Resource Type:
Polypeptide
Name:
DCAR_014389
Identifier:
DCAR_014389.mRNA-protein
Sequence:
MHLQETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVG
AKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNH
LDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQN
QVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERD
LSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASS
LSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAE
LDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESES
VSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENM
LRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKET
ETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQ
NISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKL
AECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWK
LHSNESFLPKRDPSSELSAETPTPLVNGYNKESPVSASSSSSSDASLNHI
SSGKSKSGFGKLFSRSKSGVQLGNHQGLN*
Sequence Length:
680
Sequence Checksum:
6415ca17c94103f107ba577a7c3331a4
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_014389, derives from mRNA, DCAR_014389. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_014389 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_014389 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6L5BDS5 ((Uncharacterized protein {ECO:0000313|EMBL:KAF1002862.1}))
HSP 1 Score: 1081.24 bits (2795), Expect = 0.000e+0
Identity = 559/677 (82.57%), Postives = 606/677 (89.51%), Query Frame = 0
Match: A0A6L5BDS5 ((Uncharacterized protein {ECO:0000313|EMBL:KAF1002862.1}))
HSP 1 Score: 1081.24 bits (2795), Expect = 0.000e+0
Identity = 559/677 (82.57%), Postives = 606/677 (89.51%), Query Frame = 0
Query: 4 QETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPSSELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQLGN-HQGLN 679
QETLKEYSNLFSQSPEVT+K V NGEVNDGIKILTEKLSAALVNVGAKEDLVKQHA VAEEAIAGWEKAENEV ++KQQLEAAVQQNLGLEVRVNHLD ALKECVRQLRQAKEEQ+QRIH+AL EKSNEW+TTR +LESELL+LQNQV+EV+D P+ ID G KL+S+EKENA LK EL LSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQ GVRKSL+VN KSPAASSLSVESLADSQSDNGERIK LD D Y+ GID GDK CSDSWASALIAELDHFKAEKTS+KNLTS S DIDIMDDFLEMERLAALPE E KTC++ESESVSCQTN+TESSLRDEVKT QR+AELE L QIEAEKESI CRANETE MLR +LDT+TQRVAVLEDKLEKIEAEK+EL +LIAS +SV+ SKAQL ETETRLEQLQKELN MNES++LLEYQLVGME EI TM+KEVDTL LD++KE+N+SA+MV+KC++LE EL R+++E ELHQ KSSD D+KL QEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDT NVPRLRRGES+VPPAVGAEPWKLHSNE+FLP+RDP SELS E PTP++NG KES SASSSSSSDASLNH SSGKSK+GFGK FSRSKSGVQL N HQG N
Sbjct: 37 QETLKEYSNLFSQSPEVTTKFAVPNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHANVAEEAIAGWEKAENEVLVIKQQLEAAVQQNLGLEVRVNHLDSALKECVRQLRQAKEEQDQRIHDALAEKSNEWDTTRNKLESELLKLQNQVREVEDKDPVRIDTGAHLKLKSLEKENAALKLELVYLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQVGVRKSLLVNVHKSPAASSLSVESLADSQSDNGERIKALDVDEYKIRGIDATVGDKSCSDSWASALIAELDHFKAEKTSSKNLTSYSLDIDIMDDFLEMERLAALPEAEDKTCDIESESVSCQTNNTESSLRDEVKTRNQRLAELEEKLQQIEAEKESIVCRANETEIMLRVKLDTVTQRVAVLEDKLEKIEAEKAELANALIASNDSVEHSKAQLTETETRLEQLQKELNMMNESRDLLEYQLVGMEAEICTMTKEVDTLQLDIEKERNLSADMVVKCQELEHELIRKSREAELHQEKSSDGDLKLKQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTQNVPRLRRGESAVPPAVGAEPWKLHSNETFLPRRDPGSELSGEIPTPVMNGNTKESSASASSSSSSDASLNHSSSGKSKNGFGKFFSRSKSGVQLENYHQGQN 713
BLAST of DCAR_014389 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BWN1 ((Putative Filament-like plant protein isoform 1 {ECO:0000313|EMBL:MPA72997.1}))
HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0
Identity = 406/675 (60.15%), Postives = 498/675 (73.78%), Query Frame = 0
Match: A0A5B7BWN1 ((Putative Filament-like plant protein isoform 1 {ECO:0000313|EMBL:MPA72997.1}))
HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0
Identity = 406/675 (60.15%), Postives = 498/675 (73.78%), Query Frame = 0
Query: 4 QETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPS-SELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQLGNHQG 677
QE LK N +QSPEVTSK V++ EVND +K LTEKLSAALVNV AK+DLVKQH KVAEEA+AGWEKAENE+++L+QQLEAAVQ+NL LE RV+HLDGALKECVRQLRQA+EEQEQRIHEA+ EK+ +WE+T+ ELES+LLELQ Q + K P +D + KLES+EKEN+ LK EL S SEELEIRTIERDLSTQAAE ASKQ LESIKKVAKLEAECRRLQA RKS M+N+ S AASS+ V+ L DSQS++ ER+ ++ + + S + N + CSDSWASALIAELD F+ K NKNLT+CS +IDIMDDFLEMERLAALPE ++K VESE+V+CQ+ + E+ LR E+ D M RVA LE+KLEKIEAEK+EL +L AS +S++ S+ +L E LQ+EL A+NESKELLE+QL+GMEVE RTMS +VD+L +V+KEQ++SAEM +KC++LE+ELTR+TQEVELHQ SS+ ++K+ QEDLVVAA KLAECQKTIASLGRQLKSLATLEDFL DTP++P S + P E WKLHSNE+F+PK D S++ E P +NG + ESP S+SSS+ S LNH++S KS++GFGKLFSRSKS +Q+ N QG
Sbjct: 37 QEALKASPNHHTQSPEVTSKAVVTSEEVNDRVKGLTEKLSAALVNVSAKDDLVKQHVKVAEEAVAGWEKAENELAVLEQQLEAAVQKNLALEDRVSHLDGALKECVRQLRQAREEQEQRIHEAVVEKTRDWESTKLELESQLLELQTQAEAAKTESPASVDHDLHIKLESLEKENSTLKLELLSQSEELEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLQAMARKSSMLNDHNSVAASSVYVDYLTDSQSNSSERLNAVETNTQKVSRLGLNECEPSCSDSWASALIAELDQFRNGKAINKNLTACSVEIDIMDDFLEMERLAALPEFKNKNHCVESEAVACQSTNGENPLRAEL---------------------------------------DAMIHRVAELEEKLEKIEAEKAELENALTASQDSLETSQVKLVE-------LQRELIAVNESKELLEFQLIGMEVEARTMSAKVDSLKAEVEKEQSLSAEMAVKCQELEEELTRKTQEVELHQTASSNGELKIKQEDLVVAAGKLAECQKTIASLGRQLKSLATLEDFLIDTPSIPCFSGDGSLIHPRTSGELWKLHSNETFMPKSDSDPSKIPGENSGPSMNGNDGESPASSSSSTPSAMLLNHVTSAKSRNGFGKLFSRSKSTIQIENQQG 665
BLAST of DCAR_014389 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1ACV0 ((filament-like plant protein {ECO:0000313|RefSeq:XP_021284782.1, ECO:0000313|RefSeq:XP_021284783.1}))
HSP 1 Score: 685.256 bits (1767), Expect = 0.000e+0
Identity = 387/716 (54.05%), Postives = 491/716 (68.58%), Query Frame = 0
Match: A0A6J1ACV0 ((filament-like plant protein {ECO:0000313|RefSeq:XP_021284782.1, ECO:0000313|RefSeq:XP_021284783.1}))
HSP 1 Score: 685.256 bits (1767), Expect = 0.000e+0
Identity = 387/716 (54.05%), Postives = 491/716 (68.58%), Query Frame = 0
Query: 4 QETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMN----------------------------------------------ESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPSS-ELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQL 672
QE K N +QSPEV+SK + + +VND IK LTEKLSAALVNV AKEDLVKQHAKVAEEAIAGWEKAENEV +LKQ+LEAAVQQN LE RV+HLDGALKECVRQLRQA+EEQEQ+I+EA+ + + +WETT++ELES+LLELQ++ + VK P P + HK+E++EKEN+ LK EL S SEE EIRTIERDLSTQAAE ASKQ LESIKKVAKLEAECRRL+A KS +VN+ KSP ASS+ VESL DSQSD+GER+ ++ D ++ SG++ N G+ CSDSWASALIA LD FK EK N+NL S S +ID+MDDFLEMERLAALPE +S+ VES++ + Q++D +SSL+ E++ R AELE L EKIE EK+EL +L S ES++ S QL++TET+LE+L++E + N ESK+LLE QL+ +E E RTMS ++D+L +V+KE+ +SA++ +KC++LE+EL+R+ QE EL Q +S+ +VK+ QEDL VAA KLAECQKTIASLG+QLKSLATLEDFL DT ++P RG S +P A G EPWKLHSNE++ PKRDP S ++A+ P VN + +P +SSSSSS S NH SS K+++GF K F+RSK+G+QL
Sbjct: 37 QEAFKASPNNNAQSPEVSSKASANCEDVNDSIKSLTEKLSAALVNVSAKEDLVKQHAKVAEEAIAGWEKAENEVVLLKQKLEAAVQQNSALEDRVSHLDGALKECVRQLRQAREEQEQKINEAVAKTTRDWETTKFELESQLLELQDKAEAVKSEPPPHFSPDLWHKIEALEKENSALKLELSSQSEEFEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLKARACKSSLVNDHKSPVASSIYVESLTDSQSDSGERLNVVEIDTHKMSGLEANKGEPSCSDSWASALIAGLDQFKNEKVINRNLASSSIEIDLMDDFLEMERLAALPEIKSENQCVESKATAKQSSDADSSLKAELEAMIHRTAELEQKL---------------------------------------EKIELEKAELEIALAKSQESLEASALQLRDTETKLEELEREFHMANEAKQHLEFQLSSMETDAETMSAKIDSLEAKIEKERALSAEVSVNATESKQLLESQLISIEAEARTMSAKIDSLETEVEKERALSAQITVKCQELEEELSRKRQEAELQQTANSNVEVKIKQEDLAVAAGKLAECQKTIASLGQQLKSLATLEDFLIDTTSIPEFSRGGSLIPKA-GGEPWKLHSNETYSPKRDPDSPRVNADHSGPSVNKNDGNTP-PSSSSSSSIVSSNHASSEKNRNGFAKFFTRSKNGIQL 711
BLAST of DCAR_014389 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BB76 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8538461.1}))
HSP 1 Score: 681.789 bits (1758), Expect = 0.000e+0
Identity = 403/716 (56.28%), Postives = 485/716 (67.74%), Query Frame = 0
Match: A0A5J5BB76 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8538461.1}))
HSP 1 Score: 681.789 bits (1758), Expect = 0.000e+0
Identity = 403/716 (56.28%), Postives = 485/716 (67.74%), Query Frame = 0
Query: 4 QETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVK-----------------------------------------LNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPSS-ELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQLGNHQG 677
QE LK N +QSPEVTSK V+ GE+ND +K LTEKLSAALVNV AKEDLVKQHAKVAEEA+AGWEKAEN+V++LKQQLEAAVQ+NL LE RV+HLDGALKECVRQLRQA+EEQEQRIHEA+ +K+ EWE T+ ELES+LLE Q Q K P +D KLES+E EN+ LK EL S SEELEIRTIERDLSTQAAE ASKQ LESIKKVAKLEAECRRLQA RKS MVN+ KS AASS+ VE L DSQSD+ ER+ ++ D + S + N + CSD WASALIAELD F+ K N NLT+CS DIDIMDDFLEMERLAALPE ++K VE E+V+CQ+ + E+ LR ++LD M RV LE+KLEKIEAEK+EL +L S S++ S+ QL + E RL +LQ+EL A+N SKELLE+QL+G+EVE RTMS +V+ KEQ++SAEM +KC++LE+ELTR+T+EVELH+ S+ ++K L+QEDL VAA KLAECQKTIASLGRQLKSLATLEDFL DT N+P GE+ +P G E WK HSNE+F+P+ D ++ E P V G N E ++SSSSSS SLNH++S K ++GFGKLFSRSKS +QL N QG
Sbjct: 38 QEALKASPNHDTQSPEVTSKAIVTCGEINDSVKGLTEKLSAALVNVSAKEDLVKQHAKVAEEAVAGWEKAENDVAVLKQQLEAAVQKNLALEDRVSHLDGALKECVRQLRQAREEQEQRIHEAVVDKTREWEFTKLELESQLLEFQTQADAAKTESPASVDRDFHIKLESLENENSTLKLELLSQSEELEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLQAMARKSSMVNDHKSIAASSVYVEYLTDSQSDSSERLNAVETDAQKVSRSELNECEPSCSDLWASALIAELDQFRNGKAINNNLTACSVDIDIMDDFLEMERLAALPEFKNKNHCVELEAVACQSTNGENPLR---------------------------------------SKLDAMIHRVTELEEKLEKIEAEKAELENALTVSQHSLEASQVQLTDAEMRLVELQRELTAVNASKELLEFQLIGVEVEARTMSAKVE-------KEQSLSAEMAVKCQELEEELTRKTKEVELHKTSGSNGELKIKQVGFPTCIFTLHAYFSMVIVTCRWKNSQPSSSEMMVKLVLSQEDLAVAAGKLAECQKTIASLGRQLKSLATLEDFLIDTANIPGF-SGEALIPRTDG-ELWKFHSNETFIPRSDSDPLKMPRENSGPSVTG-NDEESPASSSSSSSAVSLNHVTSVKVRNGFGKLFSRSKSAIQLENQQG 704
BLAST of DCAR_014389 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061FP54 ((Filament-like plant protein, putative isoform 1 {ECO:0000313|EMBL:EOY16299.1}))
HSP 1 Score: 680.633 bits (1755), Expect = 0.000e+0
Identity = 386/716 (53.91%), Postives = 490/716 (68.44%), Query Frame = 0
Match: A0A061FP54 ((Filament-like plant protein, putative isoform 1 {ECO:0000313|EMBL:EOY16299.1}))
HSP 1 Score: 680.633 bits (1755), Expect = 0.000e+0
Identity = 386/716 (53.91%), Postives = 490/716 (68.44%), Query Frame = 0
Query: 4 QETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMN----------------------------------------------ESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPSS-ELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQL 672
QE K N +QSPEV+SK + + +VND IK LTEKLSAALVNV AKEDLVKQHAKVAEEAIAGWEKAENEV +LKQ+LEAAVQQN LE RV+HLDGALKECVRQLRQA+EEQEQ+I+EA+ + + +WETT++ELES+ LELQ++ + VK P P + HK+E++EKEN+ LK EL S SEE EIRTIERDLSTQAAE ASKQ LESIKKVAKLEAECRRL+A KS +VN+ KSPAASS+ VES+ DSQSD+GER+ ++ D ++ SG++ N G+ CSDSWASALIAELD FK EK ++NL S S +ID+MDDFLEMERLAALPE +S+ +ES++ + Q+ND +SSL+ E++ R AELE L EKIE EK+EL +L S ES++ S QL++TET+LE+L++E + N ESK+LLE QL+ +E E RTMS ++D+L +V+KE+ +SA++ +KC++LE+EL R+ QE EL Q +S+ +VK+ QEDL VAA KLAECQKTIASLG+QLKSLATLEDFL DT ++P RG S V A G EPWKLHSNE++ PKRDP S ++A+ P VN + +P +SSSSSS S NH SS K+++GF K F+RSK+G+QL
Sbjct: 37 QEAFKASPNNNAQSPEVSSKASANCEDVNDSIKRLTEKLSAALVNVSAKEDLVKQHAKVAEEAIAGWEKAENEVVLLKQKLEAAVQQNSALEDRVSHLDGALKECVRQLRQAREEQEQKINEAVAKTTRDWETTKFELESQFLELQDKAEAVKSEPPPHFSPDLWHKIEALEKENSALKLELSSQSEEFEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLKAIACKSSLVNDHKSPAASSIYVESVTDSQSDSGERLNVVEIDTHKMSGLEANKGEPSCSDSWASALIAELDQFKNEKVISRNLPSSSIEIDLMDDFLEMERLAALPEIKSENQFLESKATARQSNDGDSSLKAELEAMIHRTAELEQKL---------------------------------------EKIELEKAELEIALAKSQESLEASALQLRDTETKLEELEREFHMANEAKQHLESQLSSMETDAETMSSKIDSLKAEIEKEMALSAEISVNATESKQLLESQLISIEAEARTMSAKIDSLETEVEKERALSAQITVKCQELEEELLRKRQEAELQQTANSNVEVKIKQEDLAVAAGKLAECQKTIASLGQQLKSLATLEDFLIDTTSIPEFSRGGSLVSKA-GGEPWKLHSNETYSPKRDPDSPRVNADHSGPSVNKNDGNTP-PSSSSSSSIVSSNHASSEKNRNGFAKFFTRSKNGIQL 711
BLAST of DCAR_014389 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5C7H7I5 ((Uncharacterized protein {ECO:0000313|EMBL:TXG52988.1}))
HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0
Identity = 383/678 (56.49%), Postives = 500/678 (73.75%), Query Frame = 0
Match: A0A5C7H7I5 ((Uncharacterized protein {ECO:0000313|EMBL:TXG52988.1}))
HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0
Identity = 383/678 (56.49%), Postives = 500/678 (73.75%), Query Frame = 0
Query: 1 MHLQETLKEYSNLFSQSPEVTSKVTVSNGE-VNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRV----AVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRD-PSSELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQL 672
M QE LK N QSPEVTSK ++NGE +N+G+K LTEKLSAALVNV AKEDLVKQHAKVAEEAIAGWEKAENEV++LKQ+ EAAVQQN LE RV+HLDGALKECVRQLRQA++EQEQ+I+EA+ +K+ EWE+ + E+E++L+ L+++ + VK P+ IDP + HKLE +EKEN+ LK EL S SEELEIR IERDLSTQAAE ASKQ L+SIKKVAKLEAECRRL+ V KS + + KS ASS+ VESL DSQSD+GER+ +D D + G + N GD CSDSWASALIAELD FK EK N+N T+ S +I++MDDFLEMERLA+LP+ S + +ESE+++ ++ D ESSLR E++ R AELE L ++A+ + + ET +AEL+ +++ A LE +LEK+EAEK+EL +L S E D S QL+E +T+LE LQ ELN NESK+ +E + + MEVE TM+ ++D+L +++KE+ ++A++ +KC+ LE+EL R QE+EL Q S+++VK+ QED+ VAA KLAECQKTIASLG+QLKSLATLEDFL DT ++ G V A G EPWKLHSN +F PKRD SS ++AE+ P V+ + +P S SSS+SS S NH++S K+++GF K FSR+K+G+QL
Sbjct: 6 MFEQEALKGSPNHNEQSPEVTSK-HIANGEGINEGVKTLTEKLSAALVNVSAKEDLVKQHAKVAEEAIAGWEKAENEVAVLKQKFEAAVQQNSVLEERVSHLDGALKECVRQLRQARDEQEQKINEAVEKKTREWESMKSEMENQLVILRSKAEAVKSEPPVHIDPVLLHKLEFLEKENSALKIELMSQSEELEIRAIERDLSTQAAETASKQHLDSIKKVAKLEAECRRLKTIVYKSSSLTDHKSATASSIYVESLVDSQSDSGERLNAVDIDARKMGGSEPNKGDSNCSDSWASALIAELDQFKNEKVFNRNPTASSIEINLMDDFLEMERLASLPDSGSGS-HLESEALAKKSIDVESSLRTELEAMIHRTAELEEKLGNMDAKNAELEEKI-ETMESEKAELEQKFEKMEAEKAELEQQLEKMEAEKAELETTLSISQECSDASHHQLREAKTKLEDLQTELNLANESKQHVESRFITMEVEAHTMTAKIDSLEEEIEKERALAAQITVKCQKLEEELLRTKQEIELQQNAKSNAEVKIKQEDVAVAAGKLAECQKTIASLGKQLKSLATLEDFLIDTASIAEFNGGVLPVSKA-GTEPWKLHSNVTFSPKRDLHSSSIAAESSGPSVSKNDGNTPPSTSSSTSSAVSSNHVTSEKNRNGFAKFFSRTKNGIQL 679
BLAST of DCAR_014389 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438C4B3 ((Filament-like plant protein {ECO:0000313|EMBL:RVW17756.1}))
HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0
Identity = 391/693 (56.42%), Postives = 491/693 (70.85%), Query Frame = 0
Match: A0A438C4B3 ((Filament-like plant protein {ECO:0000313|EMBL:RVW17756.1}))
HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0
Identity = 391/693 (56.42%), Postives = 491/693 (70.85%), Query Frame = 0
Query: 7 LKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQH---------------------KLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDP-SSELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLF--SRSKSGVQLGNH 675
LK N +QSPEVTSKV S EVND +K LTEKLSAAL+NVGAK+DLVKQHAKVAEEA+AGWEKAENEV +LKQQLEAAVQ+NL LE RV+ LDGALKECVRQLRQA+EEQE++I EA+ +K+ EWE+T++ELES+LLELQ QV K P+ DP + H +L+++EKEN+ LK EL S SEELEIRTIERDLSTQAAE ASKQ LESIKKVAKLEAECRRL+A RKS +++ +S AASSL +ESL DSQSDNGE++ T+D +++TS D N + CSDSWASALIAELD FK EK ++NL + S +ID+MDDFLEMERLAALP+ E +C +ES++V+ QT++ +SSLR AELE TMT R+A LE+KLEK+EAEK+EL +L S + ++ SK QL+E E +LE++QKEL+ NESK+ LE QL+ ME E RTMS VD+L ++KKE +SAE+ +KC++LEDEL ++ QE+E QA SS+S+ K+ QE+L +AA KLAECQKTIASLG+QLKSLATLEDFLTD N+ G+S + A G E W+LHSN++FLP+R SS +SAE P +NG N S SS S S +S+NH+ S K+ GFG +RS+SG+QL NH
Sbjct: 166 LKSSPNHSTQSPEVTSKVATSGDEVNDNVKSLTEKLSAALLNVGAKDDLVKQHAKVAEEAVAGWEKAENEVVVLKQQLEAAVQENLVLEDRVSRLDGALKECVRQLRQAREEQEEKISEAVVKKTREWESTKFELESQLLELQTQVDAAKAEPPVPFDPDLCHMLQALEKQNSALKYELLSQSEELQALEKENSTLKLELLSQSEELEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLKAMARKSSSIHDHRSVAASSLHIESLTDSQSDNGEQLNTVDISLHQTSSFDVNDCEPSCSDSWASALIAELDQFKNEKVVSRNLPASSIEIDLMDDFLEMERLAALPQAEHGSCSLESQAVTNQTSNEDSSLR----------AELE-----------------------------TMTHRMAELEEKLEKMEAEKAELEIALTVSQDCIEASKIQLREAEMKLEEMQKELDFANESKQALESQLIAMEAEARTMSARVDSLEAEIKKEHAMSAEIGVKCQELEDELLKKKQELEFQQAASSNSERKVKQEELAIAAGKLAECQKTIASLGKQLKSLATLEDFLTDAGNLADF-SGKSVISTAAGGETWQLHSNDTFLPRRSADSSNMSAEICGPSINGNNGN---SFSSLSLSASSINHLGSDKTLQGFGNQLPPTRSRSGIQLQNH 815
BLAST of DCAR_014389 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EJ54 ((Uncharacterized protein {ECO:0000313|EMBL:THG16581.1}))
HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 391/676 (57.84%), Postives = 476/676 (70.41%), Query Frame = 0
Match: A0A4S4EJ54 ((Uncharacterized protein {ECO:0000313|EMBL:THG16581.1}))
HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 391/676 (57.84%), Postives = 476/676 (70.41%), Query Frame = 0
Query: 5 ETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPS-SELSAETPTPLVNGYNKE--SPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQLGNHQG 677
E LK N +QSPE SK VS E+ D +KILTEKLSAALVNV AKEDLVKQH+KVAEEA+AGWEKAENEV++LKQ+LEAA+QQNL LE RV+HLDGALKECVRQLRQ +EEQEQ+I EAL EK+ E+E+T+ ELE +LL+ Q Q K + +DP + KLES+EKENA LK +L S SEELEI TIERDLS QAAE ASKQ LESIKKV KLEAECRRLQA RKS N+QKS AASS+ VESL DSQSD GER+ L NA + C+DSWA ALI ELD FK EKT K++T S +IDIMDDFLEMERLAALPE E++T +ES + Q + E+ L+ E + RVA LE L +IEAEK+ EL K+L AS +SV+ S++QLKE E RLE+LQKEL A+NE KELLE+QL+G+EVE RTMS +V +L+ +V+KE+++SAEM +KCR+LEDELTR++QE+EL Q S+ K+ QEDL VAA KLAECQKTIASLGRQL+SLATLEDFL DT N+P RG +P A E WKLH NE+F+PK D ++ E P VNG +K+ + S+S+S+SS ASL+ ++S KS++GFGKLFSRSKSG+QL N Q
Sbjct: 85 EALKASPNHNTQSPEFISKAAVSKEEIIDSVKILTEKLSAALVNVSAKEDLVKQHSKVAEEAVAGWEKAENEVAVLKQELEAAIQQNLALEDRVSHLDGALKECVRQLRQGREEQEQKIEEALLEKTCEFESTKVELEGQLLQFQAQAVAAKSESLVSVDPDLHIKLESLEKENAALKLKLLSQSEELEISTIERDLSAQAAETASKQHLESIKKVTKLEAECRRLQAVTRKSSSANDQKSLAASSIYVESLTDSQSDTGERLNALQ-----------NACEPSCTDSWALALITELDQFKNEKTLRKSITGSSLEIDIMDDFLEMERLAALPETETRTQCLESVVDANQLSHGENPLKAEFEAMKHRVAGLEEKLEKIEAEKD---------------------------------------ELEKALTASQDSVEASQSQLKEVEMRLEELQKELTAVNELKELLEFQLIGIEVEARTMSAKVGSLNEEVEKERSLSAEMAVKCRELEDELTRKSQEIELQQTAISNGKPKIKQEDLDVAAGKLAECQKTIASLGRQLESLATLEDFLIDTANLPGFSRGRLMIPRA--GELWKLHGNETFMPKSDSDLLKMPVENSDPSVNGNDKKSPASSSSSTSTSSSASLSQVTSAKSRNGFGKLFSRSKSGIQLENQQA 708
BLAST of DCAR_014389 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6H0L3 ((Uncharacterized protein {ECO:0000313|EMBL:CCB45485.1}))
HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0
Identity = 388/696 (55.75%), Postives = 491/696 (70.55%), Query Frame = 0
Match: F6H0L3 ((Uncharacterized protein {ECO:0000313|EMBL:CCB45485.1}))
HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0
Identity = 388/696 (55.75%), Postives = 491/696 (70.55%), Query Frame = 0
Query: 4 QETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQH---------------------KLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDP-SSELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLF--SRSKSGVQLGNH 675
Q+ LK N +QSPEVTSKV S EVND +K LTEKLSAAL+NVGAK+DLVKQHAKVAEEA+AGWEKAENEV +LKQQLEAAVQ+NL LE RV+ LDGA+KECVRQLRQA+EEQE++I EA+ +K+ EWE+T++ELES+LLELQ QV K P+ DP + H +L+++EKEN+ LK EL S SEELEIRTIERDLSTQAAE ASKQ LESIKKVAKLEAECRRL+A RKS +++ +S AASSL +ESL DSQSDNGE++ +D +++TS D N + CSDSWASALIAELD FK EK ++NL + S +ID+MDDFLEMERLAALP+ E + +ES++V+ QT++ +SSLR AELE TMT R+A LE+KLEK+EAEK+EL +L S + ++ SK QL+E E +LE++QKEL+ NESK+ LE QL+ ME E RTMS VD+L ++KKE +SAE+ +KC++LEDEL ++ QE++ QA SS+S+ K+ QE+L +AA KLAECQKTIASLG+QLKSLATLEDFLTD N+ G+S + A G E W+LHSN++FLP+R SS +SAE P +NG N S SS S S +S+NH+ S K+ GFG +RS+SG+QL NH
Sbjct: 37 QDGLKSSPNHSTQSPEVTSKVATSGDEVNDNVKSLTEKLSAALLNVGAKDDLVKQHAKVAEEAVAGWEKAENEVVVLKQQLEAAVQENLVLEDRVSRLDGAIKECVRQLRQAREEQEEKISEAVVKKTREWESTKFELESQLLELQTQVDAAKAEPPVPFDPDLCHMLQALEKQNSALKYELLSQSEELQALEKENSTLKLELLSQSEELEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLKAMARKSSSIHDHRSVAASSLHIESLTDSQSDNGEQLNMVDISLHQTSSFDVNDCEPSCSDSWASALIAELDQFKNEKVVSRNLPASSIEIDLMDDFLEMERLAALPQAEHGSRSLESQAVTNQTSNEDSSLR----------AELE-----------------------------TMTHRMAELEEKLEKMEAEKAELEIALTVSQDCIEASKIQLREAEMKLEEMQKELDFANESKQALESQLIAMEAEARTMSARVDSLEAEIKKEHAMSAEIGVKCQELEDELLKKKQELKFQQAASSNSERKVKQEELAIAAGKLAECQKTIASLGKQLKSLATLEDFLTDAGNLADF-SGKSVISTAAGGETWQLHSNDTFLPRRSADSSNMSAEICGPSINGNNGN---SFSSLSLSASSINHLGSDKTLQGFGNQLPPTRSRSGIQLQNH 689
BLAST of DCAR_014389 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RP69 ((Filament-like plant protein {ECO:0000313|EMBL:PSS31811.1}))
HSP 1 Score: 655.21 bits (1689), Expect = 0.000e+0
Identity = 378/673 (56.17%), Postives = 461/673 (68.50%), Query Frame = 0
Match: A0A2R6RP69 ((Filament-like plant protein {ECO:0000313|EMBL:PSS31811.1}))
HSP 1 Score: 655.21 bits (1689), Expect = 0.000e+0
Identity = 378/673 (56.17%), Postives = 461/673 (68.50%), Query Frame = 0
Query: 4 QETLKEYSNLFSQSPEVTSKVTVSNGEVNDGIKILTEKLSAALVNVGAKEDLVKQHAKVAEEAIAGWEKAENEVSILKQQLEAAVQQNLGLEVRVNHLDGALKECVRQLRQAKEEQEQRIHEALTEKSNEWETTRYELESELLELQNQVQEVKDNGPICIDPGVQHKLESIEKENAFLKSELESLSEELEIRTIERDLSTQAAEMASKQQLESIKKVAKLEAECRRLQAGVRKSLMVNEQKSPAASSLSVESLADSQSDNGERIKTLDADVYRTSGIDTNAGDKGCSDSWASALIAELDHFKAEKTSNKNLTSCSPDIDIMDDFLEMERLAALPEPESKTCEVESESVSCQTNDTESSLRDEVKTTYQRVAELENNLLQIEAEKESIACRANETENMLRAELDTMTQRVAVLEDKLEKIEAEKSELVKSLIASTESVDLSKAQLKETETRLEQLQKELNAMNESKELLEYQLVGMEVEIRTMSKEVDTLHLDVKKEQNISAEMVLKCRDLEDELTRRTQEVELHQAKSSDSDVKLNQEDLVVAADKLAECQKTIASLGRQLKSLATLEDFLTDTPNVPRLRRGESSVPPAVGAEPWKLHSNESFLPKRDPSSELSAETPTPLVNGYNKESPVSASSSSSSDASLNHISSGKSKSGFGKLFSRSKSGVQLGNHQ 676
QE LK N +QSPEVTSK V+ E++D +KILTEKLSAALVNV AKEDLVK HAKVAEEA+AGWEKAEN+V++LKQQ EAA+QQ L LE RV+HLDGALKECVRQLRQ +EEQEQ+IHEA+ EK+ EWE+T EL+ +L + Q Q++ VK P IDP + K ES+EKEN+ LK EL S SEELEIRTIERDLS QAAE ASKQ LESIKKVAKLEAECRRLQA RKS N QKS +ASS VE+L D QSD+GER+ L+ D S + F++EK +T S +IDIMDDFLEMERLAALPE E+K+ E S + Q + E+ L+ E++ RVAELE+ L++IE AEK EL K+L A +S + S+ QLK+TE RLE+L+KELNA+NESKEL E+QL+GMEVE RTM+ +V++L ++V+KE +SAEM +KC++LE+ELTR++QE+EL Q S+ K+NQEDL VAA KLAECQKTIASLGRQL+SLATLEDFLTDT N+P L G S +P A +PWKLHSNE+FLPK S LV G N E + SSSS SLNHISS KS++GFGKLFSRSK+G+Q+ N Q
Sbjct: 37 QEALKASPNHNTQSPEVTSKTAVNGEEISDSVKILTEKLSAALVNVSAKEDLVKLHAKVAEEAVAGWEKAENDVAVLKQQFEAAIQQKLALEDRVSHLDGALKECVRQLRQGREEQEQKIHEAVVEKTREWESTNVELQRQLFQFQTQLEAVKAEPPTSIDPDLPIKFESLEKENSALKFELLSRSEELEIRTIERDLSAQAAETASKQHLESIKKVAKLEAECRRLQAVARKSSFANGQKSLSASSFYVETLTDCQSDSGERLNALEIDSQNMSRL-----------------------FESEKAITNGITGSSLEIDIMDDFLEMERLAALPEIETKSQCPELVSDANQVVNGENLLKAELEEMSHRVAELEDKLMKIE---------------------------------------AEKGELEKALAAREDSFEASQDQLKQTEMRLEELRKELNAVNESKELFEFQLIGMEVEARTMASKVESLKVEVEKEHRLSAEMAVKCQELENELTRKSQEIELQQTAVSNGKPKINQEDLDVAAVKLAECQKTIASLGRQLQSLATLEDFLTDTANLPGLSGGGSMIPGA--GDPWKLHSNETFLPKNSSS----------LVIG-NAE---KSPPSSSSSVSLNHISSAKSRNGFGKLFSRSKNGIQVENQQ 631
| Match Name | Stats | Description |
|---|---|---|
| A0A6L5BDS5 | E-Value: 0.000e+0, PID: 82.57 | (Uncharacterized protein {ECO:0000313|EMBL:KAF1002... [more] |
| A0A5B7BWN1 | E-Value: 0.000e+0, PID: 60.15 | (Putative Filament-like plant protein isoform 1 {E... [more] |
| A0A6J1ACV0 | E-Value: 0.000e+0, PID: 54.05 | (filament-like plant protein {ECO:0000313|RefSeq:X... [more] |
| A0A5J5BB76 | E-Value: 0.000e+0, PID: 56.28 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8538... [more] |
| A0A061FP54 | E-Value: 0.000e+0, PID: 53.91 | (Filament-like plant protein, putative isoform 1 {... [more] |
| A0A5C7H7I5 | E-Value: 0.000e+0, PID: 56.49 | (Uncharacterized protein {ECO:0000313|EMBL:TXG5298... [more] |
| A0A438C4B3 | E-Value: 0.000e+0, PID: 56.42 | (Filament-like plant protein {ECO:0000313|EMBL:RVW... [more] |
| A0A4S4EJ54 | E-Value: 0.000e+0, PID: 57.84 | (Uncharacterized protein {ECO:0000313|EMBL:THG1658... [more] |
| F6H0L3 | E-Value: 0.000e+0, PID: 55.75 | (Uncharacterized protein {ECO:0000313|EMBL:CCB4548... [more] |
| A0A2R6RP69 | E-Value: 0.000e+0, PID: 56.17 | (Filament-like plant protein {ECO:0000313|EMBL:PSS... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |