DCAR_006741

Resource Type: 
Polypeptide
Name: 
DCAR_006741
Identifier: 
DCAR_006741.mRNA-protein
Sequence: 
MDLEFEKICVVDGSPNTVLLCPRQFYKVEREKTNKPHDALSPKQGFSDIR
FRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEVTMKDLGDVGDRRK
IEFPQGSVNALSIGVVNSLCDSDEDSSSVEHRSSAMSLNSESSTSVTSTS
VTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERK
EVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLES
NCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHIPIAKVSIKRNK
RLHRSLLPDFSKTSWNTCESQIVKEYSKPPLPCSPAHLHGHLKFKNRHGM
PYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKES
NKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKK
DSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGHSPW
EPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQ
RTNCLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMG
CPLVTFDNSNRCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYE
VDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDED
IKYIFENVQDEKKKAPASFVLNPPFSPIARGFKKVDPDRWEFANEWFLRG
QTQILKNIARKRHGKSGLNKDDDDEEDEDLVTEIARLKLEQKELDLEVEG
MTKRLEATERRPQQMMAFLYKVVEDPEIISRMMLDKDRTRRIGEKKRRLM
TVSSSSNSSHSSLEMMATTSFKSEEEVTVGSLSSEGNFDGHCSSSETKVP
AWLMSQTGRVMETQAVVAQGGYDGGGYSVVCPHVDGGGGGDDMSFFAGNS
SPLPYPFSLLGGEF*
Sequence Length: 
965
Sequence Checksum: 
c4eac7e13f4b1aff5afa446d554fed66
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, DCAR_006741, derives from mRNA, DCAR_006741.
Loading content
Blast Results: 
The following BLAST results are available for this feature:
BLAST of DCAR_006741 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_006741 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EY59 ((Uncharacterized protein {ECO:0000313|EMBL:THG21998.1}))

HSP 1 Score: 560.451 bits (1443), Expect = 0.000e+0
Identity = 346/762 (45.41%), Postives = 469/762 (61.55%), Query Frame = 0
 
Query:    1 MDLEFEKICVVDGSPNTVLLCPRQFYKVER-----EKTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV-TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEH-RSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEH---IPIAKVSI--KRNKRLHRSLLPDFSKTSWN-TCESQI-VKEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGH------SPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRTNCL----SQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENVQDEKKK-------APASFVLNPPFSPIAR 730
            M+LEF+K C V GSP TVL  PR+  ++E+     + T   +D  S ++GF +I FRRY  +SCK + S+S   EGN+VL+RGSVYQ+S+EV  M+ +  +  RRKIE      +A S+G+V+SLC S+++SS +E  RSS +S+NS+SST       TS P    E F           VS + FL++       ++ SA+  ER+++       DP      D    + RDT   + KSLSA+  LP +  + ES+ S P +  +  SP ++  +P  + KSQRSPLGS       +P A+++   + N  L +SLL +FS T  +    SQ   K++    + CSPAHLHG LK +N+HG+P+FEF +K PED  +A+TWK  NALNW+YTFH  +  +      WG+K+SNKES+MVGQMQVSC L ++L DAG+ ENS VTEFVLYD+   R+ +AA+ +   S +  KP      +  GGT KL   SD  K   Q K+  + GH       PW   DLHP+ EIAA+VIQVP  KRESLK K  ++KS+Q + NL D   +++R   +    S TKVNVVT SGNH LP++E  GPS LLDRW+ GGGCDCGGWDM CPL  F + N +  ED+  + NQ+P +L++QG KE +PA  MT  +EG Y VDFHAQLSTLQAFSICV+ILHSTEA+ A    RD +  QC+SL   ++E++K + E V  E+K+        P SF LNPPFSPIAR
Sbjct:    5 MELEFDKYCKVGGSPKTVLPSPRRSSRIEKRIVKGKLTCTTNDLFSLEEGFKEINFRRYRSSSCKFNPSRSPGLEGNEVLRRGSVYQNSKEVRKMRKIVAMEGRRKIE--SSGSHAFSMGIVDSLCSSEKNSSLMERKRSSVVSINSDSST-------TSIPMPLIEEFLDLSHHGTDNVVSSDGFLEMPSNLNGKEDHSAENMERQKMCDPKFRCDPDVGPINDGIDFRDRDTALALHKSLSAKLALPLSPSQSESDGSKPSSPKTRFSPIKKMFDPFTKSKSQRSPLGSSASEPGGLPPARLATVGRNNNTLRKSLLNEFSNTMQSPEFGSQFGKKDHCNSAVSCSPAHLHGCLKLENKHGVPFFEFSLKYPEDVFMARTWKADNALNWVYTFHNRRKSNNG----WGLKDSNKESSMVGQMQVSCYLCTELKDAGSFENSMVTEFVLYDVAHGRRSVAARGNPNQSSDVVKPPKVSSQSSVGGTSKLDNVSDQSKLKLQLKHSTDNGHFDKLTPHPWALEDLHPSLEIAAVVIQVPFAKRESLKHKGGDEKSDQPHPNLLDLSAMEERKKGIGDGSSTTKVNVVTPSGNHSLPSSESRGPSPLLDRWRLGGGCDCGGWDMACPLTVFGSPNIQSGEDYLLVENQRPLELFVQGAKENTPALTMTVIEEGRYSVDFHAQLSTLQAFSICVAILHSTEASIAVGHERDKQLLQCNSLRVFIEEEVKDLIEAVTGEEKRKVGKMEEIPPSFKLNPPFSPIAR 753    
BLAST of DCAR_006741 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6HUC6 ((Uncharacterized protein {ECO:0000313|EMBL:CCB58349.1}))

HSP 1 Score: 543.117 bits (1398), Expect = 2.029e-178
Identity = 337/765 (44.05%), Postives = 467/765 (61.05%), Query Frame = 0
 
Query:    1 MDLEFEKICVVDGSPNTVLLCPRQFYKV----EREKTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV-TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEH-RSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCS--TPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHIPIAK--VSIKRNKRLHRSLLPDFSKTSWNT-CESQIVK-EYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSD----LRKYSDQPKNV--FNGG-HSPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRTN---CLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-----RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENV-QDEKKKAPA-------SFVLNPPFSPIAR 730
            M+L+FEK C +  SP TVL   +++  +     +EK  +  + LS ++ F++I F  +   SCK  + +    EGN  LKRGS+YQSS+EV   K +G V  RRKIE  + S ++    +V+SLC SDE+   +E  RS   SLNS+      + S   KPC+      SS    L R  S + F +I L  ++ +N SA+ AER  +  S    D       D + L +R+T   + KSLSA+  LP++  + ES+ S  +P   F+   P R+  +P  + KSQRSPL SV +   + K   S + NK   +SLL DF+ T+ +    SQ  K E+    +PCSPAHLHGHLK + +HG+P+FEF +K PED ++AKTWKV NA NW+YTFH+ +N+ ++ +  WG+K+SNKE++MVGQMQVSC L S+L D G   NS VTEFVLYDI  ARK I A+++S  S +AA+P       LAG + +L + SD    L+  ++   N   F+     PW PA+LHP+ EIAAIVIQVP EKRESLK +R  + SN+ + +  D   ++Q+      +S  KV VVT+SGNHGLP+ +  GPS LLDRW+ GGGCDCGGWDM CPL+ FDN +      CP   SP    QP +L++QG KE+ PA  +T  +EG+Y VDFHAQLSTLQAFSICV++LHS+EA       ++     C+SL  L++E++K++ E V ++EK+K P         FV NPPFSPIAR
Sbjct:    1 MELDFEKYCSLGLSPRTVLPSNQRYLGIGKRNTKEKPARRSNLLSIEEDFAEISFGDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEEVRKKKKMGAVEGRRKIELSRSSDSSFPFRIVDSLCSSDEEDPVLEEKRSPVKSLNSD-----LNASSVRKPCSQVFSLPSSPGHFLTRGGSSDGFSEIGLNLDNRENHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSPSQSESDYSRTSPKARFN---PIRKMFDPFTKSKSQRSPLHSVVKPGGVTKGPASGRNNKTFRKSLLHDFANTTQHVELASQFAKKEFHHYAVPCSPAHLHGHLKLETKHGVPFFEFSLKHPEDVLVAKTWKVNNAFNWVYTFHSIRNRKKSNASGWGLKDSNKETSMVGQMQVSCYLCSELQDGGKFGNSMVTEFVLYDIAHARKSITARENSCHSPQAAEPAKGSNEGLAGQSLELDDVSDDAVKLKCQTNHASNHDDFDAAVPYPWAPANLHPDLEIAAIVIQVPFEKRESLKYRRGEKFSNKVHSDFLDLSMVEQKKKDVLDMSPAKVKVVTASGNHGLPSGDSRGPSSLLDRWRLGGGCDCGGWDMACPLIVFDNPSILRVEDCPLMESP----QPLELFVQGAKERVPALTITRVEEGQYAVDFHAQLSTLQAFSICVAMLHSSEAFSTTGDEKNRHLLHCNSLKMLIEEEVKFLIEAVTEEEKRKVPKLVEGTLPPFVFNPPFSPIAR 753    
BLAST of DCAR_006741 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438JJU5 ((Uncharacterized protein {ECO:0000313|EMBL:RVX09207.1}))

HSP 1 Score: 542.732 bits (1397), Expect = 3.071e-178
Identity = 337/765 (44.05%), Postives = 467/765 (61.05%), Query Frame = 0
 
Query:    1 MDLEFEKICVVDGSPNTVLLCPRQFYKV----EREKTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV-TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEH-RSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCS--TPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHIPIAK--VSIKRNKRLHRSLLPDFSKTSWNT-CESQIVK-EYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSD----LRKYSDQPKNV--FNGG-HSPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRTN---CLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-----RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENV-QDEKKKAPA-------SFVLNPPFSPIAR 730
            M+L+FEK C +  SP TVL   +++  +     +EK  +  + LS ++ F++I F  +   SCK  + +    EGN  LKRGS+YQSS+EV   K +G V  RRKIE  + S ++    +V+SLC SDE+   +E  RS   SLNS+      + S   KPC+      SS    L R  S + F +I L  ++ +N SA+ AER  +  S    D       D + L +R+T   + KSLSA+  LP++  + ES+ S  +P   F+   P R+  +P  + KSQRSPL SV +   + K   S + NK   +SLL DF+ T+ +    SQ  K E+    +PCSPAHLHGHLK + +HG+P+FEF +K PED ++AKTWKV NA NW+YTFH+ +N+ ++ +  WG+K+SNKE++MVGQMQVSC L S+L D G   NS VTEFVLYDI  ARK I A+++S  S +AA+P       LAG + +L + SD    L+  ++   N   F+     PW PA+LHP+ EIAAIVIQVP EKRESLK +R  + SN+ + +  D   ++Q+      +S  KV VVT+SGNHGLP+ +  GPS LLDRW+ GGGCDCGGWDM CPL+ FDN +      CP   SP    QP +L++QG KE+ PA  +T  +EG+Y VDFHAQLSTLQAFSICV++LHS+EA       ++     C+SL  L++E++K++ E V ++EK+K P         FV NPPFSPIAR
Sbjct:    5 MELDFEKYCSLGLSPRTVLPSNQRYLGIGKRNTKEKPARRSNLLSIEEDFAEISFGDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEEVRKKKKMGAVEGRRKIELSRSSDSSFPFRIVDSLCSSDEEDPVLEEKRSPVKSLNSD-----LNASSVRKPCSQVFSLPSSPGHFLTRGGSSDGFSEIGLNLDNRENHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSPSQSESDYSRTSPKARFN---PIRKMFDPFTKSKSQRSPLHSVVKPGGVTKGPASGRNNKTFRKSLLHDFANTTQHVELASQFAKKEFHHYAVPCSPAHLHGHLKLETKHGVPFFEFSLKHPEDVLVAKTWKVNNAFNWVYTFHSIRNRKKSNASGWGLKDSNKETSMVGQMQVSCYLCSELQDGGKFGNSMVTEFVLYDIAHARKSITARENSCHSPQAAEPAKGSNEGLAGQSLELDDVSDDAVKLKCQTNHASNHDDFDAAVPYPWAPANLHPDLEIAAIVIQVPFEKRESLKYRRGEKFSNKVHSDFLDLSMVEQKKKDVLDMSPAKVKVVTASGNHGLPSGDSRGPSSLLDRWRLGGGCDCGGWDMACPLIVFDNPSILRVEDCPLMESP----QPLELFVQGAKERVPALTITRVEEGQYAVDFHAQLSTLQAFSICVAMLHSSEAFSTTGDEKNRHLLHCNSLKMLIEEEVKFLIEAVTEEEKRKVPKLVEGTLPPFVFNPPFSPIAR 757    
BLAST of DCAR_006741 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q8H0 ((Eukaryotic translation initiation factor 4 gamma 1 like {ECO:0000313|EMBL:PSS04175.1}))

HSP 1 Score: 537.339 bits (1383), Expect = 1.105e-176
Identity = 335/765 (43.79%), Postives = 453/765 (59.22%), Query Frame = 0
 
Query:    1 MDLEFEKICVVDGSPNTVLLCPRQFYKVER-----EKTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV--TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEHRSS-AMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEA---SMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLG--SVDEHIPIAKVSIKRNKRLHRSLLPDFSKTSWNT-CESQIV-KEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGH------SPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQR----TNCLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENV-QDEKKKA--------PASFVLNPPFSPIAR 730
            M+LEF+K C V  SP TVL  PR+  KV +     EKT+   + L  ++GF++I   +Y   SCK   ++++  EGN+ L+RGSVYQSS+EV  T K   + G RRKIE  + S    S+G+V++LC SDED S +E + + AMS NS++        + S  CT     S SR P                          +YAE  E+E         DP      D +GL +RD+   + KSLSA+  LP++  + ES+   P +  S  SP ++  +P  + +SQRSPLG  S    IP    +I+RN  L +SLL DFS TS      SQ   K+     + CSPAHL G LK +N+HG+P+FEF +K PE+  +A+TWK  NALNW YTFH   N+ ++I+  WG+K+  K+S++VGQMQVSC L ++L DAGA  +S VTEFVLYD+  AR+ ++++++   S +  KP      +  GG+C+L          D+PK+     H       PW P  +HP+ EIAA+VIQVP  KRE+LK K  + KS+  + NL D    +QR    ++     KVNVVT+SGNH LP  E  GPS LLDRW+ GGGCDCGGWDM CPL  FDN N R  E H P+ N+QP +L++QG KE +PA  MT T+EG Y VDFHAQLSTLQAFSICV+ILH TEA+ A +  RD +  QC+SL  L+ E++K + E V ++E++KA        P SF  NPPFSPIAR
Sbjct:    5 MELEFDKYCRVGSSPKTVLPSPRRLSKVGKRRSIKEKTDCASNLLILEEGFTEINLHQYRSLSCKNIPTRTSGLEGNEALRRGSVYQSSREVRKTTKSEAEEG-RRKIELSESSAINFSLGIVDNLCSSDEDISVMEPKITLAMSPNSDN-------VLASDACTENHLDSHSRDP--------------------------RYAENVEIEKIEDPKFRCDPIVGPINDGNGLWERDSAVALHKSLSAKLALPHSPSQSESDSFRPSSPKSRFSPIKKMFDPFTKSRSQRSPLGPASGSRGIP---SNIRRNNTLRKSLLSDFSNTSLGPDLYSQFAKKDIGNSAVSCSPAHLRGSLKLENKHGVPFFEFSLKFPEEVFVARTWKPDNALNWAYTFHCLHNRRKSIASGWGLKDWKKDSSLVGQMQVSCYLCTELKDAGAFNSSMVTEFVLYDVAHARQSVSSQENPNQSPDIVKPPKVSNQSSVGGSCEL----------DEPKHAIENAHFDLPTSHPWTPMVMHPSLEIAAVVIQVPFGKRENLKHKGGDVKSDHPHPNLLDLSSAEQRKVGASDYSRSAKVNVVTTSGNHSLPCTESRGPSPLLDRWRLGGGCDCGGWDMACPLTVFDNPNARNAEAHPPVENRQPLELFVQGAKENTPALTMTVTEEGRYSVDFHAQLSTLQAFSICVAILHCTEASTAVRWERDRQLLQCNSLRVLIGEEVKNLIEAVTEEEERKASKKMEEIPPTSFKPNPPFSPIAR 722    
BLAST of DCAR_006741 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A5BH79 (TFIIS central domain-containing protein {ECO:0000259|PROSITE:PS51321})

HSP 1 Score: 542.732 bits (1397), Expect = 5.599e-176
Identity = 334/761 (43.89%), Postives = 465/761 (61.10%), Query Frame = 0
 
Query:    1 MDLEFEKICVVDGSPNTVLLCPRQFYKV----EREKTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV-TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEH-RSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCS--TPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHIPIAK--VSIKRNKRLHRSLLPDFSKTSWNT-CESQIVK-EYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSD----LRKYSDQPKNV--FNGG-HSPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRTN---CLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSNRCPEDHSPI-NNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENVQDE-KKKAPA-------SFVLNPPFSPIAR 730
            M+L+FEK C +  SP TVL   +++  +     +EK  +  + LS ++ F++I F  +   SCK  + +    EGN  LKRGS+YQSS+EV   K +G V  RRKIE  + S ++    +V+SLC SDE+   +E  RS   SLNS+      + S   KPC+      SS    L R  S + F +I L  ++ +N SA+ AER  +  S    D       D + L +R+T   + KSLSA+  LP++  + ES+ S  +P   F+   P R+  +P  + KSQRSPL SV +   + K   S + NK   +SLL DF+ T+ +    SQ  K E+    +PCSPAHLHGHLK + +HG+P+FEF +K PED ++AKTWKV NA NW+YTFH+ +N+ ++ +  WG+K+SNKE++MVGQMQVSC L S+L D G   NS VTEFVLYDI  ARK I A+++S  S +AA+P       LAG + +L + SD    L+  ++   N   F+     PW PA+LHP+ EIAAIVIQVP EKRESLK +R  + SN+ + +  D   ++Q+      +S  KV VVT+SGNHGLP+ +  GPS LLDRW+ GGGCDCGGWDM CPL+ FDN +    +  P+    QP +L++QG KE+ PA  +T  +EG+Y VDFHAQLSTLQAFSICV++LHS+EA       ++     C+SL  L++E++K++ E V +E K+K P         FV NPPFSPIAR
Sbjct:  184 MELDFEKYCSLGLSPRTVLPSNQRYLGIGKRNTKEKPARRSNLLSIEEDFAEISFGDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEEVRKKKKMGAVEGRRKIELSRSSDSSFPFRIVDSLCSSDEEDPVLEEKRSPVKSLNSD-----LNASSVRKPCSQVFSLPSSPGHFLTRGGSSDGFFEIGLNLDNRENHSAESAERDSIRDSKFKCDDVVGPQNDSNDLLERETVLTLYKSLSAKVALPHSPSQSESDYSRTSPKARFN---PIRKMFDPFTKSKSQRSPLHSVVKPGGVTKGPASGRNNKTFRKSLLHDFANTTQHVELASQFAKKEFHHYAVPCSPAHLHGHLKLETKHGVPFFEFSLKHPEDVLVAKTWKVNNAFNWVYTFHSIRNRKKSNASGWGLKDSNKETSMVGQMQVSCYLCSELQDGGKFGNSMVTEFVLYDIAHARKSITARENSCHSPQAAEPAKGSNEGLAGQSLELDDVSDDAVKLKCQTNHASNHDDFDAAVPYPWAPANLHPDLEIAAIVIQVPFEKRESLKYRRGEKFSNKVHSDFLDLSMVEQKKKDVLDMSPAKVKVVTASGNHGLPSGDSRGPSSLLDRWRLGGGCDCGGWDMACPLIVFDNPSILXVEDCPLMEXPQPLELFVQGAKERVPALTITRVEEGQYAVDFHAQLSTLQAFSICVAMLHSSEAFSTTGDEKNRHLLHCNSLKMLIEEEVKFLIEAVTEEXKRKVPKLVEGTLPPFVFNPPFSPIAR 936    
BLAST of DCAR_006741 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BGA7 ((Uncharacterized protein {ECO:0000313|EMBL:MPA67645.1}) (Fragment))

HSP 1 Score: 513.457 bits (1321), Expect = 1.026e-168
Identity = 308/626 (49.20%), Postives = 405/626 (64.70%), Query Frame = 0
 
Query:  129 VEH-RSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDE--HIPIAKV-SIKRNKRLHRSLLPDFSKTSWNT-CESQIV-KEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGH-----SPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQR----TNCLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENV-QDEKKKA-------PASFVLNPPFSPIAR 730
            +EH RSS MSLNS+ +T+  S    ++PC S+ F   S        VS N F +IS    + +NQSA+  ER+ +E      DP      D + L++RDT   + KSLSA+  LP++  + E NCS   +  +  SP R+  +P  + KSQRSPLGSV+E   +  A V SI+RNK   +SLL DFS TS ++   SQ V K+     +PCSPAHLHG LK + +HG+P+FEF +K PED ++AKTWK  N L+W+YTFH+ QN+ ++ +  WG K+S KES+MVGQMQVSC L ++L DAG  +NS VTEFVLYDI  ARK +AA++    S +  K       +L   T +L E SD  K   QPK+  + GH      PW PADLHPN E+AAIVIQ+P EK E+LK KR +  S+Q + NL D    +QR    ++CLS  KVNVVT SGNH LP++E  GPS LLDRW+ GGGCDCGGWDM CPL+ F N N +  EDH  + NQQ  +L+ QG KE +PA  +T  +EG Y VDFHAQLSTLQAFSICV+ILHSTEA+   +Q RD +  QC+S+   ++E++KY+ E V ++EK+KA       P SFVL+PPFSPI+R
Sbjct:    2 MEHTRSSVMSLNSDLNTTSVSKR-HAEPC-SQVFLDLSFHHGRDSVVSSNCFSEISQNLNNRENQSAENVERETIEDPKFRCDPIVVPLNDGNVLQERDTALTLHKSLSAKLALPHSPSQSEINCSRASSPKARFSPIRKMFDPFTKSKSQRSPLGSVNEPGELTAAGVASIRRNKTFRKSLLHDFSNTSQHSEIGSQFVNKDPHYSAVPCSPAHLHGRLKLEKKHGVPFFEFSLKFPEDLLVAKTWKAENTLHWVYTFHSVQNRRKSNASGWGWKDSKKESSMVGQMQVSCYLCTELKDAGLFDNSMVTEFVLYDIAHARKSVAAQEIYNHSPDVVKHPKGSNESLISRTRELDEVSDQLKLKLQPKDAHDNGHFDSSTHPWAPADLHPNLEVAAIVIQMPFEKGENLKSKRGDVNSDQPHPNLLDLSVAEQRKKRISDCLSPAKVNVVTPSGNHSLPSSESRGPSPLLDRWRLGGGCDCGGWDMACPLIVFGNPNIQSAEDHPLMENQQRLELFAQGAKENTPALTITVIEEGLYAVDFHAQLSTLQAFSICVAILHSTEASITLEQERDKQLLQCNSMRVFIEEEVKYLIEEVTEEEKRKASQKMEEIPPSFVLSPPFSPISR 625    
BLAST of DCAR_006741 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0DKJ7 ((Bromo-adjacent domain protein, putative {ECO:0000313|EMBL:GFS37137.1}))

HSP 1 Score: 513.457 bits (1321), Expect = 2.709e-167
Identity = 327/762 (42.91%), Postives = 448/762 (58.79%), Query Frame = 0
 
Query:    1 MDLEFEKICVVDGSPNTVLLCPRQFYKVER-----EKTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV--TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEHRSSA-MSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSV--DEHIPIAKVSIKRNKRLHRSLLPDFSKTSWNT-CESQIV-KEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGH------SPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQR----TNCLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENV-QDEKKKAPASF--------VLNPPFSPIAR 730
            M+LEF+K C V  SP TVL  P++  KV +     EKT+   + L  ++GF++I   +Y   SCK   ++++  EGN+ L+RGSVYQSS+EV  T K   + G RRKIE  +      S+G+V++LC SDED S +E +    MS NS++        + S   T     S SR P                       + A+  E +++E      DP      D +GL +RD+   + KSLSA+  LP++  + ES+   P +  S  SP ++  +P  + KSQRSPLG       IP    +I+RN  L +SLL DFS TS      SQ V K+     + CSPAHL G LK +N+HG+P+FEF +K PE+  +A+TWK  NALNW YTFH   N+ ++I+  WG+K+  K+S++VGQMQVSC L ++L DAGA  +S VTEFVLYD+  AR+ ++++++   S +  KP      +  GG+C+L          D+PK+     H       PW P  +HP+ EIAA+VIQVP EKRE+LK K  + KS+  + NL D    +QR    ++     KVNVVT+SGNH LP  E  GPS LLDRW+ GGGCDCGGWDM CPL  FDN N R  E H P+ N+QP +L++QG KE +PA  MT T+EG Y VDFHAQLSTLQAFSICV+ILH TEA+ A +  RD +  QC+SL  ++ E++K + E V ++E++KA              NPPFSPIAR
Sbjct:   19 MELEFDKYCRVGASPKTVLPSPQRLSKVGKRRSIKEKTDCASNLLILEEGFTEINLHQYRSLSCKNIPTRTSGLEGNEALRRGSVYQSSREVRKTTKSEAEEG-RRKIELSESRAINFSLGIVDNLCSSDEDISVMEPKIPLDMSPNSDN-------VLASDMRTENHLDSHSRDP-----------------------RYAENVEIEKIEDPKFRCDPIVGPINDGNGLWERDSAVALHKSLSAKLALPHSPSQSESDSFRPNSPKSRFSPIKKMFDPFTKSKSQRSPLGPACGSRGIP---SNIRRNNTLRKSLLSDFSNTSLGPDLYSQFVKKDIGNSAVSCSPAHLRGSLKLENKHGVPFFEFSLKFPEEVFVARTWKPDNALNWAYTFHCLHNRRKSIASGWGLKDWKKDSSLVGQMQVSCYLCTELKDAGAFNSSMVTEFVLYDVAHARQSVSSQENPNQSPDIVKPPKVSNQSSVGGSCEL----------DEPKHAIENAHFDLPTSHPWTPTVMHPSLEIAAVVIQVPFEKRENLKHKGGDVKSDHPHPNLLDLSSAEQRKVGASDYSRSAKVNVVTTSGNHSLPCTESRGPSPLLDRWRLGGGCDCGGWDMACPLTVFDNPNARNAEAHPPVENRQPLELFVQGAKENTPALTMTVTEEGRYSVDFHAQLSTLQAFSICVAILHCTEASTALRWERDRQLLQCNSLRVVIGEEVKNLIEAVTEEEERKASKKMEEIPPPSFKPNPPFSPIAR 736    
BLAST of DCAR_006741 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1Q3AQL6 ((DUF3527 domain-containing protein {ECO:0000313|EMBL:GAV57954.1}))

HSP 1 Score: 509.605 bits (1311), Expect = 2.500e-165
Identity = 323/760 (42.50%), Postives = 439/760 (57.76%), Query Frame = 0
 
Query:    1 MDLEFEKICVVDGSPNTVLLCPRQFYKVERE--KTNKPH--DALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEVT-MKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEHRSSAMSLNSESSTSVTSTSVTS---KPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHIPIAKVSIKRNKRLHRSLLPDFSKTSWNTC--ESQIVKEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNG---------GHSPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRTNCLSQT---KVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDN-SNRCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENVQDEKKKA-------PASFVLNPPFSPIAR 730
            M+   EK   VD SPNTVL  PR    +E+   + N  H  D LS K GF++I FRRY  +SCK + S+S   E N  LKRGS+YQSS+EVT MK  G    R KIE    S  + S  + +SLC  DE++   ++R    S+NS    S+T TS+     +PC S                  N F++I L S+  +  S +  E+  ++  + N++       D +GL +RDT   +QKS S +  +PY     +S+CS+  +  +  SP R+  +P  + KS RSPLG V E   +  V+++  + + +SLL DFS +  N+     +I K+     + CSP HLHG LK  N+  +P+FEF + S E+ ++ + WK  NA NW+YTF +  +K++  +  WG  + NKES+MVGQMQVSC L S+L  +G L NS VTEFVLYDI  AR+ I++K+ S  S +  K        L GGT +L +  D  K     K+  +             PW  ADLHPN EIAA VIQVP EKRESLK KR ++  +  + NL     ++ R   L      KV VV  +GNHGLPTAE   PS LLDRW+ GG CDCGGWDMGCPLV F N S  C ED   + NQQP +L+++G KE +PAF M+  +EG+Y VDFHAQLSTLQAFSICV+ILH  EA+ A  Q R  + +QC SL  L++E++K++ E V +E KK        P S+V+NPPFSPI+R
Sbjct:   33 MEFNNEKKGTVDLSPNTVLPSPRHRLNIEKRYSRGNLKHKDDILSIKDGFTEISFRRYRSSSCKNTTSRSVRREENVELKRGSIYQSSREVTKMKKTGSDEAREKIELSCTSDTSYSFTIHDSLCSLDEENQ--QNRIPGTSVNS----SLTPTSIGKPYVEPCLS------------------NGFIEICLNSDKREKLSGEPLEKFLLKDLVFNSNEVIGPQNDGNGLHERDTVLRLQKSHSDKVEMPYFPSPSDSDCSSRTSSKTRFSPIRKMFDPFMKSKSLRSPLGYVAE---LDGVNMRTKRTIRKSLLHDFSPSRQNSVFNSQRINKDQHHSVVECSPIHLHGCLKLINKLEVPFFEFSLNSAEEVLVGRIWKADNAFNWVYTFQSIGSKNKTNASGWGSSDINKESSMVGQMQVSCYLCSELK-SGVLYNSMVTEFVLYDIAHARQSISSKECSDCSPDLHKSPPDSDPGLVGGTPELKDGPDAAKPKQHLKHAADHIAFKPSKKQNPYPWASADLHPNLEIAATVIQVPFEKRESLKHKRGDKVIDIVHSNLLKLPIVEPRKKNLPDNLCEKVKVVIPTGNHGLPTAENRAPSTLLDRWRLGGCCDCGGWDMGCPLVVFGNPSIPCAEDEPLVANQQPLELFLKGTKENTPAFTMSIIEEGQYAVDFHAQLSTLQAFSICVAILHGKEASTAG-QERGIQLKQCTSLKELIEEEVKFLIEAVTEEGKKVNKKTEEIPRSYVINPPFSPISR 763    
BLAST of DCAR_006741 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4L9T3 ((Uncharacterized protein {ECO:0000313|EMBL:KAE9452059.1}) (Fragment))

HSP 1 Score: 501.516 bits (1290), Expect = 5.462e-163
Identity = 310/758 (40.90%), Postives = 413/758 (54.49%), Query Frame = 0
 
Query:    1 MDLEFEKICVVDGSPNTVLLCPRQFYKVERE----KTNKPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEVTMKDLG-DVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEHRSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHI---PIAKVSIKRNKRLHRSLLPDFSKTSWNT--CESQIVKEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGH------SPWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRT----NCLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSNRCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENVQDEKKK--------APASFVLNPPFSPIAR 730
            M+LEFEK C V GSP TVL  PR   K+E+     K N P+  L+ +    +I FRRY  +SCK + S ++  E  +VLKRGSVYQSS+EV M + G DV  R KIE           G+ +SLC  +ED+                                               VS +  L+ +  S   +  SA+  ER ++E      DP      D +GL++R+      KSLS++  +P+     E + S      S  SP R+  +P  + KSQRSPLGS    I   P     IKR++ L +SLL DFS  S +       + K+ S   +  SPAHLHG LK +N+ G+P+FEF  K PED  + + WK  NALNW+YTFH   N+ ++ +  WG+K+ NKES+++GQMQVSC L ++L D G  +N  VTEFVLYD+ +AR+  A + +   S + AKP      N   GT +L + +D    + Q K+     H       PW P DLHP  EIAAIVIQVP  KRESLK K  +  S+Q + NL D      +     +C   TKVNVVT+SGNH L   +  GPS LLDR++ GGGC+CGGWDMGCPL  F N    P   S   NQQP +L+IQG KE +PA  M   +EG Y VDFHA+LS+LQAFSICV++LH TEA+ A +  RD +  QC+ L   ++E++K I E V  E+++         P SF  NPPFSPIAR
Sbjct:   10 MELEFEKYCKVGGSPKTVLPPPRHPSKIEKXSSKGKXNCPNGLLTLEDNIKEINFRRYRSSSCKNTPSXTSGVERKEVLKRGSVYQSSREVRMMNKGEDVDCRTKIELSGSHAXTFPSGIFDSLCAINEDNV----------------------------------------------VSSDVLLETAWDSNSREQISAENVERGKIEDPKFRCDPIVGPTNDGNGLEEREGSLTFHKSLSSKLAVPHPPSPAEGDSSK-----SRFSPFRKMFDPFTKSKSQRSPLGSTGGSIGLPPARPPIIKRSQTLQKSLLNDFSNVSQSVELNPPSVKKDISNSAVSRSPAHLHGFLKLENKQGVPFFEFTSKFPEDVFVTRRWKAENALNWVYTFHNLHNRRKSNASGWGLKDLNKESSIMGQMQVSCYLCTELRDVGDFDNYMVTEFVLYDVARARQSDAVQGNLNXSPDVAKPPKVSNPNSFSGTRELDDVADESNLNLQQKHATKSTHFDSSTPRPWVPTDLHPGLEIAAIVIQVPFGKRESLKNKGGDAMSDQLHRNLLDLSSHKXKKEGIPDCSRPTKVNVVTTSGNHSLGGNDSCGPSPLLDRFRLGGGCECGGWDMGCPLTVFGN----PGIQS-AENQQPLELFIQGVKEYTPALTMKVIEEGRYSVDFHAKLSSLQAFSICVAMLHCTEASSAVRWERDKQSLQCNPLRVFIEEEVKNIIEAVAKEEERKVVKKMEEIPPSFKPNPPFSPIAR 711    
BLAST of DCAR_006741 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6TTA0 ((uncharacterized protein LOC113703879 {ECO:0000313|RefSeq:XP_027081172.1, ECO:0000313|RefSeq:XP_027081173.1}))

HSP 1 Score: 499.975 bits (1286), Expect = 8.364e-162
Identity = 317/759 (41.77%), Postives = 449/759 (59.16%), Query Frame = 0
 
Query:    1 MDLEFEKICVVDGSPNTVLLCPRQFYKVEREKTN----KPHDALSPKQGFSDIRFRRYSRASCKRSQSKSTVPEGNKVLKRGSVYQSSQEV-TMKDLGDVGDRRKIEFPQGSVNALSIGVVNSLCDSDEDSSSVEH-RSSAMSLNSESSTSVTSTSVTSKPCTSKEFFSSSRQPILKREVSLNSFLKISLKSEDGKNQSAKYAERKEVEASMCNNDPTFSLPRDDSGLKKRDTGSVMQKSLSARPVLPYTHPRLESNCSTPGTLFSGLSPTRETSEPLPELKSQRSPLGSVDEHI---PIAKVSIKRNKRLHRSLLPDFSKTSWNT-CESQIVKEYSKPPLPCSPAHLHGHLKFKNRHGMPYFEFLVKSPEDKIIAKTWKVGNALNWLYTFHTSQNKSRAISPNWGIKESNKESAMVGQMQVSCLLRSDLNDAGALENSTVTEFVLYDIKQARKDIAAKKDSFSSLEAAKPLTSVKTNLAGGTCKLHETSDLRKYSDQPKNVFNGGHS------PWEPADLHPNNEIAAIVIQVPLEKRESLKEKRRNQKSNQSYINLHDFEGLDQRT----NCLSQTKVNVVTSSGNHGLPTAECPGPSRLLDRWKSGGGCDCGGWDMGCPLVTFDNSN-RCPEDHSPINNQQPWKLYIQGGKEKSPAFRMTGTKEGEYEVDFHAQLSTLQAFSICVSILHSTEATDAAKQSRDDKFQQCDSLSGLLDEDIKYIFENVQDEKK--------KAPASFVLNPPFSPIAR 730
            M+LEF+K C+VDGSP TVL  PR   KVE+ K+       +D L+  + FS+I F RY   SCK + S++T    ++V KRGSVYQSS+EV  M+       R+KIEF Q S  ALS G+++SLC SDE+SS VE  RSS MS NS+ ST+    S       S +F      P+  + +  +   ++S + +   +Q A+ AER+ V      + P      D + L +RD G  + KSLSA+  LP++  R ES+ S   +  +   P R+  +P  + KSQRSPL +  E I   P   VSI R+K   +SLL DFS T      +S  +K+ +   +  + AHL G LK   +H  P FEF  K PED  +A+TWKVGNALNW+YTFH+   + ++ +   G KES++ S+MVGQMQVSC L ++L +AGA +NS +TEFVLYD+   RK +++ +D+   +E A+   +   N   G+  L   S   K   Q K+  + GH       P   A+LHP+ +I AIV+QVP EKRESLK K  ++K +   +N  D  G +       + +S  K++VV  SGNH LPT+E  GPS L+DRW+ GGGCDCGGWDM CPL  F N   R  + H  ++N+QP KL+ QG K+ +PA  M   ++G+Y VDFHAQLSTLQAFSICV++LH  E++ +++Q  + +  Q +SL   ++E++K + + V +E K        +   SF++NPPFSPIAR
Sbjct:    1 MELEFDKYCIVDGSPTTVLPSPRCHSKVEKRKSKGYPRHGNDLLTVNEDFSEISFHRYRSVSCKNTSSRTTPLGYDEVRKRGSVYQSSKEVRLMRKTAATEGRKKIEFSQSSATALSFGILDSLCGSDEESSQVEQKRSSVMSQNSDFSTAAICKS--GADLQSDDFLDICLNPVSIKGIPPDGSSELSFELDGRDDQCAENAERQSVHGPKFKSKPVVVPVSDGNSLHERDPGFSLHKSLSAKLALPHSPARSESDSSRTSSPMTRFGPVRKVFDPFVKSKSQRSPLSASGETISRNPTGLVSISRSKTSRKSLLHDFSNTGQRMEFQSWSMKDNNNQVVQSTVAHLQGILKVNKKHECPIFEFSTKFPEDFFVARTWKVGNALNWIYTFHSVNERRKSNASGRGSKESHRVSSMVGQMQVSCYLSAELKEAGAFDNSMMTEFVLYDMLHPRKSVSS-QDNCCFIEVAEAPKASDENSFVGSHNLDAGSVKTKIKGQAKHGCDSGHVESSMTYPLPAAELHPHLQIGAIVVQVPYEKRESLKFKSSDKKMDLPLLNFLDHSGGEHEKELVPDSVSPVKMDVVIPSGNHSLPTSESHGPSPLMDRWRLGGGCDCGGWDMACPLHIFSNLRIRMADSHLLMDNRQPLKLFFQGKKDTTPALTMAVMQDGQYAVDFHAQLSTLQAFSICVAVLHIMESSVSSRQEENKQLLQSNSLRVFIEEEVKNLIDAVTEEDKCKGNKKMAEVLPSFIVNPPFSPIAR 756    
Match NameStatsDescription
A0A4S4EY59E-Value: 0.000e+0, PID: 45.41(Uncharacterized protein {ECO:0000313|EMBL:THG2199... [more]
F6HUC6E-Value: 2.029e-178, PID: 44.05(Uncharacterized protein {ECO:0000313|EMBL:CCB5834... [more]
A0A438JJU5E-Value: 3.071e-178, PID: 44.05(Uncharacterized protein {ECO:0000313|EMBL:RVX0920... [more]
A0A2R6Q8H0E-Value: 1.105e-176, PID: 43.79(Eukaryotic translation initiation factor 4 gamma ... [more]
A5BH79E-Value: 5.599e-176, PID: 43.89TFIIS central domain-containing protein {ECO:00002... [more]
A0A5B7BGA7E-Value: 1.026e-168, PID: 49.20(Uncharacterized protein {ECO:0000313|EMBL:MPA6764... [more]
A0A7J0DKJ7E-Value: 2.709e-167, PID: 42.91(Bromo-adjacent domain protein, putative {ECO:0000... [more]
A0A1Q3AQL6E-Value: 2.500e-165, PID: 42.50(DUF3527 domain-containing protein {ECO:0000313|EM... [more]
A0A6A4L9T3E-Value: 5.462e-163, PID: 40.90(Uncharacterized protein {ECO:0000313|EMBL:KAE9452... [more]
A0A6P6TTA0E-Value: 8.364e-162, PID: 41.77(uncharacterized protein LOC113703879 {ECO:0000313... [more]

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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions.

For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins.

Data from this analysis can be viewed in JBrowse here.

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