Resource Type:
Polypeptide
Name:
DCAR_004541
Identifier:
DCAR_004541.mRNA-protein
Sequence:
MSIFLNVQPGMMTYNGLESCIINNQSYENDSGTSRGDGCVTDSHDEDGSS
CSSSNNASGSFSSHWTSMMKDEKGREELELSDSPRKLCVKEKQAYKIEKL
DVEIMKQKFAKLLLGDDITGGRKGVSSALALSKAITNLAALVFGELWKLE
PLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARAD
IHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWW
LPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFI
REALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHR
ALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLL
NQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAF
SILSRIGDVLQEEVLSNPNSPAATFNFPGVNHVNQRMPSQHMAGFASPTL
SSIANTSPGTINTKLALSKAITNLAALVFGELWKLEPLSEERKKKWRQEM
DWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSM
LIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDT
ERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNY
YSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALA
WKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARF
PKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEV
LSNPNSPAATFNFPGVNHVNQRMPSQHHVRHSLIDQMNIVDGRFREPNTV
KYSKYESWDDKHKTSLVTGTPGQSRVWCLGREACGSLSTLSPESSP*
Sequence Length:
947
Sequence Checksum:
03274fa569c0ac81450d63a0aa548af1
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_004541, derives from mRNA, DCAR_004541. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_004541 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_004541 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PHI5 ((Rop guanine nucleotide exchange factor like {ECO:0000313|EMBL:PSR91337.1}))
HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0
Identity = 333/481 (69.23%), Postives = 397/481 (82.54%), Query Frame = 0
HSP 2 Score: 573.933 bits (1478), Expect = 0.000e+0
Identity = 298/483 (61.70%), Postives = 355/483 (73.50%), Query Frame = 0
Match: A0A2R6PHI5 ((Rop guanine nucleotide exchange factor like {ECO:0000313|EMBL:PSR91337.1}))
HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0
Identity = 333/481 (69.23%), Postives = 397/481 (82.54%), Query Frame = 0
Query: 1 MSIFLNVQPGMMTYNGLESCIINNQSYENDSGTSRGDGCVTDSHDEDGSSCSSSNNASGSFSSHWTSMMKDEKGREELELSDSPRKLCVKEKQAYKIEKLDVEIMKQKFAKLLLGDDITGGRKGVSSALALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN 481
+S+ + Q + TYNGLESCI+N+ SYEN+SGTS+GDGCV+DS DED SSCSSSNN GSFSSHWT M +DE+G +E E+++SP+ VKEK Y ++ DVE MK++FAKLLLG+DITGGRKG+S+ALALS ITNLAA VFGELWKLEPLSE+ K KWR+EMDW+LSPTNYM+ELVPAKQH NG+TMEIMTPKAR D+H+NLPALQKLDSMLIETL+SMV TEFWY EGGSRAEGR RQS RWWLP P+VP +GLS+TERKKLLNQGKVVHQVFKAAKSIN++VLLEM VP I++ALPK SGKA+LGE+LY ++AES + EE++ +LNLKSEH ALE INRLEAA LAWK R+ E+ + +SP+ TS SF+KD S+MDKME+LL+Q E L +++K R+P L Q+FLDV KIQYGKDVG +ILEAYSRVL NLAF ILSRIGD+LQE++LSNPNSP FPGVN
Sbjct: 16 ISLDFDEQERITTYNGLESCILNSHSYENESGTSKGDGCVSDSLDEDASSCSSSNNGFGSFSSHWTMMKRDEQGLDEWEVTESPKHFYVKEKPVYSVQFSDVETMKERFAKLLLGEDITGGRKGLSTALALSNGITNLAASVFGELWKLEPLSEDTKSKWRREMDWLLSPTNYMVELVPAKQHDANGRTMEIMTPKARGDVHINLPALQKLDSMLIETLESMVSTEFWYAEGGSRAEGR----RQSRRWWLPLPQVPTSGLSETERKKLLNQGKVVHQVFKAAKSINESVLLEMPVPTIIKDALPK---------SGKASLGEELYRILSAESISAEEMIDSLNLKSEHSALETINRLEAAVLAWKDRIAEQSSGKSPVRTSWSFIKDPISEMDKMEFLLDQAEDLARQLKTRYPNLAQTFLDVVKIQYGKDVGHSILEAYSRVLRNLAFKILSRIGDILQEDILSNPNSPVPPCCFPGVN 483
HSP 2 Score: 573.933 bits (1478), Expect = 0.000e+0
Identity = 298/483 (61.70%), Postives = 355/483 (73.50%), Query Frame = 0
Query: 471 PAATFNFPGVNHVNQRMPSQHMAGFASPTLSSIANTSPGTINTKLALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVNHV-NQRMPS-QHHVRHSLIDQMNIVDGRFREPNTVKYSKYESWD-----DKHKTSLVTGTPGQSRVWCLGREACGSLSTLSPESSP 946
P + F V + +R FA L ++T LALS ITNLAA VFGELWKLEPLSE+ K KWR+EMDW+LSPTNYM+ELVPAKQH NG+TMEIMTPKAR D+H+NLPALQKLDSMLIETL+SMV TEFWY EGGSRAEGR RQS RWWLP P+VP +GLS+TERKKLLNQGKVVHQVFKAAKSIN++VLLEM VP I++ALPK SGKA+LGE+LY ++AES + EE++ +LNLKSEH ALE INRLEAA LAWK R+ E+ + +SP+ TS SF+KD S+MDKME+LL+Q E L +++K R+P L Q+FLDV KIQYGKDVG +ILEAYSRVL NLAF ILSRIGD+LQE++LSNPNSP FPGVN N P H VRHSLIDQMN VD +F Y++ + D + KTS VT TP +SRVWC+GR+AC +SP++SP
Sbjct: 108 PVYSVQFSDVETMKER--------FAKLLLGEDITGGRKGLSTALALSNGITNLAASVFGELWKLEPLSEDTKSKWRREMDWLLSPTNYMVELVPAKQHDANGRTMEIMTPKARGDVHINLPALQKLDSMLIETLESMVSTEFWYAEGGSRAEGR----RQSRRWWLPLPQVPTSGLSETERKKLLNQGKVVHQVFKAAKSINESVLLEMPVPTIIKDALPK---------SGKASLGEELYRILSAESISAEEMIDSLNLKSEHSALETINRLEAAVLAWKDRIAEQSSGKSPVRTSWSFIKDPISEMDKMEFLLDQAEDLARQLKTRYPNLAQTFLDVVKIQYGKDVGHSILEAYSRVLRNLAFKILSRIGDILQEDILSNPNSPVPPCCFPGVNLTGNSDSPVLGHPVRHSLIDQMNKVDEQFYN----SYARNNASDLEISCAEPKTSSVTATPSRSRVWCIGRDAC---RDISPQNSP 562
BLAST of DCAR_004541 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AWU5 ((Putative rop guanine nucleotide exchange factor 14 {ECO:0000313|EMBL:MPA60468.1}))
HSP 1 Score: 672.159 bits (1733), Expect = 0.000e+0
Identity = 337/481 (70.06%), Postives = 403/481 (83.78%), Query Frame = 0
HSP 2 Score: 587.8 bits (1514), Expect = 0.000e+0
Identity = 291/438 (66.44%), Postives = 352/438 (80.37%), Query Frame = 0
Match: A0A5B7AWU5 ((Putative rop guanine nucleotide exchange factor 14 {ECO:0000313|EMBL:MPA60468.1}))
HSP 1 Score: 672.159 bits (1733), Expect = 0.000e+0
Identity = 337/481 (70.06%), Postives = 403/481 (83.78%), Query Frame = 0
Query: 1 MSIFLNVQPGMMTYNGLESCIINNQSYENDSGTSRGDGCVTDSHDEDGSSCSSSNNASGSFSSHWTSMMKDEKGREELELSDSPRKLCVKEKQAYKIEKLDVEIMKQKFAKLLLGDDITGGRKGVSSALALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN 481
+SI + Q +MTYNGLESCI+N +SY N+SGTSRGDGCVTDS DED SSCSSSNNA GSFSSHW M KDE+G +E E+S SP+ VKEK Y I+ DVE MK++FAKLLLG+D+TGG KG+S+ALALS AITNLAA VFGELWKLEPL EERK KWR+EMDW+LSPTN+M+ELVPAKQ+ NG+++EIMTPKARADIHMNLPALQKLDSMLIETLDSMV TEFWY EGGSRAEGRS S+RQS RWWLPSP+VP +GLSDTERKKLL QGK+V QV KAAKSIN+NVLLEM VP I++ALPK SG+A+LGE++Y +TAES ++EE+L++LNLKSEH LE INRLEAA AWK ++ E+ + +SP+ TS +F+KD S++ K ++LL + E+L+Q++K R+P LPQ+FLDVTKIQYGKDVG++ILEAYSRVL NLAFSILSRIGD+LQEEVLSNPNSP T +FPG+N
Sbjct: 17 ISIDFDEQERIMTYNGLESCILNIESYGNESGTSRGDGCVTDSFDEDDSSCSSSNNAFGSFSSHWMMMKKDEEGMDEWEVSKSPQHFYVKEKPTYTIQLSDVETMKERFAKLLLGEDVTGGHKGISTALALSNAITNLAASVFGELWKLEPLPEERKSKWRREMDWLLSPTNHMVELVPAKQNGANGRSLEIMTPKARADIHMNLPALQKLDSMLIETLDSMVNTEFWYAEGGSRAEGRSRSARQSKRWWLPSPQVPNSGLSDTERKKLLYQGKMVRQVLKAAKSINENVLLEMPVPTIIKDALPK---------SGRASLGEEVYRILTAESNSIEEMLNSLNLKSEHSVLEAINRLEAAVFAWKEKITEQASGKSPVRTSWTFIKDPISELYKTQFLLERAEALLQQLKTRYPNLPQTFLDVTKIQYGKDVGRSILEAYSRVLGNLAFSILSRIGDILQEEVLSNPNSPVPTCSFPGIN 488
HSP 2 Score: 587.8 bits (1514), Expect = 0.000e+0
Identity = 291/438 (66.44%), Postives = 352/438 (80.37%), Query Frame = 0
Query: 511 INTKLALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN--HVNQRMPSQHHVRHSLIDQMNIVDGRFREPNTVKYSKYESWDDKHKTSLVTGTPGQSRVWCLGREACGSLSTLSPESSP 946
I+T LALS AITNLAA VFGELWKLEPL EERK KWR+EMDW+LSPTN+M+ELVPAKQ+ NG+++EIMTPKARADIHMNLPALQKLDSMLIETLDSMV TEFWY EGGSRAEGRS S+RQS RWWLPSP+VP +GLSDTERKKLL QGK+V QV KAAKSIN+NVLLEM VP I++ALPK SG+A+LGE++Y +TAES ++EE+L++LNLKSEH LE INRLEAA AWK ++ E+ + +SP+ TS +F+KD S++ K ++LL + E+L+Q++K R+P LPQ+FLDVTKIQYGKDVG++ILEAYSRVL NLAFSILSRIGD+LQEEVLSNPNSP T +FPG+N V+ +RHSLID MN V+G+F + N S E + KTS +T TP +SRVWC+GREAC S+LSP +SP
Sbjct: 141 ISTALALSNAITNLAASVFGELWKLEPLPEERKSKWRREMDWLLSPTNHMVELVPAKQNGANGRSLEIMTPKARADIHMNLPALQKLDSMLIETLDSMVNTEFWYAEGGSRAEGRSRSARQSKRWWLPSPQVPNSGLSDTERKKLLYQGKMVRQVLKAAKSINENVLLEMPVPTIIKDALPK---------SGRASLGEEVYRILTAESNSIEEMLNSLNLKSEHSVLEAINRLEAAVFAWKEKITEQASGKSPVRTSWTFIKDPISELYKTQFLLERAEALLQQLKTRYPNLPQTFLDVTKIQYGKDVGRSILEAYSRVLGNLAFSILSRIGDILQEEVLSNPNSPVPTCSFPGINLTRVSDSPVLGQRIRHSLIDHMNKVNGQFCDSNAGNASDLELSCGEAKTSWLTPTPSRSRVWCIGREAC---SSLSPRNSP 566
BLAST of DCAR_004541 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061G8A5 ((RHO guanyl-nucleotide exchange factor 14 isoform 1 {ECO:0000313|EMBL:EOY25392.1}))
HSP 1 Score: 667.922 bits (1722), Expect = 0.000e+0
Identity = 336/481 (69.85%), Postives = 398/481 (82.74%), Query Frame = 0
HSP 2 Score: 570.081 bits (1468), Expect = 0.000e+0
Identity = 287/438 (65.53%), Postives = 345/438 (78.77%), Query Frame = 0
Match: A0A061G8A5 ((RHO guanyl-nucleotide exchange factor 14 isoform 1 {ECO:0000313|EMBL:EOY25392.1}))
HSP 1 Score: 667.922 bits (1722), Expect = 0.000e+0
Identity = 336/481 (69.85%), Postives = 398/481 (82.74%), Query Frame = 0
Query: 1 MSIFLNVQPGMMTYNGLESCIINNQSYENDSGTSRGDGCVTDSHDEDGSSCSSSNNASGSFSSHWTSMMKDEKGREELELSDSPRKLCVKEKQAYKIEKLDVEIMKQKFAKLLLGDDITGGRKGVSSALALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN 481
+S+ + Q +MTYNGLESCI+NN+SYEN+S TSRGDGC +DS D+D SSCSSS +A GSFSS W +M +DE+G +E ELS+SP+K KEK AY I+ D+E MK+KF+KLLLG+DITGGRKGVS+ALALS AITNLAA VFGELWKLEPL+EERK KWR+EMDW+LSPTNYM+ELVPAKQ NG+TMEIMTPKARADIHMNLPALQKLDSMLIETL+SMV TEFWY E GSRAEGR+ S+++S RWWLP P+VP GLSDTERKKL +GKVVHQVFKAAKSIN+NVLLEM VP IR+ALPK S KANL +DLY +T ES +VE++ +LNLKSEH ALE INRLEAA AWK R+ E+ + +SP+ TS SF+KD S+MDKME LL++ E+LVQ+IK+ +P LPQ+FLD TKIQYGKDVG +ILEAYSRVL NLAFSI+SRIG++LQE+ LSNPNSP AT FPG+N
Sbjct: 84 ISLDFDEQDRIMTYNGLESCILNNESYENESRTSRGDGCASDSLDDDFSSCSSSKDAFGSFSSKWMTMKRDEQGSDEWELSESPKKFYAKEKPAYAIQFSDIETMKEKFSKLLLGEDITGGRKGVSTALALSNAITNLAASVFGELWKLEPLAEERKNKWRREMDWLLSPTNYMVELVPAKQSGANGRTMEIMTPKARADIHMNLPALQKLDSMLIETLESMVNTEFWYAEVGSRAEGRNKSAKESKRWWLPLPQVPKTGLSDTERKKLQCKGKVVHQVFKAAKSINENVLLEMPVPSIIRDALPK---------SAKANLSDDLYKVLTMESSSVEDMFISLNLKSEHNALEPINRLEAAVFAWKERIAEQASGKSPVRTSWSFIKDPISEMDKMELLLDRAEALVQQIKSTYPNLPQTFLDATKIQYGKDVGHSILEAYSRVLRNLAFSIMSRIGEILQEDTLSNPNSPVATLCFPGMN 555
HSP 2 Score: 570.081 bits (1468), Expect = 0.000e+0
Identity = 287/438 (65.53%), Postives = 345/438 (78.77%), Query Frame = 0
Query: 511 INTKLALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN-HVNQRMPSQH-HVRHSLIDQMNIVDGRFREPNTVKYSKYESWDDKHKTSLVTGTPGQSRVWCLGREACGSLSTLSPESSP 946
++T LALS AITNLAA VFGELWKLEPL+EERK KWR+EMDW+LSPTNYM+ELVPAKQ NG+TMEIMTPKARADIHMNLPALQKLDSMLIETL+SMV TEFWY E GSRAEGR+ S+++S RWWLP P+VP GLSDTERKKL +GKVVHQVFKAAKSIN+NVLLEM VP IR+ALPK S KANL +DLY +T ES +VE++ +LNLKSEH ALE INRLEAA AWK R+ E+ + +SP+ TS SF+KD S+MDKME LL++ E+LVQ+IK+ +P LPQ+FLD TKIQYGKDVG +ILEAYSRVL NLAFSI+SRIG++LQE+ LSNPNSP AT FPG+N N + P+ R SLIDQMN DG++ + ++ YS+ E ++ + S V TP +SRVWC+G+EAC +SP +SP
Sbjct: 208 VSTALALSNAITNLAASVFGELWKLEPLAEERKNKWRREMDWLLSPTNYMVELVPAKQSGANGRTMEIMTPKARADIHMNLPALQKLDSMLIETLESMVNTEFWYAEVGSRAEGRNKSAKESKRWWLPLPQVPKTGLSDTERKKLQCKGKVVHQVFKAAKSINENVLLEMPVPSIIRDALPK---------SAKANLSDDLYKVLTMESSSVEDMFISLNLKSEHNALEPINRLEAAVFAWKERIAEQASGKSPVRTSWSFIKDPISEMDKMELLLDRAEALVQQIKSTYPNLPQTFLDATKIQYGKDVGHSILEAYSRVLRNLAFSIMSRIGEILQEDTLSNPNSPVATLCFPGMNMKGNLQTPACGPRARQSLIDQMNRADGKYCDSDSSSYSEREVSYNEARRSCVNATPSRSRVWCIGKEACIG---VSPRNSP 633
BLAST of DCAR_004541 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7TFE1 ((Uncharacterized protein {ECO:0000313|EMBL:CBI29214.3}))
HSP 1 Score: 667.152 bits (1720), Expect = 0.000e+0
Identity = 327/484 (67.56%), Postives = 392/484 (80.99%), Query Frame = 0
HSP 2 Score: 550.821 bits (1418), Expect = 1.269e-179
Identity = 276/421 (65.56%), Postives = 330/421 (78.38%), Query Frame = 0
Match: D7TFE1 ((Uncharacterized protein {ECO:0000313|EMBL:CBI29214.3}))
HSP 1 Score: 667.152 bits (1720), Expect = 0.000e+0
Identity = 327/484 (67.56%), Postives = 392/484 (80.99%), Query Frame = 0
Query: 1 MSIFLNVQPGMMTYNGLESCIINNQSYENDSGTSRGDGCVTDSHDEDGSSCSSSNNASGSFSSHWTSM--MKDEKGREELELSDSPRKLCVKEKQAYKIEKLDVEIMKQKFAKLLLGDDITGGRKGVSSALALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFN-FPGVN 481
+S+ L+ Q +MTYNGLE+CI+N SYEN+S TSRGDGC TDS DED +SCSSS +A GSFSS W +M KDE G +E E+ +SP+ VKEK Y + DVE+MK++F+KLLLG+DITGG+KG++SALALS AITNLA VFGELWKLEPLSEERK KW++EMDW+LSPTNYM+ELVPAKQ NG+T+EIMTPKARADIHMNLPALQKLDSMLIETLDSMV TEFWY EGGSRAEGR+ S QS RWWLPSP+VP GLSD ERKKLL+Q KVVHQVFKAA++IN+NVLLEM VP IR+AL K SGKANLGE+LY +TAES + EE+L +LNLKSEH ALE INRLEAA AWK R+ E+ + +SP+ TS SF+KD +++DKME +L + E+L+Q+++ R+P LPQSFLDV KIQYGKD+G +ILEAYSRVL NLA SIL R+ D+LQE+V SNPNSP AT + FPG+N
Sbjct: 17 LSLDLDEQERIMTYNGLENCILNGHSYENESHTSRGDGCATDSLDEDDTSCSSSKDAFGSFSSKWLTMNMKKDEHGLDEWEVPESPQHFYVKEKPGYSVRFSDVEVMKERFSKLLLGEDITGGKKGLTSALALSNAITNLAVSVFGELWKLEPLSEERKVKWQREMDWLLSPTNYMVELVPAKQSGANGRTLEIMTPKARADIHMNLPALQKLDSMLIETLDSMVDTEFWYAEGGSRAEGRTRSMSQSKRWWLPSPQVPTTGLSDPERKKLLHQAKVVHQVFKAARAINENVLLEMPVPTLIRDALAK---------SGKANLGEELYRVLTAESSSAEEMLSSLNLKSEHSALEAINRLEAAVFAWKERITEQVSGKSPVRTSWSFIKDPTTELDKMELILFRAEALLQQLRTRYPNLPQSFLDVAKIQYGKDIGHSILEAYSRVLGNLASSILCRMRDILQEDVFSNPNSPIATTSCFPGIN 491
HSP 2 Score: 550.821 bits (1418), Expect = 1.269e-179
Identity = 276/421 (65.56%), Postives = 330/421 (78.38%), Query Frame = 0
Query: 511 INTKLALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFN-FPGVN--HVNQRMPSQHHVRHSLIDQMNIVDGRFREPNTVKYSKYE-SWDDKHKTSLVTGTPGQSRVW 927
+ + LALS AITNLA VFGELWKLEPLSEERK KW++EMDW+LSPTNYM+ELVPAKQ NG+T+EIMTPKARADIHMNLPALQKLDSMLIETLDSMV TEFWY EGGSRAEGR+ S QS RWWLPSP+VP GLSD ERKKLL+Q KVVHQVFKAA++IN+NVLLEM VP IR+AL K SGKANLGE+LY +TAES + EE+L +LNLKSEH ALE INRLEAA AWK R+ E+ + +SP+ TS SF+KD +++DKME +L + E+L+Q+++ R+P LPQSFLDV KIQYGKD+G +ILEAYSRVL NLA SIL R+ D+LQE+V SNPNSP AT + FPG+N + + +RHSLIDQMN+VDGRFR+PN E S+ D ++S V TP +SR +
Sbjct: 143 LTSALALSNAITNLAVSVFGELWKLEPLSEERKVKWQREMDWLLSPTNYMVELVPAKQSGANGRTLEIMTPKARADIHMNLPALQKLDSMLIETLDSMVDTEFWYAEGGSRAEGRTRSMSQSKRWWLPSPQVPTTGLSDPERKKLLHQAKVVHQVFKAARAINENVLLEMPVPTLIRDALAK---------SGKANLGEELYRVLTAESSSAEEMLSSLNLKSEHSALEAINRLEAAVFAWKERITEQVSGKSPVRTSWSFIKDPTTELDKMELILFRAEALLQQLRTRYPNLPQSFLDVAKIQYGKDIGHSILEAYSRVLGNLASSILCRMRDILQEDVFSNPNSPIATTSCFPGINLTGMTETPTPSLRIRHSLIDQMNMVDGRFRDPNAGASPDCEASYSDSRRSS-VMATPSRSRKY 553
BLAST of DCAR_004541 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061GEC5 ((RHO guanyl-nucleotide exchange factor 14 isoform 2 {ECO:0000313|EMBL:EOY25394.1}))
HSP 1 Score: 666.766 bits (1719), Expect = 0.000e+0
Identity = 336/481 (69.85%), Postives = 398/481 (82.74%), Query Frame = 0
HSP 2 Score: 569.311 bits (1466), Expect = 0.000e+0
Identity = 287/438 (65.53%), Postives = 345/438 (78.77%), Query Frame = 0
Match: A0A061GEC5 ((RHO guanyl-nucleotide exchange factor 14 isoform 2 {ECO:0000313|EMBL:EOY25394.1}))
HSP 1 Score: 666.766 bits (1719), Expect = 0.000e+0
Identity = 336/481 (69.85%), Postives = 398/481 (82.74%), Query Frame = 0
Query: 1 MSIFLNVQPGMMTYNGLESCIINNQSYENDSGTSRGDGCVTDSHDEDGSSCSSSNNASGSFSSHWTSMMKDEKGREELELSDSPRKLCVKEKQAYKIEKLDVEIMKQKFAKLLLGDDITGGRKGVSSALALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN 481
+S+ + Q +MTYNGLESCI+NN+SYEN+S TSRGDGC +DS D+D SSCSSS +A GSFSS W +M +DE+G +E ELS+SP+K KEK AY I+ D+E MK+KF+KLLLG+DITGGRKGVS+ALALS AITNLAA VFGELWKLEPL+EERK KWR+EMDW+LSPTNYM+ELVPAKQ NG+TMEIMTPKARADIHMNLPALQKLDSMLIETL+SMV TEFWY E GSRAEGR+ S+++S RWWLP P+VP GLSDTERKKL +GKVVHQVFKAAKSIN+NVLLEM VP IR+ALPK S KANL +DLY +T ES +VE++ +LNLKSEH ALE INRLEAA AWK R+ E+ + +SP+ TS SF+KD S+MDKME LL++ E+LVQ+IK+ +P LPQ+FLD TKIQYGKDVG +ILEAYSRVL NLAFSI+SRIG++LQE+ LSNPNSP AT FPG+N
Sbjct: 17 ISLDFDEQDRIMTYNGLESCILNNESYENESRTSRGDGCASDSLDDDFSSCSSSKDAFGSFSSKWMTMKRDEQGSDEWELSESPKKFYAKEKPAYAIQFSDIETMKEKFSKLLLGEDITGGRKGVSTALALSNAITNLAASVFGELWKLEPLAEERKNKWRREMDWLLSPTNYMVELVPAKQSGANGRTMEIMTPKARADIHMNLPALQKLDSMLIETLESMVNTEFWYAEVGSRAEGRNKSAKESKRWWLPLPQVPKTGLSDTERKKLQCKGKVVHQVFKAAKSINENVLLEMPVPSIIRDALPK---------SAKANLSDDLYKVLTMESSSVEDMFISLNLKSEHNALEPINRLEAAVFAWKERIAEQASGKSPVRTSWSFIKDPISEMDKMELLLDRAEALVQQIKSTYPNLPQTFLDATKIQYGKDVGHSILEAYSRVLRNLAFSIMSRIGEILQEDTLSNPNSPVATLCFPGMN 488
HSP 2 Score: 569.311 bits (1466), Expect = 0.000e+0
Identity = 287/438 (65.53%), Postives = 345/438 (78.77%), Query Frame = 0
Query: 511 INTKLALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN-HVNQRMPSQH-HVRHSLIDQMNIVDGRFREPNTVKYSKYESWDDKHKTSLVTGTPGQSRVWCLGREACGSLSTLSPESSP 946
++T LALS AITNLAA VFGELWKLEPL+EERK KWR+EMDW+LSPTNYM+ELVPAKQ NG+TMEIMTPKARADIHMNLPALQKLDSMLIETL+SMV TEFWY E GSRAEGR+ S+++S RWWLP P+VP GLSDTERKKL +GKVVHQVFKAAKSIN+NVLLEM VP IR+ALPK S KANL +DLY +T ES +VE++ +LNLKSEH ALE INRLEAA AWK R+ E+ + +SP+ TS SF+KD S+MDKME LL++ E+LVQ+IK+ +P LPQ+FLD TKIQYGKDVG +ILEAYSRVL NLAFSI+SRIG++LQE+ LSNPNSP AT FPG+N N + P+ R SLIDQMN DG++ + ++ YS+ E ++ + S V TP +SRVWC+G+EAC +SP +SP
Sbjct: 141 VSTALALSNAITNLAASVFGELWKLEPLAEERKNKWRREMDWLLSPTNYMVELVPAKQSGANGRTMEIMTPKARADIHMNLPALQKLDSMLIETLESMVNTEFWYAEVGSRAEGRNKSAKESKRWWLPLPQVPKTGLSDTERKKLQCKGKVVHQVFKAAKSINENVLLEMPVPSIIRDALPK---------SAKANLSDDLYKVLTMESSSVEDMFISLNLKSEHNALEPINRLEAAVFAWKERIAEQASGKSPVRTSWSFIKDPISEMDKMELLLDRAEALVQQIKSTYPNLPQTFLDATKIQYGKDVGHSILEAYSRVLRNLAFSIMSRIGEILQEDTLSNPNSPVATLCFPGMNMKGNLQTPACGPRARQSLIDQMNRADGKYCDSDSSSYSEREVSYNEARRSCVNATPSRSRVWCIGKEACIG---VSPRNSP 566
BLAST of DCAR_004541 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AV64 ((Putative rop guanine nucleotide exchange factor 14 {ECO:0000313|EMBL:MPA60469.1}))
HSP 1 Score: 666.381 bits (1718), Expect = 0.000e+0
Identity = 331/481 (68.81%), Postives = 399/481 (82.95%), Query Frame = 0
HSP 2 Score: 580.096 bits (1494), Expect = 0.000e+0
Identity = 292/470 (62.13%), Postives = 351/470 (74.68%), Query Frame = 0
Match: A0A5B7AV64 ((Putative rop guanine nucleotide exchange factor 14 {ECO:0000313|EMBL:MPA60469.1}))
HSP 1 Score: 666.381 bits (1718), Expect = 0.000e+0
Identity = 331/481 (68.81%), Postives = 399/481 (82.95%), Query Frame = 0
Query: 1 MSIFLNVQPGMMTYNGLESCIINNQSYENDSGTSRGDGCVTDSHDEDGSSCSSSNNASGSFSSHWTSMMKDEKGREELELSDSPRKLCVKEKQAYKIEKLDVEIMKQKFAKLLLGDDITGGRKGVSSALALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN 481
+S+ + Q +MTYNGL+SCI N+ SYEN+SGTSRGDGC TDS DED SSCSSSNNA GSFSSHW M +DE+ ++ E+S+SP+ VKEK AY I+ DVE MK++FAKLLLG+DITGG KG+S+ALALS AITNLAA +FGELWKLEPL EERK KWR+EMDW+LSPTN+M+ELVPAKQ+ NG+T+EIMTP+ RADIH+NLPALQKLDSMLIETLDSMV TEFWY EGGSRAEGRS S+RQS RWWLPSP+VP +GLS+T RKKLL QGKVVHQV KAAKSIN+NVLLEM VP I++ALPK SGKA+LGE+LY +TAES ++EE+L++LN+KSEH LE INRLEAA AW+ ++ E+ + SP+ TS SF+KD S++DK E+LL + E+L+Q +K R+P LPQ+FLDVTKIQYGKDVG +ILEAYSR+L NLAFSILSRIG++LQE+VLSNPNSP A +FPG N
Sbjct: 16 ISLDFDEQERVMTYNGLQSCIFNSHSYENESGTSRGDGCATDSLDEDDSSCSSSNNAFGSFSSHWMIMKRDEEAMDDWEVSESPQHFHVKEKPAYTIQFSDVETMKERFAKLLLGEDITGGCKGISTALALSNAITNLAASIFGELWKLEPLPEERKSKWRREMDWLLSPTNHMVELVPAKQNGANGRTLEIMTPRTRADIHLNLPALQKLDSMLIETLDSMVNTEFWYAEGGSRAEGRSRSARQSKRWWLPSPQVPISGLSETRRKKLLYQGKVVHQVLKAAKSINENVLLEMPVPTIIKDALPK---------SGKASLGEELYRILTAESNSIEEILNSLNMKSEHSVLEAINRLEAAVFAWREKITEQASGNSPVRTSWSFIKDPISELDKTEFLLERAEALLQHLKTRYPNLPQTFLDVTKIQYGKDVGHSILEAYSRILRNLAFSILSRIGEILQEDVLSNPNSPVAICSFPGTN 487
HSP 2 Score: 580.096 bits (1494), Expect = 0.000e+0
Identity = 292/470 (62.13%), Postives = 351/470 (74.68%), Query Frame = 0
Query: 471 PAATFNFPGVNHVNQRMPSQHMAGFASPTLSSIANTSPGTINTKLALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN--HVNQRMPSQHHVRHSLIDQMNIVDGRFREPNTVKYSKYESWDDKHKTSLVTGTPGQSRVWCLGREACGSLS 938
PA T F V + +R FA L I+T LALS AITNLAA +FGELWKLEPL EERK KWR+EMDW+LSPTN+M+ELVPAKQ+ NG+T+EIMTP+ RADIH+NLPALQKLDSMLIETLDSMV TEFWY EGGSRAEGRS S+RQS RWWLPSP+VP +GLS+T RKKLL QGKVVHQV KAAKSIN+NVLLEM VP I++ALPK SGKA+LGE+LY +TAES ++EE+L++LN+KSEH LE INRLEAA AW+ ++ E+ + SP+ TS SF+KD S++DK E+LL + E+L+Q +K R+P LPQ+FLDVTKIQYGKDVG +ILEAYSR+L NLAFSILSRIG++LQE+VLSNPNSP A +FPG N + H+RHSLIDQMN VD +F E N S E + KTS TP +SR WC+G+EAC S+S
Sbjct: 108 PAYTIQFSDVETMKER--------FAKLLLGEDITGGCKGISTALALSNAITNLAASIFGELWKLEPLPEERKSKWRREMDWLLSPTNHMVELVPAKQNGANGRTLEIMTPRTRADIHLNLPALQKLDSMLIETLDSMVNTEFWYAEGGSRAEGRSRSARQSKRWWLPSPQVPISGLSETRRKKLLYQGKVVHQVLKAAKSINENVLLEMPVPTIIKDALPK---------SGKASLGEELYRILTAESNSIEEILNSLNMKSEHSVLEAINRLEAAVFAWREKITEQASGNSPVRTSWSFIKDPISELDKTEFLLERAEALLQHLKTRYPNLPQTFLDVTKIQYGKDVGHSILEAYSRILRNLAFSILSRIGEILQEDVLSNPNSPVAICSFPGTNLTRIVDSPILGEHIRHSLIDQMNRVDRQFCELNASIPSDLELSCAEPKTSSAAVTPSRSRAWCIGKEACSSVS 560
BLAST of DCAR_004541 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6R4J5 (PRONE domain-containing protein {ECO:0000259|PROSITE:PS51334})
HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0
Identity = 334/483 (69.15%), Postives = 396/483 (81.99%), Query Frame = 0
HSP 2 Score: 567.385 bits (1461), Expect = 0.000e+0
Identity = 287/434 (66.13%), Postives = 338/434 (77.88%), Query Frame = 0
Match: A0A5N6R4J5 (PRONE domain-containing protein {ECO:0000259|PROSITE:PS51334})
HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0
Identity = 334/483 (69.15%), Postives = 396/483 (81.99%), Query Frame = 0
Query: 1 MSIFLNVQPGMMTYNGLESCIINNQSYENDSGTSRGDGCVTDSHDEDGSSCSSSNNASGSFSSHWTSMMKDEKGREELELSDSPRKLCVKEKQAYKIEKLDVEIMKQKFAKLLLGDDITGGRKGVSSALALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVNHV 483
+SI + Q +MTYNGLESCI+NNQSYEN+S TS+GD CVTDS D+ GSSCSSS +A GSFSS W +M +DE+ +E ELS+SP+ VKEK +Y I+ DVE MK+KFAKLLLG+D+TGG KG ++ALALS ITNLAA VFGELWKLEPL EE K KWR+EMDW+LSPTNYM+ELVPAKQ+ NG+T+EIMTPKARADIHMNLPALQKLDSMLIETLDSMV TEFWY EGGSRAEGR+NS RQS RWWLPSP VP GLSDTERKKLL+QG+VVHQVFKAAKSIN+NVLLEM VP I++ALPK SGKA+LGE+LY + AES + +E+L++LNLK EHRALEVINRLEAA AWK ++ E + +SP+ TS SF+KDS S+MDKME LL++ E+L+ +K R+P LP +FL+VTKIQYGKDVG +ILEAYSRVL NLA+SILSRI D+L+E+ LSNPNSP A F G+NH
Sbjct: 17 ISIDFDEQERIMTYNGLESCILNNQSYENESRTSKGDECVTDSLDDGGSSCSSSKDAFGSFSSKWLTMKRDEQSYDEWELSESPQHFYVKEKPSYAIQFADVEAMKEKFAKLLLGEDVTGGCKGQTTALALSNGITNLAATVFGELWKLEPLPEESKSKWRKEMDWLLSPTNYMVELVPAKQNGANGRTLEIMTPKARADIHMNLPALQKLDSMLIETLDSMVNTEFWYAEGGSRAEGRNNSGRQSKRWWLPSPHVPKTGLSDTERKKLLHQGRVVHQVFKAAKSINENVLLEMPVPAIIKDALPK---------SGKASLGEELY-KLFAESSSSDEILNSLNLKFEHRALEVINRLEAAIFAWKVKVTEHVSGKSPVRTSWSFIKDSMSEMDKMELLLDRAEALLHHLKIRYPNLPHTFLNVTKIQYGKDVGHSILEAYSRVLGNLAYSILSRIRDILEEDGLSNPNSPVAMPYFSGINHC 489
HSP 2 Score: 567.385 bits (1461), Expect = 0.000e+0
Identity = 287/434 (66.13%), Postives = 338/434 (77.88%), Query Frame = 0
Query: 513 TKLALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVNHVNQRMPSQHHVRHSLIDQMNIVDGRFREPNTVKYSKYESWDDKHKTSLVTGTPGQSRVWCLGREACGSLSTLSPESSP 946
T LALS ITNLAA VFGELWKLEPL EE K KWR+EMDW+LSPTNYM+ELVPAKQ+ NG+T+EIMTPKARADIHMNLPALQKLDSMLIETLDSMV TEFWY EGGSRAEGR+NS RQS RWWLPSP VP GLSDTERKKLL+QG+VVHQVFKAAKSIN+NVLLEM VP I++ALPK SGKA+LGE+LY + AES + +E+L++LNLK EHRALEVINRLEAA AWK ++ E + +SP+ TS SF+KDS S+MDKME LL++ E+L+ +K R+P LP +FL+VTKIQYGKDVG +ILEAYSRVL NLA+SILSRI D+L+E+ LSNPNSP A F G+NH + VRHSLIDQMN V G + + N+ + ES K S V TP +R+WC+ RE C S +SP+SSP
Sbjct: 143 TALALSNGITNLAATVFGELWKLEPLPEESKSKWRKEMDWLLSPTNYMVELVPAKQNGANGRTLEIMTPKARADIHMNLPALQKLDSMLIETLDSMVNTEFWYAEGGSRAEGRNNSGRQSKRWWLPSPHVPKTGLSDTERKKLLHQGRVVHQVFKAAKSINENVLLEMPVPAIIKDALPK---------SGKASLGEELY-KLFAESSSSDEILNSLNLKFEHRALEVINRLEAAIFAWKVKVTEHVSGKSPVRTSWSFIKDSMSEMDKMELLLDRAEALLHHLKIRYPNLPHTFLNVTKIQYGKDVGHSILEAYSRVLGNLAYSILSRIRDILEEDGLSNPNSPVAMPYFSGINHC-ETSAVDVDVRHSLIDQMNKVHGHYCDSNSSSTCELESSFSDAKASSVATTPSWNRLWCIDREVCVS---VSPKSSP 562
BLAST of DCAR_004541 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438IZA5 ((Rop guanine nucleotide exchange factor 14 {ECO:0000313|EMBL:RVX02037.1}))
HSP 1 Score: 663.3 bits (1710), Expect = 0.000e+0
Identity = 327/490 (66.73%), Postives = 390/490 (79.59%), Query Frame = 0
HSP 2 Score: 580.867 bits (1496), Expect = 0.000e+0
Identity = 293/457 (64.11%), Postives = 351/457 (76.81%), Query Frame = 0
Match: A0A438IZA5 ((Rop guanine nucleotide exchange factor 14 {ECO:0000313|EMBL:RVX02037.1}))
HSP 1 Score: 663.3 bits (1710), Expect = 0.000e+0
Identity = 327/490 (66.73%), Postives = 390/490 (79.59%), Query Frame = 0
Query: 12 MTYNGLESCIINNQSYENDSGTSRGDGCVTDSHDEDGSSCSSSNNASGSFSSHWTSM--MKDEKGREELELSDSPRKLCVKEKQAYKIEKLDVEIMKQKFAKLLLGDDITGGRKGVSSALALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQY----------------LNYY-SGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFN-FPGVN 481
MTYNGLE+CI+N SYEN+S TSRGDGC TDS DED +SCSSS +A GSFSS W +M KDE G +E E+ +SP+ VKEK Y + DVE+MK++F+KLLLG+DITGG+KG++SALALS AITNLA VFGELWKLEPLSEERK KW++EMDW+LSPTNYM+ELVPAKQ NG+T+EIMTPKARADIHMNLPALQKLDSMLIETLDSMV TEFWY EGGSRAEGR+ S QS RWWLPSP+VP GLSD ERKKLL+Q KVVHQVFKAA++IN+NVLLEM VP IR+AL KAS + L + SGKANLGE+LY +TAES + EE+L +LNLKSEH ALE INRLEAA AWK R+ E+ + +SP+ TS SF+KD +++DKME +L + E+L+Q+++ R+P LPQSFLDV KIQYGKD+G +ILEAYSRVL NLA SIL R+ D+LQE+V SNPNSP AT + FPG+N
Sbjct: 1 MTYNGLENCILNGHSYENESHTSRGDGCATDSLDEDDTSCSSSKDAFGSFSSKWLTMNMKKDEHGLDEWEVPESPQHFYVKEKPGYSVRFSDVEVMKERFSKLLLGEDITGGKKGLTSALALSNAITNLAVSVFGELWKLEPLSEERKVKWQREMDWLLSPTNYMVELVPAKQSGANGRTLEIMTPKARADIHMNLPALQKLDSMLIETLDSMVDTEFWYAEGGSRAEGRTRSMSQSKRWWLPSPQVPTTGLSDPERKKLLHQAKVVHQVFKAARAINENVLLEMPVPTLIRDALAKASKLFDLFPSNQSSCLKTLEVLKFRSSGKANLGEELYRVLTAESSSAEEMLSSLNLKSEHSALEAINRLEAAVFAWKERITEQVSGKSPVRTSWSFIKDPTTELDKMELILFRAEALLQQLRTRYPNLPQSFLDVAKIQYGKDIGHSILEAYSRVLGNLASSILCRMRDILQEDVFSNPNSPIATTSCFPGIN 490
HSP 2 Score: 580.867 bits (1496), Expect = 0.000e+0
Identity = 293/457 (64.11%), Postives = 351/457 (76.81%), Query Frame = 0
Query: 511 INTKLALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQY----------------LNYY-SGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFN-FPGVN--HVNQRMPSQHHVRHSLIDQMNIVDGRFREPNTVKYSKYE-SWDDKHKTSLVTGTPGQSRVWCLGREACGSLSTLSPESSP 946
+ + LALS AITNLA VFGELWKLEPLSEERK KW++EMDW+LSPTNYM+ELVPAKQ NG+T+EIMTPKARADIHMNLPALQKLDSMLIETLDSMV TEFWY EGGSRAEGR+ S QS RWWLPSP+VP GLSD ERKKLL+Q KVVHQVFKAA++IN+NVLLEM VP IR+AL KAS + L + SGKANLGE+LY +TAES + EE+L +LNLKSEH ALE INRLEAA AWK R+ E+ + +SP+ TS SF+KD +++DKME +L + E+L+Q+++ R+P LPQSFLDV KIQYGKD+G +ILEAYSRVL NLA SIL R+ D+LQE+V SNPNSP AT + FPG+N + + +RHSLIDQMN+VDGRFR+PN E S+ D ++S V TP +SRVWC+GREAC S+LSP +SP
Sbjct: 116 LTSALALSNAITNLAVSVFGELWKLEPLSEERKVKWQREMDWLLSPTNYMVELVPAKQSGANGRTLEIMTPKARADIHMNLPALQKLDSMLIETLDSMVDTEFWYAEGGSRAEGRTRSMSQSKRWWLPSPQVPTTGLSDPERKKLLHQAKVVHQVFKAARAINENVLLEMPVPTLIRDALAKASKLFDLFPSNQSSCLKTLEVLKFRSSGKANLGEELYRVLTAESSSAEEMLSSLNLKSEHSALEAINRLEAAVFAWKERITEQVSGKSPVRTSWSFIKDPTTELDKMELILFRAEALLQQLRTRYPNLPQSFLDVAKIQYGKDIGHSILEAYSRVLGNLASSILCRMRDILQEDVFSNPNSPIATTSCFPGINLTGMTETPTPSLRIRHSLIDQMNMVDGRFRDPNAGASPDCEASYSDSRRSS-VMATPSRSRVWCIGREAC---SSLSPRNSP 568
BLAST of DCAR_004541 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1BLQ0 ((rop guanine nucleotide exchange factor 14 isoform X2 {ECO:0000313|RefSeq:XP_021300013.1}))
HSP 1 Score: 661.759 bits (1706), Expect = 0.000e+0
Identity = 333/472 (70.55%), Postives = 393/472 (83.26%), Query Frame = 0
HSP 2 Score: 567.385 bits (1461), Expect = 0.000e+0
Identity = 287/438 (65.53%), Postives = 346/438 (79.00%), Query Frame = 0
Match: A0A6J1BLQ0 ((rop guanine nucleotide exchange factor 14 isoform X2 {ECO:0000313|RefSeq:XP_021300013.1}))
HSP 1 Score: 661.759 bits (1706), Expect = 0.000e+0
Identity = 333/472 (70.55%), Postives = 393/472 (83.26%), Query Frame = 0
Query: 10 GMMTYNGLESCIINNQSYENDSGTSRGDGCVTDSHDEDGSSCSSSNNASGSFSSHWTSMMKDEKGREELELSDSPRKLCVKEKQAYKIEKLDVEIMKQKFAKLLLGDDITGGRKGVSSALALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN 481
G+MTYNGLESCI+NN+SYEN+S TSRGDGC +DS D+D SSCSSS +A GSFSS W +M +DE+G +E ELS+SP+K K K AY I+ D+E MK+KF+KLLLG+DITGGRKGVS+ALALS AITNLAA VFGELWKLEPL+EERK KWR+EMDW+LSPTNYM+ELVPAKQ NG+TMEIMTPKARADIHMNLPALQKLDSMLIETL+SMV TEFWY E GSRAEGR+ S+++S RWWLP P+VP GLSDTERKKL +GKVVHQVFKAAKSIN+NVLLEM VP IR+ALPK S KANL +DL+ +T ES +VE++ +LNLKSEH ALE INRLEAA AWK R+ E+ + +SP+ TS SF+KD S+MDKME L++ E+LVQ+IK+ +P LPQ+FLD TKIQYGKDVG +ILEAYSRVL NLAFSI+SRIG++LQE+ LSNPNSPAAT FPG+N
Sbjct: 19 GIMTYNGLESCILNNESYENESRTSRGDGCASDSLDDDFSSCSSSKDAFGSFSSKWMTMKRDEQGSDEWELSESPKKFYAKGKPAYAIQFSDIEAMKEKFSKLLLGEDITGGRKGVSTALALSNAITNLAASVFGELWKLEPLAEERKNKWRREMDWLLSPTNYMVELVPAKQSGANGRTMEIMTPKARADIHMNLPALQKLDSMLIETLESMVNTEFWYAEVGSRAEGRNKSAKESKRWWLPLPQVPKTGLSDTERKKLQCKGKVVHQVFKAAKSINENVLLEMPVPSIIRDALPK---------SAKANLSDDLHKVLTMESSSVEDMFISLNLKSEHNALEAINRLEAAIFAWKDRIAEQASGKSPVRTSWSFIKDPISEMDKMELQLHRAEALVQQIKSTYPNLPQTFLDATKIQYGKDVGHSILEAYSRVLRNLAFSIMSRIGEILQEDTLSNPNSPAATLCFPGMN 481
HSP 2 Score: 567.385 bits (1461), Expect = 0.000e+0
Identity = 287/438 (65.53%), Postives = 346/438 (79.00%), Query Frame = 0
Query: 511 INTKLALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN-HVNQRMPSQH-HVRHSLIDQMNIVDGRFREPNTVKYSKYESWDDKHKTSLVTGTPGQSRVWCLGREACGSLSTLSPESSP 946
++T LALS AITNLAA VFGELWKLEPL+EERK KWR+EMDW+LSPTNYM+ELVPAKQ NG+TMEIMTPKARADIHMNLPALQKLDSMLIETL+SMV TEFWY E GSRAEGR+ S+++S RWWLP P+VP GLSDTERKKL +GKVVHQVFKAAKSIN+NVLLEM VP IR+ALPK S KANL +DL+ +T ES +VE++ +LNLKSEH ALE INRLEAA AWK R+ E+ + +SP+ TS SF+KD S+MDKME L++ E+LVQ+IK+ +P LPQ+FLD TKIQYGKDVG +ILEAYSRVL NLAFSI+SRIG++LQE+ LSNPNSPAAT FPG+N N + P+ R SLIDQMN DG++ + ++ YS+ E ++ +TS V TP +SRVWC+G+EAC +SP +SP
Sbjct: 134 VSTALALSNAITNLAASVFGELWKLEPLAEERKNKWRREMDWLLSPTNYMVELVPAKQSGANGRTMEIMTPKARADIHMNLPALQKLDSMLIETLESMVNTEFWYAEVGSRAEGRNKSAKESKRWWLPLPQVPKTGLSDTERKKLQCKGKVVHQVFKAAKSINENVLLEMPVPSIIRDALPK---------SAKANLSDDLHKVLTMESSSVEDMFISLNLKSEHNALEAINRLEAAIFAWKDRIAEQASGKSPVRTSWSFIKDPISEMDKMELQLHRAEALVQQIKSTYPNLPQTFLDATKIQYGKDVGHSILEAYSRVLRNLAFSIMSRIGEILQEDTLSNPNSPAATLCFPGMNMKGNLQTPTCGPRARQSLIDQMNRADGKYCDSDSSSYSEREVSYNEARTSSVNATPSRSRVWCIGKEACIG---VSPRNSP 559
BLAST of DCAR_004541 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1BNZ4 ((rop guanine nucleotide exchange factor 14 isoform X1 {ECO:0000313|RefSeq:XP_021300004.1}))
HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0
Identity = 334/481 (69.44%), Postives = 397/481 (82.54%), Query Frame = 0
HSP 2 Score: 567.77 bits (1462), Expect = 0.000e+0
Identity = 287/438 (65.53%), Postives = 346/438 (79.00%), Query Frame = 0
Match: A0A6J1BNZ4 ((rop guanine nucleotide exchange factor 14 isoform X1 {ECO:0000313|RefSeq:XP_021300004.1}))
HSP 1 Score: 661.374 bits (1705), Expect = 0.000e+0
Identity = 334/481 (69.44%), Postives = 397/481 (82.54%), Query Frame = 0
Query: 1 MSIFLNVQPGMMTYNGLESCIINNQSYENDSGTSRGDGCVTDSHDEDGSSCSSSNNASGSFSSHWTSMMKDEKGREELELSDSPRKLCVKEKQAYKIEKLDVEIMKQKFAKLLLGDDITGGRKGVSSALALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN 481
+S+ + Q +MTYNGLESCI+NN+SYEN+S TSRGDGC +DS D+D SSCSSS +A GSFSS W +M +DE+G +E ELS+SP+K K K AY I+ D+E MK+KF+KLLLG+DITGGRKGVS+ALALS AITNLAA VFGELWKLEPL+EERK KWR+EMDW+LSPTNYM+ELVPAKQ NG+TMEIMTPKARADIHMNLPALQKLDSMLIETL+SMV TEFWY E GSRAEGR+ S+++S RWWLP P+VP GLSDTERKKL +GKVVHQVFKAAKSIN+NVLLEM VP IR+ALPK S KANL +DL+ +T ES +VE++ +LNLKSEH ALE INRLEAA AWK R+ E+ + +SP+ TS SF+KD S+MDKME L++ E+LVQ+IK+ +P LPQ+FLD TKIQYGKDVG +ILEAYSRVL NLAFSI+SRIG++LQE+ LSNPNSPAAT FPG+N
Sbjct: 17 ISLDFDEQDRIMTYNGLESCILNNESYENESRTSRGDGCASDSLDDDFSSCSSSKDAFGSFSSKWMTMKRDEQGSDEWELSESPKKFYAKGKPAYAIQFSDIEAMKEKFSKLLLGEDITGGRKGVSTALALSNAITNLAASVFGELWKLEPLAEERKNKWRREMDWLLSPTNYMVELVPAKQSGANGRTMEIMTPKARADIHMNLPALQKLDSMLIETLESMVNTEFWYAEVGSRAEGRNKSAKESKRWWLPLPQVPKTGLSDTERKKLQCKGKVVHQVFKAAKSINENVLLEMPVPSIIRDALPK---------SAKANLSDDLHKVLTMESSSVEDMFISLNLKSEHNALEAINRLEAAIFAWKDRIAEQASGKSPVRTSWSFIKDPISEMDKMELQLHRAEALVQQIKSTYPNLPQTFLDATKIQYGKDVGHSILEAYSRVLRNLAFSIMSRIGEILQEDTLSNPNSPAATLCFPGMN 488
HSP 2 Score: 567.77 bits (1462), Expect = 0.000e+0
Identity = 287/438 (65.53%), Postives = 346/438 (79.00%), Query Frame = 0
Query: 511 INTKLALSKAITNLAALVFGELWKLEPLSEERKKKWRQEMDWILSPTNYMIELVPAKQHSINGQTMEIMTPKARADIHMNLPALQKLDSMLIETLDSMVGTEFWYVEGGSRAEGRSNSSRQSNRWWLPSPKVPAAGLSDTERKKLLNQGKVVHQVFKAAKSINKNVLLEMSVPDFIREALPKASNQYLNYYSGKANLGEDLYSNMTAESPTVEEVLHALNLKSEHRALEVINRLEAAALAWKHRMLEKRNYESPIHTSLSFLKDSESDMDKMEYLLNQTESLVQEIKARFPKLPQSFLDVTKIQYGKDVGQAILEAYSRVLANLAFSILSRIGDVLQEEVLSNPNSPAATFNFPGVN-HVNQRMPSQH-HVRHSLIDQMNIVDGRFREPNTVKYSKYESWDDKHKTSLVTGTPGQSRVWCLGREACGSLSTLSPESSP 946
++T LALS AITNLAA VFGELWKLEPL+EERK KWR+EMDW+LSPTNYM+ELVPAKQ NG+TMEIMTPKARADIHMNLPALQKLDSMLIETL+SMV TEFWY E GSRAEGR+ S+++S RWWLP P+VP GLSDTERKKL +GKVVHQVFKAAKSIN+NVLLEM VP IR+ALPK S KANL +DL+ +T ES +VE++ +LNLKSEH ALE INRLEAA AWK R+ E+ + +SP+ TS SF+KD S+MDKME L++ E+LVQ+IK+ +P LPQ+FLD TKIQYGKDVG +ILEAYSRVL NLAFSI+SRIG++LQE+ LSNPNSPAAT FPG+N N + P+ R SLIDQMN DG++ + ++ YS+ E ++ +TS V TP +SRVWC+G+EAC +SP +SP
Sbjct: 141 VSTALALSNAITNLAASVFGELWKLEPLAEERKNKWRREMDWLLSPTNYMVELVPAKQSGANGRTMEIMTPKARADIHMNLPALQKLDSMLIETLESMVNTEFWYAEVGSRAEGRNKSAKESKRWWLPLPQVPKTGLSDTERKKLQCKGKVVHQVFKAAKSINENVLLEMPVPSIIRDALPK---------SAKANLSDDLHKVLTMESSSVEDMFISLNLKSEHNALEAINRLEAAIFAWKDRIAEQASGKSPVRTSWSFIKDPISEMDKMELQLHRAEALVQQIKSTYPNLPQTFLDATKIQYGKDVGHSILEAYSRVLRNLAFSIMSRIGEILQEDTLSNPNSPAATLCFPGMNMKGNLQTPTCGPRARQSLIDQMNRADGKYCDSDSSSYSEREVSYNEARTSSVNATPSRSRVWCIGKEACIG---VSPRNSP 566
| Match Name | Stats | Description |
|---|---|---|
| A0A2R6PHI5 | E-Value: 0.000e+0, PID: 69.23 | (Rop guanine nucleotide exchange factor like {ECO:... [more] |
| A0A5B7AWU5 | E-Value: 0.000e+0, PID: 70.06 | (Putative rop guanine nucleotide exchange factor 1... [more] |
| A0A061G8A5 | E-Value: 0.000e+0, PID: 69.85 | (RHO guanyl-nucleotide exchange factor 14 isoform ... [more] |
| D7TFE1 | E-Value: 1.269e-179, PID: 67.56 | (Uncharacterized protein {ECO:0000313|EMBL:CBI2921... [more] |
| A0A061GEC5 | E-Value: 0.000e+0, PID: 69.85 | (RHO guanyl-nucleotide exchange factor 14 isoform ... [more] |
| A0A5B7AV64 | E-Value: 0.000e+0, PID: 68.81 | (Putative rop guanine nucleotide exchange factor 1... [more] |
| A0A5N6R4J5 | E-Value: 0.000e+0, PID: 69.15 | PRONE domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A438IZA5 | E-Value: 0.000e+0, PID: 66.73 | (Rop guanine nucleotide exchange factor 14 {ECO:00... [more] |
| A0A6J1BLQ0 | E-Value: 0.000e+0, PID: 70.55 | (rop guanine nucleotide exchange factor 14 isoform... [more] |
| A0A6J1BNZ4 | E-Value: 0.000e+0, PID: 69.44 | (rop guanine nucleotide exchange factor 14 isoform... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |