Resource Type:
Polypeptide
Name:
DCAR_001567
Identifier:
DCAR_001567.mRNA-protein
Sequence:
MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDAKFTFLRSSRSVLDLC
AAPGGWMQVAVERVPVGSLVIGVDLDPIRPIRGAIGIQEDITQSKCRASI
KRLLSENGSRAFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATEFLA
PKGTFITKVFSAFSVSMVNYFVDEWRFKVCVFAESMRFMSLIQVFRSQDY
TAVLYCLRQLFEKVEVDKPSASRSASAEIYVVAFKYKAPAKIDPRLLDFK
HLFQGGKEPAKVIDVLRTTKAKRHRDGYEDGATILRKVCSASDFVWSDAP
LDILGSVTSISFDGSECSPIKEHALTTEEVKSLCDDLRVLGKQDFKYLLK
WRMNIRKALSPSKAAVAATTKVDSESKTDEDEAEDEDQKVLNEMEEMTYA
MDRKKKRAKKVLSKRRAKDKARKATGMQVDVMEDGYTDHDLFSLSSIKGK
RDLVAVEDTENEEEINKVVDSDDEDTGAAGQDDSQSDLDSDEERKRYDEQ
LEDFLDQAYERFVARKEGSTKQRKRLRQNYAKDGESLEDGDDDNVVHSDQ
DSDNERPAQEANPLVVPLDGDEATQEEIAAKWFSQDVFADEDEHEDMDKD
DSEDELEVVRPVKKPPSPEKGTKKTTQQTQASKTKDDFEIVPAPETDSSD
DSSSDESEEDVETKAEILAMAKKMLRKKTRETMLDDAYNKYMFHDDGLPK
WFVDEEKKHSQPIKPVTKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVA
MRTLEKVRKKANSISDLPDINERSKTKMIDQLYKKAAPKRPKRELVVAKK
GVQVKAGKGKLLVDRRMKKDARAVKAASKKGKGKGKNSKDNKGKKPGKEF
SAKGGKAGNKRR*
Sequence Length:
863
Sequence Checksum:
8c2399bee468cddf287118dbc52724bb
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_001567, derives from mRNA, DCAR_001567. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_001567 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_001567 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BKF2 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1169.45 bits (3024), Expect = 0.000e+0
Identity = 611/862 (70.88%), Postives = 696/862 (80.74%), Query Frame = 0
Match: A0A5B7BKF2 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1169.45 bits (3024), Expect = 0.000e+0
Identity = 611/862 (70.88%), Postives = 696/862 (80.74%), Query Frame = 0
Query: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDAKFTFLRSSRSVLDLCAAPGGWMQVAVERVPVGSLVIGVDLDPIRPIRGAIGIQEDITQSKCRASIKRLLSENGSRAFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATEFLAPKGTFITKVFSAFSVSMVNYFVDEWRFKVCVFAESMRFMSLIQVFRSQDYTAVLYCLRQLFEKVEVDKPSASRSASAEIYVVAFKYKAPAKIDPRLLDFKHLFQGGKEPAKVIDVLRTTKAKRHRDGYEDGATILRKVCSASDFVWSDAPLDILGSVTSISFDGSECSPIKEHALTTEEVKSLCDDLRVLGKQDFKYLLKWRMNIRKALSPSKAAVAATTKVDSESKTDEDEAEDEDQKVLNEMEEMTYAMDRKKKRAKKVLSKRRAKDKARKATGMQVDVMEDGYTDHDLFSLSSIKGKRDLVAVEDTENEEEINKVVDSDDEDTGAAGQDDSQSDLDSDEERKRYDEQLEDFLDQAYERFVARKEGSTKQRKRLRQNYAKDGESLEDGDDDNVVHSDQDSDNERPAQEANPLVVPLDGDEATQEEIAAKWFSQDVFADEDEHEDMDKDDSEDELEVVRPVKKPPSPEKGTKKTTQQTQASKTKDDFEIVPAPET-DSSDDSSSDESEEDVETKAEILAMAKKMLRKKTRETMLDDAYNKYMFHDDGLPKWFVDEEKKHSQPIKPVTKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMRTLEKVRKKANSISDLPDINERSKTKMIDQLYKKAAPKRPKRELVVAKKGVQVKAGKGKLLVDRRMKKDARAVKAASKKGKGKGKNSKDNKGKKPGKEFSAKG-GKAGNK 860
MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLD+KFTFLRS+ SVLDLCAAPGGWMQ AV RVPVGSL+IGVDLDPIRPIRGAI +Q+DIT+ +CRA+IKRL++ENG RAFDLVLHDGSPNVGGAWA+EATSQNALVIDS+KLATEFLAPKGTF+TKVF RSQDY+AVLYCLRQLFEKVEVDKP ASRS SAEIYV+ FKYKAPAKIDPRLLD KHLFQGG+EP KVIDVLR TK KRHRDGYEDG T LRKVCSA+DFVWSD PL+ILGSV I+F+ C PIK+HALTTEEVK+LCDDLRVLGKQDFK+LLKWRM IRKALSPS+ A AT ++ E+K +EDE ++LNEMEE+TY M+RKKKRAKK+L+KRRAKDKARK TGMQVD +EDGY DH+LFSLSSIKGK+DLVAV+ E ++E V DS++ED Q S D+DSDEER+RYDE++E+FLDQAYER+VARKEGSTKQRKR +QNY+KDG+ E GD+++++HSDQDSDN++ EANPL+VPL + TQEEI KWFSQD+FA+ DE ED+ K DSEDE++V P + P+K K Q+ QASK +DDFEIVPAP T S D SS + +EDV+TKAEILA AKKMLRKK RE MLDDAYNKYMFHDDGLPKWF+DEE +H+QPIKPVTKEE+AAM+AQFKEIDARPAKKVAQAKARKKRVAMR LEKVRKKAN+ISD DI +RSK KMIDQLYKKA PKRP++E VVAKKGVQV+AGKGK+LVDRRMKKDARA + K +GK F A G GK GNK
Sbjct: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDSKFTFLRSAHSVLDLCAAPGGWMQAAVGRVPVGSLIIGVDLDPIRPIRGAITVQDDITKPQCRAAIKRLMAENGRRAFDLVLHDGSPNVGGAWAQEATSQNALVIDSLKLATEFLAPKGTFVTKVF-----------------------------------RSQDYSAVLYCLRQLFEKVEVDKPLASRSTSAEIYVLGFKYKAPAKIDPRLLDVKHLFQGGQEPPKVIDVLRGTKQKRHRDGYEDGDTTLRKVCSAADFVWSDTPLEILGSVAFITFEDPACLPIKDHALTTEEVKALCDDLRVLGKQDFKHLLKWRMQIRKALSPSQKATPATADIEHENKDNEDE------RILNEMEELTYGMERKKKRAKKLLAKRRAKDKARKGTGMQVDALEDGYIDHELFSLSSIKGKKDLVAVDSAEFDDETGDVRDSENEDNREEDQGYSSIDVDSDEERRRYDEKVEEFLDQAYERYVARKEGSTKQRKRSKQNYSKDGQLFEGGDEEDIIHSDQDSDNDQGDHEANPLMVPLVEEVPTQEEITRKWFSQDIFAEADEQEDLRKYDSEDEMQVDGPGAEVSIPKKTKKNAVQKIQASKAEDDFEIVPAPATDSSDDSSSDESEDEDVDTKAEILAYAKKMLRKKQREHMLDDAYNKYMFHDDGLPKWFMDEENRHNQPIKPVTKEEIAAMKAQFKEIDARPAKKVAQAKARKKRVAMRQLEKVRKKANTISDQADICDRSKRKMIDQLYKKATPKRPQKEYVVAKKGVQVRAGKGKVLVDRRMKKDARAHGMNKQGKGTSKKGKGQQRGK---GSFKASGKGKKGNK 818
BLAST of DCAR_001567 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9TV16 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1167.91 bits (3020), Expect = 0.000e+0
Identity = 596/833 (71.55%), Postives = 687/833 (82.47%), Query Frame = 0
Match: A0A6I9TV16 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1167.91 bits (3020), Expect = 0.000e+0
Identity = 596/833 (71.55%), Postives = 687/833 (82.47%), Query Frame = 0
Query: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDAKFTFLRSSRSVLDLCAAPGGWMQVAVERVPVGSLVIGVDLDPIRPIRGAIGIQEDITQSKCRASIKRLLSENGSRAFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATEFLAPKGTFITKVFSAFSVSMVNYFVDEWRFKVCVFAESMRFMSLIQVFRSQDYTAVLYCLRQLFEKVEVDKPSASRSASAEIYVVAFKYKAPAKIDPRLLDFKHLFQGGKEPAKVIDVLRTTKAKRHRDGYEDGATILRKVCSASDFVWSDAPLDILGSVTSISFDGSECSPIKEHALTTEEVKSLCDDLRVLGKQDFKYLLKWRMNIRKALSPSKAAVAATTKVDSESKTDEDEAEDEDQKVLNEMEEMTYAMDRKKKRAKKVLSKRRAKDKARKATGMQVDVMEDGYTDHDLFSLSSIKGKRDLVAVEDTENEEEINKVVDSDDEDTGAAGQDDSQSDLDSDEERKRYDEQLEDFLDQAYERFVARKEGSTKQRKRLRQNYAKDGESLEDGDDDNVVHSDQDSDNERPAQEANPLVVPLDGDEATQEEIAAKWFSQDVFADEDEHEDMDKDDSEDELEVVRPVKKPP--------SPEKGTKKTT--QQTQASKTKDDFEIVPAPETDSSDDSSSDESEED-VETKAEILAMAKKMLRKKTRETMLDDAYNKYMFHDDGLPKWFVDEEKKHSQPIKPVTKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMRTLEKVRKKANSISDLPDINERSKTKMIDQLYKKAAPKRPKRELVVAKKGVQVKAGKGKLLVDRRMKKDAR 822
MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLD+KF FLRS+ SVLDLCAAPGGWMQV+VERVPVGSLV+GVDLDPIRPIRGAI +QEDIT+ KCRA++KR+++ENG RAFDLVLHDGSPNVGGAWA+EATSQNALVIDSVKLATE LAPKGTF+TKVF RSQDYTAVLYCLRQLFEKVEVDKP ASRSASAEIY++ KYKAPAKIDPRLLD KHLFQGGKEP KV+DVLR TK KRHRDGYEDG T LRK+C AS+F+WS+APL+ILGSV+SI+F+ C PIK+H LTTEEVKSLCDDLRVLGKQDFK+LLKWRM++RKALS S+ A + T+ V+ ESK EDED++VLNEMEE+T AM+RKKKRAKK+L+KR AK+KARKA G Q+D +EDGY D +LFSLSSIKGK+DLVAV++ E +++ + +S+ E++ ++D+ SD+DS+EER+RYDEQ+E LD+AYERFVA+K+GSTKQRKR +Q Y+ D + LED D D+ +HSDQDSDN+ EANPLVVPL + TQEEIAA+WFSQDVF DEDEHE++DKDDSEDE++V P P SPE + K + Q Q SK +D FEIVPAP TDSSD SSSD+S+ED +ETKAEILA AKKML KK RE MLDDAYNKYMFHD+GLPKWF+DEEK+H QPIKPVTKEEVAAMRAQFKEIDARPAKKVA+AKARKKRVA R LEKVRKKANSISD DI++RSK KMI+QLYKKAAPK+P+RE VVAKKGVQVK GKGK+LVDRRMKKDAR
Sbjct: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDSKFGFLRSAHSVLDLCAAPGGWMQVSVERVPVGSLVVGVDLDPIRPIRGAISVQEDITEPKCRATVKRIMAENGCRAFDLVLHDGSPNVGGAWAREATSQNALVIDSVKLATELLAPKGTFVTKVF-----------------------------------RSQDYTAVLYCLRQLFEKVEVDKPQASRSASAEIYILGLKYKAPAKIDPRLLDVKHLFQGGKEPPKVVDVLRGTKQKRHRDGYEDGDTTLRKLCPASEFIWSEAPLEILGSVSSITFNDPACLPIKDHTLTTEEVKSLCDDLRVLGKQDFKHLLKWRMHMRKALSSSEKAPSVTSIVEHESK------EDEDERVLNEMEELTDAMERKKKRAKKILAKRHAKEKARKALGRQMDAVEDGYIDQELFSLSSIKGKKDLVAVDNNEFDDDAGDIRNSESEESHDEAEEDTSSDVDSEEERRRYDEQVEKLLDEAYERFVAKKDGSTKQRKRSKQTYSNDDQLLED-DGDSRLHSDQDSDNDGANHEANPLVVPLLENAPTQEEIAAQWFSQDVFMDEDEHEELDKDDSEDEMQVEAPPVHPRVAGKKMEYSPEGPSSKKSKLQSLQPSKVEDGFEIVPAPATDSSDSSSSDDSDEDGIETKAEILACAKKMLTKKQREEMLDDAYNKYMFHDEGLPKWFLDEEKRHRQPIKPVTKEEVAAMRAQFKEIDARPAKKVAEAKARKKRVAFRKLEKVRKKANSISDQADISDRSKRKMIEQLYKKAAPKKPEREYVVAKKGVQVKTGKGKVLVDRRMKKDAR 791
BLAST of DCAR_001567 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834G5L6 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7126449.1}))
HSP 1 Score: 1166.37 bits (3016), Expect = 0.000e+0
Identity = 611/846 (72.22%), Postives = 690/846 (81.56%), Query Frame = 0
Match: A0A834G5L6 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7126449.1}))
HSP 1 Score: 1166.37 bits (3016), Expect = 0.000e+0
Identity = 611/846 (72.22%), Postives = 690/846 (81.56%), Query Frame = 0
Query: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDAKFTFLRSSRSVLDLCAAPGGWMQVAVERVPVGSLVIGVDLDPIRPIRGAIGIQEDITQSKCRASIKRLLSENGSRAFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATEFLAPKGTFITKVFSAFSVSMVNYFVDEWRFKVCVFAESMRFMSLIQVFRSQDYTAVLYCLRQLFEKVEVDKPSASRSASAEIYVVAFKYKAPAKIDPRLLDFKHLFQGGKEPAKVIDVLRTTKAKRHRDGYEDGATILRKVCSASDFVWSDAPLDILGSVTSISFDGSECSPIKEHALTTEEVKSLCDDLRVLGKQDFKYLLKWRMNIRKALSPSKAAVAATTKVDSESKTDEDEAEDEDQKVLNEMEEMTYAMDRKKKRAKKVLSKRRAKDKARKATGMQVDVMEDGYTDHDLFSLSSIKGKRDLVAVEDTENEEEINKVVDSDDEDTGAAGQDDSQSDLDSDEERKRYDEQLEDFLDQAYERFVARKEGSTKQRKRLRQNYAKDGESLEDGDDDNVVHSDQDSDNERPAQEANPLVVPLDGDEATQEEIAAKWFSQDVF--ADEDEHEDMDKDDSEDEL--------------------EVVRPVKKPPSPEKGTKKTTQQTQASK-TKDDFEIVPAPETDSSDDSSSDESEEDVETKAEILAMAKKMLRKKTRETMLDDAYNKYMFHDDGLPKWFVDEEKKHSQPIKPVTKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMRTLEKVRKKANSISDLPDINERSKTKMIDQLYKKAAPKRPKRELVVAKKGVQVKAGKGKLLVDRRMKKDARA 823
MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLD+KF+FLRSSR VLDLCAAPGGWMQVAVERVPVGSLVIGVDL PIRP+RGAIG++EDIT+ +CRA++KRL+SENG RAFDLVLHDGSPNVGGAWA+EATSQNALVIDSVKLATEFLAPKGTF+TKVF RSQDY+AVLYCLRQLFEKV+VDKP+ASRS SAEIY++ KYKAPAKIDPRLLDFKHLFQGGKEP KV+DVLR TK KRHRDGYEDGAT+LRKVCSASDFVWSD+PL+ILGSVTSI+F C PI +HALTTEEVK+LCDDLRVLGKQDFK+LLKWR++IRKALSPS A A+TT+V+ ESK DEDE K+LNEMEE+TYAMDRKKKRAKKVL+KR+AK+K+RKATGMQVD EDGYTDH+LFSLSS+KGK+DL V+ E ++E VVDS+DE T Q+ S SD+DSDEERKRYDEQ+E+ LDQAYERFV +KEGSTKQRKRL+Q + KDGE EDGD+D + DQDSDN+ EANPLVVPL+ +E TQEEIA KWF DVF AD++ D+DK DSEDE+ +V PV+ P P K K ++ Q SK T+DDFEIVPAP +DSSDDSSSDES++DVETKAEILA AKKMLRKK RE MLDDAYNK+MFHD GLPKWF DEEKKH Q +KP+TKEEVAAMRAQFK IDAR +KKV QAKARKKRVAMR LEKVRKKAN+ISD DI++RSKTKMI+ LYKK+ PKRP++E VVAKKGVQVK GKGK+LVDRRMKKDARA
Sbjct: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDSKFSFLRSSRGVLDLCAAPGGWMQVAVERVPVGSLVIGVDLVPIRPVRGAIGVEEDITKPQCRATVKRLMSENGCRAFDLVLHDGSPNVGGAWAQEATSQNALVIDSVKLATEFLAPKGTFVTKVF-----------------------------------RSQDYSAVLYCLRQLFEKVDVDKPAASRSTSAEIYIIGLKYKAPAKIDPRLLDFKHLFQGGKEPPKVLDVLRGTKQKRHRDGYEDGATVLRKVCSASDFVWSDSPLEILGSVTSITFKDPACLPITDHALTTEEVKALCDDLRVLGKQDFKHLLKWRISIRKALSPSHKA-ASTTEVEPESKVDEDE------KMLNEMEELTYAMDRKKKRAKKVLAKRQAKEKSRKATGMQVDATEDGYTDHELFSLSSMKGKKDLAVVDTGEYDDETGDVVDSEDE-TCKERQELSSSDVDSDEERKRYDEQMEEMLDQAYERFVEKKEGSTKQRKRLKQMHLKDGELSEDGDEDERIPLDQDSDNDGADHEANPLVVPLE-EEPTQEEIARKWFLLDVFDEADDELVGDVDKFDSEDEMKVDEAPKQLRLPEGTKKNDMQVAEPVEPPTVPTKNKKNRVKEIQPSKKTEDDFEIVPAPASDSSDDSSSDESDDDVETKAEILAYAKKMLRKKQREQMLDDAYNKHMFHDKGLPKWFEDEEKKHRQLVKPITKEEVAAMRAQFKAIDARSSKKVLQAKARKKRVAMRQLEKVRKKANTISDQADISDRSKTKMIESLYKKSTPKRPQKEYVVAKKGVQVKVGKGKVLVDRRMKKDARA 802
BLAST of DCAR_001567 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RHC7 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1154.43 bits (2985), Expect = 0.000e+0
Identity = 599/853 (70.22%), Postives = 686/853 (80.42%), Query Frame = 0
Match: A0A2R6RHC7 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1154.43 bits (2985), Expect = 0.000e+0
Identity = 599/853 (70.22%), Postives = 686/853 (80.42%), Query Frame = 0
Query: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDAKFTFLRSSRSVLDLCAAPGGWMQVAVERVPVGSLVIGVDLDPIRPIRGAIGIQEDITQSKCRASIKRLLSENGSRAFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATEFLAPKGTFITKVFSAFSVSMVNYFVDEWRFKVCVFAESMRFMSLIQVFRSQDYTAVLYCLRQLFEKVEVDKPSASRSASAEIYVVAFKYKAPAKIDPRLLDFKHLFQGGKEPAKVIDVLRTTKAKRHRDGYEDGATILRKVCSASDFVWSDAPLDILGSVTSISFDGSECSPIKEHALTTEEVKSLCDDLRVLGKQDFKYLLKWRMNIRKALSPSKAAVAATTKVDSESKTDEDEAEDEDQKVLNEMEEMTYAMDRKKKRAKKVLSKRRAKDKARKATGMQVDVMEDGYTDHDLFSLSSIK--------GKRDLVAVEDTENEEEINKVVDSDDEDTGAAGQDDSQSDLDSDEERKRYDEQLEDFLDQAYERFVARKEGSTKQRKRLRQNYAKDGESLEDGDDDNVVHSDQDSDNERPAQEANPLVVPLDGDEATQEEIAAKWFSQDVFADEDEHEDMDKDDSEDELE--------------------VVRPVKKPPSPEKGTKKTTQQTQASKTKDDFEIVPAPET-DSSDDSSSDESEEDVETKAEILAMAKKMLRKKTRETMLDDAYNKYMFHDD-GLPKWFVDEEKKHSQPIKPVTKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMRTLEKVRKKANSISDLPDINERSKTKMIDQLYKKAAPKRPKRELVVAKKGVQVKAGKGKLLVDRRMKKDARA 823
MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLD+KF+FLRSSR+VLDLCAAPGGWMQVAVERVPV SLVIGVDL PIRP+RGAI ++EDIT+++CRA+IK+L++ENG RA DLVLHDGSPNVGGAWA+EATSQNALVIDSVKLATEFLAPKGTF+TKVF RSQDY+AVLYCLRQLFEKVEVDKP+ASRS SAEIY+V KYKAPAKIDPRLLD KHLFQGGKEP KV+DVL TK KRHRDGYEDGAT+LRKVCSA+DFVWS+ PL+ILGSVTSI+F+ C PIK+ +LTTEE+K+LCDDLRVLGKQDFK+LLKWRM+IRKALSPS A++ T D E +T ++ED+++LNEMEE+TYAMDRKKKR KK+LSKRRAKDKARKATGMQVD +EDGY DH+LFSLSSIK GK+DLVAV+ E+++E V DS++E+TG Q+ SD+DSDEER+RYDE +E+ LDQAYER+V +KEGST+QRKRL++ +AKD E E DDDN++HSDQDSDN+R EANPLVVPLD +E TQEE+A KWFS DVF +EDE DM + DSEDE+E V V P K K Q+ +ASK +DDFEIVPAPET S D SS + +EDV TKAEILA AKKMLRKK RE +LDDAYNKYMFHDD GLP WF+DEEKKH QPIKP+TKEEVAAM+AQFKEIDARPAKKVAQAKARKKRVAMR LEKVRKKANSISD DI++RSK+KMI+QLYKKA P+RPK+E VVAKKGVQVK GKGK+LVDRRMKKDAR+
Sbjct: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDSKFSFLRSSRAVLDLCAAPGGWMQVAVERVPVASLVIGVDLVPIRPVRGAIAVEEDITKTQCRATIKKLMAENGCRALDLVLHDGSPNVGGAWAQEATSQNALVIDSVKLATEFLAPKGTFVTKVF-----------------------------------RSQDYSAVLYCLRQLFEKVEVDKPAASRSTSAEIYIVGLKYKAPAKIDPRLLDVKHLFQGGKEPPKVVDVLGGTKQKRHRDGYEDGATVLRKVCSAADFVWSEKPLEILGSVTSITFNDPACEPIKDQSLTTEEIKALCDDLRVLGKQDFKHLLKWRMSIRKALSPSHKAISTT---DGEHET----KDNEDERILNEMEELTYAMDRKKKREKKLLSKRRAKDKARKATGMQVDAVEDGYVDHELFSLSSIKANLIGDTQGKKDLVAVDTAEHDDETGVVGDSENEETGKEQQESLSSDVDSDEERRRYDEHMEEILDQAYERYVEKKEGSTRQRKRLKEKHAKDSELFEGSDDDNMIHSDQDSDNDRGDHEANPLVVPLDEEEPTQEEVARKWFSLDVFDEEDEPRDMGRSDSEDEMEVDGAGNQLRLPKLSKKKEMQVAELVDSLTIPTKVKKDKVQEGKASKAEDDFEIVPAPETDSSDDSSSDESEDEDVGTKAEILAYAKKMLRKKQREQILDDAYNKYMFHDDKGLPNWFLDEEKKHRQPIKPITKEEVAAMKAQFKEIDARPAKKVAQAKARKKRVAMRQLEKVRKKANSISDQADISDRSKSKMIEQLYKKATPQRPKKEYVVAKKGVQVKPGKGKVLVDRRMKKDARS 811
BLAST of DCAR_001567 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9H4F7 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1152.89 bits (2981), Expect = 0.000e+0
Identity = 581/833 (69.75%), Postives = 679/833 (81.51%), Query Frame = 0
Match: A0A2G9H4F7 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1152.89 bits (2981), Expect = 0.000e+0
Identity = 581/833 (69.75%), Postives = 679/833 (81.51%), Query Frame = 0
Query: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDAKFTFLRSSRSVLDLCAAPGGWMQVAVERVPVGSLVIGVDLDPIRPIRGAIGIQEDITQSKCRASIKRLLSENGSRAFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATEFLAPKGTFITKVFSAFSVSMVNYFVDEWRFKVCVFAESMRFMSLIQVFRSQDYTAVLYCLRQLFEKVEVDKPSASRSASAEIYVVAFKYKAPAKIDPRLLDFKHLFQGGKEPAKVIDVLRTTKAKRHRDGYEDGATILRKVCSASDFVWSDAPLDILGSVTSISFDGSECSPIKEHALTTEEVKSLCDDLRVLGKQDFKYLLKWRMNIRKALSPSKAAVAATTKVDSESKTDEDEAEDEDQKVLNEMEEMTYAMDRKKKRAKKVLSKRRAKDKARKATGMQVDVMEDGYTDHDLFSLSSIKGKRDLVAVEDTENEEEINKVVDSDDEDTGAAGQDDSQSDLDSDEERKRYDEQLEDFLDQAYERFVARKEGSTKQRKRLRQNYAKDGESLEDGDDDNVVHSDQDSDNERPAQEANPLVVPLDGDEATQEEIAAKWFSQDVFADEDEHEDMDKDDSEDELEVVRPVKKPPSPEKGTKKT----------TQQTQASKTKDDFEIVPAPET-DSSDDSSSDESEEDVETKAEILAMAKKMLRKKTRETMLDDAYNKYMFHDDGLPKWFVDEEKKHSQPIKPVTKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMRTLEKVRKKANSISDLPDINERSKTKMIDQLYKKAAPKRPKRELVVAKKGVQVKAGKGKLLVDRRMKKDAR 822
MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLD+KF FLRS+ SVLDLCAAPGGWMQV+VERVPVGSLV+GVDLDPIRPIRGAI QEDIT KCRA++KR+++ENG RAFDL+LHDGSPNVGGAWAKEATSQNALVIDSVKLATE LAPKGTF+TKVF RSQDYTAVLYCLRQLFEKVEVDKP ASRSASAEIY++ FKYKAPAKIDPRLLD KHLFQGGKEP KV+DVLR TK KRHRDGYEDG T LRK+CSAS+F+ S+ PL+ILGSV+SI+F+ E P+K+H LTTEEVK+LCDDLRVLGKQDFK+LL+WRM++RKALSPS+ A A TKV+ ESK EDED++VLNEMEE+T AM+RKKKRAKK+L+KR+AKDKARKA G Q+D +EDGY D +LFSLSSIKGK+DLVAV++ E +++ + +S+ E++ + + SD+DS+EER+RYDE++E LD+AYE FVA+KEGS KQRKR +Q+Y+KD + +E D D+++HSDQDSDN+ EANPL+VPLD + TQEEIAA+WFSQDVF D D+ ++DKDDSEDE++V PVK P EK + T Q ++SK +DDFEIVPAP T S SS + E+D+ TKAEILA AKKML KK RE MLDDAYNKYMFHD+GLPKWF+DEEK+H QPIKPVTKEE+AAMRAQFKEIDARPAKKVA+AKARKKRVA+R LEKVRKKANSISD DI++RSKTKMI+QLYKKA PK+P++E VVAKKGVQVKAGKGK+LVDRRMKKD R
Sbjct: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDSKFGFLRSAHSVLDLCAAPGGWMQVSVERVPVGSLVVGVDLDPIRPIRGAISAQEDITTPKCRATVKRIMAENGCRAFDLILHDGSPNVGGAWAKEATSQNALVIDSVKLATELLAPKGTFVTKVF-----------------------------------RSQDYTAVLYCLRQLFEKVEVDKPQASRSASAEIYILGFKYKAPAKIDPRLLDVKHLFQGGKEPPKVVDVLRGTKQKRHRDGYEDGDTTLRKLCSASEFICSETPLEILGSVSSITFNDPESLPLKDHTLTTEEVKALCDDLRVLGKQDFKHLLRWRMHVRKALSPSEKAPPAATKVEHESK------EDEDERVLNEMEELTNAMERKKKRAKKILAKRQAKDKARKALGRQMDAVEDGYFDQELFSLSSIKGKKDLVAVDNNEYDDDAGDIRNSESEESHDEADEYTSSDVDSEEERRRYDEKVEKLLDEAYENFVAKKEGSAKQRKRSKQSYSKDDQLVEGDDGDSMIHSDQDSDNDGAEHEANPLMVPLDENAPTQEEIAAQWFSQDVFMDADDPVELDKDDSEDEMQVDLPVKHPKVTEKKMEDTQEPNGKKNNKLQVARSSKVEDDFEIVPAPATDSSDSSSSDESDEDDITTKAEILACAKKMLTKKQREQMLDDAYNKYMFHDEGLPKWFLDEEKRHRQPIKPVTKEEIAAMRAQFKEIDARPAKKVAEAKARKKRVALRKLEKVRKKANSISDQADISDRSKTKMIEQLYKKATPKKPEKEYVVAKKGVQVKAGKGKVLVDRRMKKDTR 792
BLAST of DCAR_001567 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0ET76 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1140.18 bits (2948), Expect = 0.000e+0
Identity = 596/868 (68.66%), Postives = 684/868 (78.80%), Query Frame = 0
Match: A0A7J0ET76 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1140.18 bits (2948), Expect = 0.000e+0
Identity = 596/868 (68.66%), Postives = 684/868 (78.80%), Query Frame = 0
Query: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDAKFTFLRSSRSVLDLCAAPGGWMQVAVERVPVGSLVIGVDLDPIRPIRGAIGIQEDITQSKCRASIKRLLSENGSRAFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATEFLAPKGTFITKVFSAFSVSMVNYFVDEWRFKVCVFAESMRFMSLIQVFRSQDYTAVLYCLRQLFEKVEVDKPSASRSASAEIYVVAFKYKAPAKIDPRLLDFKHLFQGGKEPAKVIDVLRTTKAKRHRDGYEDGATILRKVCSASDFVWSDAPLDILGSVTSISFDGSECSPIKEHALTTEEVKSLCDDLRVLGKQDFKYLLKWRMNIRKALSPSKAAVAATTKVDSESKTDEDEAEDEDQKVLNEMEEMTYAMDRKKKRAKKVLSKRRAKDKARKATGMQVDVMEDGYTDHDLFSLSSI-----------------------KGKRDLVAVEDTENEEEINKVVDSDDEDTGAAGQDDSQSDLDSDEERKRYDEQLEDFLDQAYERFVARKEGSTKQRKRLRQNYAKDGESLEDGDDDNVVHSDQDSDNERPAQEANPLVVPLDGDEATQEEIAAKWFSQDVFADEDEHEDMDKDDSEDELEVVRPVKKPPSPEKGTKK--------------------TTQQTQASKTKDDFEIVPAP-ETDSSDDSSSDESEEDVETKAEILAMAKKMLRKKTRETMLDDAYNKYMFHDD-GLPKWFVDEEKKHSQPIKPVTKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMRTLEKVRKKANSISDLPDINERSKTKMIDQLYKKAAPKRPKRELVVAKKGVQVKAGKGKLLVDRRMKKDARA 823
MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLD+KF+FLRSSR+VLDLCAAPGGWMQVAVERVPV SLVIGVDL PIRP+RGAI ++EDIT+S+CRA+IK+L++ENG RA DLVLHDGSPNVGGAWA+EATSQNALVIDSVKLATEFLAPKGTF+TKVF RSQDY+AVLYCLRQLFEKVEVDKP+ASRS SAEIY+V KYKAPAKIDPRLLD KHLFQGGKEP KV+DVL TK KRHRDGYEDGAT+LRKVCSA+DFVWS+ PL+ILGSVTSI+F+ C PIK+ +LTTEE+K+LCDDLRVLGKQDFK+LLKWRM+IRKALSPS A+ +TT + ESK +EDE ++LNEMEE+TYAMDRKKKR KK+LSKRRAKDKARKATGMQVD +EDGY DH+LFSL + +GK+DLVAV+ E+++E V DS++E+TG Q+ SD+DSDEER+RYDE +E+ LDQAYER+V +KEGST+QRKRL++ +AKD E E DDDN++HSDQDSDN+R EANPLVVPLD +E TQEEIA KWFS DVF +EDE DM + DSEDE+EV +P P+ KK Q+ +ASK +DDFEIVPAP S D +S + +EDV TKAEILA AKKMLRKK RE +LDDAYNKYMFHDD GLP WF+DEEKKH QPIKP+TKEEVAAM+AQFKEIDARPAKKVAQAKARKKRVAMR LEKVRKKANSISD DI++RSK+KMI+QLYKKA P+RPK+E VVAKKGVQVK GKGK+LVDRRMKKDAR+
Sbjct: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDSKFSFLRSSRAVLDLCAAPGGWMQVAVERVPVASLVIGVDLVPIRPVRGAIAVEEDITKSQCRATIKKLMAENGCRALDLVLHDGSPNVGGAWAQEATSQNALVIDSVKLATEFLAPKGTFVTKVF-----------------------------------RSQDYSAVLYCLRQLFEKVEVDKPAASRSTSAEIYIVGLKYKAPAKIDPRLLDVKHLFQGGKEPPKVVDVLGGTKQKRHRDGYEDGATVLRKVCSAADFVWSEKPLEILGSVTSITFNDPACKPIKDQSLTTEEIKALCDDLRVLGKQDFKHLLKWRMSIRKALSPSHKAI-STTAGEHESKDNEDE------RILNEMEELTYAMDRKKKREKKLLSKRRAKDKARKATGMQVDAVEDGYVDHELFSLYLLSSEILDVVAFENLDTLANLIGDTQGKKDLVAVDTAEHDDETGVVGDSENEETGKEQQESLSSDVDSDEERRRYDEHMEEILDQAYERYVEKKEGSTRQRKRLKEKHAKDSELFEGSDDDNMIHSDQDSDNDRGDHEANPLVVPLDEEEPTQEEIARKWFSLDVFDEEDEPRDMGRSDSEDEMEVDGAGNQPRLPKLSKKKEMQVAELVDSLTIPTKVKKDKVQEGKASKAEDDFEIVPAPETDSSDDSTSDESEDEDVGTKAEILAYAKKMLRKKQREQILDDAYNKYMFHDDKGLPNWFLDEEKKHRQPIKPITKEEVAAMKAQFKEIDARPAKKVAQAKARKKRVAMRQLEKVRKKANSISDQADISDRSKSKMIEQLYKKATPQRPKKEYVVAKKGVQVKPGKGKVLVDRRMKKDARS 826
BLAST of DCAR_001567 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2C9W0V9 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1127.85 bits (2916), Expect = 0.000e+0
Identity = 592/870 (68.05%), Postives = 694/870 (79.77%), Query Frame = 0
Match: A0A2C9W0V9 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1127.85 bits (2916), Expect = 0.000e+0
Identity = 592/870 (68.05%), Postives = 694/870 (79.77%), Query Frame = 0
Query: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDAKFTFLRSSRSVLDLCAAPGGWMQVAVERVPVGSLVIGVDLDPIRPIRGAIGIQEDITQSKCRASIKRLLSENGSRAFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATEFLAPKGTFITKVFSAFSVSMVNYFVDEWRFKVCVFAESMRFMSLIQVFRSQDYTAVLYCLRQLFEKVEVDKPSASRSASAEIYVVAFKYKAPAKIDPRLLDFKHLFQGGKEPA-KVIDVLRTTKAKRHRDGYEDGATILRKVCSASDFVWSDAPLDILGSVTSISFDGSECSPIKEHALTTEEVKSLCDDLRVLGKQDFKYLLKWRMNIRKALSPSKAAVAATTKVDSESKTDEDEAEDEDQKVLNEMEEMTYAMDRKKKRAKKVLSKRRAKDKARKATGMQVDVMEDGYTDHDLFSLSSIKGKRDLVAVEDTENEEEINKVVDSDDEDTGAAGQDDSQSDLDSDEERKRYDEQLEDFLDQAYERFVARKEGSTKQRKRLRQNYAKDGESLEDGDDDNVVHSDQDSDNERPAQEANPLVVPL-DGDEATQEEIAAKWFSQDVFADEDEHEDMDKDDSEDELEVVRPVKKPPSPEKGTKKTTQ----QTQASKTKDDFEIVPAP-ETDSSDDSSSDESEEDVETKAEILAMAKKMLRKKTRETMLDDAYNKYMFHDDGLPKWFVDEEKKHSQPIKPVTKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMRTLEKVRKKANSISDLPDINERSKTKMIDQLYKKAAPKRPKRELVVAKKGVQVKAGKGKLLVDRRMKKDARAVKAASKKGKG---KGKNSKDNKGKKPGKEFSAKGGKAGNK 860
MGK KGKHRLDKYYHLAKEHGYRSRA+WKLVQLD+KF FL SSR+VLDLCAAPGGWMQVAVERVPVGSLV+G+DL I PIRGA+ I++DIT+S+C+A IK+++ ENG +AFDLVLHDGSPN+GGAWA+EAT+QNALVIDSVKLAT+FLAPKG F+TKVF RSQDY +VLYCL QLFEKVEVDKPSASRS SAEI++V KYKAPAKIDPRLLD KHLFQG EPA KVIDVLR TK KRHRDGYEDG +I+RKV SA+DFVWSDAPL+ILGSVTSI F+G PI++HALTTEE+K+LCDDLRVLGKQDFK+LLKWRM++RKALSP++ A ++T V+ E K + EDED K+LNEMEE+TYAM+RK+K+ KK +KRRAKDKARKATGMQ+D MEDGYTDH+LFSLSSIKGK+DLVAV+ EN+++ ++ D ++++T Q++S SD+DSDEER+RYDEQ+E+FLDQ YERFV +KEGSTKQRKR RQ Y+K + LE DD V+HSD SD + QEANPL+VPL DG+ TQEEI KWF+Q+VFA E D++K DSED ++V + +K PEK TK T Q Q SK ++DFEIVPAP S D S+ D ++DVETKAE+LA AKKMLRKK RE MLDDAYNKYMF D+GLP WFV+EE++H QP+KPVTKEE+AAMRAQFKEI+ARPAKKVAQAKARKKRVAMR LEKVRKKAN+ISD DI++RSK KMI+QLYKKA PKRPK+E VVAKKGV VKAGKGK+LVDRRMKKDARA + K GKG KGKN+K KGK GK SAK G GNK
Sbjct: 1 MGKAKGKHRLDKYYHLAKEHGYRSRASWKLVQLDSKFHFLHSSRAVLDLCAAPGGWMQVAVERVPVGSLVLGIDLVRIAPIRGAVSIEQDITKSECKARIKKIMGENGVKAFDLVLHDGSPNIGGAWAQEATAQNALVIDSVKLATQFLAPKGNFVTKVF-----------------------------------RSQDYNSVLYCLNQLFEKVEVDKPSASRSTSAEIFLVGLKYKAPAKIDPRLLDVKHLFQGSIEPARKVIDVLRGTKQKRHRDGYEDGESIVRKVSSAADFVWSDAPLEILGSVTSIVFEGPTSLPIRDHALTTEEIKTLCDDLRVLGKQDFKHLLKWRMHVRKALSPTQKA--SSTAVNGEEK----KQEDEDDKLLNEMEELTYAMERKRKQEKKRDAKRRAKDKARKATGMQIDAMEDGYTDHELFSLSSIKGKKDLVAVDSAENDDDNGELRDGENDETDNEAQENSSSDVDSDEERRRYDEQMEEFLDQVYERFVTKKEGSTKQRKRARQAYSK--QLLEGDGDDVVIHSDYGSDEDLGDQEANPLMVPLNDGEAPTQEEITNKWFTQEVFAKAAEDGDLEKYDSEDAMQVDKQERKLAVPEKTTKNGTGSKAIQPQTSKAEEDFEIVPAPATDSSDDSSTDDSDDDDVETKAEVLAYAKKMLRKKQREQMLDDAYNKYMFDDEGLPGWFVEEERRHRQPMKPVTKEEIAAMRAQFKEINARPAKKVAQAKARKKRVAMRKLEKVRKKANTISDQTDISDRSKRKMIEQLYKKATPKRPKKEYVVAKKGVAVKAGKGKVLVDRRMKKDARA-RGTGKPGKGASKKGKNAKGQKGKGLGKS-SAKHGNKGNK 825
BLAST of DCAR_001567 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EWG3 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1126.69 bits (2913), Expect = 0.000e+0
Identity = 598/888 (67.34%), Postives = 695/888 (78.27%), Query Frame = 0
Match: A0A4S4EWG3 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1126.69 bits (2913), Expect = 0.000e+0
Identity = 598/888 (67.34%), Postives = 695/888 (78.27%), Query Frame = 0
Query: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDAKFTFLRSSRSVLDLCAAPGGWMQVAVERVPVGSLVIGVDLDPIRPIRGAIGIQEDITQSKCRASIKRLLSENGSRAFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATEFLAPKGTFITKVFSAFSVSMVNYFVDEWRFKVCVFAESMRFMSLIQVFRSQDYTAVLYCLRQLFEKVEVDKPSASRSASAEIYVVAFKYKAPAKIDPRLLDFKHLFQGGKEPAKVIDVLRTTKAKRHRDGYEDGATILRKVCSASDFVWSDAPLDILGSVTSISFDGSECSPIKEHALTTEEVKSLCDDLRVLGKQDFKYLLKWRMNIRKALSPSKAAVAATTKVDSESKTDEDEAEDEDQKVLNEMEEMTYAMDRKKKRAKKVLSKRRAKDKARKATGMQVDVMEDGYTDHDLFSLSSIKGKRDLVAVEDTENEEEINKVVDSDDEDTGAAGQDDSQSDLDSDEERKRYDEQLEDFLDQAYERFVARKEGSTKQRKRLRQNYAKDGESLEDGDDDNVVHSDQDSDNERPAQEANPLVVPLDGDEATQEEIAAKWFSQDVFADEDEHEDMDKDDSEDELEVVRPVKKPPSPEKGTKKT-----------------------TQQTQASKTKDDFEIVPAPET--DSSDDSSSDESEEDVETKAEILAMAKKMLRKKTRETMLDDAYNKYMFHDDGLPKWFVDEEKKHSQPIKPVTKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMRTLEKVRKKANSISDLPDINERSKTKMIDQLYKKAAPKRPKRELVVAKKGVQVKAGKGKLLVDRRMKKDARAV---KAASKKGKGKGKNSKDNKGKKPGKEFSAKGGKAGNK 860
MGKVKGKHRLDKYYHLAKEHGYRSRAAWKL+QL++KF+FLRSSR+VLDLCAAPGGWMQV+VERVPVGSLVIGVDL PIRP+RGAIG++EDIT+ +CRA+IKRL++ENG RAFDLVLHDGSPNVGGAWA+EATSQNALVIDSVKLATEFLA KGTF+TKVF RSQDY+AVLYCLRQLFEKVEVDKP+ASRS SAEIY++ FKYKAP+KIDPRLLD KHLF+GGKEP KV+DVLR T KRHRDGYEDG +ILRKVCSA+DF+WSD+PL+ILGSVTSI F C PIK+H LTTEEV++LCDDLRVLGKQDFK+LLKWR++IRKALSPS A + TT V+ D+D ++ED+++LNEMEE+T AMD KKKRAKK+L+KR AKDKARK GMQVD DGYTDH+LFSLSSIKGK+DL V+ E ++E VVDS++E+T Q+ SD+DSDEER+RYDEQ+E+ LDQAYER+V +KEGST QRKR +Q ++KD E LE GDDDN+VHSDQDSDN+R EANPL+VPL + TQEEI +WFSQDVF + DE DM+K DSEDE++V + P KGTKK Q+ +ASK ++DFEIVPAP T S + ++DV KAEILA AKKMLRKK RE MLDDAYNKYMFHDDGLP WF+DEEK+H PIKP+TKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMR LEKVRKKAN+ISD DI++RSK+KMI+QLYKKA P+RP++E VVAKKGVQV+AGKGK+LVDRRMKKDAR K KGK ++D KGK PGK S+ GK G+K
Sbjct: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLIQLESKFSFLRSSRAVLDLCAAPGGWMQVSVERVPVGSLVIGVDLVPIRPVRGAIGVEEDITKPQCRAAIKRLMAENGCRAFDLVLHDGSPNVGGAWAQEATSQNALVIDSVKLATEFLAAKGTFVTKVF-----------------------------------RSQDYSAVLYCLRQLFEKVEVDKPAASRSTSAEIYILGFKYKAPSKIDPRLLDVKHLFEGGKEPPKVVDVLRGTNQKRHRDGYEDGQSILRKVCSAADFIWSDSPLEILGSVTSIDFKDPACLPIKDHTLTTEEVETLCDDLRVLGKQDFKHLLKWRISIRKALSPSNKATSTTTDVE-HENKDDDNKDNEDERILNEMEELTNAMDHKKKRAKKLLAKRLAKDKARKKMGMQVDATSDGYTDHELFSLSSIKGKKDLATVDTAEYDDETGDVVDSENEET-RERQESLSSDVDSDEERRRYDEQMEEMLDQAYERYVEKKEGSTMQRKRSKQLHSKDTELLEGGDDDNMVHSDQDSDNDRGDHEANPLMVPLVEEAPTQEEITRQWFSQDVFDEADEPGDMEKSDSEDEMQVDGARNQLSLP-KGTKKNWKPQVAEPEEPLSIPMSVPKKNKVQEVKASKAENDFEIVPAPATDSSDDSSSDESDDDDDVYKKAEILACAKKMLRKKHREQMLDDAYNKYMFHDDGLPNWFLDEEKRHRVPIKPITKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMRNLEKVRKKANTISDQADISDRSKSKMIEQLYKKATPRRPQKEYVVAKKGVQVRAGKGKVLVDRRMKKDARTQGMNKKGKGGSSKKGKGARDQKGKGPGK--SSGKGKMGSK 848
BLAST of DCAR_001567 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6WE36 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1119.76 bits (2895), Expect = 0.000e+0
Identity = 582/836 (69.62%), Postives = 669/836 (80.02%), Query Frame = 0
Match: A0A6P6WE36 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1119.76 bits (2895), Expect = 0.000e+0
Identity = 582/836 (69.62%), Postives = 669/836 (80.02%), Query Frame = 0
Query: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDAKFTFLRSSRSVLDLCAAPGGWMQVAVERVPVGSLVIGVDLDPIRPIRGAIGIQEDITQSKCRASIKRLLSENGSRAFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATEFLAPKGTFITKVFSAFSVSMVNYFVDEWRFKVCVFAESMRFMSLIQVFRSQDYTAVLYCLRQLFEKVEVDKPSASRSASAEIYVVAFKYKAPAKIDPRLLDFKHLFQGGKEPAKVIDVLRTTKAKRHRDGYEDGATILRKVCSASDFVWSDAPLDILGSVTSISFDGSECSPIKEHALTTEEVKSLCDDLRVLGKQDFKYLLKWRMNIRKALSPSKAAVAATTKVDSESKTDEDEAEDEDQKVLNEMEEMTYAMDRKKKRAKKVLSKRRAKDKARKATGMQVDVMEDGYTDHDLFSLSSIKGKRDLVAVEDTENEEEINKVVDSDDEDTGAAGQDDSQSDLDSDEERKRYDEQLEDFLDQAYERFVARKEGSTKQRKRLRQNYAKDGESLEDGDDDNVVHSDQDSDNERPAQEANPLVVPLDGDEATQEEIAAKWFSQDVFADEDEHEDMDKDDSEDELEVVRP---VKKPP---------SPEKGTKKTTQQTQASKTKDDFEIVPAPET-DSSDDSSSDESEEDVETKAEILAMAKKMLRKKTRETMLDDAYNKYMFHDDGLPKWFVDEEKKHSQPIKPVTKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMRTLEKVRKKANSISDLPDINERSKTKMIDQLYKKAAPKRPKRELVVAKKGVQVKAGKGKLLVDRRMKKDARA 823
MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLD+KF FLRS+RSVLDLCAAPGGWMQVAVERVPVGS VIGVDLDPIRPIRGAI IQEDIT KCRA++K L++ENG +AFDLVLHDGSPNVGGAWAKEAT QNALVIDSVKLA E LAPKGTF+TKVF RSQDY+AV+YCL+QLFEKVEVDKP ASRSASAEIYV+ F+YKAPAKIDPRLLD KHLF+ GK+P KV+DVLR TK KRHRDGYEDG T LRKV SA+DF+WS+APL+ILGSVT+I+F+ PIK+H +TTEEVK+LCDDLRVLGKQDFK+LLKWRM++RKALSPS+ + +A+ +T ++ EDEDQKVLNEMEE+TYAM+RKKKRAKK+L KRRAKDKARKA GMQVD DGYTD +LFSLSSIKGK+DLVAV++ E ++E + SD+E++ D + S+ DSDEER+RYDEQ+E LD+AYE+FV +KEG KQRKR +QN +D + EDG+DD+ +HSDQDSDN+R +E NPLVVPL D TQEEIAAKWFSQDVFA++DE ED+ DS+DE+++ P +K+ PEK T Q Q SK+ +DFEIVPAP T S SS D E+++ETKAEILA AKKMLRKK RE +LDDAYNKYMFHD GLPKWFVDEEKKH QPIKPVTKEEVAAMRAQFKEIDARPAKKVA+AKARKKR R LEKVRKKANSISD DI++RSK KMI+QLY KA PKRPK+E VV+KKGVQVKAGKGK+LVDRRMKKDAR+
Sbjct: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDSKFGFLRSARSVLDLCAAPGGWMQVAVERVPVGSFVIGVDLDPIRPIRGAIAIQEDITTPKCRAAVKNLMAENGCKAFDLVLHDGSPNVGGAWAKEATGQNALVIDSVKLAAELLAPKGTFVTKVF-----------------------------------RSQDYSAVVYCLKQLFEKVEVDKPLASRSASAEIYVLGFRYKAPAKIDPRLLDVKHLFERGKDPPKVVDVLRGTKQKRHRDGYEDGDTTLRKVSSAADFIWSEAPLEILGSVTTITFEDPASLPIKDHNMTTEEVKALCDDLRVLGKQDFKHLLKWRMHVRKALSPSQKSTSAS------KETGDEMEEDEDQKVLNEMEELTYAMERKKKRAKKLLVKRRAKDKARKALGMQVDATLDGYTDQELFSLSSIKGKKDLVAVDNNEYDDEAGEAGTSDNEESHDEAYDGTSSNADSDEERRRYDEQVEQLLDEAYEQFVVKKEGKAKQRKRAKQN--QDDQLFEDGNDDDAIHSDQDSDNDRGVREVNPLVVPLVEDMPTQEEIAAKWFSQDVFAEDDEEEDLGTVDSDDEMQLDGPGESLKRKADDGLKEQLRGPEKKAASTLQHAQVSKSNEDFEIVPAPATDSSDSSSSDDSDEDEIETKAEILAYAKKMLRKKQREEILDDAYNKYMFHDVGLPKWFVDEEKKHYQPIKPVTKEEVAAMRAQFKEIDARPAKKVAEAKARKKRATFRKLEKVRKKANSISDQADISDRSKRKMIEQLYSKATPKRPKKEYVVSKKGVQVKAGKGKVLVDRRMKKDARS 793
BLAST of DCAR_001567 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4D9BXQ6 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1114.37 bits (2881), Expect = 0.000e+0
Identity = 570/828 (68.84%), Postives = 661/828 (79.83%), Query Frame = 0
Match: A0A4D9BXQ6 (Putative rRNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_03163} (2.1.1.- {ECO:0000256|HAMAP-Rule:MF_03163}) (2'-O-ribose RNA methyltransferase SPB1 homolog {ECO:0000256|HAMAP-Rule:MF_03163}))
HSP 1 Score: 1114.37 bits (2881), Expect = 0.000e+0
Identity = 570/828 (68.84%), Postives = 661/828 (79.83%), Query Frame = 0
Query: 1 MGKVKGKHRLDKYYHLAKEHGYRSRAAWKLVQLDAKFTFLRSSRSVLDLCAAPGGWMQVAVERVPVGSLVIGVDLDPIRPIRGAIGIQEDITQSKCRASIKRLLSENGSRAFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATEFLAPKGTFITKVFSAFSVSMVNYFVDEWRFKVCVFAESMRFMSLIQVFRSQDYTAVLYCLRQLFEKVEVDKPSASRSASAEIYVVAFKYKAPAKIDPRLLDFKHLFQGGKEPAKVIDVLRTTKAKRHRDGYEDGATILRKVCSASDFVWSDAPLDILGSVTSISFDGSECSPIKEHALTTEEVKSLCDDLRVLGKQDFKYLLKWRMNIRKALSPSKAAVAATTKVDSESKTDEDEAEDEDQKVLNEMEEMTYAMDRKKKRAKKVLSKRRAKDKARKATGMQVDVMEDGYTDHDLFSLSSIKGKRDLVAVEDTENEEEINKVVDSDDEDTGAAGQDDSQSDLDSDEERKRYDEQLEDFLDQAYERFVARKEGSTKQRKRLRQNYAKDGESLEDGDDDNVVHSDQDSDNERPAQEANPLVVPLDGDEATQEEIAAKWFSQDVFADEDEHEDMDKDDSEDELEVVRPVKKPPSPEKGTKKT----TQQTQASKTKDDFEIVPAPET-DSSDDSSSDESEEDVETKAEILAMAKKMLRKKTRETMLDDAYNKYMFHDDGLPKWFVDEEKKHSQPIKPVTKEEVAAMRAQFKEIDARPAKKVAQAKARKKRVAMRTLEKVRKKANSISDLPDINERSKTKMIDQLYKKA-APKRPKRELVVAKKGVQVKAGKGKLLVDRRMKKDAR 822
MGKVKGKHRLDKYYH AKEHGYRSRAAWKLVQLDAKF FL SSRSVLDLCAAPGGWMQV VERVPVGSLV+GVDLDPIRP+RGA+ +QEDIT KCRA++KR+++EN AFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATE LAPKG F+TKVF RSQDYTAVLYCLRQLFEKVEVDKP+ASRSASAEIYV+ KYKAP+KIDPRLLDFKHLFQGGKEP KV+DVLR TK KRHRDGYEDG T LRK+ +AS F+WSD PL+ILGSVTSI+FD + P+K+H TTEEVK+LC+DLRVLGKQDFK+LLKWR+ +RKALSPS+ +A + V+ ESK DEDE K+LNEMEE+T AMDRKKKR KK+++KR AKDKARKA G Q+D +EDGY D +LFSLSSIK K+DLVAV++ E +++ +V +S+ E G A ++ S SDLDS+EERKRYDEQ+E+ LD+AYERF+ +K+GSTKQRKR +Q+Y KD E LE GDDD V+HSDQDSDNE +EANPL+VPL DE TQEEIAAKWFSQDVF D DEHE + DDSEDE++V PVK K T + +Q +A K D FE+VPAP T S + ++ +ETKAEILA AKKML KK RE M+DDAYNKYMFHDDGLPKWF+DEEKKH P+KPVTKEE+AAM+AQFKEI+ARPAKKVA+AKARKKR A + LEKVRKKAN+ISD DI++RSK +MI+ LYKKA A K+P++E VVAKKGVQVK GKGK++VDRRMKKDAR
Sbjct: 1 MGKVKGKHRLDKYYHFAKEHGYRSRAAWKLVQLDAKFRFLNSSRSVLDLCAAPGGWMQVCVERVPVGSLVVGVDLDPIRPVRGAVSLQEDITDPKCRAAVKRVMAENACSAFDLVLHDGSPNVGGAWAKEATSQNALVIDSVKLATELLAPKGNFVTKVF-----------------------------------RSQDYTAVLYCLRQLFEKVEVDKPAASRSASAEIYVIGLKYKAPSKIDPRLLDFKHLFQGGKEPPKVVDVLRGTKQKRHRDGYEDGDTTLRKMSTASQFIWSDNPLEILGSVTSINFDDPDSLPLKDHTQTTEEVKALCEDLRVLGKQDFKHLLKWRILMRKALSPSEKTTSAPSSVEEESKIDEDE------KLLNEMEELTNAMDRKKKREKKLVAKRLAKDKARKALGKQMDAIEDGYIDMELFSLSSIKEKKDLVAVDNNEFDDDAGEVGNSESESEGDA-EESSHSDLDSEEERKRYDEQVENLLDEAYERFLTKKDGSTKQRKRSKQDY-KD-EQLE-GDDDTVLHSDQDSDNEMGDREANPLMVPLAEDELTQEEIAAKWFSQDVFMDGDEHEKLGDDDSEDEMQVDLPVKPLRVSAKKTNASPEQPVRQKKADKVDDGFEVVPAPATDSDDSSSDESDDDDSIETKAEILACAKKMLSKKQREHMIDDAYNKYMFHDDGLPKWFLDEEKKHRVPVKPVTKEEIAAMKAQFKEINARPAKKVAEAKARKKRAAYKKLEKVRKKANTISDQADISDRSKGRMIESLYKKATATKKPQKEYVVAKKGVQVKGGKGKVIVDRRMKKDAR 783
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7BKF2 | E-Value: 0.000e+0, PID: 70.88 | Putative rRNA methyltransferase {ECO:0000256|HAMAP... [more] |
| A0A6I9TV16 | E-Value: 0.000e+0, PID: 71.55 | Putative rRNA methyltransferase {ECO:0000256|HAMAP... [more] |
| A0A834G5L6 | E-Value: 0.000e+0, PID: 72.22 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7126... [more] |
| A0A2R6RHC7 | E-Value: 0.000e+0, PID: 70.22 | Putative rRNA methyltransferase {ECO:0000256|HAMAP... [more] |
| A0A2G9H4F7 | E-Value: 0.000e+0, PID: 69.75 | Putative rRNA methyltransferase {ECO:0000256|HAMAP... [more] |
| A0A7J0ET76 | E-Value: 0.000e+0, PID: 68.66 | Putative rRNA methyltransferase {ECO:0000256|HAMAP... [more] |
| A0A2C9W0V9 | E-Value: 0.000e+0, PID: 68.05 | Putative rRNA methyltransferase {ECO:0000256|HAMAP... [more] |
| A0A4S4EWG3 | E-Value: 0.000e+0, PID: 67.34 | Putative rRNA methyltransferase {ECO:0000256|HAMAP... [more] |
| A0A6P6WE36 | E-Value: 0.000e+0, PID: 69.62 | Putative rRNA methyltransferase {ECO:0000256|HAMAP... [more] |
| A0A4D9BXQ6 | E-Value: 0.000e+0, PID: 68.84 | Putative rRNA methyltransferase {ECO:0000256|HAMAP... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |