Resource Type:
Polypeptide
Name:
DCAR_001540
Identifier:
DCAR_001540.mRNA-protein
Sequence:
MAGQVAFNQSPAPSEDFEIVYGDFKVASQAQCSPLIDPSTIKLRHRLGRG
PFGDVWLATLHQTAEDYEEYHEVAVKMLHHVKEDSIRTVLDKLAELFFKS
RGLKGVCWMYGTSIISGKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRH
GIDLAQGIREMHSKEIMVLNLKPCNFLLNENNQSILGDLGIAYVLMGIPL
PSSDLTRRLGTPNYMAPEQWEPGTRGPISYETDSWGFACSIVEMLTGTQP
WCGMSIDNIYKTVVEKQEKPFIPEGLPSELENVILGCFEYDFRSRPLMSD
ILNAFKSSQNAISSDERGIGLGSNAILDRSATSGYTEWFLSKDYLQVGDM
VRSRKLSNSCKPENMDVPEGSIVGLERDTDRRGFVLVRVHAIHDPVRVHA
STLERVTYGLAAGDWVRLKNVDKKHSPVGILHFVHRDGAVGVGLIGVNTL
WKGSYSDLEMAETYCVGQFVRVKSNVYSPRFEWPQKRGAEWVTGRICQIL
PNGCLVVKFPGRLSFGDESSNFLADPAEVEVVSFKNCPGMVKKYQHLEDF
HWAVRPLLIALGLFTAMKLGFIVGNKVGGSKVKKDQKLISQEDSRMHMDG
KNAIWVPAKMDGQNAGWIPPNVANIIFRDGVSTAST*
Sequence Length:
637
Sequence Checksum:
731fece0cc88346308c6a6b3f7d26269
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_001540, derives from mRNA, DCAR_001540. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_001540 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_001540 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZUM7 ((Putative E3 ubiquitin-protein ligase KEG {ECO:0000313|EMBL:MPA47206.1}) (2.3.2.27 {ECO:0000313|EMBL:MPA47206.1}) (2.7.11.1 {ECO:0000313|EMBL:MPA47206.1}))
HSP 1 Score: 967.607 bits (2500), Expect = 0.000e+0
Identity = 466/639 (72.93%), Postives = 532/639 (83.26%), Query Frame = 0
Match: A0A5B6ZUM7 ((Putative E3 ubiquitin-protein ligase KEG {ECO:0000313|EMBL:MPA47206.1}) (2.3.2.27 {ECO:0000313|EMBL:MPA47206.1}) (2.7.11.1 {ECO:0000313|EMBL:MPA47206.1}))
HSP 1 Score: 967.607 bits (2500), Expect = 0.000e+0
Identity = 466/639 (72.93%), Postives = 532/639 (83.26%), Query Frame = 0
Query: 1 MAGQVAFNQSPAPSEDFEIVYGDF---KVASQAQCSPLIDPSTIKLRHRLGRGPFGDVWLATLHQTAEDYEEYHEVAVKMLHHVKEDSIRTVLDKLAELFFKSRGLKGVCWMYGTSIISGKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRHGIDLAQGIREMHSKEIMVLNLKPCNFLLNENNQSILGDLGIAYVLMGIPLPSSDLTRRLGTPNYMAPEQWEPGTRGPISYETDSWGFACSIVEMLTGTQPWCGMSIDNIYKTVVEKQEKPFIPEGLPSELENVILGCFEYDFRSRPLMSDILNAFKSSQNAISSDERGIGLGSNAILDRSATSGYTEWFLSKDYLQVGDMVRSRKLSNSCKPENMDVPEGSIVGLERDTDRRGFVLVRVHAIHDPVRVHASTLERVTYGLAAGDWVRLKNVDKKHSPVGILHFVHRDGAVGVGLIGVNTLWKGSYSDLEMAETYCVGQFVRVKSNVYSPRFEWPQKRGAEWVTGRICQILPNGCLVVKFPGRLSFGDESSNFLADPAEVEVVSFKNCPGMVKKYQHLEDFHWAVRPLLIALGLFTAMKLGFIVGNKVGGSKVKKDQKLISQEDSRMHMDGKNAIWVPAKMDGQNAGWIPPNVANIIFRDGVSTAST 636
MAGQ+ N+ P S DFE+V D VAS Q SP IDP+TIKLRHR+GRGPFGDVWLAT HQT EDYEEY+EVAVKMLH +KED+IR VLDK ++F K +GL+G+CW++G SIISGK+CIVMKFYEGS+GDKMARLKGGKLSL D+ R+GIDLA+GI E+HSKEI+VLNLKP NFLLNEN+Q++LGDLGI +VL+G LPSS + RRLGTPNYMAPEQW+P RGPISYETDSWGF CSI+EMLTG QPWCG S+D IY +VV+KQEKP +P GLP +ENVI+GCFEYDFRSRPLM+DIL+AFKSSQNA+ D GLGS I D+ + SGYTEWFLSKD+LQVGDMVRSRK NSCKPENMDVPEG++VGLE DTD+ GFVLVRVH IHDP+RVH STLERVT GLAAGDWVRLK DKKHSPVGILH V+RDG+V VG IGV T WKG+ S+ +MAE+YC+GQFVR+KS V+SPRFEWP+KRG EW TGRI QILPN CLVVKFPGRL+FGDE S+FLADPAEVEVVSF CPGMVKKYQHLEDFHWAVRPL+IALGLFTAMKLGF VG KVG SKVKK Q + D + HMDG++A N W+PP VANIIFR+GV T +T
Sbjct: 1 MAGQLVANR-PTTSFDFELVESDLLSTVVASPNQISPWIDPATIKLRHRIGRGPFGDVWLATHHQTTEDYEEYNEVAVKMLHPIKEDNIRAVLDKFNDMFSKCQGLEGICWLHGISIISGKMCIVMKFYEGSIGDKMARLKGGKLSLRDIFRYGIDLARGIMELHSKEILVLNLKPFNFLLNENDQAVLGDLGIPFVLLGFSLPSSVIARRLGTPNYMAPEQWQPEGRGPISYETDSWGFGCSIIEMLTGIQPWCGKSVDEIYHSVVKKQEKPQLPNGLPPAVENVIIGCFEYDFRSRPLMADILHAFKSSQNAVYQDGGWTGLGSRIITDKPSGSGYTEWFLSKDHLQVGDMVRSRKPPNSCKPENMDVPEGTVVGLEHDTDQNGFVLVRVHGIHDPIRVHGSTLERVTSGLAAGDWVRLKKEDKKHSPVGILHSVNRDGSVAVGFIGVETFWKGNSSEFQMAESYCIGQFVRMKSKVFSPRFEWPRKRGGEWATGRISQILPNACLVVKFPGRLTFGDECSSFLADPAEVEVVSFNKCPGMVKKYQHLEDFHWAVRPLMIALGLFTAMKLGFFVGKKVGRSKVKKGQNTVRPCDDQ-HMDGQSA---------GNTAWLPPKVANIIFREGVVTGTT 628
BLAST of DCAR_001540 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZTE8 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 964.911 bits (2493), Expect = 0.000e+0
Identity = 467/641 (72.85%), Postives = 533/641 (83.15%), Query Frame = 0
Match: A0A5B6ZTE8 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 964.911 bits (2493), Expect = 0.000e+0
Identity = 467/641 (72.85%), Postives = 533/641 (83.15%), Query Frame = 0
Query: 1 MAGQVAFNQSPAPSEDFEIVYGDFK-----VASQAQCSPLIDPSTIKLRHRLGRGPFGDVWLATLHQTAEDYEEYHEVAVKMLHHVKEDSIRTVLDKLAELFFKSRGLKGVCWMYGTSIISGKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRHGIDLAQGIREMHSKEIMVLNLKPCNFLLNENNQSILGDLGIAYVLMGIPLPSSDLTRRLGTPNYMAPEQWEPGTRGPISYETDSWGFACSIVEMLTGTQPWCGMSIDNIYKTVVEKQEKPFIPEGLPSELENVILGCFEYDFRSRPLMSDILNAFKSSQNAISSDERGIGLGSNAILDRSATSGYTEWFLSKDYLQVGDMVRSRKLSNSCKPENMDVPEGSIVGLERDTDRRGFVLVRVHAIHDPVRVHASTLERVTYGLAAGDWVRLKNVDKKHSPVGILHFVHRDGAVGVGLIGVNTLWKGSYSDLEMAETYCVGQFVRVKSNVYSPRFEWPQKRGAEWVTGRICQILPNGCLVVKFPGRLSFGDESSNFLADPAEVEVVSFKNCPGMVKKYQHLEDFHWAVRPLLIALGLFTAMKLGFIVGNKVGGSKVKKDQKLISQEDSRMHMDGKNAIWVPAKMDGQNAGWIPPNVANIIFRDGVSTAST 636
MAGQ+ N+ + S +FE+V GD VAS Q SP IDP+TIKLRHR+GRGPFGDVWLAT HQT ED+EEYHEVA+KMLH +KED+I+ VLDK LF K RGL+G+ W++G SIISGK+CIVMKFYEGS+GDKMARLKGGKLSL D+LR+GIDLAQGI E+HSKEI+VLNLKP NFLLNEN+Q++LGDLGI YVL+GIPL SSD+ RRLGTPNYMAPEQW+P RGPIS+ETDSWGF CSIVEM TGTQPW G +D IY +VV+KQEKP IP GLP +ENVI+GCFEYDFRSRPLM+DIL+AFKSSQNA+ D GLGS I D+ + SGYTEWFLSKD+LQVGDMVRSRK NSCKPENMDVPEG++VGLERDTDR GFVLVRVH IHDP+RVH STLERVT+GLAAGDWVRLK DKKHSPVGIL+ V+RDG+V G IG+ T WKG+ S+ +MAE+YC+GQFVR+KS V+SPRFEWP+KRG EW TGRI QILPN CLVVKFPGRL+FGDE S+FLADPAEVEVVSF CPGMVKKYQHLEDFHWAVRPL+IALGLFTAMKLGF VG KVG SKVKK Q + D + HMDG++A N W+PP VANIIFR+GV T +T
Sbjct: 1 MAGQLVANRRTS-SFEFELVEGDPDHPRTVVASPNQISPWIDPATIKLRHRIGRGPFGDVWLATHHQTTEDFEEYHEVAIKMLHPIKEDNIKAVLDKFNHLFSKCRGLEGISWLHGISIISGKMCIVMKFYEGSIGDKMARLKGGKLSLRDILRYGIDLAQGIIELHSKEILVLNLKPFNFLLNENDQAVLGDLGIPYVLLGIPLSSSDMARRLGTPNYMAPEQWQPEVRGPISFETDSWGFGCSIVEMFTGTQPWSGKPVDEIYYSVVKKQEKPQIPNGLPPAVENVIIGCFEYDFRSRPLMADILHAFKSSQNAVYQDGGWTGLGSRIITDKPSGSGYTEWFLSKDHLQVGDMVRSRKPPNSCKPENMDVPEGTVVGLERDTDRNGFVLVRVHGIHDPIRVHRSTLERVTFGLAAGDWVRLKKEDKKHSPVGILYSVNRDGSVAGGFIGMETFWKGNSSEFQMAESYCIGQFVRMKSKVFSPRFEWPRKRGGEWATGRISQILPNACLVVKFPGRLTFGDECSSFLADPAEVEVVSFNKCPGMVKKYQHLEDFHWAVRPLMIALGLFTAMKLGFFVGKKVGRSKVKKGQNTVKPCDDQ-HMDGQSA---------GNTAWLPPKVANIIFREGVVTGTT 630
BLAST of DCAR_001540 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7G9Y1 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 946.421 bits (2445), Expect = 0.000e+0
Identity = 457/641 (71.29%), Postives = 529/641 (82.53%), Query Frame = 0
Match: A0A7J7G9Y1 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 946.421 bits (2445), Expect = 0.000e+0
Identity = 457/641 (71.29%), Postives = 529/641 (82.53%), Query Frame = 0
Query: 1 MAGQVAFNQSPAPSEDFEIVYGDFKV-----ASQAQCSPLIDPSTIKLRHRLGRGPFGDVWLATLHQTAEDYEEYHEVAVKMLHHVKEDSIRTVLDKLAELFFKSRGLKGVCWMYGTSIISGKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRHGIDLAQGIREMHSKEIMVLNLKPCNFLLNENNQSILGDLGIAYVLMGIPLPSSDLTRRLGTPNYMAPEQWEPGTRGPISYETDSWGFACSIVEMLTGTQPWCGMSIDNIYKTVVEKQEKPFIPEGLPSELENVILGCFEYDFRSRPLMSDILNAFKSSQNAISSDERGIGLGSNAILDRSATSGYTEWFLSKDYLQVGDMVRSRKLSNSCKPENMDVPEGSIVGLERDTDRRGFVLVRVHAIHDPVRVHASTLERVTYGLAAGDWVRLKNVDKKHSPVGILHFVHRDGAVGVGLIGVNTLWKGSYSDLEMAETYCVGQFVRVKSNVYSPRFEWPQKRGAEWVTGRICQILPNGCLVVKFPGRLSFGDESSNFLADPAEVEVVSFKNCPGMVKKYQHLEDFHWAVRPLLIALGLFTAMKLGFIVGNKVGGSKVKKDQKLISQEDSRMHMDGKNAIWVPAKMDGQNAGWIPPNVANIIFRDGVSTAST 636
MAG+V + A S DFE++ GD AS Q SP IDP+TIKLRHR+GRGPFGD+WLAT HQ EDY+EYHEVA+KMLH +KED+++ VLDK +LF K +GLKGVCW++G SIISGKICIVMKFYEGSVGDKM LKGGKLSL ++LR+G+DLAQGI E+HSKEI+VLNLKP NFLLNEN ++LGDLGI YVL+GIPL SSD+ RRLGTPNYMAPEQW+P RGPIS+ETDSWGF CSIVEM TG QPW G S+D +Y VV+KQEKP IP GLP +ENVI+GCFEYD RSRP+M+DIL+AFKSSQNA+ D GL S I+D+S+ SGYTEWFLSKD LQVGDMVRSRK SNSCK ENMDVPEG+IVGLERD D+ GFVLVRVH IHDP+RVH STL+RVT+GLAAGDWVRLK DKKHSPV ILH +HRDG+V VG IG TLWKG+YS+L+MAE+YCVGQFVR+KSNV+SPRFEWP+K G EW TGR+CQILPNGCLVV+FPGRL+FGDE+S+FL DPAE+EVVSF CP M+KKYQHLEDFHWAVRPLLIALGLFTAMKLG VG K+G SKV+K K++ DS+ HMDG++ G NA W+PP VAN IFR+GVS +T
Sbjct: 15 MAGKVIGKRQMA-SFDFELIEGDVGQIRTVEASPNQISPWIDPATIKLRHRIGRGPFGDLWLATHHQATEDYDEYHEVAIKMLHPIKEDNVKVVLDKFNDLFSKCQGLKGVCWLHGISIISGKICIVMKFYEGSVGDKMGSLKGGKLSLHNILRYGMDLAQGIMELHSKEILVLNLKPFNFLLNENEGAVLGDLGIPYVLLGIPLLSSDMARRLGTPNYMAPEQWQPEVRGPISFETDSWGFGCSIVEMFTGIQPWRGKSVDELYNLVVKKQEKPQIPSGLPPAVENVIIGCFEYDLRSRPVMADILHAFKSSQNAVLQDGGWTGLTSRTIIDKSSGSGYTEWFLSKDQLQVGDMVRSRKPSNSCKHENMDVPEGTIVGLERDADQNGFVLVRVHGIHDPIRVHGSTLKRVTFGLAAGDWVRLKEEDKKHSPVSILHSIHRDGSVAVGFIGGETLWKGTYSELQMAESYCVGQFVRLKSNVFSPRFEWPRKGGGEWATGRVCQILPNGCLVVRFPGRLTFGDETSSFLGDPAEMEVVSFNTCPDMIKKYQHLEDFHWAVRPLLIALGLFTAMKLGLFVGKKMGRSKVRKRNKVVMLTDSQ-HMDGQS---------GGNAAWLPPKVAN-IFREGVSATTT 643
BLAST of DCAR_001540 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZTD1 ((Putative E3 ubiquitin-protein ligase KEG {ECO:0000313|EMBL:MPA47205.1}) (2.3.2.27 {ECO:0000313|EMBL:MPA47205.1}) (2.7.11.1 {ECO:0000313|EMBL:MPA47205.1}))
HSP 1 Score: 941.028 bits (2431), Expect = 0.000e+0
Identity = 457/638 (71.63%), Postives = 526/638 (82.45%), Query Frame = 0
Match: A0A5B6ZTD1 ((Putative E3 ubiquitin-protein ligase KEG {ECO:0000313|EMBL:MPA47205.1}) (2.3.2.27 {ECO:0000313|EMBL:MPA47205.1}) (2.7.11.1 {ECO:0000313|EMBL:MPA47205.1}))
HSP 1 Score: 941.028 bits (2431), Expect = 0.000e+0
Identity = 457/638 (71.63%), Postives = 526/638 (82.45%), Query Frame = 0
Query: 1 MAGQVAFNQSPAPSEDFEIVYGD-----FKVASQAQCSPLIDPSTIKLRHRLGRGPFGDVWLATLHQTAEDYEEYHEVAVKMLHHVKEDSIRTVLDKLAELFFKSRGLKGVCWMYGTSIISGKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRHGIDLAQGIREMHSKEIMVLNLKPCNFLLNENNQSILGDLGIAYVLMGIPLPSSDLTRRLGTPNYMAPEQWEPGTRGPISYETDSWGFACSIVEMLTGTQPWCGMSIDNIYKTVVEKQEKPFIPEGLPSELENVILGCFEYDFRSRPLMSDILNAFKSSQNAISSDERGIGLGSNAILDRSATSGYTEWFLSKDYLQVGDMVRSRKLSNSCKPENMDVPEGSIVGLERDTDRRGFVLVRVHAIHDPVRVHASTLERVTYGLAAGDWVRLKNVDKKHSPVGILHFVHRDGAVGVGLIGVNTLWKGSYSDLEMAETYCVGQFVRVKSNVYSPRFEWPQKRGAEWVTGRICQILPNGCLVVKFPGRLSFGDESSNFLADPAEVEVVSFKNCPGMVKKYQHLEDFHWAVRPLLIALGLFTAMKLGFIVGNKVGGSKVKKDQKLISQEDSRMHMDGKNAIWVPAKMDGQNAGWIPPNVANIIFRDGVST 633
MAGQ+ N+ + S +FE+V GD VAS Q SP IDP+TIKLRHR+GRGPFGDVWLAT HQT EDYEEY+EVAVKMLH +KED+IR VLDK +LF K +GL+G+CW++G SIISGK+CIVMKFYEGS+GDKMARLKGGKLSL D+ R+GIDLA+GI E+HSKEI+VLNLKP NFLLNEN+Q++LGDLGI YVL+GIPLPSSD+ RRLGTPNYMAPEQW+P RGPISYETDSWGF CSI+EMLTG QPWCG S+D IY +VV+KQEKP +P GLP +ENVI+GCFEYDFRSRPLM+DIL+AFKSSQNA+ D GLGS I D+ + SGYTEWFLSKD+LQVGDMVRSRK NSCKPENMDVPEG++VGLERDTDR GFVLVRVH IHDP+RVH STLERVT+GLAAGDWVRLK DKKHSPVGIL+ V+RDG+V G IG+ T WKG+ S+ +MAE+YCVGQFVR+KS V+SPRFEWP+KRG EW TGRICQILPNGCLVVKFPGRL+FGDE +FLADPAEVEVVSF C GMVKKYQHLEDFHWAVRPLLIA+GLFTAMKLGF VG K+G K +++ M DG+ + +A +PP VANIIFR +T
Sbjct: 1 MAGQLVANRRTS-SFEFELVEGDPDHPRTVVASPNQISPWIDPATIKLRHRIGRGPFGDVWLATHHQTTEDYEEYNEVAVKMLHPIKEDNIRAVLDKFNDLFSKCQGLEGICWLHGISIISGKMCIVMKFYEGSIGDKMARLKGGKLSLRDIFRYGIDLARGIMELHSKEILVLNLKPFNFLLNENDQAVLGDLGIPYVLLGIPLPSSDMARRLGTPNYMAPEQWQPEGRGPISYETDSWGFGCSIIEMLTGIQPWCGKSVDEIYYSVVKKQEKPQLPNGLPPAVENVIIGCFEYDFRSRPLMADILHAFKSSQNAVYQDGGWTGLGSRIITDKPSGSGYTEWFLSKDHLQVGDMVRSRKPPNSCKPENMDVPEGTVVGLERDTDRNGFVLVRVHGIHDPIRVHRSTLERVTFGLAAGDWVRLKKEDKKHSPVGILYSVNRDGSVAGGFIGMETFWKGNSSEFQMAESYCVGQFVRLKSKVFSPRFEWPRKRGGEWATGRICQILPNGCLVVKFPGRLTFGDEGRSFLADPAEVEVVSFNTCLGMVKKYQHLEDFHWAVRPLLIAMGLFTAMKLGFFVGKKMGKLK---------GQNTVMPCDGQQ--------NAGHAAGLPPKVANIIFRGTATT 620
BLAST of DCAR_001540 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QMM5 ((E3 ubiquitin-protein like {ECO:0000313|EMBL:PSS11169.1}))
HSP 1 Score: 926.006 bits (2392), Expect = 0.000e+0
Identity = 449/642 (69.94%), Postives = 525/642 (81.78%), Query Frame = 0
Match: A0A2R6QMM5 ((E3 ubiquitin-protein like {ECO:0000313|EMBL:PSS11169.1}))
HSP 1 Score: 926.006 bits (2392), Expect = 0.000e+0
Identity = 449/642 (69.94%), Postives = 525/642 (81.78%), Query Frame = 0
Query: 1 MAGQVAFNQSPAPSEDFEIVYGDFKV-----ASQAQCSPLIDPSTIKLRHRLGRGPFGDVWLATLHQTAEDYEEYHEVAVKMLHHVKEDSIRTVLDKLAELFFKSRGLKGVCWMYGTSIISGKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRHGIDLAQGIREMHSKEIMVLNLKPCNFLLNENNQSILGDLGIAYVLMGIPLPSSDLTRRLGTPNYMAPEQWEPGTRGPISYETDSWGFACSIVEMLTGTQPWCGMSIDNIYKTVVEKQEKPFIPEGLPSELENVILGCFEYDFRSRPLMSDILNAFKSSQNAISSDERGIGLGSNAILDRSATSGYTEWFLSKDYLQVGDMVRSRKLSNSCKPENMDVPEGSIVGLERDTDRRGFVLVRVHAIHDPVRVHASTLERVTYGLAAGDWVRLK-NVDKKHSPVGILHFVHRDGAVGVGLIGVNTLWKGSYSDLEMAETYCVGQFVRVKSNVYSPRFEWPQKRGAEWVTGRICQILPNGCLVVKFPGRLSFGDESSNFLADPAEVEVVSFKNCPGMVKKYQHLEDFHWAVRPLLIALGLFTAMKLGFIVGNKVGGSKVKKDQKLISQEDSRMHMDGKNAIWVPAKMDGQNAGWIPPNVANIIFRDGVSTAST 636
MAG+VA P S DFE+V GD AS Q SP IDP+TIKLRHR+GRGPFGDVWLAT HQT EDY EYHEVAVKMLH ++ED I+ VLDK ++LF K + LKGVC + G SII GK+CIVMKFYEGSVGDKM+RLKGGKLSL ++R+GIDLAQGI E+HSKEI+VLNLKP NFLLNEN+ ++LGDLGI Y+L+GIPL SSD+ RLGTP+YMAPEQW+P RGPIS+ETDSWGF CSIVEM TG QPW G S++ IY VV+KQEKP IP GLP +ENVI+GCFEYD RSRP+M+DIL+AF+SSQNA+ D+ GL S AI+++S+ SGYTEWFL+KD+LQVGDMVRSRK SNSCK ENMD+PEG+IVGL+ DTD+ GFVLVRVH IHDPVRVH STLERVT+GLA GDWVRLK + +KKHSPVGILH +HRDG V VG IG TLWKG+ S+L+MAE+YCVGQFV++KSNV+SPRFEWPQK G+EW TGR+CQILPNGCL+VKFPGRL+FGDESS+FLADPA+VEVVSF CPG++KKYQHLEDFHWAVRP LIALGLF+AMK G VG KVG SK KK Q + Q D + H DG+N+ N+ W+PP VAN IFR+GV +T
Sbjct: 1 MAGKVA--DRPPASFDFELVEGDSGQLRTVKASPRQISPWIDPATIKLRHRIGRGPFGDVWLATHHQTTEDYVEYHEVAVKMLHSIREDLIKIVLDKFSDLFCKCQSLKGVCLLQGISIIGGKVCIVMKFYEGSVGDKMSRLKGGKLSLHSIMRYGIDLAQGIMELHSKEILVLNLKPFNFLLNENDGAVLGDLGIPYMLLGIPLLSSDMAHRLGTPHYMAPEQWQPEVRGPISFETDSWGFGCSIVEMFTGNQPWRGKSVNEIYNLVVKKQEKPLIPSGLPPAVENVIIGCFEYDLRSRPVMADILHAFRSSQNAVHRDDGWTGLSSRAIIEKSSGSGYTEWFLAKDHLQVGDMVRSRKQSNSCKLENMDLPEGTIVGLDADTDQNGFVLVRVHGIHDPVRVHRSTLERVTFGLAVGDWVRLKDDENKKHSPVGILHSIHRDGTVAVGFIGEETLWKGNSSELQMAESYCVGQFVKLKSNVFSPRFEWPQKYGSEWATGRVCQILPNGCLLVKFPGRLTFGDESSSFLADPAQVEVVSFNTCPGVIKKYQHLEDFHWAVRPFLIALGLFSAMKFGLFVGKKVGRSKAKKRQNTMMQCDGQ-HSDGQNS---------GNSAWLPPKVAN-IFREGVGATTT 629
BLAST of DCAR_001540 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5A7S4 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 917.146 bits (2369), Expect = 0.000e+0
Identity = 443/622 (71.22%), Postives = 513/622 (82.48%), Query Frame = 0
Match: A0A5J5A7S4 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 917.146 bits (2369), Expect = 0.000e+0
Identity = 443/622 (71.22%), Postives = 513/622 (82.48%), Query Frame = 0
Query: 1 MAGQVAFNQSPAPSEDFEIVYGDFKVASQAQCSPLIDPSTIKLRHRLGRGPFGDVWLATLHQTAEDYEEYHEVAVKMLHHVKEDSIRTVLDKLAELFFKSRGLKGVCWMYGTSIISGKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRHGIDLAQGIREMHSKEIMVLNLKPCNFLLNENNQSILGDLGIAYVLMGIPLPSSDLTRRLGTPNYMAPEQWEPGTRGPISYETDSWGFACSIVEMLTGTQPWCGMSIDNIYKTVVEKQEKPFIPEGLPSELENVILGCFEYDFRSRPLMSDILNAFKSSQNAISSDERGIGLGSNAILDRSATSGYTEWFLSKDYLQVGDMVRSRKLSNSCKPENMDVPEGSIVGLERDTDRRGFVLVRVHAIHDPVRVHASTLERVTYGLAAGDWVRLKNVDKKHSPVGILHFVHRDGAVGVGLIGVNTLWKGSYSDLEMAETYCVGQFVRVKSNVYSPRFEWPQKRGAEWVTGRICQILPNGCLVVKFPGRLSFGDESSNFLADPAEVEVVSFKNCPGMVKKYQHLEDFHWAVRPLLIALGLFTAMKLGFIVGNKVGGSKVKKDQKLISQEDSRMHMDGKNAIWVPAKMDGQNAGWIPPNV 622
MA Q N+ P S DFE V D AS + S IDP+TIKLRHR+GRGPFGDVWLAT HQ ED+EE HEVA+KMLH +KED+I+ VLDK +LF + +GL+GVCW++G SIISGK+CIVMKFYEGSVGD+MARLKGGKLSL D+LR+G+DLAQGI E+HSKEI+VLNLKP NFLLNEN++++LGDLGI YVL+ I LPSSD+ RRLGTPNYMAPEQW+P RGPIS+ETDSWGF CSIVE+LTG QPW G S+D IY +VV+KQEKP IP GLP +ENVI+GCF+YDFR+RPLM+DIL AFKSSQNA+ D GLGS I D+S+ SGYTEWFL KD+LQVGDMVRSRK NSCKPENMDVP G+IVGLERDTD+ G VLVRVH IHDP+RV++STLERVT GLAAGDWV LK DKKHSPVGILH V+RDG+V VG +GV TLWKG+ S+ +MAE+YC+GQFV+++S V+SPRFEWP+KRG +W TGRICQILPNGCLVVKFPGRL+FGDE S FLADPAEVEVVSF CPGMVKKYQHLED HWAVRPL+IALGLFTAMKLGF VG KVG SKVKK Q + D + +MD ++A NA W+PP V
Sbjct: 1 MARQPVANR-PTTSFDFEFVESDSDAASPKKISSWIDPATIKLRHRIGRGPFGDVWLATHHQRTEDFEENHEVAIKMLHPIKEDNIKAVLDKFNDLFSRCQGLEGVCWLHGISIISGKMCIVMKFYEGSVGDRMARLKGGKLSLRDILRYGMDLAQGIMELHSKEILVLNLKPFNFLLNENDRAVLGDLGIPYVLLRITLPSSDMARRLGTPNYMAPEQWQPEVRGPISFETDSWGFGCSIVELLTGAQPWSGKSVDEIYYSVVKKQEKPQIPSGLPPAVENVIIGCFQYDFRNRPLMADILRAFKSSQNAVYHDGGWTGLGSRMITDKSSGSGYTEWFLFKDHLQVGDMVRSRKPPNSCKPENMDVPNGTIVGLERDTDQNGCVLVRVHGIHDPIRVNSSTLERVTSGLAAGDWVHLKREDKKHSPVGILHSVNRDGSVAVGFVGVETLWKGNSSEFQMAESYCIGQFVKLQSKVFSPRFEWPRKRGGQWATGRICQILPNGCLVVKFPGRLTFGDECSCFLADPAEVEVVSFNTCPGMVKKYQHLEDIHWAVRPLIIALGLFTAMKLGFYVGKKVGRSKVKKGQNTVIPCDDQ-YMDDQSA---------GNAAWLPPKV 611
BLAST of DCAR_001540 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q2L1 ((E3 ubiquitin-protein like {ECO:0000313|EMBL:PSS01114.1}))
HSP 1 Score: 909.827 bits (2350), Expect = 0.000e+0
Identity = 442/640 (69.06%), Postives = 520/640 (81.25%), Query Frame = 0
Match: A0A2R6Q2L1 ((E3 ubiquitin-protein like {ECO:0000313|EMBL:PSS01114.1}))
HSP 1 Score: 909.827 bits (2350), Expect = 0.000e+0
Identity = 442/640 (69.06%), Postives = 520/640 (81.25%), Query Frame = 0
Query: 1 MAGQVAFNQSPAPSEDFEIVYGD----FKVASQAQCSPLIDPSTIKLRHRLGRGPFGDVWLATLHQTAEDYEEYHEVAVKMLHHVKEDSIRTVLDKLAELFFKSRGLKGVCWMYGTSIISGKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRHGIDLAQGIREMHSKEIMVLNLKPCNFLLNENNQSILGDLGIAYVLMGIPLPSSDLTRRLGTPNYMAPEQWEPGTRGPISYETDSWGFACSIVEMLTGTQPWCGMSIDNIYKTVVEKQEKPFIPEGLPSELENVILGCFEYDFRSRPLMSDILNAFKSSQNAISSDERGIGLGSNAILDRSATSGYTEWFLSKDYLQVGDMVRSRKLSNSCKPENMDVPEGSIVGLERDTDRRGFVLVRVHAIHDPVRVHASTLERVTYGLAAGDWVRLKNVDKKHSPVGILHFVHRDGAVGVGLIGVNTLWKGSYSDLEMAETYCVGQFVRVKSNVYSPRFEWPQKRGAEWVTGRICQILPNGCLVVKFPGRLSFGDESSNFLADPAEVEVVSFKNCPGMVKKYQHLEDFHWAVRPLLIALGLFTAMKLGFIVGNKVGGSKVKKDQKLISQEDSRMHMDGKNAIWVPAKMDGQNAGWIPPNVANIIFRDGVSTAST 636
MAG+VA N+ PA S +FE+V GD AS +Q S IDP+TIKLRHR+GRGPFGDVWLAT HQT E+Y EY EVAVKMLH ++ED I+ VLDK ++LF K + LKGVC + G SII GK+CIVMKFYEGSVGDKM+ LKGGKLSL +R+GID+AQGI E+HSKEI+VLNLKP NFLLNEN+ ++LGD GI ++L+GIPLPS D+ RRLGTPNYMAPEQW+P RGP+S+ETDSWGF CSIVEM TG QPWCG S+D IY VV+KQEKP IP GLP +ENVI+GCFEYD RSRP+M+DIL+AF+SSQNA+ D GL S AI+D+S+ SGYTEWFL+KD+LQVGDMVRSRK SNSCK ENMD+PEG+IVGL+ DTD+ GFVLVRVH IHDPVRV+ STLERVT+GL AGDWVRLK +KKHSPVGILH + RDG V VG IG TLWKG+ S+L+MAE+YCVGQFV++KSNV+SPRFEWPQK G EW TGR+CQILPNGCL+VKFPGRL+FGDES +FLADPA+VEVVSF CPG++KKYQHLEDFHWAVRPLLI LGLFTAMKLG VG KV K K Q + Q D + ++DG+N+ N+ W+PP VAN IFR+GV +T
Sbjct: 1 MAGKVA-NRPPA-SFEFELVEGDSCQLTVKASPSQISLWIDPTTIKLRHRIGRGPFGDVWLATHHQTTENYVEYREVAVKMLHPIREDHIKVVLDKFSDLFCKCQSLKGVCLLQGISIIGGKMCIVMKFYEGSVGDKMSCLKGGKLSLHSTMRYGIDMAQGIMELHSKEILVLNLKPFNFLLNENDGAVLGDFGIPHMLLGIPLPSLDMARRLGTPNYMAPEQWQPEVRGPVSFETDSWGFGCSIVEMFTGNQPWCGKSVDEIYNLVVQKQEKPQIPSGLPPAVENVIIGCFEYDLRSRPVMADILHAFRSSQNAVHRDGGWTGLSSRAIIDKSSGSGYTEWFLAKDHLQVGDMVRSRKQSNSCKLENMDLPEGTIVGLDADTDQNGFVLVRVHGIHDPVRVYRSTLERVTFGLVAGDWVRLKEENKKHSPVGILHSIRRDGTVAVGFIGEETLWKGNSSELQMAESYCVGQFVKLKSNVFSPRFEWPQKCGGEWATGRVCQILPNGCLLVKFPGRLTFGDESGSFLADPAQVEVVSFNTCPGVIKKYQHLEDFHWAVRPLLITLGLFTAMKLGLFVGKKVRRLKANKRQNSVMQCDGQ-YLDGQNS---------GNSAWLPPKVAN-IFREGVGATTT 627
BLAST of DCAR_001540 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J4ZT18 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 909.442 bits (2349), Expect = 0.000e+0
Identity = 456/638 (71.47%), Postives = 520/638 (81.50%), Query Frame = 0
Match: A0A5J4ZT18 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 909.442 bits (2349), Expect = 0.000e+0
Identity = 456/638 (71.47%), Postives = 520/638 (81.50%), Query Frame = 0
Query: 1 MAGQVAFNQSPAPSEDFEIVYGD-----FKVASQAQCSPLIDPSTIKLRHRLGRGPFGDVWLATLHQTAEDYEEYHEVAVKMLHHVKEDSIRTVLDKLAELFFKSRGLKGVCWMYGTSIISGKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRHGIDLAQGIREMHSKEIMVLNLKPCNFLLNENNQSILGDLGIAYVLMGIPLPSSDLTRRLGTPNYMAPEQWEPGTRGPISYETDSWGFACSIVEMLTGTQPWCGMSIDNIYKTVVEKQEKPFIPEGLPSELENVILGCFEYDFRSRPLMSDILNAFKSSQNAISSDERGIGLGSNAILDRSATSGYTEWFLSKDYLQVGDMVRSRKLSNSCKPENMDVPEGSIVGLERDTDRRGFVLVRVHAIHDPVRVHASTLERVTYGLAAGDWVRLKNVDKKHSPVGILHFVHRDGAVGVGLIGVNTLWKGSYSDLEMAETYCVGQFVRVKSNVYSPRFEWPQKRGAEWVTGRICQILPNGCLVVKFPGRLSFGDESSNFLADPAEVEVVSFKNCPGMVKKYQHLEDFHWAVRPLLIALGLFTAMKLGFIVGNKVGGSKVKKDQKLISQEDSRMHMDGKNAIWVPAKMDGQNAGWIPPNVANIIFRDGVST 633
MAGQ+ NQ P S +FE+V GD VASQ Q SP IDP+TIKLRHR+GRGPFGDVWL T HQT+EDYE VAVKMLH +KED+IR VLDK +LF K +GL+G+CW++G S ISGK+CIVMKF EGS+GDKMARLKGGKL L D+ R+GIDLA GI E+HSKEI+VLNLKP NFLLNEN++++LGD GI Y+L+GI LPSS + RRLGTPNYMAPEQWEP RGPISYETDSWGF CSIVEMLTG QPW G S+D IY +VV+KQEKP IP GLP +ENVI+GCFEYDFRSRPLM+DIL+A KSSQNA+ D GLGS I+D+ + SGYTEWFLSKD+L+VGD VRSRK NSCKPENMDVPEG++VGLE DTDR GFVLVRVH IHDPVRVH STLERVT+GLAAGDWVRLK DKKHSPVGIL+ V+RDG+V G IG+ T WKG+ S+ +MAE+YCVGQFVR+KS V+SPRFEWP+KRG EW TGRICQILPNGCLVVKFPGRL+FGDE +FLADPAE EVVSF CPGMVKKYQHLEDFHWAVRPLLIA+GLFTAMKLGF VG K+G KVKK ++ D + HMDG+NA G AG+ PP VANIIFR +T
Sbjct: 1 MAGQLLANQ-PKSSFEFELVEGDPDHLRTVVASQKQISPWIDPATIKLRHRIGRGPFGDVWLGTHHQTSEDYE----VAVKMLHPIKEDNIRAVLDKFNDLFSKCQGLEGLCWLHGISSISGKMCIVMKFCEGSIGDKMARLKGGKLLLRDIFRYGIDLAGGILELHSKEILVLNLKPFNFLLNENDRAVLGDFGIPYILLGISLPSSVMARRLGTPNYMAPEQWEPEVRGPISYETDSWGFGCSIVEMLTGIQPWYGKSVDEIYHSVVKKQEKPQIPSGLPPAVENVIIGCFEYDFRSRPLMADILHALKSSQNAVYQDGGWTGLGSRIIMDKPSGSGYTEWFLSKDHLEVGDTVRSRKPPNSCKPENMDVPEGTVVGLEHDTDRDGFVLVRVHGIHDPVRVHRSTLERVTFGLAAGDWVRLKKEDKKHSPVGILYSVNRDGSVAGGFIGMETFWKGNSSEFQMAESYCVGQFVRLKSKVFSPRFEWPRKRGGEWTTGRICQILPNGCLVVKFPGRLTFGDECHSFLADPAEAEVVSFNTCPGMVKKYQHLEDFHWAVRPLLIAMGLFTAMKLGFFVGKKMGKLKVKKGLNTVTPSDGQ-HMDGQNA--------GHAAGF-PPKVANIIFRGTATT 623
BLAST of DCAR_001540 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2U1PAD9 ((Protein kinase superfamily protein {ECO:0000313|EMBL:PWA82708.1}))
HSP 1 Score: 909.057 bits (2348), Expect = 0.000e+0
Identity = 433/641 (67.55%), Postives = 519/641 (80.97%), Query Frame = 0
Match: A0A2U1PAD9 ((Protein kinase superfamily protein {ECO:0000313|EMBL:PWA82708.1}))
HSP 1 Score: 909.057 bits (2348), Expect = 0.000e+0
Identity = 433/641 (67.55%), Postives = 519/641 (80.97%), Query Frame = 0
Query: 1 MAGQVAFNQSPAPSEDFEIVYGDFKV-----ASQAQCSPLIDPSTIKLRHRLGRGPFGDVWLATLHQTAEDYEEYHEVAVKMLHHVKEDSIRTVLDKLAELFFKSRGLKGVCWMYGTSIISGKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRHGIDLAQGIREMHSKEIMVLNLKPCNFLLNENNQSILGDLGIAYVLMGIPLPSSDLTRRLGTPNYMAPEQWEPGTRGPISYETDSWGFACSIVEMLTGTQPWCGMSIDNIYKTVVEKQEKPFIPEGLPSELENVILGCFEYDFRSRPLMSDILNAFKSSQNAISSDERGIGLGSNAILDRSATSGYTEWFLSKDYLQVGDMVRSRKLSNSCKPENMDVPEGSIVGLERDTDRRGFVLVRVHAIHDPVRVHASTLERVTYGLAAGDWVRLKNVDKKHSPVGILHFVHRDGAVGVGLIGVNTLWKGSYSDLEMAETYCVGQFVRVKSNVYSPRFEWPQKRGAEWVTGRICQILPNGCLVVKFPGRLSFGDESSNFLADPAEVEVVSFKNCPGMVKKYQHLEDFHWAVRPLLIALGLFTAMKLGFIVGNKVGGSKVKKDQKLISQEDSRMHMDGKNAIWVPAKMDGQNAGWIPPNVANIIFRDGVSTAST 636
MAG+V N+ P+P DFEIV D+ AS +P I P++IKLRHRLGRGPFGDVWLAT H ++YEEYHEVAVKMLHH+KED+I+ VLDKL LF K RGL+G CW++G S+I+GKICI+MKFYEGSVGD+MARLKGGK SL DVLR+GIDLA+GI E+HSKE+++LNLKPCN LLNE+ ++ILGDLGI YVL+G+PLPSSD+TRRLGTPNYMAPEQW+P RGP+++ETDSWGF CSIVEMLTG QPWCG SID+IY++VV++QEKP IP+GLP +ENVILGCFEYDFRSRPLM+DIL F+SS+NA+ D +GS I+D+S +GYTEWFLSKD+L+VGDMVRSRK NSCKPENM VPEG+IVGL+ D+D+ G+VLVRVH IHDPVRVH STLERVT+GLAAGDWVRLK +KKHSPVGILH ++R+G V +G+IG+ TLWKG YSDL+MAETYC GQFVR+KSNV+SPRF+W +K G EW TGRI Q+LPNGCLVVKFP RL+FGD +S FLADPAEVE+VSF P M+KKYQHLEDFHWAVRP L++LGLF A+K G VG K GGS+ + Q + D NA W+PPN+ANIIFR+GV+T +T
Sbjct: 1 MAGKVVPNRPPSPF-DFEIVDKDYDQLTSTDASANYINPWIKPASIKLRHRLGRGPFGDVWLATRHLVTDEYEEYHEVAVKMLHHIKEDNIKAVLDKLNVLFSKCRGLEGSCWLHGVSVINGKICIIMKFYEGSVGDQMARLKGGKFSLGDVLRYGIDLARGIIEIHSKEMLILNLKPCNILLNEDQKAILGDLGIPYVLLGVPLPSSDMTRRLGTPNYMAPEQWQPDVRGPLAFETDSWGFGCSIVEMLTGQQPWCGKSIDDIYESVVKRQEKPHIPDGLPPAVENVILGCFEYDFRSRPLMTDILRVFESSKNAVYHDGNWTNIGSRTIVDKSVLNGYTEWFLSKDHLEVGDMVRSRKPLNSCKPENMLVPEGTIVGLDTDSDQNGYVLVRVHGIHDPVRVHGSTLERVTFGLAAGDWVRLKKENKKHSPVGILHSINREGNVSIGVIGIETLWKGDYSDLQMAETYCPGQFVRLKSNVFSPRFQWLKKIGCEWATGRISQVLPNGCLVVKFPSRLTFGDANSCFLADPAEVELVSFSTSPNMMKKYQHLEDFHWAVRPFLVSLGLFIAVKTGVRVGRKFGGSRNNSETTEGQQ-----------------RGDIANAKWLPPNMANIIFREGVTTTTT 623
BLAST of DCAR_001540 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2N9FH75 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 908.286 bits (2346), Expect = 0.000e+0
Identity = 441/639 (69.01%), Postives = 517/639 (80.91%), Query Frame = 0
Match: A0A2N9FH75 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 908.286 bits (2346), Expect = 0.000e+0
Identity = 441/639 (69.01%), Postives = 517/639 (80.91%), Query Frame = 0
Query: 1 MAGQVAFNQSPAPSEDFEIVYGD-----FKVASQAQCSPLIDPSTIKLRHRLGRGPFGDVWLATLHQTAEDYEEYHEVAVKMLHHVKEDSIRTVLDKLAELFFKSRGLKGVCWMYGTSIISGKICIVMKFYEGSVGDKMARLKGGKLSLPDVLRHGIDLAQGIREMHSKEIMVLNLKPCNFLLNENNQSILGDLGIAYVLMGIPLPSSDLTRRLGTPNYMAPEQWEPGTRGPISYETDSWGFACSIVEMLTGTQPWCGMSIDNIYKTVVEKQEKPFIPEGLPSELENVILGCFEYDFRSRPLMSDILNAFKSSQNAISSDERGIGLGSNAILDRSATSGYTEWFLSKDYLQVGDMVRSRKLSNSCKPENMDVPEGSIVGLERDTDRRGFVLVRVHAIHDPVRVHASTLERVTYGLAAGDWVRLKNVDKKHSPVGILHFVHRDGAVGVGLIGVNTLWKGSYSDLEMAETYCVGQFVRVKSNVYSPRFEWPQKRGAEWVTGRICQILPNGCLVVKFPGRLSFGDESSNFLADPAEVEVVSFKNCPGMVKKYQHLEDFHWAVRPLLIALGLFTAMKLGFIVGNKVGGSKVKKDQKLISQEDSRMHMDGKNAIWVPAKMDGQNAGWIPPNVANIIFRDGVSTA 634
MA QV Q PA S +FE++ D VA +Q SP I P+ +KLRHR+GRG FGDVWLAT HQ+ EDYE++HEVAVK+LH +KED +R VLDK +LF K +GL+GVCW+ G SIISGKICI+ KFYEGSVGDKMARL+GGKLSLPDVLR+GIDLAQG E+HSK I+VLNLKP N L NEN+Q+ILGD G+ Y+L+GIPLPSSD+ RRLGTPNYMAPEQW+P RGPIS ETDSWGF CSIVEMLTG QPW G S+D IY +V +KQEKPFIP GLP +LENV++GCFEYD RSRPLM+DIL+ FKS QNA+++D GLG+ +I+++S+ +GYTEWFL+KD LQVGD VRSRK NSCKPENMDVPEG++VGLE D DR GFVLVRVH IHDP+RVH STLERVT+GL AGDWVRLK DKKHSPVGI+H ++R+G+V VG IG+ TLWKGS S+ +MAE+YCVGQFV +K+NV SPRFEWP+KRG W TGRI ILPNGCL+VKFPG L+ DE S+ +ADPAEVE V+F CPGMVKKYQHLEDFHWAVRPLLI LGLFTAMKLG VG K+G SKVKK Q + Q DS+ HMDG+NA N WIPP VAN++FR+GVSTA
Sbjct: 1 MAKQVVPVQ-PAASFEFELLEDDPDHVTTVVAWSSQISPWIQPTKLKLRHRIGRGNFGDVWLATHHQSTEDYEQFHEVAVKILHPIKEDHMRVVLDKFEDLFSKCQGLRGVCWLQGISIISGKICIITKFYEGSVGDKMARLRGGKLSLPDVLRYGIDLAQGTLELHSKGILVLNLKPTNVLFNENDQAILGDFGVPYLLLGIPLPSSDMARRLGTPNYMAPEQWQPEVRGPISLETDSWGFGCSIVEMLTGVQPWRGRSVDEIYHSVAKKQEKPFIPCGLPPQLENVLIGCFEYDLRSRPLMTDILHVFKSLQNAVNNDGGWTGLGTGSIMEKSSNTGYTEWFLAKDCLQVGDTVRSRKPPNSCKPENMDVPEGTVVGLECDPDRDGFVLVRVHGIHDPLRVHISTLERVTFGLVAGDWVRLKEEDKKHSPVGIIHSINRNGSVAVGFIGMETLWKGSSSEFQMAESYCVGQFVSLKANVLSPRFEWPRKRGGAWATGRIWWILPNGCLLVKFPGILTLRDEWSS-IADPAEVEAVAFNTCPGMVKKYQHLEDFHWAVRPLLITLGLFTAMKLGIFVGKKMGRSKVKKQQTIAIQSDSQ-HMDGQNA---------GNPAWIPPKVANMLFREGVSTA 627
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6ZUM7 | E-Value: 0.000e+0, PID: 72.93 | (Putative E3 ubiquitin-protein ligase KEG {ECO:000... [more] |
| A0A5B6ZTE8 | E-Value: 0.000e+0, PID: 72.85 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A7J7G9Y1 | E-Value: 0.000e+0, PID: 71.29 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A5B6ZTD1 | E-Value: 0.000e+0, PID: 71.63 | (Putative E3 ubiquitin-protein ligase KEG {ECO:000... [more] |
| A0A2R6QMM5 | E-Value: 0.000e+0, PID: 69.94 | (E3 ubiquitin-protein like {ECO:0000313|EMBL:PSS11... [more] |
| A0A5J5A7S4 | E-Value: 0.000e+0, PID: 71.22 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A2R6Q2L1 | E-Value: 0.000e+0, PID: 69.06 | (E3 ubiquitin-protein like {ECO:0000313|EMBL:PSS01... [more] |
| A0A5J4ZT18 | E-Value: 0.000e+0, PID: 71.47 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A2U1PAD9 | E-Value: 0.000e+0, PID: 67.55 | (Protein kinase superfamily protein {ECO:0000313|E... [more] |
| A0A2N9FH75 | E-Value: 0.000e+0, PID: 69.01 | Protein kinase domain-containing protein {ECO:0000... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |