLPNQILSTSSDSPSIHLIYVTERNGSSNIYLDAIYSDSPDHTRKRSALQVPNRVQIPLVGGEQSNGRISMKDRPSVVDEYLVYVSTHENSCVPRTSWAAVYSTQLKTGLTRRLTPYDVADFSPSVSPSGVWTAVASYGEKGWSGEEEELSTDIYILMTRDGSNRVKVVEHGGWPSWADETTLYFHRRTEDGWWSVYRASLPENGPISVDSVVTQRLTPPGLHAFTPAASIANKSFISVATRRPDSDYRHIELFDVVSKEFRQVTRPVSPRTHHFNPFISPDSTRVGYHRCRGGSNGGKS-KHLLLENIQSPLPEFSLFRIDGSFPSFSPEGDRIAYVNFPGVYVVNRDGSGQREVFTGTAFTTAWHPKRKGVVYTSVGPTFATESTKVDVIVINVDDEEL--SYKKLTTGGENNAFPSPSPDGKWVVFRSGRSGHKNLYIMDAMDGETGGLHRLTEGPWTDTMASWSPEGDWIAFATDRENPGSGSFELYMVHPNGTGLRKVVQSGLGGRTNHPCFSPDGKSIVFTSDYAGVSAEPISNPHHYQPYGDIFTIRSDGSDIRRLTHNSYEDGTPAWGPTFMRPVDVEWPID-GECSFEDCHWLKI----RPNHGHEVAS-SGSSKIQCG 708
BLAST of DCAR_024514 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6IEC7 ((Uncharacterized protein {ECO:0000313|EMBL:OIT03254.1}))
HSP 1 Score: 890.182 bits (2299), Expect = 0.000e+0
Identity = 433/670 (64.63%), Postives = 528/670 (78.81%), Query Frame = 0
Match: A0A1J6IEC7 ((Uncharacterized protein {ECO:0000313|EMBL:OIT03254.1}))
HSP 1 Score: 890.182 bits (2299), Expect = 0.000e+0
Identity = 433/670 (64.63%), Postives = 528/670 (78.81%), Query Frame = 0
Query: 2 YSFDIYSVPLDSKNSAPLSELRLTDGHSLNFNGQFVTS-----TNIIREQQQQQQQRAIELVYATERGGVSTIYQDIIFNPTPQGLRREALEVSAQ----RVEL-LSGDGVSMKDRPSLVGDSLIYVSTHENPGVPRASWAAVYSTQLSTGLTRRLSPYGVADFSPAVSPSGVWTAVASLGDKGWNGEVEELGTDVFVFSTRDGSNRVKVVEHGGWPSWADEFTLYFHRRGDDGWWSIYKAILPKNGELSVDSVLTQRVTPPGVHSFTPAA-CGNESLVAVATRRSGSDYRHIEIFDLKAKKYRELTRPITPDAHHFSPFCSADSKMVGYHKCRGSSRGMKSEKPLFLENLRSPMPEISLFRVDGSFPSFSPDGNRVAFVDFPGLYVANMDGSGRRQVLSDMAFATAWDPKRKGVVYTSTGPTFETESTEVDIVSVNVDDNDLESSYKKLTHGGANNAFPWPSPDGKWVVFRSGRSGHKNLYIMDAVEGETGGLHRLTEGPWSDTMCNWSPDGEWIAFASDREIVGSGGFELYLIHPNGTGLRKLVQSGSVGRTNHPYFSPDSKKIAFTSDYGAVSAEPISNPHQYQPYGDIYTINVDGSGLKRLTHNSYEDGTPAWGPNYIQPVDVESAYNAAQCAFEDLSWLQIDSPASASHRNRVEDYNGSTKIQCG 660
Y+FDI+++P+ S + +EL+LTDG+S+NFNG F + + + + ++ L+Y TER G I+ D +F+ T RR L+ A+ R+++ L G VS+KD+PSLVG+SLIYVSTHE+ GVPR SWAAVYSTQLS+G RRL+P GVADFSPAVSPSGVWTAVAS G KGW G+V+EL TD++VFSTRDGS RVKVVEHGGWP+WADEFTLYFHR+ DDGWWS++KA+LPK G+L VDSV T RVTPPG+H+FTPAA N++L+AVATRR+ S+YRHIE+FD+ KK+ E+TRP +P AHH +PF S DS VGYHKCRG+ G S+ LF ENL+SP+P ISLFRVDGSFPSFSP G+R+A+V PGLYV N DGSG RQV + MAF+TAWDPKRKGVVYTS GPTF +E TEVD++S+NVDD DL SYK+LT GG NNAFP PSPDGKW+VFRSGRSGHKNLY+MDA+EGETGGL+RLT+GPW+DTMCNWSPDG+WIAFASDRE GSG FE++++HPNGTGLRK++QSG+ GRTNHPYFSPD K I FTSDY AVSAEPI+NPH YQPYGDI+ I DGS ++R+THNSYEDGTPAWGP +++PVDVE + C+FED WL + S H + GS KI+C
Sbjct: 52 YAFDIFALPVYSPTES--NELQLTDGNSVNFNGYFPATLPPSLISRLPDHCLNKETPPFHLIYVTERNGTHHIFYDAVFHGTS---RRAILDFPARTESTRIQVPLVGAHVSLKDKPSLVGESLIYVSTHEDSGVPRTSWAAVYSTQLSSGSARRLTPKGVADFSPAVSPSGVWTAVASYGKKGWTGDVQELDTDIYVFSTRDGSGRVKVVEHGGWPAWADEFTLYFHRKCDDGWWSVFKAVLPKAGQLGVDSVSTHRVTPPGLHAFTPAASTANKNLIAVATRRASSEYRHIELFDVALKKFTEITRPASPHAHHLNPFFSPDSSWVGYHKCRGTGNGRGSDTLLF-ENLKSPIPGISLFRVDGSFPSFSPSGDRIAYVKLPGLYVVNYDGSGLRQVSTRMAFSTAWDPKRKGVVYTSVGPTFASERTEVDVISINVDDEDL--SYKQLTTGGQNNAFPSPSPDGKWIVFRSGRSGHKNLYVMDALEGETGGLYRLTKGPWTDTMCNWSPDGDWIAFASDRENPGSGSFEMFMVHPNGTGLRKVIQSGTGGRTNHPYFSPDGKYIVFTSDYAAVSAEPIANPHHYQPYGDIFVIKSDGSEIRRMTHNSYEDGTPAWGPTFMKPVDVEWPNGGSPCSFEDCHWLNVRPNVSVVHASLGL---GSAKIECA 710
BLAST of DCAR_024514 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3Z6Q6 ((uncharacterized protein LOC107783614 {ECO:0000313|RefSeq:XP_016460083.1}))
HSP 1 Score: 885.945 bits (2288), Expect = 0.000e+0
Identity = 433/671 (64.53%), Postives = 528/671 (78.69%), Query Frame = 0
Match: A0A1S3Z6Q6 ((uncharacterized protein LOC107783614 {ECO:0000313|RefSeq:XP_016460083.1}))
HSP 1 Score: 885.945 bits (2288), Expect = 0.000e+0
Identity = 433/671 (64.53%), Postives = 528/671 (78.69%), Query Frame = 0
Query: 2 YSFDIYSVPLDSKNSAPLSELRLTDGHSLNFNGQFVTS-----TNIIREQQQQQQQRAIELVYATERGGVSTIYQDIIFNPTPQGLRREALEVSAQ----RVEL-LSGDGVSMKDRPSLVGDSLIYVSTHENPGVPRASWAAVYSTQLSTGLTRRLSPYGVADFSPAVSPSGVWTAVASLGDKGWNGEVEELGTDVFVFSTRDGSNRVKVVEHGGWPSWADEFTLYFHRRGDDGWWSIYKAILPKNGELSVDSVLTQRVTPPGVHSFTPAA-CGNESLVAVATRRSGSDYRHIEIFDLKAKKYRELTRPITPDAHHFSPFCSADSKMVGYHKCRGSSRGMKSEKPLFLENLRSPMPEISLFRVDGSFPSFSPDGNRVAFVDFPGLYVANMDGSGRRQVLSDMAFATAWDPKRKGVVYTSTGPTFETESTEVDIVSVNVDDNDLESSYKKLTHGGANNAFPWPSPDGKWVVFRSGRSGHKNLYIMDAVEGETGGLHRLTEGPWSDTMCNWSPDGEWIAFASDREIVGSGGFELYLIHPNGTGLRKLVQSGSVGRTNHPYFSPDSKKIAFTSDYGAVSAEPISNPHQYQPYGDIYTINVDGSGLKRLTHNSYEDGTPAWGPNYIQPVDVESAYNAAQCAFEDLSWLQIDSPASASHRN-RVEDYNGSTKIQCG 660
Y+FDI+++P+ S + +EL+LTDG+S+NFNG F+ + + + + + L+Y TER G I+ D +F+ T RR L+ A+ RV++ L G VS+KD+PSLVG+SLIYVSTHE+ GVPR SWAAVYSTQLS+G TRRL+P GVADFSPAVSPSGVWTAVAS G KGW GEV+EL TD++VF TRDGS RVKVVEHGGWP+WAD+FTLYFHR+ DDGWWS++KA+LPK G+L VDSV T RVTPPG+H+FTPAA N++L+AVATRR+ S+YRHIE+FD+ KK+ E+TRP +P AHH +PF S DS VGYHKCRG+ G S+ L LENL++P+P ISLFRVDGSFPSFSP G+R+A+V FPGLYV N DGSG RQV + MAF+TAWD KR GVVYTS GPTF +E TEVD++S+NVDD DL SYK+LT GG NNAFP PSPDGKW+VFRSGRSGHKNLY+MDA+EGETGGL+RLTEG W+DTMCNWSPDG+WIAFASDRE GSG FE++++HPNGTGLRK++QSG+ GRTNHPYFSPD K I FTSDY AVSAEPI+NPH YQPYGDI+ I DGS ++R+THNSYEDGTPAWGP +++PVDVE + C+FED WL + S H + R+ GS KI+C
Sbjct: 47 YAFDIFALPIYSPTES--NELQLTDGNSVNFNGYFLATLPPSLVSRLPDHSLNNETPPFHLIYVTERNGTHHIFYDAVFHGTS---RRAILDFPARTESTRVQVPLVGAHVSLKDKPSLVGESLIYVSTHEDSGVPRTSWAAVYSTQLSSGSTRRLTPKGVADFSPAVSPSGVWTAVASYGKKGWAGEVQELDTDIYVFLTRDGSVRVKVVEHGGWPAWADDFTLYFHRKCDDGWWSVFKAVLPKAGQLGVDSVSTHRVTPPGLHAFTPAASTANKNLIAVATRRASSEYRHIELFDVILKKFTEITRPASPHAHHLNPFFSPDSSWVGYHKCRGTGNGRGSDT-LLLENLKNPIPGISLFRVDGSFPSFSPSGDRIAYVKFPGLYVVNYDGSGLRQVSTKMAFSTAWDQKRNGVVYTSVGPTFASERTEVDVISINVDDKDL--SYKQLTTGGQNNAFPSPSPDGKWIVFRSGRSGHKNLYVMDALEGETGGLYRLTEGSWTDTMCNWSPDGDWIAFASDRENPGSGSFEMFMVHPNGTGLRKVIQSGTGGRTNHPYFSPDGKYIVFTSDYAAVSAEPIANPHHYQPYGDIFVIKSDGSEIRRMTHNSYEDGTPAWGPTFMKPVDVEWPNGGSPCSFEDCHWLNVRPNVSVVHASLRL----GSAKIECA 705
BLAST of DCAR_024514 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7XWJ4 ((uncharacterized protein LOC104242978 {ECO:0000313|RefSeq:XP_009796392.1}))
HSP 1 Score: 884.789 bits (2285), Expect = 0.000e+0
Identity = 432/671 (64.38%), Postives = 527/671 (78.54%), Query Frame = 0
Match: A0A1U7XWJ4 ((uncharacterized protein LOC104242978 {ECO:0000313|RefSeq:XP_009796392.1}))
HSP 1 Score: 884.789 bits (2285), Expect = 0.000e+0
Identity = 432/671 (64.38%), Postives = 527/671 (78.54%), Query Frame = 0
Query: 2 YSFDIYSVPLDSKNSAPLSELRLTDGHSLNFNGQFVTS-----TNIIREQQQQQQQRAIELVYATERGGVSTIYQDIIFNPTPQGLRREALEVSAQ----RVEL-LSGDGVSMKDRPSLVGDSLIYVSTHENPGVPRASWAAVYSTQLSTGLTRRLSPYGVADFSPAVSPSGVWTAVASLGDKGWNGEVEELGTDVFVFSTRDGSNRVKVVEHGGWPSWADEFTLYFHRRGDDGWWSIYKAILPKNGELSVDSVLTQRVTPPGVHSFTPAA-CGNESLVAVATRRSGSDYRHIEIFDLKAKKYRELTRPITPDAHHFSPFCSADSKMVGYHKCRGSSRGMKSEKPLFLENLRSPMPEISLFRVDGSFPSFSPDGNRVAFVDFPGLYVANMDGSGRRQVLSDMAFATAWDPKRKGVVYTSTGPTFETESTEVDIVSVNVDDNDLESSYKKLTHGGANNAFPWPSPDGKWVVFRSGRSGHKNLYIMDAVEGETGGLHRLTEGPWSDTMCNWSPDGEWIAFASDREIVGSGGFELYLIHPNGTGLRKLVQSGSVGRTNHPYFSPDSKKIAFTSDYGAVSAEPISNPHQYQPYGDIYTINVDGSGLKRLTHNSYEDGTPAWGPNYIQPVDVESAYNAAQCAFEDLSWLQIDSPASASHRN-RVEDYNGSTKIQCG 660
Y+FDI+++P+ S + +EL+LTDG+S+NFNG F+ + + + + + L+Y TER G I+ D +F+ T RR L+ A+ RV++ L G VS+KD+PSLVG+SLIYVSTHE+ GVPR SWAAVYSTQLS+G TRRL+P GVADFSPAVSPSGVWTAVAS G KGW G+V+EL TD++VF TRDGS RVKVVEHGGWP+WAD+FTLYFHR+ DDGWWS++KA+LPK G+L VDSV T RVTPPG+H+FTPAA N++L+AVATRR+ S+YRHIE+FD+ KK+ E+TRP +P AHH +PF S DS VGYHKCRG+ G S+ L LENL++P+P ISLFRVDGSFPSFSP G+R+A+V FPGLYV N DGSG RQV + MAF+TAWD KR GVVYTS GPTF +E TEVD++S+NVDD DL SYK LT GG NNAFP PSPDGKW+VFRSGRSGHKNLY+MDA+EGETGGL+RLTEG W+DTMCNWSPDG+WIAFASDRE GSG FE++++HPNGTGLRK++QSG+ GRTNHPYFSPD K I FTSDY AVSAEPI+NPH YQPYGDI+ I DGS ++R+THNSYEDGTPAWGP +++PVDVE + C+FED WL + S H + R+ GS KI+C
Sbjct: 47 YAFDIFALPIYSPTES--NELQLTDGNSVNFNGYFLATLPPSLVSRLPDHSLNNETPPFHLIYVTERNGTHHIFYDAVFHGTS---RRAILDFPARTESTRVQVPLVGAHVSLKDKPSLVGESLIYVSTHEDSGVPRTSWAAVYSTQLSSGSTRRLTPKGVADFSPAVSPSGVWTAVASYGKKGWTGDVQELDTDIYVFLTRDGSVRVKVVEHGGWPAWADDFTLYFHRKCDDGWWSVFKAVLPKAGQLGVDSVSTHRVTPPGLHAFTPAASTANKNLIAVATRRASSEYRHIELFDVILKKFTEITRPASPHAHHLNPFFSPDSSWVGYHKCRGTGNGRGSDT-LLLENLKNPIPGISLFRVDGSFPSFSPSGDRIAYVKFPGLYVVNYDGSGLRQVSTKMAFSTAWDQKRNGVVYTSVGPTFASERTEVDVISINVDDKDL--SYKHLTTGGQNNAFPSPSPDGKWIVFRSGRSGHKNLYVMDALEGETGGLYRLTEGSWTDTMCNWSPDGDWIAFASDRENPGSGSFEMFMVHPNGTGLRKVIQSGTGGRTNHPYFSPDGKYIVFTSDYAAVSAEPIANPHHYQPYGDIFVIKSDGSEIRRMTHNSYEDGTPAWGPTFMKPVDVEWPNGGSPCSFEDCHWLNVRPNVSVVHASLRL----GSAKIECA 705
BLAST of DCAR_024514 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1A642 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400015484}))
HSP 1 Score: 878.626 bits (2269), Expect = 0.000e+0
Identity = 437/678 (64.45%), Postives = 523/678 (77.14%), Query Frame = 0
Match: M1A642 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400015484}))
HSP 1 Score: 878.626 bits (2269), Expect = 0.000e+0
Identity = 437/678 (64.45%), Postives = 523/678 (77.14%), Query Frame = 0
Query: 2 YSFDIYSVPLDSKNSAPLSELRLTDGHSLNFNGQFVTS------TNIIREQQQQQQQRAIELVYATERGGVSTIYQDIIFNPTPQGLRREALEVSAQ----RVEL------LSGDGVSMKDRPSLVGDSLIYVSTHENPGVPRASWAAVYSTQLSTGLTRRLSPYGVADFSPAVSPSGVWTAVASLGDKGWNGEVEELGTDVFVFSTRDGSNRVKVVEHGGWPSWADEFTLYFHRRGDDGWWSIYKAILPKNGELSVDSVLTQRVTPPGVHSFTPAAC-GNESLVAVATRRSGSDYRHIEIFDLKAKKYRELTRPITPDAHHFSPFCSADSKMVGYHKCRGSSRGMKSEKPLFLENLRSPMPEISLFRVDGSFPSFSPDGNRVAFVDFPGLYVANMDGSGRRQVLSDMAFATAWDPKRKGVVYTSTGPTFETESTEVDIVSVNVDDNDLESSYKKLTHGGANNAFPWPSPDGKWVVFRSGRSGHKNLYIMDAVEGETGGLHRLTEGPWSDTMCNWSPDGEWIAFASDREIVGSGGFELYLIHPNGTGLRKLVQSGSVGRTNHPYFSPDSKKIAFTSDYGAVSAEPISNPHQYQPYGDIYTINVDGSGLKRLTHNSYEDGTPAWGPNYIQPVDVESAYNAAQCAFEDLSWLQIDSPASASHRNRVEDYN---GSTKIQC 659
Y+FDI+++P + P +E +LTDG+S+NFNG F S + + + + L+Y TER G ++ D +F+ G RR LE Q RV++ SG VSMKD+PSL G+ LIYVSTHE+ GVPR SWAAVYST L +GLTRRL+P GVADFSPAVSPSGVWTAVAS G+KGW+GEVEEL TD++VF TRDGS RVKVVEHGGWP+WADE+TLYFHRR DDGWWS++KA+LPK+ +DSV TQRVTPPG+H FTPA+ N++++AVATRR+GS+YRHIE+FD+ +KK+ E+T+P++P AHH +PF S DS VGYHKCRGS G S+ L LENLR+P+P ISLFR+DGSFPSFSP+G+R+A+V PGLYV N DGSG R++ S AF+TAWDPKRKGV+YTS GPTF +ESTEVDI+S+NVDD DL SYK++T GG NNAFP PSPDGKW+VFRSGRSGHKNLYIMDA+EGE GGL RLTEGPW+DTMCNWSPDGEWIAFASDRE GSG FE+Y+IHPNGTGL+K++QSG GRTNHPYFSPD K I FTSDY AVSAEPISNPH YQPYGDIY I DGS ++RLTHNSYEDGTPAWGP +I+PVDVE C+FED WL + AS V D + GS KI+C
Sbjct: 35 YAFDIFALP----TTHPQTEFQLTDGNSVNFNGNFPASLPPSLLSRLPDDDSVNSGKLPFHLIYVTERNGTHHVFYDAVFHGV--GERRAILEFPPQTESTRVQVPLVGFEQSGGRVSMKDKPSLTGEFLIYVSTHEDSGVPRTSWAAVYSTHLGSGLTRRLTPKGVADFSPAVSPSGVWTAVASYGEKGWSGEVEELATDIYVFMTRDGSGRVKVVEHGGWPTWADEYTLYFHRRCDDGWWSVFKAVLPKS---DIDSVSTQRVTPPGLHVFTPASSPANKNVIAVATRRAGSEYRHIELFDVVSKKFTEITKPVSPHAHHLNPFFSPDSSWVGYHKCRGSGNGRGSDT-LLLENLRNPIPGISLFRIDGSFPSFSPNGDRIAYVRLPGLYVVNYDGSGLRKISSRTAFSTAWDPKRKGVIYTSFGPTFASESTEVDIISINVDDEDL--SYKQMTIGGKNNAFPSPSPDGKWIVFRSGRSGHKNLYIMDALEGEAGGLRRLTEGPWTDTMCNWSPDGEWIAFASDRENPGSGSFEMYMIHPNGTGLKKVIQSGMGGRTNHPYFSPDGKYIVFTSDYAAVSAEPISNPHHYQPYGDIYVIKSDGSDIRRLTHNSYEDGTPAWGPTFIKPVDVEWPNGGHPCSFEDCHWLNVRPNAS------VMDASFGLGSAKIEC 694
BLAST of DCAR_024514 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4E278 ((Uncharacterized protein {ECO:0000313|EMBL:THG09951.1}))
HSP 1 Score: 877.47 bits (2266), Expect = 0.000e+0
Identity = 430/676 (63.61%), Postives = 524/676 (77.51%), Query Frame = 0
Match: A0A4S4E278 ((Uncharacterized protein {ECO:0000313|EMBL:THG09951.1}))
HSP 1 Score: 877.47 bits (2266), Expect = 0.000e+0
Identity = 430/676 (63.61%), Postives = 524/676 (77.51%), Query Frame = 0
Query: 2 YSFDIYSVPLDSKNSA---PLSELRLTDGHSLNFNGQFVTSTNIIREQQQQQQQRA-----IELVYATERGGVSTIYQDIIFNPTPQGLR-REALEVSAQ-RVELL-----SGDGVSMKDRPSLVGDSLIYVSTHENPGVPRASWAAVYSTQLSTGLTRRLSPYGVADFSPAVSPSGVWTAVASLGDKGWNGEVEELGTDVFVFSTRDGSNRVKVVEHGGWPSWADEFTLYFHRRGDDGWWSIYKAILPKNG-ELSVDSVLTQRVTPPGVHSFTPAA-CGNESLVAVATRRSGSDYRHIEIFDLKAKKYRELTRPITPDAHHFSPFCSADSKMVGYHKCRGSSRGMKSEKPLFLENLRSPMPEISLFRVDGSFPSFSPDGNRVAFVDFPGLYVANMDGSGRRQVLSDMAFATAWDPKRKGVVYTSTGPTFETESTEVDIVSVNVDDNDLESSYKKLTHGGANNAFPWPSPDGKWVVFRSGRSGHKNLYIMDAVEGETGGLHRLTEGPWSDTMCNWSPDGEWIAFASDREIVGSGGFELYLIHPNGTGLRKLVQSGSVGRTNHPYFSPDSKKIAFTSDYGAVSAEPISNPHQYQPYGDIYTINVDGSGLKRLTHNSYEDGTPAWGPNYIQPVDVESAYNAAQCAFEDLSWLQIDSPASASHRNRVEDYNGSTKIQCG 660
Y+FDIY++P+ NS P E ++TDGHS+N+NG F + ++ + L+Y TER G S+++ D ++ P R R L++ + +V LL S +SMKD+PSLVGD LIYVSTHE+ GVPR SWAAVYSTQL TGLTRRL+PYGVADFSPAVSPSGVWTAVAS G++GW GEVEEL TDV+VF T DGS+RVKVV+HGGWPSWAD+ TLYFHRR +DGWWS+Y+A LPK+ ++SVDSV+TQRVTPPG+H+FTPAA N++ +AVATRR S++RHIE+FD+ +K++ E+TRP++P+ HH +PF S DS +VGYH+CRGS G K L LEN++SP+PEISLFR+DG FPSFSP G+R+A+V FPGLYV DGSG RQV + AFATAWDPKRKGVVYTS GPTFE+EST+VD++S+NVDD D ESSY KLT GG NNAFP PSPDGKW+VFRSGRSGHKNLYIMDA++GE GGL+RLTEG W+DTMCNWSPDG+WI FASDRE GSG FELY++HPNGTGL+KLV SGS GR NHP+FSPD K I FT+DY VSAEPISNPHQYQPYG I+TI DGSG++RLTHNS+EDGTPAWGP +++PVDVE + QC+F+D WL +H Y S K+QCG
Sbjct: 47 YAFDIYTLPIQQPNSTQFNPPIEFQITDGHSVNYNGHFPSPSSTSTLLSLTSTTTPSSRPPLLLIYVTERNGSSSLFLDALYYDGPDITRKRSTLQIPTRVQVPLLITNQPSNGLISMKDKPSLVGDYLIYVSTHEDSGVPRTSWAAVYSTQLKTGLTRRLTPYGVADFSPAVSPSGVWTAVASSGERGWRGEVEELDTDVYVFRTEDGSDRVKVVDHGGWPSWADDSTLYFHRRSEDGWWSVYRASLPKDMVQISVDSVVTQRVTPPGLHAFTPAASVANKNFIAVATRRPDSEFRHIELFDVVSKEFTEVTRPVSPNYHHLNPFISPDSTLVGYHRCRGSDNGRKGNN-LLLENIQSPLPEISLFRIDGKFPSFSPTGDRIAYVKFPGLYVVKRDGSGLRQVFTGTAFATAWDPKRKGVVYTSVGPTFESESTKVDVISINVDD-DEESSYNKLTTGGENNAFPSPSPDGKWLVFRSGRSGHKNLYIMDALDGEKGGLYRLTEGLWTDTMCNWSPDGDWIVFASDREKPGSGSFELYMVHPNGTGLKKLVHSGSSGRANHPWFSPDGKTIVFTTDYAGVSAEPISNPHQYQPYGSIFTIRTDGSGIRRLTHNSFEDGTPAWGPKFMKPVDVEHPTDGPQCSFDDCHWLS----KFPNHSVEFAPYV-SMKVQCG 715
BLAST of DCAR_024514 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4E2V0 ((Uncharacterized protein {ECO:0000313|EMBL:THG10193.1}))
HSP 1 Score: 875.93 bits (2262), Expect = 0.000e+0
Identity = 425/660 (64.39%), Postives = 519/660 (78.64%), Query Frame = 0
Match: A0A4S4E2V0 ((Uncharacterized protein {ECO:0000313|EMBL:THG10193.1}))
HSP 1 Score: 875.93 bits (2262), Expect = 0.000e+0
Identity = 425/660 (64.39%), Postives = 519/660 (78.64%), Query Frame = 0
Query: 2 YSFDIYSVPLDSKNSA---PLSELRLTDGHSLNFNGQFVTSTNIIREQQQQQQQRAIEL-----VYATERGGVSTIYQDIIFNPTPQGLR-REALEVSAQ-RVELL-----SGDGVSMKDRPSLVGDSLIYVSTHENPGVPRASWAAVYSTQLSTGLTRRLSPYGVADFSPAVSPSGVWTAVASLGDKGWNGEVEELGTDVFVFSTRDGSNRVKVVEHGGWPSWADEFTLYFHRRGDDGWWSIYKAILPKNG-ELSVDSVLTQRVTPPGVHSFTPAA-CGNESLVAVATRRSGSDYRHIEIFDLKAKKYRELTRPITPDAHHFSPFCSADSKMVGYHKCRGSSRGMKSEKPLFLENLRSPMPEISLFRVDGSFPSFSPDGNRVAFVDFPGLYVANMDGSGRRQVLSDMAFATAWDPKRKGVVYTSTGPTFETESTEVDIVSVNVDDNDLESSYKKLTHGGANNAFPWPSPDGKWVVFRSGRSGHKNLYIMDAVEGETGGLHRLTEGPWSDTMCNWSPDGEWIAFASDREIVGSGGFELYLIHPNGTGLRKLVQSGSVGRTNHPYFSPDSKKIAFTSDYGAVSAEPISNPHQYQPYGDIYTINVDGSGLKRLTHNSYEDGTPAWGPNYIQPVDVESAYNAAQCAFEDLSWLQIDSPASASH 644
Y+FDIY++P+ NS P E ++TDGHS+N+NG F + ++ +Y TER G S+++ D ++ P R R L++ + +V LL S +SMKD+PSLVGD LIYVSTHE+ GVPR SWAAVYSTQL TGLTRRL+PYGVADFSPAVSPSGVWTAVAS G++GW GEVEEL TDV+VF T DGS+RVKVV+HGGWPSWAD+ TLYFHRR +DGWWS+Y+A LPK+ ++SVDSV+TQRVTPPG+H+FTPAA N++ +AVATRR S++RHIE+FD+ +K++ E+TRP++P+ HH +PF S DS +VGYH+CRGS G K L LEN++SP+PEISLFR+DGSFPSFSP G+R+A+V FPGLYV DGSG RQV + AFATAWDP RKGVVYTS GPTFE+EST+VD++S+NVDD D ESSYKKLT GG NNAFP PSPDGKW+VFRSGRSGHKNLYIMDA++GE GGL+RLTEG W+DTMCNWSPDG+WI FASDRE GSG FELY++HPNGTGL+KLV SGS GR NHP+FSPD K I FT+DY VSAEPISNPHQYQPYG I+TI+ DGSG++RLTHNS+EDGTPAWGP +++PVDVE + QC+F+D WL+ P + H
Sbjct: 47 YAFDIYTLPIQQPNSTQFNPPIEFQITDGHSVNYNGHFPSPSSTSTLLSLTSTTTPSSPPPLLLIYVTERNGSSSLFLDALYYDGPDITRKRSTLQIPTRVQVPLLITNQPSNGLISMKDKPSLVGDYLIYVSTHEDSGVPRTSWAAVYSTQLKTGLTRRLTPYGVADFSPAVSPSGVWTAVASSGERGWRGEVEELDTDVYVFRTEDGSDRVKVVDHGGWPSWADDSTLYFHRRSEDGWWSVYRASLPKDMVQISVDSVVTQRVTPPGLHAFTPAASVANKNFIAVATRRPDSEFRHIELFDVVSKEFTEVTRPVSPNYHHLNPFISPDSTLVGYHRCRGSDNGRKGNN-LLLENIQSPLPEISLFRIDGSFPSFSPTGDRIAYVKFPGLYVVKRDGSGLRQVFTGTAFATAWDPTRKGVVYTSVGPTFESESTKVDVISINVDD-DEESSYKKLTTGGENNAFPSPSPDGKWLVFRSGRSGHKNLYIMDALDGEKGGLYRLTEGLWTDTMCNWSPDGDWIVFASDREKPGSGSFELYMVHPNGTGLKKLVHSGSSGRANHPWFSPDGKTIVFTTDYAGVSAEPISNPHQYQPYGSIFTISTDGSGIRRLTHNSFEDGTPAWGPKFMKPVDVEHRTDGPQCSFDDCHWLRHTIPFMSPH 704
BLAST of DCAR_024514 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q154 ((Protein TolB like {ECO:0000313|EMBL:PSS00130.1}))
HSP 1 Score: 874.774 bits (2259), Expect = 0.000e+0
Identity = 427/667 (64.02%), Postives = 523/667 (78.41%), Query Frame = 0
Match: A0A2R6Q154 ((Protein TolB like {ECO:0000313|EMBL:PSS00130.1}))
HSP 1 Score: 874.774 bits (2259), Expect = 0.000e+0
Identity = 427/667 (64.02%), Postives = 523/667 (78.41%), Query Frame = 0
Query: 2 YSFDIYSVPLDSKNSAPLSELRLTDGHSLNFNGQFVTSTNIIREQQQQQQQRAIELVYATERGGVSTIYQDIIFNPTP-QGLRREALEVSAQ-RVELLSGD----GVSMKDRPSLVGDSLIYVSTHENPGVPRASWAAVYSTQLSTGLTRRLSPYGVADFSPAVSPSGVWTAVASLGDKGWNGEVEELGTDVFVFSTRDGSNRVKVVEHGGWPSWADEFTLYFHRRGDDGWWSIYKAILPKNGELSVDSVLTQRVTPPGVHSFTPAA-CGNESLVAVATRRSGSDYRHIEIFDLKAKKYRELTRPITPDAHHFSPFCSADSKMVGYHKCRGSSRGMKSEKPLFLENLRSPMPEISLFRVDGSFPSFSPDGNRVAFVDFPGLYVANMDGSGRRQVLSDMAFATAWDPKRKGVVYTSTGPTFETESTEVDIVSVNVDDNDLESSYKKLTHGGANNAFPWPSPDGKWVVFRSGRSGHKNLYIMDAVEGETGGLHRLTEGPWSDTMCNWSPDGEWIAFASDREIVGSGGFELYLIHPNGTGLRKLVQSGSVGRTNHPYFSPDSKKIAFTSDYGAVSAEPISNPHQYQPYGDIYTINVDGSGLKRLTHNSYEDGTPAWGPNYIQPVDVESAYNAAQCAFEDLSWLQIDSPASASHRNRVEDY-NGSTKIQCG 660
Y+FDIY++P+ + + P EL++TDG S+N+NG F T + Q + LVY TER G S IY D ++ P RR L+V + +V L+S D VSMKDRP+LVGD L+YVSTHE+ GVPR SWAAVY T+L TGLTRRL+PYGVADFSP+VSPSG WTAVAS G++GW GEVEEL TD+++F T DGS RVKV EHGGWPSWADE TLYFHRRGDDGWWSIY+AILPK+ ++S DSV+TQRVTPPG+H+FTPAA N+S VAVATRR S++RHIE+FD+ ++ E+TRP++P HHF+PF S DS VGYH+CRGS G KS L LEN++SP+ EISLFR+DGS+PSFSP+G+R+A+V FPGLYV N DGS RQ+ + AF+TAWDPKR+GVVY GPTF +E T+VD++S+NVDD+D S+YK+LT GG NNAFP PSPDGKWVVFRSGRSGHKNLYIMDA++GE GLHRLTEGPW+DTMCNWSP+G+WIAFASDRE GSG +EL+++HPNGTGL+K+VQSGS GRTNHP+FSPD K I FT+DY AVSAEPISNPH YQPYGDI+TI +DGSG++RLTHNS+EDGTPAWGP +++P+DVE + C+FED WL S + VE + S K+QCG
Sbjct: 45 YAFDIYTLPILGQRTNP-KELKITDGESVNYNGHFPTPSP---PSDQTPGPTPLNLVYVTERNGSSGIYLDALYYEGPDHNRRRSTLQVPNRVQVPLVSSDRSNGQVSMKDRPNLVGDYLVYVSTHEDSGVPRTSWAAVYWTRLGTGLTRRLTPYGVADFSPSVSPSGDWTAVASAGERGWRGEVEELDTDIYIFRTEDGSGRVKVTEHGGWPSWADESTLYFHRRGDDGWWSIYRAILPKSAQISTDSVVTQRVTPPGLHAFTPAASVANKSFVAVATRRPDSEFRHIELFDVVLNEFIEVTRPVSPHTHHFNPFLSPDSARVGYHRCRGSDNGRKSNL-LLLENIQSPLSEISLFRIDGSYPSFSPEGDRIAYVKFPGLYVVNRDGSSLRQIYTGTAFSTAWDPKRQGVVYAGVGPTFASEETKVDVISINVDDDD--STYKRLTKGGKNNAFPSPSPDGKWVVFRSGRSGHKNLYIMDALDGEEAGLHRLTEGPWTDTMCNWSPNGDWIAFASDRENPGSGSYELFMVHPNGTGLKKVVQSGSGGRTNHPWFSPDGKNIVFTTDYAAVSAEPISNPHHYQPYGDIFTIRLDGSGIRRLTHNSFEDGTPAWGPTFMRPIDVEHPNDGPHCSFEDCHWL------SKFPNHGVEGAPSVSIKVQCG 698
BLAST of DCAR_024514 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4A7I0 ((uncharacterized protein LOC107794569 {ECO:0000313|RefSeq:XP_016472549.1}))
HSP 1 Score: 874.389 bits (2258), Expect = 0.000e+0
Identity = 422/646 (65.33%), Postives = 512/646 (79.26%), Query Frame = 0
Match: A0A1S4A7I0 ((uncharacterized protein LOC107794569 {ECO:0000313|RefSeq:XP_016472549.1}))
HSP 1 Score: 874.389 bits (2258), Expect = 0.000e+0
Identity = 422/646 (65.33%), Postives = 512/646 (79.26%), Query Frame = 0
Query: 2 YSFDIYSVPLDSKNSAPLSELRLTDGHSLNFNGQFVTS-----TNIIREQQQQQQQRAIELVYATERGGVSTIYQDIIFNPTPQGLRREALEVSAQ----RVEL-LSGDGVSMKDRPSLVGDSLIYVSTHENPGVPRASWAAVYSTQLSTGLTRRLSPYGVADFSPAVSPSGVWTAVASLGDKGWNGEVEELGTDVFVFSTRDGSNRVKVVEHGGWPSWADEFTLYFHRRGDDGWWSIYKAILPKNGELSVDSVLTQRVTPPGVHSFTPAACG-NESLVAVATRRSGSDYRHIEIFDLKAKKYRELTRPITPDAHHFSPFCSADSKMVGYHKCRGSSRGMKSEKPLFLENLRSPMPEISLFRVDGSFPSFSPDGNRVAFVDFPGLYVANMDGSGRRQVLSDMAFATAWDPKRKGVVYTSTGPTFETESTEVDIVSVNVDDNDLESSYKKLTHGGANNAFPWPSPDGKWVVFRSGRSGHKNLYIMDAVEGETGGLHRLTEGPWSDTMCNWSPDGEWIAFASDREIVGSGGFELYLIHPNGTGLRKLVQSGSVGRTNHPYFSPDSKKIAFTSDYGAVSAEPISNPHQYQPYGDIYTINVDGSGLKRLTHNSYEDGTPAWGPNYIQPVDVESAYNAAQCAFEDLSWLQI 636
Y+FDI+++P + + EL+LTDG+S+NFNG F + + + + L+Y TER G I+ D++F+ TP RR LE + RV++ L G VS+KD+PSLVG+SLIYVSTHE+PGVPR SWAAVYSTQL++G TRRL+P GVADFSPAVSPSGVWTAVAS G KGW GEV+EL TD++VF TRDGS RVKVVEHGGWP+WAD+FTLYFHR+ DDGWWS++KA+LPK G+L V+SV T RVTPPG+H+FTPAA N++L+AVATRR+GS+YRHIE+FD+ K + E+TRP++ AHH +PF + DS VGYHKCRG+ G S+ L LE+L++P+P ISLFRVDGSFPSFSP G+R+A+V PGLYV N DGSG RQV + MAF+TAWDPKRKGVVYTS GPTF +E TEVD++S+NVDD DL SYK+LT GG NNAFP PSPDGKW+VFRSGRSGHKNLY+MDA+EGE GGL+RLTEG W+DTMCNWSPDG+WIAFASDRE GSG FE++++HPNGTGLRK++QSG GRTNHPYFSPD K I FTSDY AVSAEPISNPH YQPYGDI+ I DGS ++RLTHNSYEDGTPAWG ++PVDVE + C+FED WL +
Sbjct: 50 YAFDIFALP-TTHSPIQSKELQLTDGNSVNFNGYFPATLPPSLVSCLPNHSLNNETPPFHLIYVTERNGTHHIFYDVVFHGTP---RRAILEFPTRTEWTRVQVPLVGAHVSLKDKPSLVGESLIYVSTHEDPGVPRTSWAAVYSTQLNSGSTRRLTPKGVADFSPAVSPSGVWTAVASYGKKGWAGEVQELDTDIYVFLTRDGSGRVKVVEHGGWPAWADDFTLYFHRKCDDGWWSVFKAVLPKAGQLGVESVSTHRVTPPGLHAFTPAASTVNKNLIAVATRRAGSEYRHIELFDVVLKNFTEITRPVSTHAHHLNPFFAPDSSWVGYHKCRGTGNGRGSDT-LLLEHLKNPIPGISLFRVDGSFPSFSPSGDRIAYVKLPGLYVVNYDGSGLRQVSTRMAFSTAWDPKRKGVVYTSVGPTFASEKTEVDVISINVDDKDL--SYKQLTTGGQNNAFPSPSPDGKWIVFRSGRSGHKNLYVMDALEGEAGGLYRLTEGSWTDTMCNWSPDGDWIAFASDRENPGSGSFEMFMVHPNGTGLRKVIQSGMGGRTNHPYFSPDGKYIVFTSDYAAVSAEPISNPHHYQPYGDIFVIKSDGSEIRRLTHNSYEDGTPAWGTTLMKPVDVEWPNGGSPCSFEDCHWLNV 688
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7BD34 | E-Value: 0.000e+0, PID: 65.63 | (Uncharacterized protein {ECO:0000313|EMBL:MPA6612... [more] |
| A0A5J5BXH6 | E-Value: 0.000e+0, PID: 64.99 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8546... [more] |
| A0A1J6IEC7 | E-Value: 0.000e+0, PID: 64.63 | (Uncharacterized protein {ECO:0000313|EMBL:OIT0325... [more] |
| A0A1S3Z6Q6 | E-Value: 0.000e+0, PID: 64.53 | (uncharacterized protein LOC107783614 {ECO:0000313... [more] |
| A0A1U7XWJ4 | E-Value: 0.000e+0, PID: 64.38 | (uncharacterized protein LOC104242978 {ECO:0000313... [more] |
| M1A642 | E-Value: 0.000e+0, PID: 64.45 | (Uncharacterized protein {ECO:0000313|EnsemblPlant... [more] |
| A0A4S4E278 | E-Value: 0.000e+0, PID: 63.61 | (Uncharacterized protein {ECO:0000313|EMBL:THG0995... [more] |
| A0A4S4E2V0 | E-Value: 0.000e+0, PID: 64.39 | (Uncharacterized protein {ECO:0000313|EMBL:THG1019... [more] |
| A0A2R6Q154 | E-Value: 0.000e+0, PID: 64.02 | (Protein TolB like {ECO:0000313|EMBL:PSS00130.1})[more] |
| A0A1S4A7I0 | E-Value: 0.000e+0, PID: 65.33 | (uncharacterized protein LOC107794569 {ECO:0000313... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |