Resource Type:
Polypeptide
Name:
DCAR_006855
Identifier:
DCAR_006855.mRNA-protein
Sequence:
MASNGTDCPHPMKATSNGVFQGDSPLDYALPLIILQICLVLVFTRFLAYL
LKPMRQPRGGILLGPSAFGRSKTYLDAVFPKKSHTVLDTVANLGLLFFLF
LVGLELDPKALGRTGKKALAIALAGISVPFVLGIGVSFVLRGTISQGVDE
APFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWI
LLALAIALSGSGRSPLISLWVLLCGAAFIVGCIIVVPPLFKWMARHCPEG
EPVDEMYVCAILALVLAAGFVTDTIGIHALFGAFVIGVLVPKDGPFAGAL
VEKVEDLVSGLLLPLYFVSSGLKTDVTTIKGLQSWGLLVMVIATACIGKI
FGTVGVSLLCKMPFKEALALGILMNTKGLVELIVLNIGKDRGVLNDQTFA
ILVLMALFTTFITTPLVVAVYKPHKKVDKKAYKHRTVERSETNSQLRILA
CFHGARNIPSLINLIEASRGTGRRGGLRVYAMHLMELSERSSSMLMVHRA
RRNGLPFWNKVGSSDSTQIVVAFETFQHLSKVSIQPTTAISPMATMHEDI
CGSADTKKVAMIILPFHRHQRLDGLLETTRSEFRQVNRKVLERAPCSVGI
LIDRGLGGSSHVTARNVDYVMTVLFFGGHDDHEALAYGKRMAEHPGISLI
VVRFVLDSKVTGGVISVDMSDFTNAEERAIDDQVLDDLKRTISDKKMKYE
ERIVNSAAQTIEVISEFSKCNLFLVGRIPEGEIARSLLTKTDTPELGPIG
SFLVTPEFSTEASVLVVQQYHSNMSVHSLASLKSEDEGKDDESSDDDEK*
Sequence Length:
800
Sequence Checksum:
eb6f5d01f5cc4174d7d0cde7c5180c26
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_006855, derives from mRNA, DCAR_006855. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_006855 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_006855 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4D3Q1 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1194.1 bits (3088), Expect = 0.000e+0
Identity = 580/804 (72.14%), Postives = 682/804 (84.83%), Query Frame = 0
Match: A0A4S4D3Q1 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1194.1 bits (3088), Expect = 0.000e+0
Identity = 580/804 (72.14%), Postives = 682/804 (84.83%), Query Frame = 0
Query: 1 MASNGT-DCPHPMKATSNGVFQGDSPLDYALPLIILQICLVLVFTRFLAYLLKPMRQPR------GGILLGPSAFGRSKTYLDAVFPKKSHTVLDTVANLGLLFFLFLVGLELDPKALGRTGKKALAIALAGISVPFVLGIGVSFVLRGTISQGVDEAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSGRSPLISLWVLLCGAAFIVGCIIVVPPLFKWMARHCPEGEPVDEMYVCAILALVLAAGFVTDTIGIHALFGAFVIGVLVPKDGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTDVTTIKGLQSWGLLVMVIATACIGKIFGTVGVSLLCKMPFKEALALGILMNTKGLVELIVLNIGKDRGVLNDQTFAILVLMALFTTFITTPLVVAVYKPHKKVDKKAYKHRTVERSETNSQLRILACFHGARNIPSLINLIEASRGTGRRGGLRVYAMHLMELSERSSSMLMVHRARRNGLPFWNKVGSSDSTQIVVAFETFQHLSKVSIQPTTAISPMATMHEDICGSADTKKVAMIILPFHRHQRLDGLLETTRSEFRQVNRKVLERAPCSVGILIDRGLGGSSHVTARNVDYVMTVLFFGGHDDHEALAYGKRMAEHPGISLIVVRFVLDSKVTGGVISVDMSDFTNAEERAIDDQVLDDLKRTIS-DKKMKYEERIVNSAAQTIEVISEFSKCNLFLVGRIPEGEIARSLLTKTDTPELGPIGSFLVTPEFSTEASVLVVQQYHSNMSVHSLASLKSEDEGKDDESSDD 796
MASN T CP PMKATSNGVFQGD PL++ALPL ILQICLV+V TR LA+LL+P+RQPR GGILLGPSA GR++ YL VFP KS+TVLDT+ANLGLLFF+FLVGLELDP++L RTGKKAL+IA AGIS+PF LGIG SFVLRGTIS+GV+EAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALS +G SPLISLWV LCG AF+V CI +VP +FKWMA+ CPEGEP+DEMYVCA LA VLAAGFVTD+IGIHALFGAFVIGVLVPKDGPFAG LVEKVEDLVSGLLLPLYFVSSGLKT+V TI+G QSWGLL +VI TAC GKI GT+ +SL+C++PF+EA+ALG LMNTKGLVELIVLNIGKDRGVLNDQTFAI+VLMALFTTFITTPLV+AVYKP K++ K YKHRTV+R N+QLRILACFH A N+P+LINLIE SRGT ++ GL VYAMHLMELSERSS++LMVH+ R+NGLPFWNK S + Q VVAFE F+ LS+VS++P TAISPM +MHEDIC SA++K+ A+IILPFH+HQRLDG LETTR++FR VNR+VL APCSVGIL+DRGLGG + ++A N D +TVLFFGG+DD EALAYG RMAEHPGI+L V+RF +D KV G ++ +DM D E R+ DD+ + + K+ +S D +KYEERIV+SAA+T+E+I E +C+L LVGR+PEG++ +L +++ PELGP+GS L++P+ S ASVLVVQQYHS +S+ SLASLK E+E + E D
Sbjct: 1 MASNVTVQCPTPMKATSNGVFQGDDPLNFALPLAILQICLVVVVTRALAFLLRPLRQPRVIAEIIGGILLGPSALGRNQAYLHKVFPPKSYTVLDTLANLGLLFFMFLVGLELDPRSLRRTGKKALSIACAGISLPFALGIGASFVLRGTISKGVNEAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSSTGHSPLISLWVFLCGCAFVVCCIFIVPWVFKWMAQRCPEGEPMDEMYVCATLATVLAAGFVTDSIGIHALFGAFVIGVLVPKDGPFAGVLVEKVEDLVSGLLLPLYFVSSGLKTNVATIQGAQSWGLLALVICTACFGKIVGTIAISLMCRVPFQEAVALGFLMNTKGLVELIVLNIGKDRGVLNDQTFAIMVLMALFTTFITTPLVMAVYKPAKRMGKAEYKHRTVQRKYPNTQLRILACFHSAGNLPTLINLIEGSRGTEKKEGLCVYAMHLMELSERSSAILMVHKVRKNGLPFWNKGQQSGTNQTVVAFEAFRQLSRVSVRPMTAISPMNSMHEDICASANSKRAAIIILPFHKHQRLDGQLETTRTDFRHVNRRVLVHAPCSVGILVDRGLGGRTQISASNFDSSITVLFFGGNDDREALAYGARMAEHPGINLRVIRFSVDPKVIGEIVRIDMDDNNAIEARSEDDEFISEFKQKVSKDGSIKYEERIVSSAAETVEIIRENCRCSLILVGRMPEGQLVSTLTGRSECPELGPVGSLLISPDLSITASVLVVQQYHSQLSLPSLASLKEEEEEELPERDSD 804
BLAST of DCAR_006855 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6TRS6 ((cation/H(+) antiporter 18-like {ECO:0000313|RefSeq:XP_027081154.1, ECO:0000313|RefSeq:XP_027081155.1}))
HSP 1 Score: 1183.7 bits (3061), Expect = 0.000e+0
Identity = 579/800 (72.38%), Postives = 688/800 (86.00%), Query Frame = 0
Match: A0A6P6TRS6 ((cation/H(+) antiporter 18-like {ECO:0000313|RefSeq:XP_027081154.1, ECO:0000313|RefSeq:XP_027081155.1}))
HSP 1 Score: 1183.7 bits (3061), Expect = 0.000e+0
Identity = 579/800 (72.38%), Postives = 688/800 (86.00%), Query Frame = 0
Query: 1 MASNGT-DCPHPMKATSNGVFQGDSPLDYALPLIILQICLVLVFTRFLAYLLKPMRQPR------GGILLGPSAFGRSKTYLDAVFPKKSHTVLDTVANLGLLFFLFLVGLELDPKALGRTGKKALAIALAGISVPFVLGIGVSFVLRGTISQGVDEAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSGRSPLISLWVLLCGAAFIVGCIIVVPPLFKWMARHCPEGEPVDEMYVCAILALVLAAGFVTDTIGIHALFGAFVIGVLVPKDGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTDVTTIKGLQSWGLLVMVIATACIGKIFGTVGVSLLCKMPFKEALALGILMNTKGLVELIVLNIGKDRGVLNDQTFAILVLMALFTTFITTPLVVAVYKPHKKVDKKAYKHRTVERSETNSQLRILACFHGARNIPSLINLIEASRGTGRRGGLRVYAMHLMELSERSSSMLMVHRARRNGLPFWNKVGSSDSTQIVVAFETFQHLSKVSIQPTTAISPMATMHEDICGSADTKKVAMIILPFHRHQRLDGLLETTRSEFRQVNRKVLERAPCSVGILIDRGLGGSSHVTARNVDYVMTVLFFGGHDDHEALAYGKRMAEHPGISLIVVRFVLDSKVTGGVISVDMSDFTNAEERAIDDQVLDDLKRTISD-KKMKYEERIVNSAAQTIEVISEFSKCNLFLVGRIPEGEIARSLLTKTDTPELGPIGSFLVTPEFSTEASVLVVQQYHSNMSVHSLASLKSEDEGKDDE 792
MASN T CP PMKATSNGVFQG++PLDYALPL+ILQICLV+V TR LAYLL+P+RQPR GG++LGPSA GR++ +L VFP +S TVLDT+ANLGLLFFLFLVGLELDPK+L RTGKKALAIALAGI++PF LGIG SF LR TIS+GV+E PFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALA+ALSG GRSPL+SLWVLLCG+ F++ CI V PP+F+WMAR CPEGEPVDEMYVCA LA+VLAAGFVTDTIGIHALFGAFVIGVLVPK+G FAGALVEKVEDLVSG+ LPLYFVSSGLKT+V TI G Q+WGLL +VI TAC GKI GT+ VSLL KMPF++A+ALG LMNTKGLVELIVLNIGKDRGVLND+TFA++VLMALFTTFITTP+V+AVYKP K+ + YKHRT++R E ++QLR+L CFH +RNIPSLINLIEASRGT ++GGLRVYAMHLMELSERSS++LMVH+AR+NGLPFW+KV SDS Q+VVAFE F+HLSKVSI+PTTAISP+ATMHEDI A+ K V+MIILPFH+HQR+DG LE TR++FR VNR+VL APCSVGIL+DRGLGG+SHV+A NVDY +T LFFGGHDD EA+AYG RMAEHPGI+L+VVRF +D KV G +++D++ + E R+ D++ L + K + + + + +EE++V +AA+T+E + +S+CNLFLVGR+PEG++ +L TD+PELGP+G+FLV PEFST ASVLVVQQY +S SLASL++E G++
Sbjct: 1 MASNATVKCPAPMKATSNGVFQGETPLDYALPLVILQICLVIVLTRILAYLLRPLRQPRVVAEIIGGVILGPSALGRNQKFLHTVFPPRSLTVLDTIANLGLLFFLFLVGLELDPKSLRRTGKKALAIALAGITLPFALGIGTSFALRATISKGVNEGPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAVALSGVGRSPLVSLWVLLCGSGFVLCCIFVAPPIFRWMARRCPEGEPVDEMYVCATLAVVLAAGFVTDTIGIHALFGAFVIGVLVPKEGAFAGALVEKVEDLVSGIFLPLYFVSSGLKTNVATIHGAQAWGLLALVIFTACFGKIVGTIFVSLLSKMPFQQAVALGFLMNTKGLVELIVLNIGKDRGVLNDETFAVMVLMALFTTFITTPIVMAVYKP-AKMARSEYKHRTIQRKEASTQLRLLTCFHSSRNIPSLINLIEASRGTEKKGGLRVYAMHLMELSERSSAILMVHKARKNGLPFWSKVQDSDSNQVVVAFEAFRHLSKVSIRPTTAISPIATMHEDILAGAEKKGVSMIILPFHKHQRIDGHLEATRADFRHVNRRVLRAAPCSVGILVDRGLGGTSHVSASNVDYTITALFFGGHDDREAVAYGARMAEHPGINLVVVRFTVDPKVAGKSVNLDVNKSSGPEARSDDEEFLSEFKENVKEVRSVTFEEKMVTAAAETVEAVRAYSRCNLFLVGRMPEGQLVAALNNTTDSPELGPVGNFLVAPEFSTRASVLVVQQYCRELSEDSLASLEAEGSGEESN 799
BLAST of DCAR_006855 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AK09 ((Putative Cation/H+ exchanger 18 {ECO:0000313|EMBL:MPA56288.1}))
HSP 1 Score: 1180.24 bits (3052), Expect = 0.000e+0
Identity = 588/791 (74.34%), Postives = 682/791 (86.22%), Query Frame = 0
Match: A0A5B7AK09 ((Putative Cation/H+ exchanger 18 {ECO:0000313|EMBL:MPA56288.1}))
HSP 1 Score: 1180.24 bits (3052), Expect = 0.000e+0
Identity = 588/791 (74.34%), Postives = 682/791 (86.22%), Query Frame = 0
Query: 1 MASNGT-DCPHPMKATSNGVFQGDSPLDYALPLIILQICLVLVFTRFLAYLLKPMRQPR------GGILLGPSAFGRSKTYLDAVFPKKSHTVLDTVANLGLLFFLFLVGLELDPKALGRTGKKALAIALAGISVPFVLGIGVSFVLRGTISQGVDEAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSGRSPLISLWVLLCGAAFIVGCIIVVPPLFKWMARHCPEGEPVDEMYVCAILALVLAAGFVTDTIGIHALFGAFVIGVLVPKDGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTDVTTIKGLQSWGLLVMVIATACIGKIFGTVGVSLLCKMPFKEALALGILMNTKGLVELIVLNIGKDRGVLNDQTFAILVLMALFTTFITTPLVVAVYKPHKKVDKKAYKHRTVERSETNSQLRILACFHGARNIPSLINLIEASRGTGRRGGLRVYAMHLMELSERSSSMLMVHRARRNGLPFWNKVGSSDSTQIVVAFETFQHLSKVSIQPTTAISPMATMHEDICGSADTKKVAMIILPFHRHQRLDGLLETTRSEFRQVNRKVLERAPCSVGILIDRGLGGSSHVTARNVDYVMTVLFFGGHDDHEALAYGKRMAEHPGISLIVVRFVLDSKVTGGVISVDMSDFTNAEERAIDDQVLDDLKRTIS-DKKMKYEERIVNSAAQTIEVISEFSKCNLFLVGRIPEGEIARSLLTKTDTPELGPIGSFLVTPEFSTEASVLVVQQYHSNMSVHSLASLK 783
MASNGT CP PMKATSNGVFQGD+PLD+ALPL ILQICLV+V TR LA LL+P+RQPR GGILLGPSA GRS++YL+AVFP KS TVLDT+ANLGLLFFLFLVGLELDP++L RTGKKA+ IA+AGIS+PF LGIG SFVLR T S+GV E PFLVFMGVALSITAFPVLARIL+ELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSG+G SPLI+LWV LCG F++ CI VV P+FKWMA+ CPEGEPVDEMYVCA LA VLAAGFVTD IGIHALFGAFV+GV+VPKDGPFA ALVEKVEDLVSGL LPLYFVSSGLKT+V TI+GLQSWGLLV+VI TAC+GKI GT+ VSL C++PF+EALALG LMNTKGLVELIVLNIGKDRGVLNDQTFAI+V+MALFTTFITTPLV+AVYKP K + K KHRT++R + N+QLR+LACFH +RNIP+LINLIEASRGT +R GL VYAMHLMELSERSS++LMVH+AR+NGLPFWNK SD+ QIVVAFE F+ LS+VSI+P TAISPM++MHEDIC SAD+K+ AMIILPFH+HQRLDG LETTR++FR VNR+VLE APCSVGILIDRGLGG++H+TA NV V+TVLFFGGHDD EALA+G RMAEHPGISL+V+RF++D V G + +DM + ++AE R+ D++ L + K S D +KYEE +V +AA+T+EV+ E S CNLFLVGR+PEG++ +L ++ PELGPIG L +P+FST ASVLVVQQY S + +HSLASLK
Sbjct: 1 MASNGTVKCPPPMKATSNGVFQGDNPLDFALPLAILQICLVVVLTRVLALLLRPIRQPRVIAEIVGGILLGPSALGRSQSYLNAVFPPKSLTVLDTLANLGLLFFLFLVGLELDPRSLRRTGKKAMCIAMAGISLPFALGIGSSFVLRATTSKGVSEGPFLVFMGVALSITAFPVLARILSELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGTGHSPLITLWVFLCGCGFVICCIFVVRPIFKWMAQRCPEGEPVDEMYVCATLAAVLAAGFVTDAIGIHALFGAFVLGVIVPKDGPFANALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVICTACVGKIVGTIAVSLWCRLPFQEALALGFLMNTKGLVELIVLNIGKDRGVLNDQTFAIMVMMALFTTFITTPLVIAVYKPAKSMGKSENKHRTIQRKDPNTQLRMLACFHSSRNIPTLINLIEASRGTEKRKGLCVYAMHLMELSERSSAILMVHKARKNGLPFWNKGQQSDANQIVVAFEAFRRLSRVSIRPMTAISPMSSMHEDICSSADSKRAAMIILPFHKHQRLDGQLETTRTDFRYVNRRVLEHAPCSVGILIDRGLGGTTHITASNVRSVITVLFFGGHDDREALAHGLRMAEHPGISLVVIRFLVDPNVAGEIFKLDMEN-SSAEARSEDEEYLAEFKEKNSEDNSIKYEEIVVGNAAETVEVMRERSLCNLFLVGRMPEGQLVAALNKNSECPELGPIGGLLTSPDFSTTASVLVVQQYRSQLPLHSLASLK 790
BLAST of DCAR_006855 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EF16 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1177.16 bits (3044), Expect = 0.000e+0
Identity = 588/791 (74.34%), Postives = 689/791 (87.10%), Query Frame = 0
Match: A0A4S4EF16 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1177.16 bits (3044), Expect = 0.000e+0
Identity = 588/791 (74.34%), Postives = 689/791 (87.10%), Query Frame = 0
Query: 2 ASNGT-DCPHPMKATSNGVFQGDSPLDYALPLIILQICLVLVFTRFLAYLLKPMRQPR------GGILLGPSAFGRSKTYLDAVFPKKSHTVLDTVANLGLLFFLFLVGLELDPKALGRTGKKALAIALAGISVPFVLGIGVSFVLRGTISQGVDEAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSGRSPLISLWVLLCGAAFIVGCIIVVPPLFKWMARHCPEGEPVDEMYVCAILALVLAAGFVTDTIGIHALFGAFVIGVLVPKDGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTDVTTIKGLQSWGLLVMVIATACIGKIFGTVGVSLLCKMPFKEALALGILMNTKGLVELIVLNIGKDRGVLNDQTFAILVLMALFTTFITTPLVVAVYKPHKKVDKKAYKHRTVERSETNSQLRILACFHGARNIPSLINLIEASRGTGRRGGLRVYAMHLMELSERSSSMLMVHRARRNGLPFWNKVGSSDSTQIVVAFETFQHLSKVSIQPTTAISPMATMHEDICGSADTKKVAMIILPFHRHQRLDGLLETTRSEFRQVNRKVLERAPCSVGILIDRGLGGSSHVTARNVDYVMTVLFFGGHDDHEALAYGKRMAEHPGISLIVVRFVLDSKVTGGVISVDM-SDFTNAEERAIDDQVLDDLKRTIS-DKKMKYEERIVNSAAQTIEVISEFSKCNLFLVGRIPEGEIARSLLTKTDTPELGPIGSFLVTPEFSTEASVLVVQQYHSNMSVHSLASLK 783
+SN T +CP PMKATSNGVFQGD PLDYALPL ILQICLV+V TR LA+LL+P RQPR GG+LLGPSA GRS+ YL VFP KS+ VLDT+ANLGLLFFLFLVGLELDP++L RTGKKAL+IA+AGIS+PF LGIG SFVLRGTIS+GV+EAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAI+LSG+ SPLISLWV LCG AF++ CI+VVP +FKWMA+ CPEGEP+DEMYVCA L +VLAAGFVTD+IGIHALFGAFVIGVLVPKDGPF GALVEKVEDLVSGL LPLYFVSSGLKT+V TI G+QSWGLLV+VI TAC GKI GTV VSL+CK+PF EAL LG LMNTKGLVELIVLNIGKDRGVLNDQTFAI+VLMALFTTFITTPLV+AVYKP K++ + YK RT++R++ NS+LRILACFH RNIP+LINLIEASRGT +R GL VYAMHLMELSERSS++LMVH+AR+NGLPFWNK + D+ QIVVAFE F+ LS+V I+P TAISPM +MHEDIC SA++K A+IILPFH+HQRLDG LE TR++FR VNR+VLE APCSVGIL+DRGLGGS+HV+A NVD V+TVLFFGG DDHEALAYG RMAEHPGISL+V+RF++D VTG +++VD+ +D +++ R+ D++ L + K+ +S + +KYEER+V++AA+T+ VI E ++CNLFLVGR+PEGE+ R+L K + PELGP+GS L + +FST ASVLVVQQYHS +S+HSLASL+
Sbjct: 3 SSNSTLNCPAPMKATSNGVFQGDDPLDYALPLAILQICLVVVLTRLLAFLLRPFRQPRVIAEIIGGVLLGPSALGRSQAYLHKVFPPKSYAVLDTLANLGLLFFLFLVGLELDPRSLRRTGKKALSIAVAGISLPFALGIGSSFVLRGTISKGVNEAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAISLSGTDHSPLISLWVFLCGCAFVIICIVVVPRIFKWMAQSCPEGEPLDEMYVCATLTIVLAAGFVTDSIGIHALFGAFVIGVLVPKDGPFVGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIHGVQSWGLLVLVICTACFGKIVGTVAVSLMCKIPFLEALTLGFLMNTKGLVELIVLNIGKDRGVLNDQTFAIMVLMALFTTFITTPLVMAVYKPAKRIGRGGYKCRTIQRNDPNSKLRILACFHSTRNIPTLINLIEASRGTEKREGLCVYAMHLMELSERSSAILMVHKARKNGLPFWNKGRNYDTNQIVVAFEAFRQLSRVLIRPMTAISPMNSMHEDICNSAESKSAAIIILPFHKHQRLDGQLENTRTDFRYVNRRVLEHAPCSVGILVDRGLGGSTHVSASNVDSVITVLFFGGIDDHEALAYGARMAEHPGISLVVIRFLVDPTVTGEIVTVDINNDSSSSGSRSADEEYLAEFKQKMSKESSIKYEERVVSNAAETVAVIREHNRCNLFLVGRMPEGELVRALNGKGECPELGPVGSLLTSLDFSTTASVLVVQQYHSQLSMHSLASLR 793
BLAST of DCAR_006855 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068UUK7 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1174.07 bits (3036), Expect = 0.000e+0
Identity = 577/800 (72.12%), Postives = 682/800 (85.25%), Query Frame = 0
Match: A0A068UUK7 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1174.07 bits (3036), Expect = 0.000e+0
Identity = 577/800 (72.12%), Postives = 682/800 (85.25%), Query Frame = 0
Query: 1 MASNGT-DCPHPMKATSNGVFQGDSPLDYALPLIILQICLVLVFTRFLAYLLKPMRQPR------GGILLGPSAFGRSKTYLDAVFPKKSHTVLDTVANLGLLFFLFLVGLELDPKALGRTGKKALAIALAGISVPFVLGIGVSFVLRGTISQGVDEAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSGRSPLISLWVLLCGAAFIVGCIIVVPPLFKWMARHCPEGEPVDEMYVCAILALVLAAGFVTDTIGIHALFGAFVIGVLVPKDGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTDVTTIKGLQSWGLLVMVIATACIGKIFGTVGVSLLCKMPFKEALALGILMNTKGLVELIVLNIGKDRGVLNDQTFAILVLMALFTTFITTPLVVAVYKPHKKVDKKAYKHRTVERSETNSQLRILACFHGARNIPSLINLIEASRGTGRRGGLRVYAMHLMELSERSSSMLMVHRARRNGLPFWNKVGSSDSTQIVVAFETFQHLSKVSIQPTTAISPMATMHEDICGSADTKKVAMIILPFHRHQRLDGLLETTRSEFRQVNRKVLERAPCSVGILIDRGLGGSSHVTARNVDYVMTVLFFGGHDDHEALAYGKRMAEHPGISLIVVRFVLDSKVTGGVISVDMSDFTNAEERAIDDQVLDDLKRTISD-KKMKYEERIVNSAAQTIEVISEFSKCNLFLVGRIPEGEIARSLLTKTDTPELGPIGSFLVTPEFSTEASVLVVQQYHSNMSVHSLASLKSEDEGKDDE 792
MASN T CP PMKATSNGVFQG++PLDYALPL+ILQICLV+V TR LAYLL+P+RQPR GG+LLGPSA GR+ +L VFP +S TVLDT+ANLGLLFFLFLVGLELDPK+L RTGKKALAIALAGI++PF LGIG SF LR TIS+GV E PFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALA+ALSG GRSPL+SLWVLLCG+ F++ CI V PP+F+WMAR CPEGEPVDEMYVCA LA+VLAAGFVTD+IGIHALFGAFVIG+LVPK+G FAGALVEKVEDLVSG+ LPLYFVSSGLKT+V TI G Q+WGLL +VI TAC GKI GT+ VSLL KMP ++A+ALG LMNTKGLVELIVLNIGKDRGVLND+TFA++VLMALFTTFITTP+V+AVYKP K+ + YKH T++R E ++QLR+L CFH +RNIPSLINLIEASRGT ++GGLRVYAMHLMELSERSS++LMVH+AR+NGLPFW+KV SDS Q+VVAFE F+ LSKVSI+PTTAISP+ATMHEDI A+ K V+MIILPFH+HQR+DG LETTR+EFR VNR+VL APCSVGI +DRGLGG+SHV+A NVDY +T LFFGGHDD EA+AYG MAEHPGISL+VVRF +D KV G +++D+++ + E R+ D++ L +LK + + + + +EE+IV A+T+E + +S+CNLFLVGR+PEG++ +L TD+PELGP+G+FLV PEFST ASVLVVQQY +S SLASL++E G++
Sbjct: 1 MASNATVKCPAPMKATSNGVFQGETPLDYALPLVILQICLVIVLTRTLAYLLRPLRQPRVVAEIIGGVLLGPSALGRNHKFLHTVFPPRSLTVLDTIANLGLLFFLFLVGLELDPKSLRRTGKKALAIALAGITLPFALGIGTSFALRATISKGVSEGPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAVALSGVGRSPLVSLWVLLCGSGFVLCCIFVAPPIFRWMARRCPEGEPVDEMYVCATLAVVLAAGFVTDSIGIHALFGAFVIGILVPKEGAFAGALVEKVEDLVSGIFLPLYFVSSGLKTNVATIHGAQAWGLLALVIFTACFGKIVGTIFVSLLSKMPLQQAVALGFLMNTKGLVELIVLNIGKDRGVLNDETFAVMVLMALFTTFITTPIVMAVYKP-AKMARSEYKHHTIQRKEASAQLRLLTCFHSSRNIPSLINLIEASRGTEKKGGLRVYAMHLMELSERSSAILMVHKARKNGLPFWSKVQDSDSNQVVVAFEAFRQLSKVSIRPTTAISPIATMHEDILAGAEKKGVSMIILPFHKHQRIDGHLETTRAEFRHVNRRVLRAAPCSVGIFVDRGLGGTSHVSASNVDYTITALFFGGHDDREAVAYGALMAEHPGISLVVVRFAVDPKVAGKSVNLDVNESSGPEARSDDEEFLSELKENVKEVRSVTFEEKIVRDGAETVEAVRAYSRCNLFLVGRMPEGQLVAALNNTTDSPELGPVGNFLVAPEFSTRASVLVVQQYRRELSEDSLASLEAEGSGEESN 799
BLAST of DCAR_006855 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VVM0 ((cation/H(+) antiporter 18-like {ECO:0000313|RefSeq:XP_009765985.1}))
HSP 1 Score: 1173.69 bits (3035), Expect = 0.000e+0
Identity = 586/804 (72.89%), Postives = 680/804 (84.58%), Query Frame = 0
Match: A0A1U7VVM0 ((cation/H(+) antiporter 18-like {ECO:0000313|RefSeq:XP_009765985.1}))
HSP 1 Score: 1173.69 bits (3035), Expect = 0.000e+0
Identity = 586/804 (72.89%), Postives = 680/804 (84.58%), Query Frame = 0
Query: 1 MASNGT-DCPHPMKATSNGVFQGDSPLDYALPLIILQICLVLVFTRFLAYLLKPMRQPR------GGILLGPSAFGRSKTYLDAVFPKKSHTVLDTVANLGLLFFLFLVGLELDPKALGRTGKKALAIALAGISVPFVLGIGVSFVLRGTISQGVDEAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSGRSPLISLWVLLCGAAFIVGCIIVVPPLFKWMARHCPEGEPVDEMYVCAILALVLAAGFVTDTIGIHALFGAFVIGVLVPKDGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTDVTTIKGLQSWGLLVMVIATACIGKIFGTVGVSLLCKMPFKEALALGILMNTKGLVELIVLNIGKDRGVLNDQTFAILVLMALFTTFITTPLVVAVYKPHKKVDKKAYKHRTVERSETNSQLRILACFHGARNIPSLINLIEASRGTGRRGGLRVYAMHLMELSERSSSMLMVHRARRNGLPFWNKVGSSDSTQIVVAFETFQHLSKVSIQPTTAISPMATMHEDICGSADTKKVAMIILPFHRHQRLDGLLETTRSEFRQVNRKVLERAPCSVGILIDRGLGGSSHVTARNVDYVMTVLFFGGHDDHEALAYGKRMAEHPGISLIVVRFVLDSKVTGGVISVDMSDFTNAEERAIDDQVLDDLKRTIS-DKKMKYEERIVNSAAQTIEVISEFSKCNLFLVGRIPEGEIARSLLTKTDTPELGPIGSFLVTPEFSTEASVLVVQQYHSNMSVHSLASLKSEDEGKDDESSDD 796
MA+N T CP PMKATSNGVFQGD+PLDYALPL I+QICLVLV TR LAYLL+P+RQPR GG+LLGPSA GR++ YL A+FP KS TVLDT+AN GLLFFLFLVGLELDPK+L RTGKKAL+IALAGISVPF LGIG SFVLR TISQGV++ PFL+FMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSG GRSPLISLWVLLCG F++ CI++ P +FKWMAR C +GEPVDE YVCA LA VLAAGFVTDTIGIHALFGAFV+GVLVPK+GPFAGALVEKVEDLVSGL LPLYFVSSGLKT+V TI+G QSWGLLV+VI TAC GKI GT+ VSLLCK+P +EA+ LG LMNTKGLVELIVLNIGKDRGVLNDQTFAI+VLMALFTTFITTP+V++VYKP K+ AYKHRT+ER T+ QLRIL CFH RNIP+++NLIE SRG +R GLRVYAMHLMELSERSS++LMVH+A++NGLPFWN + DS QIVVAFETFQHLSKVSI+PTTAISPM +MHEDI SA+ K+VAMIILPFH++ RLDG LETTR + R VNR+VL+ APCSVGIL+DRGLGG+SH+ + NVD+ +TVLFFGGHDD EALAYG R+AEHPGISL+VVRF +D +VTG + ++M+D + E R+ D++ L D+K S D +K+EER V A TIEVISE+++CNLFLVGR+PEG++ +L ++D PELG +G+ L +PEFST ASVLVVQQY S + SL+SLK E E D + + +
Sbjct: 1 MATNVTMKCPTPMKATSNGVFQGDNPLDYALPLAIVQICLVLVLTRVLAYLLRPLRQPRVIAEIVGGVLLGPSALGRNEKYLQAIFPPKSLTVLDTLANFGLLFFLFLVGLELDPKSLRRTGKKALSIALAGISVPFALGIGTSFVLRATISQGVNQGPFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGVGRSPLISLWVLLCGTGFVLLCILIAPRIFKWMARRCSDGEPVDEKYVCATLAAVLAAGFVTDTIGIHALFGAFVLGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACFGKIVGTIVVSLLCKLPVQEAVTLGFLMNTKGLVELIVLNIGKDRGVLNDQTFAIMVLMALFTTFITTPIVISVYKP-AKLAVTAYKHRTIERKNTSKQLRILTCFHSTRNIPTMLNLIEVSRGIEKREGLRVYAMHLMELSERSSAILMVHKAKKNGLPFWNTEQAQDSNQIVVAFETFQHLSKVSIRPTTAISPMNSMHEDIVTSAERKRVAMIILPFHKYPRLDGHLETTRGDLRHVNRRVLQHAPCSVGILVDRGLGGASHIPSSNVDFSITVLFFGGHDDREALAYGVRIAEHPGISLVVVRFTVDPEVTGSSVKIEMNDNSTPEARSEDEEYLADVKHKSSMDGSIKFEERTVKDARGTIEVISEYNRCNLFLVGRMPEGQLVLALDKRSDCPELGSVGNLLTSPEFSTTASVLVVQQYRSQLPRESLSSLKEEGESTDGDYNSE 803
BLAST of DCAR_006855 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4CB58 ((cation/H(+) antiporter 18-like {ECO:0000313|RefSeq:XP_016498457.1}))
HSP 1 Score: 1173.69 bits (3035), Expect = 0.000e+0
Identity = 586/804 (72.89%), Postives = 680/804 (84.58%), Query Frame = 0
Match: A0A1S4CB58 ((cation/H(+) antiporter 18-like {ECO:0000313|RefSeq:XP_016498457.1}))
HSP 1 Score: 1173.69 bits (3035), Expect = 0.000e+0
Identity = 586/804 (72.89%), Postives = 680/804 (84.58%), Query Frame = 0
Query: 1 MASNGT-DCPHPMKATSNGVFQGDSPLDYALPLIILQICLVLVFTRFLAYLLKPMRQPR------GGILLGPSAFGRSKTYLDAVFPKKSHTVLDTVANLGLLFFLFLVGLELDPKALGRTGKKALAIALAGISVPFVLGIGVSFVLRGTISQGVDEAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSGRSPLISLWVLLCGAAFIVGCIIVVPPLFKWMARHCPEGEPVDEMYVCAILALVLAAGFVTDTIGIHALFGAFVIGVLVPKDGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTDVTTIKGLQSWGLLVMVIATACIGKIFGTVGVSLLCKMPFKEALALGILMNTKGLVELIVLNIGKDRGVLNDQTFAILVLMALFTTFITTPLVVAVYKPHKKVDKKAYKHRTVERSETNSQLRILACFHGARNIPSLINLIEASRGTGRRGGLRVYAMHLMELSERSSSMLMVHRARRNGLPFWNKVGSSDSTQIVVAFETFQHLSKVSIQPTTAISPMATMHEDICGSADTKKVAMIILPFHRHQRLDGLLETTRSEFRQVNRKVLERAPCSVGILIDRGLGGSSHVTARNVDYVMTVLFFGGHDDHEALAYGKRMAEHPGISLIVVRFVLDSKVTGGVISVDMSDFTNAEERAIDDQVLDDLKRTIS-DKKMKYEERIVNSAAQTIEVISEFSKCNLFLVGRIPEGEIARSLLTKTDTPELGPIGSFLVTPEFSTEASVLVVQQYHSNMSVHSLASLKSEDEGKDDESSDD 796
MA+N T CP PMKATSNGVFQGD+PLDYALPL I+QICLVLV TR LAYLL+P+RQPR GG+LLGPSA GR++ YL A+FP KS TVLDT+AN GLLFFLFLVGLELDPK+L RTGKKAL+IALAGISVPF LGIG SFVLR TISQGV++ PFL+FMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSG GRSPLISLWVLLCG F++ CI++ P +FKWMAR C +GEPVDE YVCA LA VLAAGFVTDTIGIHALFGAFV+GVLVPK+GPFAGALVEKVEDLVSGL LPLYFVSSGLKT+V TI+G QSWGLLV+VI TAC GKI GT+ VSLLCK+P +EA+ LG LMNTKGLVELIVLNIGKDRGVLNDQTFAI+VLMALFTTFITTP+V++VYKP K+ AYKHRT+ER T+ QLRIL CFH RNIP+++NLIE SRG +R GLRVYAMHLMELSERSS++LMVH+A++NGLPFWN + DS QIVVAFETFQHLSKVSI+PTTAISPM +MHEDI SA+ K+VAMIILPFH++ RLDG LETTR + R VNR+VL+ APCSVGIL+DRGLGG+SH+ + NVD+ +TVLFFGGHDD EALAYG R+AEHPGISL+VVRF +D +VTG + ++M+D + E R+ D++ L D+K S D +K+EER V A TIEVISE+++CNLFLVGR+PEG++ +L ++D PELG +G+ L +PEFST ASVLVVQQY S + SL+SLK E E D + + +
Sbjct: 1 MATNVTMKCPTPMKATSNGVFQGDNPLDYALPLAIVQICLVLVLTRVLAYLLRPLRQPRVIAEIVGGVLLGPSALGRNEKYLQAIFPPKSLTVLDTLANFGLLFFLFLVGLELDPKSLRRTGKKALSIALAGISVPFALGIGTSFVLRATISQGVNQGPFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGVGRSPLISLWVLLCGTGFVLLCILIAPRIFKWMARRCSDGEPVDEKYVCATLAAVLAAGFVTDTIGIHALFGAFVLGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACFGKIVGTIVVSLLCKLPVQEAVTLGFLMNTKGLVELIVLNIGKDRGVLNDQTFAIMVLMALFTTFITTPIVISVYKP-AKLAVTAYKHRTIERKNTSKQLRILTCFHSTRNIPTMLNLIEVSRGIEKREGLRVYAMHLMELSERSSAILMVHKAKKNGLPFWNTEQAQDSNQIVVAFETFQHLSKVSIRPTTAISPMNSMHEDIVTSAERKRVAMIILPFHKYPRLDGHLETTRGDLRHVNRRVLQHAPCSVGILVDRGLGGASHIPSSNVDFSITVLFFGGHDDREALAYGVRIAEHPGISLVVVRFTVDPEVTGSSVKIEMNDNSTPEARSEDEEYLADVKHKSSMDGSIKFEERTVKDARGTIEVISEYNRCNLFLVGRMPEGQLVLALDKRSDCPELGSVGNLLTSPEFSTTASVLVVQQYRSQLPRESLSSLKEEGESTDGDYNSE 803
BLAST of DCAR_006855 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J4ZYF1 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1167.91 bits (3020), Expect = 0.000e+0
Identity = 586/804 (72.89%), Postives = 685/804 (85.20%), Query Frame = 0
Match: A0A5J4ZYF1 (Na_H_Exchanger domain-containing protein {ECO:0000259|Pfam:PF00999})
HSP 1 Score: 1167.91 bits (3020), Expect = 0.000e+0
Identity = 586/804 (72.89%), Postives = 685/804 (85.20%), Query Frame = 0
Query: 1 MASNGT--DCPHPMKATSNGVFQGDSPLDYALPLIILQICLVLVFTRFLAYLLKPMRQPR------GGILLGPSAFGRSKTYLDAVFPKKSHTVLDTVANLGLLFFLFLVGLELDPKALGRTGKKALAIALAGISVPFVLGIGVSFVLRGTISQGVDEAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSGRSPLISLWVLLCGAAFIVGCIIVVPPLFKWMARHCPEGEPVDEMYVCAILALVLAAGFVTDTIGIHALFGAFVIGVLVPKDGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTDVTTIKGLQSWGLLVMVIATACIGKIFGTVGVSLLCKMPFKEALALGILMNTKGLVELIVLNIGKDRGVLNDQTFAILVLMALFTTFITTPLVVAVYKPHKKVDKKAYKHRTVERSETNSQLRILACFHGARNIPSLINLIEASRGTGRRGGLRVYAMHLMELSERSSSMLMVHRARRNGLPFWNKVGSSDSTQIVVAFETFQHLSKVSIQPTTAISPMATMHEDICGSADTKKVAMIILPFHRHQRLDGLLETTRSEFRQVNRKVLERAPCSVGILIDRGLGGSSHVTARNVDYVMTVLFFGGHDDHEALAYGKRMAEHPGISLIVVRFVLDSKVTGGVISVDMSDFTNAEERAIDDQVLDDLKRTIS-DKKMKYEERIVNSAAQTIEVISEFSKCNLFLVGRIPEGEIARSLLTKTDTPELGPIGSFLVTPEFSTEASVLVVQQYHSNMSVHSLASLKSEDEGKDDESSD 795
MASN T CP PMKATSNGVFQGD+PLDYALPL ILQICLV+V TR LA +L+P+RQPR GGILLGPSA GR+++YL AVFP KS TVLDT+ANLGLLFFLFLVGLELDP++L RTGKKAL+IA+AGIS+PF LGIG SFVL GTIS+GV E PFLVFMGVALSITAFPVLARILAELKLLTTD+GRMA+SAAAVNDVAAWILLALAIALSG+G SPLISLWV LCG F++ CI ++PP+FKWMA+ CPEGEPVDEMYVCA LA VLAAGFVTD+IGIHALFGAFV+GVL+PK+GPFA ALVEKVEDLVSGL LPLYFVSSGLKT+V TI+GLQSWGLLV+VI TAC+GKI GTV VSL C+MPF+EALALG LMNTKGLVELIVLNIG+DRGVLNDQTFAI+VLMALFTTFITTPLVVAVYKP K++ YKHRT++R + N++LR+LACFH RNIP+LINLIEASRGT +R GL VYAMHLMEL+ERSS+++MVH+AR+NGLPFWNK SD QIVVAFE FQ LS VSI+P TAIS M++MHEDIC SA+ K+ +IILPFH+HQRLDG LETTR++ R VNR+VLE APCSVGIL+DRG GG++HV+A NV ++TVLFFGGHDDHEALAYG RMAEHPGISL+V+RF++D K G ++ +DM +++ A +++DD+ L + K IS D +KYEER+V S+A IEVI E + CNLF+VGR+PEG++ +L K+D PELGPIG L +PEFST ASVLVVQQY + +H+LASLK E+ +D SD
Sbjct: 1 MASNATTVKCPSPMKATSNGVFQGDNPLDYALPLAILQICLVVVLTRVLALVLRPLRQPRVIAEIVGGILLGPSALGRNQSYLHAVFPSKSLTVLDTLANLGLLFFLFLVGLELDPRSLRRTGKKALSIAIAGISIPFALGIGTSFVLHGTISKGVSEGPFLVFMGVALSITAFPVLARILAELKLLTTDIGRMALSAAAVNDVAAWILLALAIALSGTGHSPLISLWVFLCGCGFVICCIFIIPPIFKWMAQRCPEGEPVDEMYVCATLATVLAAGFVTDSIGIHALFGAFVVGVLIPKEGPFANALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGLQSWGLLVLVIVTACVGKIVGTVTVSLCCRMPFQEALALGFLMNTKGLVELIVLNIGRDRGVLNDQTFAIMVLMALFTTFITTPLVVAVYKPAKRMGTAEYKHRTIQRKDLNTRLRMLACFHSTRNIPTLINLIEASRGTEKRKGLCVYAMHLMELTERSSAIMMVHKARKNGLPFWNKGEKSDGNQIVVAFEAFQQLSHVSIRPMTAISAMSSMHEDICSSAERKRAGIIILPFHKHQRLDGQLETTRTDIRYVNRRVLEHAPCSVGILVDRGFGGTTHVSASNVKSIITVLFFGGHDDHEALAYGVRMAEHPGISLVVIRFLVDPKFVGEIVRLDMDNYS-AVAKSVDDEFLAEFKERISADSSIKYEERVVGSSAAAIEVIRERNLCNLFVVGRMPEGQLVAALNEKSDCPELGPIGGLLTSPEFSTTASVLVVQQYRRELPLHALASLKEEESPVEDYESD 803
BLAST of DCAR_006855 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4D9Z4 ((cation/H(+) antiporter 18-like {ECO:0000313|RefSeq:XP_016510029.1, ECO:0000313|RefSeq:XP_016510030.1}))
HSP 1 Score: 1167.91 bits (3020), Expect = 0.000e+0
Identity = 584/804 (72.64%), Postives = 675/804 (83.96%), Query Frame = 0
Match: A0A1S4D9Z4 ((cation/H(+) antiporter 18-like {ECO:0000313|RefSeq:XP_016510029.1, ECO:0000313|RefSeq:XP_016510030.1}))
HSP 1 Score: 1167.91 bits (3020), Expect = 0.000e+0
Identity = 584/804 (72.64%), Postives = 675/804 (83.96%), Query Frame = 0
Query: 1 MASNGT-DCPHPMKATSNGVFQGDSPLDYALPLIILQICLVLVFTRFLAYLLKPMRQPR------GGILLGPSAFGRSKTYLDAVFPKKSHTVLDTVANLGLLFFLFLVGLELDPKALGRTGKKALAIALAGISVPFVLGIGVSFVLRGTISQGVDEAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSGRSPLISLWVLLCGAAFIVGCIIVVPPLFKWMARHCPEGEPVDEMYVCAILALVLAAGFVTDTIGIHALFGAFVIGVLVPKDGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTDVTTIKGLQSWGLLVMVIATACIGKIFGTVGVSLLCKMPFKEALALGILMNTKGLVELIVLNIGKDRGVLNDQTFAILVLMALFTTFITTPLVVAVYKPHKKVDKKAYKHRTVERSETNSQLRILACFHGARNIPSLINLIEASRGTGRRGGLRVYAMHLMELSERSSSMLMVHRARRNGLPFWNKVGSSDSTQIVVAFETFQHLSKVSIQPTTAISPMATMHEDICGSADTKKVAMIILPFHRHQRLDGLLETTRSEFRQVNRKVLERAPCSVGILIDRGLGGSSHVTARNVDYVMTVLFFGGHDDHEALAYGKRMAEHPGISLIVVRFVLDSKVTGGVISVDMSDFTNAEERAIDDQVLDDLKRTIS-DKKMKYEERIVNSAAQTIEVISEFSKCNLFLVGRIPEGEIARSLLTKTDTPELGPIGSFLVTPEFSTEASVLVVQQYHSNMSVHSLASLKSEDEGKDDESSDD 796
MASN T CP PMKATSNGVFQGD+PLDYALPL I+QICLVLV TR LAYLL+P+RQPR GG+LLGPSA GR++ YL A+FP KS TVLDT+AN GLLFFLFLVGLELDPK+L RTGKKAL+IALAGISVPF LGIG S VLR TISQGV++ PFL+FMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSG GRSPLISLWVLLCG F++ CI++ P +FKWMAR C EGEPVDE YVCA LA VLAAGFVTDTIGIHALFGAFV+GVLVPK+GPFAGALVEKVEDLVSGL LPLYFVSSGLKT++ TI+G QSWGLLV+VI TAC GKI GT+ VSLLCK+P +EA+ LG LMNTKGLVELIVLNIGKDRGVLNDQTFAI+VLMALFTTFITTP+V++VYKP K+ AYKHRT+ER T+ QLRIL CFH RNIP+++NLIE SRG +R GLRVYAMHL ELSERSS++LMVH+A++NGLPFWN DS QIVVAFETFQHLSKVSI+PTTAISPM +MHEDI SA+ K+VAMIILPFH+H RLDG LETTR + R VNR+VL+ APCSVGIL+DRGLGG+SH+ + NVD+ +TVLFFGGHDD EALAYG R+AEHPGISL+VVRF +D +VTG + ++M+D + E R+ D++ L D+K S D +K+EER V A TIE I E+++CNLFLVGR+PEG++ +L ++D PELG +G+ L +PEFST ASVLVVQQY S + SL+SLK E E D + + +
Sbjct: 1 MASNVTVKCPTPMKATSNGVFQGDNPLDYALPLAIVQICLVLVLTRVLAYLLRPLRQPRVIAEIVGGVLLGPSALGRNEKYLQAIFPPKSLTVLDTLANFGLLFFLFLVGLELDPKSLRRTGKKALSIALAGISVPFALGIGTSIVLRATISQGVNQGPFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGVGRSPLISLWVLLCGTGFVLLCILIAPLIFKWMARRCSEGEPVDEKYVCATLAAVLAAGFVTDTIGIHALFGAFVLGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNIATIQGAQSWGLLVLVIVTACFGKIVGTIVVSLLCKLPVQEAVTLGFLMNTKGLVELIVLNIGKDRGVLNDQTFAIMVLMALFTTFITTPIVISVYKP-AKLAVTAYKHRTIERKNTSKQLRILTCFHSTRNIPTMLNLIEVSRGIEKREGLRVYAMHLTELSERSSAILMVHKAKKNGLPFWNTEQVQDSNQIVVAFETFQHLSKVSIRPTTAISPMNSMHEDIVTSAERKRVAMIILPFHKHPRLDGHLETTRGDLRHVNRRVLQHAPCSVGILVDRGLGGASHIPSSNVDFSITVLFFGGHDDREALAYGVRIAEHPGISLVVVRFTVDPEVTGSSVKIEMNDNSTPEARSEDEEYLADVKHKSSMDGSIKFEERTVKDARGTIEAIREYNRCNLFLVGRMPEGQLVLALDKRSDCPELGSLGNLLTSPEFSTTASVLVVQQYRSQLPRESLSSLKEEGESTDGDYNSE 803
BLAST of DCAR_006855 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A314KVS8 ((Cationh(+) antiporter 18 {ECO:0000313|EMBL:OIT32744.1}))
HSP 1 Score: 1167.53 bits (3019), Expect = 0.000e+0
Identity = 582/804 (72.39%), Postives = 678/804 (84.33%), Query Frame = 0
Match: A0A314KVS8 ((Cationh(+) antiporter 18 {ECO:0000313|EMBL:OIT32744.1}))
HSP 1 Score: 1167.53 bits (3019), Expect = 0.000e+0
Identity = 582/804 (72.39%), Postives = 678/804 (84.33%), Query Frame = 0
Query: 1 MASNGT-DCPHPMKATSNGVFQGDSPLDYALPLIILQICLVLVFTRFLAYLLKPMRQPR------GGILLGPSAFGRSKTYLDAVFPKKSHTVLDTVANLGLLFFLFLVGLELDPKALGRTGKKALAIALAGISVPFVLGIGVSFVLRGTISQGVDEAPFLVFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSGRSPLISLWVLLCGAAFIVGCIIVVPPLFKWMARHCPEGEPVDEMYVCAILALVLAAGFVTDTIGIHALFGAFVIGVLVPKDGPFAGALVEKVEDLVSGLLLPLYFVSSGLKTDVTTIKGLQSWGLLVMVIATACIGKIFGTVGVSLLCKMPFKEALALGILMNTKGLVELIVLNIGKDRGVLNDQTFAILVLMALFTTFITTPLVVAVYKPHKKVDKKAYKHRTVERSETNSQLRILACFHGARNIPSLINLIEASRGTGRRGGLRVYAMHLMELSERSSSMLMVHRARRNGLPFWNKVGSSDSTQIVVAFETFQHLSKVSIQPTTAISPMATMHEDICGSADTKKVAMIILPFHRHQRLDGLLETTRSEFRQVNRKVLERAPCSVGILIDRGLGGSSHVTARNVDYVMTVLFFGGHDDHEALAYGKRMAEHPGISLIVVRFVLDSKVTGGVISVDMSDFTNAEERAIDDQVLDDLK-RTISDKKMKYEERIVNSAAQTIEVISEFSKCNLFLVGRIPEGEIARSLLTKTDTPELGPIGSFLVTPEFSTEASVLVVQQYHSNMSVHSLASLKSEDEGKDDESSDD 796
MA+N T CP PMKATSNGVFQGD+PLDYALPL I+QICLVLV TR LAYLL+P+RQPR GG+LLGPSA GR++ YL A+FP KS TVLDT+AN GLLFFLFLVGLELDPK+L RTGKKAL+IALAGISVPF LGIG SFVLR TISQGV++ PFL+FMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSG GRSPLISLWVLLCG F++ CI++ P +FKWMAR C +G PVDE YVCA LA VLAAGFVTDTIGIHALFGAFV+GVLVPK+GPFAGALVEKVEDLVSGL LPLYFVSSGLKT+V TI+G QSWGLLV+VI TAC GKI GT+ VSLLCK+P +EA+ LG LMNTKGLVELIVLNIGKDRGVLNDQTFAI+VLMALFTTFITTP+V++VYKP K+ AYKHRT+ER T+ QLRIL CFH RNIP+++NLIE SRG +R GLRVYAMHLMELSERSS++LMVH+A++NGLPFWN DS QIVVAFETFQHLSKVSI+PTTAISPM +MHEDI SA+ K+VAMIILPFH+H RLDG LETTR + R VNR+VL+ APCSVGIL+DRGLGG+SH+ + NVD+ +TVLFFGGHDD EALAYG R+AEHPGISL+VVRF +D +VTG + ++M+D + E R+ D++ L D+K +++ D +K+EER V A TIE I E+++CNLFLVGR+PEG++ +L ++D PELG +G+ L +PEFST ASVLVVQQY S + SL+SLK E + D + + +
Sbjct: 1 MATNVTMKCPTPMKATSNGVFQGDNPLDYALPLAIVQICLVLVLTRVLAYLLRPLRQPRVIAEIVGGVLLGPSALGRNEKYLQAIFPPKSLTVLDTLANFGLLFFLFLVGLELDPKSLRRTGKKALSIALAGISVPFALGIGTSFVLRATISQGVNQGPFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGVGRSPLISLWVLLCGTGFVLLCILIAPRIFKWMARRCSDGGPVDEKYVCATLAAVLAAGFVTDTIGIHALFGAFVLGVLVPKEGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACFGKIVGTIVVSLLCKLPVQEAVTLGFLMNTKGLVELIVLNIGKDRGVLNDQTFAIMVLMALFTTFITTPIVISVYKP-AKLAVTAYKHRTIERKNTSKQLRILTCFHSTRNIPTMLNLIEVSRGIEKREGLRVYAMHLMELSERSSAILMVHKAKKNGLPFWNTEQVQDSNQIVVAFETFQHLSKVSIRPTTAISPMNSMHEDIVTSAERKRVAMIILPFHKHPRLDGHLETTRGDLRHVNRRVLQHAPCSVGILVDRGLGGASHIPSSNVDFSITVLFFGGHDDREALAYGVRIAEHPGISLVVVRFTVDPEVTGSSVKIEMNDNSTPEARSEDEEYLADVKHKSLVDGTIKFEERTVKDARGTIEAIREYNRCNLFLVGRMPEGQLVLALDKRSDCPELGSVGNLLTSPEFSTTASVLVVQQYRSQLPRESLSSLKEEGDSTDGDYNSE 803
| Match Name | Stats | Description |
|---|---|---|
| A0A4S4D3Q1 | E-Value: 0.000e+0, PID: 72.14 | Na_H_Exchanger domain-containing protein {ECO:0000... [more] |
| A0A6P6TRS6 | E-Value: 0.000e+0, PID: 72.38 | (cation/H(+) antiporter 18-like {ECO:0000313|RefSe... [more] |
| A0A5B7AK09 | E-Value: 0.000e+0, PID: 74.34 | (Putative Cation/H+ exchanger 18 {ECO:0000313|EMBL... [more] |
| A0A4S4EF16 | E-Value: 0.000e+0, PID: 74.34 | Na_H_Exchanger domain-containing protein {ECO:0000... [more] |
| A0A068UUK7 | E-Value: 0.000e+0, PID: 72.13 | Na_H_Exchanger domain-containing protein {ECO:0000... [more] |
| A0A1U7VVM0 | E-Value: 0.000e+0, PID: 72.89 | (cation/H(+) antiporter 18-like {ECO:0000313|RefSe... [more] |
| A0A1S4CB58 | E-Value: 0.000e+0, PID: 72.89 | (cation/H(+) antiporter 18-like {ECO:0000313|RefSe... [more] |
| A0A5J4ZYF1 | E-Value: 0.000e+0, PID: 72.89 | Na_H_Exchanger domain-containing protein {ECO:0000... [more] |
| A0A1S4D9Z4 | E-Value: 0.000e+0, PID: 72.64 | (cation/H(+) antiporter 18-like {ECO:0000313|RefSe... [more] |
| A0A314KVS8 | E-Value: 0.000e+0, PID: 72.39 | (Cationh(+) antiporter 18 {ECO:0000313|EMBL:OIT327... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |