DCAR_003624

Resource Type: 
Polypeptide
Name: 
DCAR_003624
Identifier: 
DCAR_003624.mRNA-protein
Sequence: 
MKAMKTIEDLIEEAKIRTVWWALCIFSVSYFLTHTSKSMWMNVPISILIV
CGLRILCNEVEFRWKVRNIRRQTYLSHLEKKQLSVNDSRLSNSPPPPKWK
RKIDSPVVEAAMDDFVKKLLQDFVVDLWYSDITPDKEAPELIHAVVMDVL
GEVSGRVKEINLVELLTRDIVDLIGKNLDLFRRNQAAIGMEVMGTLSSEE
RDERLKHHLLASKELHPALISPECEYKVLQRLTGALLAVALRPREAQCPL
VRCIARELVTCLVLQPLINLASPAYINELIEYILTALKDVSIKQIGLGQS
PNVEGHKGDHVITGDQHHVEAATNIATSSQSKGTDMTLSRYETAKESVSD
GSENSITNTSHNEAMHPRSAEWARVLEAATQRRTEVLMPENLENMWAIGR
NYKKKVQKLAAAGGQSPLIQGSDSSNALSTNLDKEISAQKAEAFTRMENQ
PLTPAHSRPPIDSRPSNQISSATLNTPTLNKVVSLKGNRIVNESENSTSS
IASGNKNKMTRSNSTPDLNTEPVMKTDSICKSGGSVISEFCDKDLSSTSQ
ATNAKSALNMVSSSEGQQAVKLRCRVVGAYFEKLGSKSFAVYSIAVTDID
GITWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCI
QLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSPSMMKSLAVNVDD
AMDDIVRQFKGVSDGLIRKVASPTSVPEPASSAYGRNLSLKEDEINKLNL
RRDTADSINSFSDEEGDKSTNLHGKDSGYDIQTNGWHSDNELNSKEFPPR
VVTRSDDFRNISSEEKAFSTLQSELSSLRASPGVKSPLTPGQLDDPIGVP
QEWTPPNLSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLMMEDAIDD
WLLMQIHWLRRDDTIAQGIRWIQDVLWPGGKFFLKLNIRSKADDNETNDI
SSQSTSLSASSNTSKPGSFELQLEAARRASNVKKMILSELLFPLMF*
Sequence Length: 
997
Sequence Checksum: 
f7380b324f733315e9943b5b5bd6b5e5
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, DCAR_003624, derives from mRNA, DCAR_003624.
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Blast Results: 
The following BLAST results are available for this feature:
BLAST of DCAR_003624 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_003624 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZAB1 ((Uncharacterized protein {ECO:0000313|EMBL:MPA40949.1}))

HSP 1 Score: 1308.12 bits (3384), Expect = 0.000e+0
Identity = 666/994 (67.00%), Postives = 771/994 (77.57%), Query Frame = 0
 
Query:    1 MKAMKTIEDLIEEAKIRTVWWALCIFSVSYFLTHTSKSMWMNVPISILIVCGLRILCNEVEFRWKVRNIRRQTYLSHLEKKQLSVNDSRLSNSPPPPKWKRKIDSPVVEAAMDDFVKKLLQDFVVDLWYSDITPDKEAPELIHAVVMDVLGEVSGRVKEINLVELLTRDIVDLIGKNLDLFRRNQAAIGMEVMGTLSSEERDERLKHHLLASKELHPALISPECEYKVLQRLTGALLAVALRPREAQCPLVRCIARELVTCLVLQPLINLASPAYINELIEYILTALKDVSIKQIGLGQSPNVEGHKGDHVITGDQHHVEAATNIATSSQSKGTDMTLSRYETAKESVSDGSENSITNTSHNEAMHPRSAEWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKVQKLAAAGGQSPLIQGSDSSNALSTNLDKEISAQKAEAFTRMENQPLTPAHSRPPIDSRPSNQISSATLNT----PTLNKVVSLKGNRIVNESENSTSSIASGNKNKMTRSNSTPDLNTEPVMKTDSICKSGGSVISEFCDKDLSSTSQATNAKSALNMVSSSEGQQAVKLRCRVVGAYFEKLGSKSFAVYSIAVTDIDGITWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSPSMMKSLAVNVDDAMDDIVRQFKGVSDGLIRKVASP-TSVPEPASSAYGRNLSLKEDEINKLNLRRDTADSINSFSD-EEGDKSTNLHGKDSGYDIQTNGWHSDNELNSKEFPPRVVTRSDDFRNISSEEKAFSTLQSELSSLRASPGVKSPLTPGQLDDPIGVPQEWTPPNLSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLMQIHWLRRDDTIAQGIRWIQDVLWPGGKFFLKLNIRSKADDNETNDISSQSTSLSASSNTSKPGSFELQLEAARRASNVKKMILS 988
            MKAM++++DLIEEAK+RTVWW LCIF++SYFLTHTSKSMWMN+PISIL+V  LRIL NEVEFRWKVR + +QTYLSHL KKQL+VNDSRLS SPPPPKWKRKIDSP+VEAAM++F+ KLL+DFVVDLWYSDITPDKEAPELIHA++MDVLGE+SGRVKEINLV+LLTRDIVDL+G +LDLFRRNQAAIG++VMG LSSEERDERLKHHL+ASKELHPALIS ECEYKVLQ+L G LLAV LR RE+QCPLVRCIAREL+TCLV+QP+++ ASP YINELIEYI    KD   K+ G  QS NV GH  DH +  +    + AT    SS ++GTDMTLSR    +E+    S N  +NT + E + PR A+WARVLEAAT RRTEVLMPENLENMW  GRNYK K+QK A AG Q+P+ +GS  +NA      +EIS  ++E  T ME++ L    +R P    P  Q+S  + +       LNK  S +G  +VNE +NSTS  ++GNK+++ RSNST  L  +P M+  S  + GG +ISEF   D    ++    KSA ++VS  EG    KLRCRV+GAYFEKLGSKSFAVYSIAVTD D  TWFVKRRYRNFERLHR LKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKS S+M+SLAVNVDDA+DDIVRQFKGVSDGL+RKV  P +S  E +SS  GRNLS    EINK    ++T +S  SFSD EEGDK      ++ G   Q NGWHSDNELNSK FPPRVV R  +FR++  E+K+ S ++ E  SL        P+T  QL+    VP EWTPPNLSVP+LNLVD VFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLL QI WLRR+D IAQGI+W+QDVLWP G FFLKLN RS+ DD + N  S QST+ S S+  SKPGSFE QLEAARRAS+VKKMI S
Sbjct:    1 MKAMESLQDLIEEAKVRTVWWGLCIFAISYFLTHTSKSMWMNIPISILLVSALRILFNEVEFRWKVRKVHQQTYLSHLAKKQLAVNDSRLSTSPPPPKWKRKIDSPIVEAAMEEFINKLLKDFVVDLWYSDITPDKEAPELIHAIIMDVLGEISGRVKEINLVDLLTRDIVDLVGNHLDLFRRNQAAIGVDVMGILSSEERDERLKHHLMASKELHPALISSECEYKVLQQLMGGLLAVVLRTRESQCPLVRCIARELLTCLVMQPVMDFASPGYINELIEYIFH--KDNGSKEGGDDQSSNVVGHNHDHAVGTNTVQKDEATLRNASSYNQGTDMTLSRINNQRETSVYASGNYFSNTYYEEPVQPRPADWARVLEAATHRRTEVLMPENLENMWTRGRNYKNKLQKNATAGIQAPVAKGSGINNA------EEISTHRSEISTLMEDKAL----ARLPPGLHPDTQLSDGSYDAVHLLQGLNKEPSAEGGCLVNELDNSTSLASNGNKSRLKRSNSTSALKVQPNMEKASTNEGGGPIISEFYSPDFGRQNEVHFVKSAPDVVSRGEGSHVPKLRCRVIGAYFEKLGSKSFAVYSIAVTDADKNTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSSSVMRSLAVNVDDAVDDIVRQFKGVSDGLMRKVVGPSSSPYESSSSISGRNLSWNAGEINKHIPWQNTMESAKSFSDNEEGDKDGT--HEEVGSSAQANGWHSDNELNSKGFPPRVVKRGVEFRSLDYEKKSGSEVEPESVSLAGYHAASFPVTSDQLE----VPPEWTPPNLSVPVLNLVDKVFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLRQIQWLRREDIIAQGIQWVQDVLWPDGMFFLKLNNRSEMDDCQPNQRSLQSTNFSTSTRVSKPGSFEQQLEAARRASDVKKMIFS 976    
BLAST of DCAR_003624 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9U3C2 ((uncharacterized protein LOC105169587 {ECO:0000313|RefSeq:XP_011088313.1}))

HSP 1 Score: 1257.66 bits (3253), Expect = 0.000e+0
Identity = 632/990 (63.84%), Postives = 759/990 (76.67%), Query Frame = 0
 
Query:    2 KAMKTIEDLIEEAKIRTVWWALCIFSVSYFLTHTSKSMWMNVPISILIVCGLRILCNEVEFRWKVRNIRRQTYLSHLEKKQLSVNDSRLSNSPPPPKWKRKIDSPVVEAAMDDFVKKLLQDFVVDLWYSDITPDKEAPELIHAVVMDVLGEVSGRVKEINLVELLTRDIVDLIGKNLDLFRRNQAAIGMEVMGTLSSEERDERLKHHLLASKELHPALISPECEYKVLQRLTGALLAVALRPREAQCPLVRCIARELVTCLVLQPLINLASPAYINELIEYILTALKDVSIKQIGLGQSPNVEGHKGDHVITGDQHHVEAATNIATSSQSKGTDMTLSRY-ETAKESVSDGSENSITNTSHNEAMHPRSAEWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKVQKLAAAGGQSPLIQGSDSSNALSTNLDKEISAQKAEAFTRMENQPLTPAHSRPPIDSRPSNQISSATLNTPTLNKVVSLKGNRIVNESENSTSSIASGNKNKMTRSNSTPDLNTEPVMKTDSICKSGGSVISEFCDKDLSSTSQATNAKSALNMVSSSEGQQAVKLRCRVVGAYFEKLGSKSFAVYSIAVTDIDGITWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSPSMMKSLAVNVDDAMDDIVRQFKGVSDGLIRKVA-SPTSVPEPASSAYGRNLSLKEDEINKLNLRRDTADSINSFSD-EEGDKSTNLHGKDSGYDIQTNGWHSDNELNSKEFPPRVVTRSDDFRNISSEEKAFSTLQSELSSLRASPGVKSPLTPGQLDDPIGVPQEWTPPNLSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLMQIHWLRRDDTIAQGIRWIQDVLWPGGKFFLKLNIRSKADDNETNDISSQSTSLSASSNTSKPGSFELQLEAARRASNVKKMILS 988
            KAM++++DL++E K+RTVWW LCIF+VSYFLTHTSKSM MN+PI++L+V GLR+L NEVEFRWKVRN R+ +YLSHLEKKQLSVNDSRL++ PPP KWKRKIDSPVVEAA++DF+ KLLQDFVVDLWYSDITPDKEAPELIH++VMDVLGEVSGR+KE+NLV+LLTRD+VDLIG +LDLFRRNQA IG++VMGTLSSEERDERLKHHLLASKELHPALISPE EYKVLQRL G LLAV LRPREAQCPLVRCIAREL+TCLV+QP++N ASP YINELIEYI+ A  +   K +   QSPNV+GH  +H  + +          ++ S ++GTD+ L ++ +T  E  S GS + +++T  +E +H R AEWA+V EAATQRRTEVLMPENLENMW IGRNYKKK+QK AA G  +P + GS S      +L+ E++ QK E +  +E++       RP  D+R +         +  LN+ V  KG+  V+E E     +++ N+NK+ RSNST DL  +  ++   + K    +I+E+   D++  +  +   S+  MV   EG  A KLRCRV GAYFEK GSKSFAVYSIAVTD D  TWFVKRRYRNFERLHR LKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLS SSKNYSF KS S+M++LAVNVDDAMDDIVRQFKGVSDGL+ KVA SP+S  +  SS   RNLS   D+I KL +R+ T++SINSFSD +EGDK  N   +++    Q NGWHSDNEL SK FP RVV   +D  N+ SEE   S L+S  SS+   P     +T    +DP GVP EWTPPNLSVP+LNLVDNVFQLK+RGWLRRQVFWISKQILQL+MEDAIDDWLL QI WLRR+D IAQGIRW+QDVLWPGG FFL+L  +++ +D E    S Q+T   +   +S+PGSFE QLEAARRA++VKKMI +
Sbjct:    3 KAMESLQDLLDEVKLRTVWWVLCIFAVSYFLTHTSKSMLMNIPIAVLLVSGLRMLFNEVEFRWKVRNNRQLSYLSHLEKKQLSVNDSRLTSLPPPQKWKRKIDSPVVEAAIEDFISKLLQDFVVDLWYSDITPDKEAPELIHSIVMDVLGEVSGRLKELNLVDLLTRDVVDLIGDHLDLFRRNQAGIGVDVMGTLSSEERDERLKHHLLASKELHPALISPESEYKVLQRLMGGLLAVVLRPREAQCPLVRCIARELLTCLVMQPIMNFASPGYINELIEYIILAYNNEGSKDVVADQSPNVDGHNNEHRFSREHGQ-------SSESSNQGTDLALPQFNKTLPE--SGGSGDLVSSTMQDETIHARHAEWAKVFEAATQRRTEVLMPENLENMWTIGRNYKKKLQKKAAPGIHAPQVTGSVSVVLPRRDLETEVAKQKPEMYIEIEDKASLHLPPRPQQDTRSAGPSIDPLSRSQELNEKVFAKGSSSVHELEKIAGDVSNENRNKLKRSNSTSDLKVQSTLEDMFVTKGSAPIINEYYSADINKLNMHSLMSSSA-MVLRREG-HAPKLRCRVTGAYFEKHGSKSFAVYSIAVTDADNNTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSASSKNYSFAKSSSVMRTLAVNVDDAMDDIVRQFKGVSDGLMWKVAGSPSSSFDQGSSVTSRNLSWNADDIKKLAMRQSTSESINSFSDNDEGDKDVNHGEQEAEAANQGNGWHSDNELVSKGFPQRVVRHEEDVSNLESEEIHNSRLKSMSSSVSRYPESSLAITSVPQEDPTGVPPEWTPPNLSVPVLNLVDNVFQLKKRGWLRRQVFWISKQILQLIMEDAIDDWLLRQIQWLRREDVIAQGIRWVQDVLWPGGTFFLRLRSQAQPNDCEATRGSQQTTRQPSGMRSSQPGSFEQQLEAARRANDVKKMIFN 981    
BLAST of DCAR_003624 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RBY5 ((Sorting nexin-16 like {ECO:0000313|EMBL:PSS26080.1}))

HSP 1 Score: 1246.11 bits (3223), Expect = 0.000e+0
Identity = 640/996 (64.26%), Postives = 749/996 (75.20%), Query Frame = 0
 
Query:    1 MKAMKTIEDLIEEAKIRTVWWALCIFSVSYFLTHTSKSMWMNVPISILIVCGLRILCNEVEFRWKVRNIRRQTYLSHLEKKQLSVNDSRLSNSPPPPKWKRKIDSPVVEAAMDDFVKKLLQDFVVDLWYSDITPDKEAPELIHAVVMDVLGEVSGRVKEINLVELLTRDIVDLIGKNLDLFRRNQAAIGMEVMGTLSSEERDERLKHHLLASKELHPALISPECEYKVLQRLTGALLAVALRPREAQCPLVRCIARELVTCLVLQPLINLASPAYINELIEYILTALKDVSIKQIGLGQSPNVEGHKGDHVITGDQHHVEAATNIATSSQSKGTDMTLSRYETAKESVSDGSENSITNTSHNEAMHPRSAEWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKVQKLAAAGGQSPLIQGSDSSNALSTN-LDKEISAQK------AEAFTRMENQPLTPAHSRPPIDSRPSNQISSATLNTPTLNKVVSLKGNRIVNESENSTSSIASGNKNKMTRSNSTPDLNTEP-VMKTDSICKSGGSVISEFCDKDLSSTSQATNAKSALNMVSSSEGQQAVKLRCRVVGAYFEKLGSKSFAVYSIAVTDIDGITWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSPSMMKSLAVNVDDAMDDIVRQFKGVSDGLIRKVASPTSVPEPASSAYGRNLSLKEDEINKLNLRRDTADSINSFSD-EEGDKSTNLHGKDSGYDIQTNGWHSDNELNSKEFPPRVVTRSDDFRNISSEEKAFSTLQSELSSLRASPGVKSPLTPGQLDDPIGVPQEWTPPNLSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLMQIHWLRRDDTIAQGIRWIQDVLWPGGKFFLKLNIRSKADDNETNDISSQSTSLSASSNTSKPGSFELQLEAARRASNVKKMIL 987
            M+ M T++DLIEEAK+RTV+W LCIF+VSYFL+HTSKSMWMN+PIS+L V  LR+L NEVEFRWKVR  ++QTYLSHLEKKQLSVND RLS SPPPPKWK KIDSPVVEA+M++FV KLLQDFV DLWYSDITPDKEAP+L+HAV+MDVLGE+SGR+KEINLV+LLTRD+VDL+G +LDLFRRNQAAIG++VMGTLS EERDERLKHHL+ASKELHPALISPECEYKVLQR+ G LLA+ LRPREAQCPLVRCIA+ELVTCLV+QP++N A+PAYINELIEYI    KD   K+ G  QSPNV G   + VI  D    E  +    SS  +G D+  SR    KE   D SEN  +N S  E M PR A WARVLEAATQRRTEVLMPENLENMW  GRNYKK +QK AAA    P+++GS  S+A  T  L KE+S+Q+       E  T++  Q L+  +             ++    +  LNK  S+ G  +V++ + + S I  GNK  + RSNST  LN +P V KT +  +  G +ISEF   D    S+     SA +MV  SEG  + KLRCRV+GAYFEKLGSKSFAVYSIAVTD D  TWFVKRRYRNFERLHR LKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQL+KYLQDLLSIANVAEQHE+WDFLS SSKNYSF KS S+M++LAVNVDDA+DDIVRQFKGVSDGL++KV   +S  E + +   RNLS   D+I+K    R T +S NS SD EEGDK      ++ G  +Q NGWHSDNELNSK FPPRV+ RS+ FR+I S +K  S   S L SL   P     +T   L+D IGVP EWTPPNLS+P+LNLVD +FQL RRGWLRRQVFW+SKQILQLMMEDAIDDWLL QI WLRRDD IAQGI+W+Q+VLWP G+FFL+L  +SK DD + +  S ++T  S  S  S PGSFE QLEAARRAS++KKMI 
Sbjct:    1 MQPMATVQDLIEEAKLRTVYWVLCIFAVSYFLSHTSKSMWMNIPISVLFVSALRVLFNEVEFRWKVRKAQQQTYLSHLEKKQLSVNDYRLSASPPPPKWKGKIDSPVVEASMEEFVNKLLQDFVTDLWYSDITPDKEAPKLMHAVIMDVLGEISGRLKEINLVDLLTRDVVDLVGDHLDLFRRNQAAIGVDVMGTLSLEERDERLKHHLMASKELHPALISPECEYKVLQRIMGGLLALVLRPREAQCPLVRCIAQELVTCLVMQPIMNFANPAYINELIEYIFLVTKDDGNKETGDDQSPNVVGRNSEDVIAPDDVPNEFTSRKNRSSYDQGIDLMPSRINNQKEISLDASENLNSNLSGEEPMQPRPAGWARVLEAATQRRTEVLMPENLENMWTKGRNYKKNIQKSAAA----PVMKGSGESSAEPTKILLKEMSSQRLVISSATEISTKLCTQTLSDGN-------------NNLVHLSHGLNKHQSIGGAPLVDKLKGTASPITCGNKGCLKRSNSTSALNVQPNVEKTATSGEVDGPIISEFYTPDFGRRSEVYPVNSASDMVLHSEGIHSHKLRCRVIGAYFEKLGSKSFAVYSIAVTDADKNTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLNKYLQDLLSIANVAEQHELWDFLSASSKNYSFEKSSSVMRTLAVNVDDAVDDIVRQFKGVSDGLMQKVVGSSSFQEGSLAIPSRNLSWNPDDISKHLSWRSTTESANSGSDIEEGDKDGTRGHEEVGCSVQANGWHSDNELNSKGFPPRVIKRSEKFRSIDSGKKRGSETDSLLFSLGGYPPACFTVTSNHLEDAIGVP-EWTPPNLSIPVLNLVDKIFQLNRRGWLRRQVFWMSKQILQLMMEDAIDDWLLRQIQWLRRDDVIAQGIQWVQNVLWPDGRFFLRLRTQSKMDDCQPDQRSFETT--SQRSQVSNPGSFEQQLEAARRASDIKKMIF 976    
BLAST of DCAR_003624 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HPC7 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5954730.1}))

HSP 1 Score: 1230.31 bits (3182), Expect = 0.000e+0
Identity = 628/1010 (62.18%), Postives = 751/1010 (74.36%), Query Frame = 0
 
Query:    1 MKAMKTIEDLIEEAKIRTVWWALCIFSVSYFLTHTSKSMWMNVPISILIVCGLRILCNEVEFRWKVRNIRRQTYLSHLEKKQLSVNDSRLSNSPPPPKWKRKIDSPVVEAAMDDFVKKLLQDFVVDLWYSDITPDKEAPELIHAVVMDVLGEVSGRVKEINLVELLTRDIVDLIGKNLDLFRRNQAAIGMEVMGTLSSEERDERLKHHLLASKELHPALISPECEYKVLQRLTGALLAVALRPREAQCPLVRCIARELVTCLVLQPLINLASPAYINELIEYILTALKD------------------VSIKQIGLGQSPNVEGHKGDHVITGDQHHVEAATNIATSSQSKGTDMTLSRYETAKESVSDGSENSITNTSHNEAMHPRSAEWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKVQKLAAAGGQSPLIQGSDSSNALST-NLDKEISAQKAEAFTRMENQPLTPAHSRPPI--DSRPSNQISSATLNTPTLNKVVSLKGNRIVNESENSTSSIASGNKNKMTRSNSTPDLNTEPVMKTDSICKSGGSVISEFCDKDLSSTSQATNAKSALNMVSSSEGQQAVKLRCRVVGAYFEKLGSKSFAVYSIAVTDIDGITWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSPSMMKSLAVNVDDAMDDIVRQFKGVSDGLIRKVASPTSVPEPASSAYGRNLSLKEDEINKLNLRRDTADSINSFSD-EEGDKSTNLHGKDSGYDIQTNGWHSDNELNSKEFPPRVVTRSDDFRNISSEEKAFSTLQSELSSLRASPGVKSPLTPGQLDDPIGVPQEWTPPNLSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLMQIHWLRRDDTIAQGIRWIQDVLWPGGKFFLKLNIRSKADDNETNDISSQSTSLSASSNTSKPGSFELQLEAARRASNVKKMILS 988
            MKA +T++DLIEEAK+RTV+WAL IF+V+YFLTHTSKSM MN+PISIL V  LRIL NEVEFRWKVR +R+QTYLSHLEKKQLSVNDS LS  PPPPKWKRK+DSP+VEAAM++FV KLLQDFV DLWYSDITPDKEAP+LI A++MDVLGE+SGRVKEINL++LL RD+VDL+G +LDLFRRNQAAIG++VMGTLSSEERDERLKHHL+ASKELHPALISPECEYKVLQR  GA+LAV LRPREAQCPLVRCIARELVTCLV+QP+++ ASP YINELIEY+  A+KD                     K+ G  QSPNV  H  DH +  D   VE  +    SS ++ TD  +SR +  KE   D  EN  +N    E  H R A+WAR+LE ATQRRTE LMPENL+NMW IGRNYKKK+QK+AA G Q+P+ +GS   NA  T +  K++S  +    + +E++   P    P +  ++R SN+ ++    +  +NK  S+    +  E +++    ASGNK  + RSNST  L  +P M+     + GG +ISEF   D    ++   AKS  ++V  SEG    KLRCRVVGAYFEKLGSKSFAVYSIAVTD D  TWFVKRRY NFERLHR LKDIPNYTLHLPPKRIFSSSTEDAFV QRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFG+S S+M++LAVNVDDAMDDI+RQFKGVS GL+RKV   +S+P    S     LS   DEI+     ++T +S  S SD E+GDK      ++ G  +Q +GWHSDNELNSK FPPRVV   + FR++ SE+K  S  +S   SL   P ++ P+T    D+P+G+P EWTPP LSVP+LNLVD +FQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLL QI  LRRD+ IAQG+RWIQ+VLWP G FF +LN +S+ +D + N  S Q+T  S  +  SKPGSFE +LEAARRAS+VKK+IL+
Sbjct:    1 MKAAETLQDLIEEAKLRTVYWALFIFAVAYFLTHTSKSMLMNIPISILFVSALRILFNEVEFRWKVRKVRQQTYLSHLEKKQLSVNDSWLSTLPPPPKWKRKVDSPIVEAAMEEFVNKLLQDFVTDLWYSDITPDKEAPQLIRAIIMDVLGEISGRVKEINLIDLLARDVVDLVGDHLDLFRRNQAAIGVDVMGTLSSEERDERLKHHLMASKELHPALISPECEYKVLQRFMGAVLAVVLRPREAQCPLVRCIARELVTCLVMQPIMDFASPGYINELIEYVFLAIKDDGSKEAGEDQSPNLVSHNSDCKEAGEDQSPNVVSHNSDHAVAADVAPVEFTSRKNASSYNQVTDSMVSRTDNHKEISPDALENLNSNLFGEE--HSRPADWARILEVATQRRTETLMPENLDNMWTIGRNYKKKIQKIAAGGLQAPMTKGSGIYNAEHTKSSGKQMSTHRPVISSAVEDK--VPVQLPPKLHTETRLSNRNNNVIDLSRGINKEQSIGKAPLFGELKDTAYLTASGNKGGLKRSNSTSALKVQPNMEKTFTREGGGPIISEFYSPDFCRHTELHTAKSVSDIVFRSEGILTPKLRCRVVGAYFEKLGSKSFAVYSIAVTDADRNTWFVKRRYSNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVLQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGRSSSVMRTLAVNVDDAMDDIMRQFKGVSGGLMRKVVGSSSLPYEEGS-----LSWNADEISNHLSWQNTTESAKSLSDNEDGDKDGTRGHEEVGSSVQASGWHSDNELNSKGFPPRVVKHCERFRSLDSEKKHGSEAESLSVSLGGYPAIRFPITS---DNPVGMPLEWTPPKLSVPVLNLVDKIFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLRQIQLLRRDEVIAQGVRWIQEVLWPDGTFFTRLNTQSQMNDCQPNQTSFQTT--SRHTKASKPGSFEERLEAARRASDVKKIILN 996    
BLAST of DCAR_003624 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9GUJ6 ((Uncharacterized protein {ECO:0000313|EMBL:PIN08680.1}))

HSP 1 Score: 1229.54 bits (3180), Expect = 0.000e+0
Identity = 625/996 (62.75%), Postives = 753/996 (75.60%), Query Frame = 0
 
Query:    2 KAMKTIEDLIEEAKIRTVWWALCIFSVSYFLTHTSKSMWMNVPISILIVCGLRILCNEVEFRWKVRNIRRQTYLSHLEKKQLSVNDSRLSNSPPPPKWKRKIDSPVVEAAMDDFVKKLLQDFVVDLWYSDITPDKEAPELIHAVVMDVLGEVSGRVKEINLVELLTRDIVDLIGKNLDLFRRNQAAIGMEVMGTLSSEERDERLKHHLLASKELHPALISPECEYKVLQRLTGALLAVALRPREAQCPLVRCIARELVTCLVLQPLINLASPAYINELIEYILTALKDVSIKQIGLGQSPNVEGHKGDHVITGDQHHVEAATNI--ATSSQSKGTDMTLSRYETAKESVSDGSENSITNTSHNEAMHPRSAEWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKVQKLAAAGGQSPLIQGSDSSNALSTNLDKEISAQKAEAFTRMENQPLTPAHSRPPIDSRPSNQISSATLNTPTLNKVVSLKGNRIVNESENSTSSIASGNKNKMTRSNSTPDLNTEPVMKTDSICKSGGSVISEFCDKDLSSTSQATNAKSALN---MVSSSEGQQAVKLRCRVVGAYFEKLGSKSFAVYSIAVTDIDGITWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSPSMMKSLAVNVDDAMDDIVRQFKGVSDGLIRKVASPTSVPEPASSAYGRNLSLKEDEINKLNLRRDTADSINSFSD-EEGDKSTNLHGK---DSGYDIQTNGWHSDNELNSKEFPPRVVTRSDDFRNISSEEKAFSTLQSELSSLRASPGVKSPLTPGQLDDPIGVPQEWTPPNLSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLMQIHWLRRDDTIAQGIRWIQDVLWPGGKFFLKLNIRSKADDNETNDISSQSTSLSASSNTSKPGSFELQLEAARRASNVKKMILS 988
            K M+++EDLIEEAK+RTVWW LCIF+VSYFLTHTSKSM MN+PI+IL+V GLRIL NEVEFRWKVRN R ++YLSHLEKKQLSVNDSRL+ +PPP KWKRK+DSPVVEAAM+DF+ KLL DFV+DLWYSDITPDKEAPELI A++MDVLGEVS R+KE+NLV++LTRD+VDLIG +LDLFRRNQAAIG++VMGTLSS+ERDERLKHHLLASK+LHPALISP+CEYKVLQRL G LLAV LRPREAQCPLVRCIAREL+TCLVLQP++NLASP YINELIEYI+ A  +   K +  GQSP +E +K +  ++G +H     +N+     S ++ T ++ ++ +  +   S GS + +++T  +E +H R+AEWA+V +AATQRRTEVLMPENLENMWAIGRNYKKK+QK    G Q+ ++  S S          E+  QK E    +E +       RP  D+RP++    A      L K V LKG+  ++E EN+ + ++  N+NK+ RSNST DL  +   +   + K    +I+E+ + D +      NA+S +N    +   EG QA KL+CRVVGAYFEKLGS SFAVYSIAVTD D  TWFVKRRYRNFERLHR LKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLS SSKNYSFGKS S+M++LAVNVDDA+DDIVRQFKGVSDGL+ KVA+P S  + ASS  GRNLS   D++NKL +R+   +S+NSFSD +EGDK   +HG+   ++   IQ+NGWHSD E NSK FPP VV + D+  N+ SEE     L+SE SS+   P     LT    +D   VP EWTPPNLSVP+LNLVDNVFQL RRGWLRRQVFWISKQILQL+MEDAIDDWLL QI WLR +D IAQGIRW+QDVLWP G FFL+L  + + +D E   +  Q T        S  GSFE QLEAARRAS+VKKM+ +
Sbjct:    3 KVMESLEDLIEEAKLRTVWWILCIFAVSYFLTHTSKSMLMNIPIAILLVSGLRILFNEVEFRWKVRNDRPKSYLSHLEKKQLSVNDSRLTTTPPPQKWKRKVDSPVVEAAMEDFISKLLHDFVIDLWYSDITPDKEAPELIRAIIMDVLGEVSARIKEVNLVDMLTRDVVDLIGDHLDLFRRNQAAIGVDVMGTLSSKERDERLKHHLLASKQLHPALISPDCEYKVLQRLMGGLLAVVLRPREAQCPLVRCIARELLTCLVLQPIMNLASPGYINELIEYIILAYNNEGSKDVATGQSPKMEVYKHEPTVSG-EHGRSGDSNLRKIVPSNNQETGLSFTQLDHKRMLESSGSGHPLSSTVQDEPIHARNAEWAKVFDAATQRRTEVLMPENLENMWAIGRNYKKKLQKKGIPGNQAAVVTDSVS----------EVPKQKPETHVGIEEKASMQLPPRPQQDTRPTDFSIDALSRPQELKKEVFLKGSSSIHELENTAAVVSLENRNKLKRSNSTSDLKVQSNPEDMFVSKGHAPIINEYYNADFNK----HNAQSLMNSSGTILRREGMQAPKLKCRVVGAYFEKLGSTSFAVYSIAVTDADKNTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSASSKNYSFGKSSSVMRTLAVNVDDAVDDIVRQFKGVSDGLLWKVAAPASSFDQASSVTGRNLSWNADDVNKLTMRQSAPESVNSFSDNDEGDKDV-IHGEQEVEAVSVIQSNGWHSDYEPNSKGFPPGVV-KHDENVNLDSEEIHNLRLKSESSSVSRCPESSLALTSVPQEDATRVPPEWTPPNLSVPVLNLVDNVFQLNRRGWLRRQVFWISKQILQLVMEDAIDDWLLRQIQWLRSEDVIAQGIRWVQDVLWPDGTFFLRLRAQGQVNDCEAC-LGPQQTRQPGGMRGSHLGSFEQQLEAARRASDVKKMLFN 980    
BLAST of DCAR_003624 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9G705 ((Uncharacterized protein {ECO:0000313|EMBL:PIN01094.1}))

HSP 1 Score: 1228.77 bits (3178), Expect = 0.000e+0
Identity = 624/994 (62.78%), Postives = 749/994 (75.35%), Query Frame = 0
 
Query:    2 KAMKTIEDLIEEAKIRTVWWALCIFSVSYFLTHTSKSMWMNVPISILIVCGLRILCNEVEFRWKVRNIRRQTYLSHLEKKQLSVNDSRLSNSPPPPKWKRKIDSPVVEAAMDDFVKKLLQDFVVDLWYSDITPDKEAPELIHAVVMDVLGEVSGRVKEINLVELLTRDIVDLIGKNLDLFRRNQAAIGMEVMGTLSSEERDERLKHHLLASKELHPALISPECEYKVLQRLTGALLAVALRPREAQCPLVRCIARELVTCLVLQPLINLASPAYINELIEYILTALKDVSIKQIGLGQSPNVEGHKGDHVITGDQHHVEAATNI--ATSSQSKGTDMTLSRYETAKESVSDGSENSITNTSHNEAMHPRSAEWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKVQKLAAAGGQSPLIQGSDSSNALSTNLDKEISAQKAEAFTRMENQPLTPAHSRPPIDSRPSNQISSATLNTPTLNKVVSLKGNRIVNESENSTSSIASGNKNKMTRSNSTPDLNTEPVMKTDSICKSGGSVISEFCDKDLSSTSQATNAKSALN---MVSSSEGQQAVKLRCRVVGAYFEKLGSKSFAVYSIAVTDIDGITWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSPSMMKSLAVNVDDAMDDIVRQFKGVSDGLIRKVASPTSVPEPASSAYGRNLSLKEDEINKLNLRRDTADSINSFSD-EEGDKSTNLHG-KDSGYDIQTNGWHSDNELNSKEFPPRVVTRSDDFRNISSEEKAFSTLQSELSSLRASPGVKSPLTPGQLDDPIGVPQEWTPPNLSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLMQIHWLRRDDTIAQGIRWIQDVLWPGGKFFLKLNIRSKADDNETNDISSQSTSLSASSNTSKPGSFELQLEAARRASNVKKMILS 988
            K M+++EDLIEEAK+RTVWW LCIF+VSYFLTHTSKSM MN+PI+IL+V GLRIL NEVEFRWKVRN R ++YLSHLEKKQLS NDSRL+ +PPP KWKRK+DSPVVEAAM+DF+ KLL DFV+DLWYSDITPDKEAPELI A++MDVLGEVSGR+KE+NLV+LLTRD+VDLIG +LDLFRRNQAAIG++VMGTLSS+ERDERLKHHLLASKELHPALISPECEYKVLQRL G LLAV LRPREAQCPLVRCIAREL+TCLVLQP++NLASP YINELIEYI+ A  +   K +  GQSP +E +K +  ++G+  H    +N+     S ++ T ++ ++ +  +   S GS + +++T  +E +H R+AEWA+V +AATQRRTEVLMPENLENMW IGRNYKKK+QK    G Q+ ++  S S          E+  QK E    +E +       RP  D+RP++        +  L K V LKG+  ++E EN+ + ++  N+NK+ RSNST DL  +   +   + K    +I+E+ + D +      NA+S +N    +   EG QA KL+CRVVGAYFEKLGS SFAVYSIAVTD D  TWFVKRRYRNFERLHR LKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLS SSKNYSFGKS S+M++LAVNVDDA+DDIVRQFKGVSDGL+ KV +P S  + ASS  GRNLS   D++ KL +R+   +S+NSFSD +EGDK   +HG ++    IQ+NGWHSD E NSK FP  VV + D+  N+ SEE     L+SE SS+   P     LT    +D   VP EWTPPNLSVP+LNLVDNVFQL RRGWLRRQVFWISKQILQL+MEDAIDDWLL QI WLRR+D IAQGIRW+QDVLWP G FFL+L  + + +D E   +  Q T        S  GSFE QLEAARRAS+VKKM+ +
Sbjct:    3 KVMESLEDLIEEAKLRTVWWILCIFAVSYFLTHTSKSMLMNIPIAILLVSGLRILFNEVEFRWKVRNDRPKSYLSHLEKKQLSANDSRLTTTPPPQKWKRKVDSPVVEAAMEDFISKLLHDFVIDLWYSDITPDKEAPELIRAIIMDVLGEVSGRIKEVNLVDLLTRDVVDLIGDHLDLFRRNQAAIGVDVMGTLSSKERDERLKHHLLASKELHPALISPECEYKVLQRLMGGLLAVVLRPREAQCPLVRCIARELLTCLVLQPIMNLASPGYINELIEYIILAYNNEGFKDVATGQSPKMEVYKHEPTVSGEHGH-SGDSNLRKIIPSNNQETGLSFTQLDHKRMLESSGSGHPLSSTVQDEPIHARNAEWAKVFDAATQRRTEVLMPENLENMWTIGRNYKKKLQKKGIPGNQAAVVTDSVS----------EVPKQKPETHVGIEEKASMQLPPRPQQDTRPTDFSIDTLSRSQVLKKEVFLKGSSSIHELENTAAVVSHENRNKLKRSNSTSDLKIQSNPEDMFVSKGRAPIINEYYNADFNR----HNAQSLMNSSGTILRREGMQAPKLKCRVVGAYFEKLGSTSFAVYSIAVTDADNNTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSASSKNYSFGKSSSVMRTLAVNVDDAVDDIVRQFKGVSDGLLWKVGAPASSFDQASSVTGRNLSWNADDVTKLTMRQSAPESVNSFSDNDEGDKDV-IHGEQEVEAVIQSNGWHSDYEPNSKGFPHGVV-KHDENVNLDSEEIHNLRLKSESSSVSRYPESSLALTSVPQEDATRVPPEWTPPNLSVPVLNLVDNVFQLNRRGWLRRQVFWISKQILQLVMEDAIDDWLLRQIQWLRREDAIAQGIRWVQDVLWPDGTFFLRLRAQGQVNDCEAC-LGPQQTRQPGGMRGSHLGSFEQQLEAARRASDVKKMLFN 978    
BLAST of DCAR_003624 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RH82 ((Sorting nexin-16 like {ECO:0000313|EMBL:PSS29374.1}))

HSP 1 Score: 1226.85 bits (3173), Expect = 0.000e+0
Identity = 633/994 (63.68%), Postives = 744/994 (74.85%), Query Frame = 0
 
Query:    1 MKAMKTIEDLIEEAKIRTVWWALCIFSVSYFLTHTSKSMWMNVPISILIVCGLRILCNEVEFRWKVRNIRRQTYLSHLEKKQLSVNDSRLSNSPPPPKWKRKIDSPVVEAAMDDFVKKLLQDFVVDLWYSDITPDKEAPELIHAVVMDVLGEVSGRVKEINLVELLTRDIVDLIGKNLDLFRRNQAAIGMEVMGTLSSEERDERLKHHLLASKELHPALISPECEYKVLQRLTGALLAVALRPREAQCPLVRCIARELVTCLVLQPLINLASPAYINELIEYILTALKDVSIKQIGLGQSPNVEGHKGDHVITGDQHHVEAATNIATSSQSKGTDMTLSRYETAKESVSDGSENSITNTSHNEAMHPRSAEWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKVQKLAAAGGQSPLIQG--SDSSNALSTNLDKEISAQKAEAFTRMENQPLTPAHSRPPIDSRPSNQISSATLNTPTLNKVVSLKGNRIVNESENSTSSIASGNKNKMTRSNSTPDLNTEPVMKTDSICKSGGSVISEFCDKDLSSTSQATNAKSALNMVSSSEGQQAVKLRCRVVGAYFEKLGSKSFAVYSIAVTDIDGITWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSPSMMKSLAVNVDDAMDDIVRQFKGVSDGLIRKVASPTSVPEPASSAYGRNLSLKEDEINKLNLRRDTADSINSFSD-EEGDKSTNLHGKDSGYDIQTNGWHSDNELNSKEFPPRVVTRSDDFRNISSEEKAFSTLQSELS-SLRASPGVKSPLTPGQLDDPIGVPQEWTPPNLSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLMQIHWLRRDDTIAQGIRWIQDVLWPGGKFFLKLNIRS--KADDNETNDISSQSTSLSASSNTSKPGSFELQLEAARRASNVKKMILS 988
            MKAM+T++DLIEEAK+RTV+WALCIF+VSYFLTHTSKSMWMN+PISIL V  LRIL NEVEF WKVRN R+Q+YL+HLEKKQLSVNDSRLS  PPP KWKRKIDSP+V+AAM++FV KLLQDFV DLWY+DITPDKEAPEL+  VVMDVLGE+SGR+KEINLV+LLTRD+VDL+G +LDLFRRNQ AIG++VMGTLSSEERDERLKHHL+ASKELHPALISPECEYKVLQRL G LLAV LRPREAQCPLVRCIARELVTCLV+QP++N ASP Y+NELIEY+  A KD      G  +SPNV GH  D  +  +    E  +    SS S GT +T +R +  K +  D  E   ++    E+M P+ A+WARVL+AATQRR EVLMPENLENMW IGRNYKKKVQK+AA G Q+P+ +G  +++S A   N  KE+   +A   +  +++ L    +R   ++R  +  ++A   +  LNK  S+ G  + +E E++TS  A GNK  + RSNST  L  +P +K     + GGS+ISEF   D    +     KSA + V  SEG    KLRCRV+GAYFEKLGS SFAVYSIAVTD D  TWFVKRRYRNFERLHR LKDIPNYTLHLPPKRIFSSSTEDAFVHQRCI+LDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKS S+M+SLAVNVDDA+DDI+RQFKG      + VAS + + E + +    NLS   DEINK     ++ +S  SFSD EEGDK      ++ G  +Q NGWHSDNEL+SK FPPRVV R + F  IS  EK   +    LS SL   P    P+T   L DP  VP EWTPP LS+P+LNLVD +FQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLL QI  LRRDD IAQGIRW+QDVLWP G FF++LN ++  + +D +  + SSQST  S  S  SK GSFE QLEAARRAS+VKKMI +
Sbjct:    1 MKAMETLQDLIEEAKLRTVYWALCIFAVSYFLTHTSKSMWMNIPISILFVSALRILFNEVEFHWKVRNFRQQSYLAHLEKKQLSVNDSRLSTMPPPQKWKRKIDSPIVKAAMEEFVNKLLQDFVRDLWYTDITPDKEAPELMRTVVMDVLGEISGRLKEINLVDLLTRDVVDLVGNHLDLFRRNQTAIGVDVMGTLSSEERDERLKHHLIASKELHPALISPECEYKVLQRLIGGLLAVVLRPREAQCPLVRCIARELVTCLVMQPVMNFASPGYVNELIEYVFLANKDDVSTVAGDNRSPNVTGHTTDRTVALNVMQNEFTSRKNVSSHSPGTALTGTRSDNKKGTSLDAPEIMNSDLFGEESMQPQPADWARVLDAATQRRKEVLMPENLENMWTIGRNYKKKVQKIAAGGLQAPVAKGLVTNTSEA-RKNSGKEMPTSRAVISSATDDKSLVQLPARLQTETRIGDGKNNALHLSHDLNKEQSVVGVHL-DELEDTTSFTAIGNKGGLKRSNSTSALKIQPNVKKAFTGEDGGSIISEFYSPDFGRHNNVPTVKSASDKVFCSEGVHNPKLRCRVIGAYFEKLGSTSFAVYSIAVTDADKNTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIRLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSSSVMRSLAVNVDDAVDDILRQFKGKR----KVVASSSPLHESSPAISTTNLSWNADEINK---HLNSEESAKSFSDNEEGDKDGIYGHEEVGPTVQANGWHSDNELDSKGFPPRVVKRGEKFV-ISDSEKIHGSEAKSLSVSLAGYPAAGFPVTSDHLQDPTEVPPEWTPPKLSIPVLNLVDKMFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLRQIQLLRRDDIIAQGIRWVQDVLWPEGTFFMRLNTQTEIEMEDCQPKERSSQST--SHCSKVSKQGSFEQQLEAARRASDVKKMIFN 982    
BLAST of DCAR_003624 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2MZA0 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL11p039077:mrna}))

HSP 1 Score: 1221.84 bits (3160), Expect = 0.000e+0
Identity = 628/992 (63.31%), Postives = 736/992 (74.19%), Query Frame = 0
 
Query:    1 MKAMKTIEDLIEEAKIRTVWWALCIFSVSYFLTHTSKSMWMNVPISILIVCGLRILCNEVEFRWKVRNIRRQTYLSHLEKKQLSVNDSRLSNSPPPPKWKRKIDSPVVEAAMDDFVKKLLQDFVVDLWYSDITPDKEAPELIHAVVMDVLGEVSGRVKEINLVELLTRDIVDLIGKNLDLFRRNQAAIGMEVMGTLSSEERDERLKHHLLASKELHPALISPECEYKVLQRLTGALLAVALRPREAQCPLVRCIARELVTCLVLQPLINLASPAYINELIEYILTALKDVSIKQIGLGQSPNVEGHKGDHVITGDQHHVEAATNIATSSQSKGTDMTLSRYETAKESVSDGSENSITNTSHNEAMHPRSAEWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKVQKLAAAGGQSPLIQGSDSSNAL-STNLDKEISAQKAEAFTRMENQPLTPAHSRPPID--SRPSNQISSATLNTPTLNKVVSLKGNRIVNESENSTSSIASGNKNKMTRSNSTPDLNTEPVMKTDSICKSGGSVISEFCDKDLSSTSQATNAKSALNMVSSSEGQQAVKLRCRVVGAYFEKLGSKSFAVYSIAVTDIDGITWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSPSMMKSLAVNVDDAMDDIVRQFKGVSDGLIRKVASPTSVPEPASSAYGRNLSLKEDEINKLNLRRDTADSINSFSD-EEGDKSTNLHGKDSGYDIQTNGWHSDNELNSKEFPPRVVTRSDDFRNISSEEKAFSTLQSELSSLRASPGVKSPLTPGQLDDPIGVPQEWTPPNLSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLMQIHWLRRDDTIAQGIRWIQDVLWPGGKFFLKLNI-RSKADDNETNDISSQSTSLSASSNTSKPGSFELQLEAARRASNVKKMIL 987
            MKAM+T++DLIEEAK+RTVWWALCIF+VSYF+THTSKSMWMN+PISIL V  LRIL NEVEFRWKVR++R  TYLSHLEKKQLSVNDSRLS  PPP KWKRKIDSPVVEAAM DF+ K+L+DFVVDLWYS+ITPD+E PE I A++MD LGE+SGRVKE+NLV+LLTRDIVDLIG +LDLFRRNQAAIG+EVM TLSSEERDERLKHHL+ASKELHPALISPE EYKVLQRL G +LAV LRPREAQ PL+R IARELVTCLV+QP++N ASP YINELIEYIL AL D S+K +G  +S NV  H  DH +       +   +   SS S+GTDMTL +    +E         IT   + E    +SA+WARVL A TQRRTEVL PENLEN+W  GRNYKKK  K   AG Q P+ +GS + NA+ + +L KE      E +  ++ + +        ID  S   N+        P+  K +S +G   VNE E++ +  A GNK+ + RSNST  L  +P  +     + GGS+ISEF   ++   ++    +SA ++V  SEGQQ  KLRCRV+GAYFEKLGSKSFAVYSIAVTD +  TWFVKRRYRNFERLHR LKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLS SSKNYSFGKS S+M+SLAVNVDDA+DDIVRQFKGVSDGLIRKV+ P    E +SS   RNL L  D+IN+      +  + NS+SD EEGDK  N HG +   +  TNGWHSDNELNSK FPPRV+   ++ RN+ SE++    ++S +      P    P+     +DP+G+P EWTP N+SVPLLNLVD +FQLKRRGWLRRQVFWISKQILQL+MEDAIDDWLL QIHWLRRDD IAQGIRW+QDVLWP G FF+KL   +S  DD E     SQ+T+    S  S  G+FE QLEAARRAS VKKM+ 
Sbjct:    1 MKAMRTVQDLIEEAKLRTVWWALCIFAVSYFMTHTSKSMWMNIPISILFVSALRILLNEVEFRWKVRSVRPPTYLSHLEKKQLSVNDSRLSTMPPPAKWKRKIDSPVVEAAMSDFIDKILKDFVVDLWYSEITPDREFPEQIRAIIMDALGEISGRVKELNLVDLLTRDIVDLIGNHLDLFRRNQAAIGVEVMATLSSEERDERLKHHLMASKELHPALISPESEYKVLQRLIGGVLAVVLRPREAQSPLIRSIARELVTCLVVQPVMNFASPGYINELIEYILLALNDESLKGVGNYESTNVVAHPLDHPLAAGAVRDDVTASRKYSSFSQGTDMTLDKINNQRE---------ITLDYNTEVPMNQSADWARVLNAVTQRRTEVLTPENLENLWTKGRNYKKKELKKIKAGLQDPITKGSGTKNAIPNKDLGKETLTNMPEIYVGIDQRAVKQLTHGLGIDVLSSDGNKTGKQFFLDPS--KKLSFEGGHPVNELEHTNTPAADGNKSCLKRSNSTSALVVQPHTEKTFTGEHGGSIISEFYSANVGRHNEEHYGRSASDVVFHSEGQQFPKLRCRVMGAYFEKLGSKSFAVYSIAVTDAENRTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSASSKNYSFGKSSSVMRSLAVNVDDAVDDIVRQFKGVSDGLIRKVSGPLPTYEASSSTASRNLPLNADDINRHVSSHYSVGTENSYSDNEEGDKDEN-HGHEE-VNSSTNGWHSDNELNSKSFPPRVIKCGEEPRNLGSEKRHGLMVKSGIDQ-GGFPAADLPVISDHWEDPVGMPPEWTPSNVSVPLLNLVDKIFQLKRRGWLRRQVFWISKQILQLIMEDAIDDWLLRQIHWLRRDDVIAQGIRWVQDVLWPDGTFFMKLGTAQSNDDDTEPKQKPSQTTTRFGGSKISTLGAFEQQLEAARRASEVKKMLF 978    
BLAST of DCAR_003624 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VSL1 ((uncharacterized protein LOC104220214 {ECO:0000313|RefSeq:XP_009769343.1}))

HSP 1 Score: 1212.59 bits (3136), Expect = 0.000e+0
Identity = 621/995 (62.41%), Postives = 745/995 (74.87%), Query Frame = 0
 
Query:    1 MKAMKTIEDLIEEAKIRTVWWALCIFSVSYFLTHTSKSMWMNVPISILIVCGLRILCNEVEFRWKVRNIRRQTYLSHLEKKQLSVNDSRLSNSPPPPKWKRKIDSPVVEAAMDDFVKKLLQDFVVDLWYSDITPDKEAPELIHAVVMDVLGEVSGRVKEINLVELLTRDIVDLIGKNLDLFRRNQAAIGMEVMGTLSSEERDERLKHHLLASKELHPALISPECEYKVLQRLTGALLAVALRPREAQCPLVRCIARELVTCLVLQPLINLASPAYINELIEYILTALKDVSIKQIGLGQSPNVEGHKGDHVITGDQHHV-EAATNIATSSQSKGTDMTLSRYETAKESVSDGSENSITNTSHNEAMHPRSAEWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKVQKLAAAGG-QSPLIQGSDSSNALSTNLDKEISAQKAEAFTRMENQPLTPAHSRPPIDSRPSNQISSATLNTPTLNKVVSLKGNRIVNESENSTSSIASGNKNKMTRSNSTPDL----NTEPVMKTDSICKSGGSVISEFCDKDLSSTSQATNAKSALNMVSSSEGQQAVKLRCRVVGAYFEKLGSKSFAVYSIAVTDIDGITWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSPSMMKSLAVNVDDAMDDIVRQFKGVSDGLIRK-VASPTSVP-EPASSAYGRNLSLKEDEINKLNLRRDTADSINSFSD-EEGDKSTNLHGKDSGYDIQTNGWHSDNELNSKEFPPRVVTRSDDFRNISSEEKAFSTLQSELSSLRASPGVKSPLTPGQLDDPIGVPQEWTPPNLSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLMQIHWLRRDDTIAQGIRWIQDVLWPGGKFFLKLNIRSKADDNETNDISSQSTSLSASSNTSKPGSFELQLEAARRASNVKKMI 986
            MKAM+T++DLIEE K+RTVWW LCIF+V YFLTHTS SMWMN+PI++L+V GLRIL NEV+FRWKVRN+R  TYL+HLEKKQLSVNDSRLS SPP  KWKRKI SP+VEAA + F+ K+L DFV+DLWYSDITPD+EAPELIH ++MDVLGE+SGRVK INLVELLTRD+VDLIG +LDLFRRNQ AIG++VMGTLSSEERDERLKHHLLASKELHPALIS E EYKVLQRL G +LAV LRPREAQ PLVRCIAREL+T LV+QPL+NLASP YINELIEYI  A  D   KQ G G+S   E H  +   + D     E        ++++GTD ++ +Y+  +E  S  + +SI+++  +EA HPR A+WARVLEAATQRRTEVLMPENLENMWAIGRNYKKK+QK +A+GG Q+P ++ + SS     +  KE+  QK+E   +M ++   P        ++P NQ S A   +  L K V  KG  I  + +N+++ +A   K ++ RSNST DL    NTE ++    + K GGS+ISEF   +    +   +  SA +MV   EG    KL+CRV+GAYFEKL SKSFAVYSIAVTD +  TWFVKRRYRNFERLHR LKDIPNYTLHLPPKRIFSSSTEDAFVH RCIQLDKYLQDLLSIANVAEQHEVWDFLS SSKNYSFGKS S+M++LAVNVDDA+DDIVRQFKGVSDGL+RK V SP+S   EP +S   RNLS   +E+NKL L + T++S+NSFSD ++GDK  +   ++ G   + NGWHSDNELNSK FPPRVV  +++ R+ +++ K  S            P     + P Q +DP GVP EWTPPNLSVP+LNLVD +FQL RRGWLRRQVFWISK+I+QLMMEDAIDDWLL QIHWLRR+D IAQGI WI+DVLWP G FF+KL    + ++ E N     +T     S  SK GSFE QLEA RRAS+VKKM+
Sbjct:    1 MKAMETLQDLIEEVKVRTVWWGLCIFAVCYFLTHTSTSMWMNLPIAVLLVFGLRILFNEVDFRWKVRNVRPPTYLAHLEKKQLSVNDSRLSTSPPTLKWKRKIGSPLVEAAAEGFIDKVLHDFVIDLWYSDITPDREAPELIHEIIMDVLGEISGRVKGINLVELLTRDVVDLIGDHLDLFRRNQTAIGVDVMGTLSSEERDERLKHHLLASKELHPALISAESEYKVLQRLIGGILAVVLRPREAQSPLVRCIARELLTSLVVQPLLNLASPGYINELIEYIFLAYNDEGCKQSGDGKSTKAESHNRNQGASSDTVKCSETDYKQKEPTKNQGTDASICQYDHRREQSSANAGSSISSSIQDEANHPRPADWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKIQKYSASGGIQAPGVKVTVSSG---KDEGKELPTQKSEVVMKMVDKQHDP--------NQPHNQRSHALHLSQELKKEVPSKGG-ISYDVDNASAIVAYETKTRLKRSNSTSDLVIQSNTEDLL----MSKGGGSIISEFYSAEYRRNNAVPSTMSASDMVIRGEGHHRPKLKCRVLGAYFEKLASKSFAVYSIAVTDANNNTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHHRCIQLDKYLQDLLSIANVAEQHEVWDFLSASSKNYSFGKSSSVMRTLAVNVDDAVDDIVRQFKGVSDGLMRKVVGSPSSSSYEPTTSTSDRNLSWNVEEMNKLALTQSTSESLNSFSDNDDGDKDGSHGQEEVGPSSEANGWHSDNELNSKGFPPRVVKCNEELRSSAADSKYGSG---------GFPDTSLAVVPSQQEDPAGVPPEWTPPNLSVPILNLVDKIFQLNRRGWLRRQVFWISKEIMQLMMEDAIDDWLLRQIHWLRREDVIAQGIGWIKDVLWPNGIFFIKLRNPVEINNREPN---QGTTRQPVGSKASKAGSFEEQLEATRRASDVKKML 967    
BLAST of DCAR_003624 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4D6S2 ((uncharacterized protein LOC107826583 {ECO:0000313|RefSeq:XP_016509056.1}))

HSP 1 Score: 1212.59 bits (3136), Expect = 0.000e+0
Identity = 621/995 (62.41%), Postives = 745/995 (74.87%), Query Frame = 0
 
Query:    1 MKAMKTIEDLIEEAKIRTVWWALCIFSVSYFLTHTSKSMWMNVPISILIVCGLRILCNEVEFRWKVRNIRRQTYLSHLEKKQLSVNDSRLSNSPPPPKWKRKIDSPVVEAAMDDFVKKLLQDFVVDLWYSDITPDKEAPELIHAVVMDVLGEVSGRVKEINLVELLTRDIVDLIGKNLDLFRRNQAAIGMEVMGTLSSEERDERLKHHLLASKELHPALISPECEYKVLQRLTGALLAVALRPREAQCPLVRCIARELVTCLVLQPLINLASPAYINELIEYILTALKDVSIKQIGLGQSPNVEGHKGDHVITGDQHHV-EAATNIATSSQSKGTDMTLSRYETAKESVSDGSENSITNTSHNEAMHPRSAEWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKVQKLAAAGG-QSPLIQGSDSSNALSTNLDKEISAQKAEAFTRMENQPLTPAHSRPPIDSRPSNQISSATLNTPTLNKVVSLKGNRIVNESENSTSSIASGNKNKMTRSNSTPDL----NTEPVMKTDSICKSGGSVISEFCDKDLSSTSQATNAKSALNMVSSSEGQQAVKLRCRVVGAYFEKLGSKSFAVYSIAVTDIDGITWFVKRRYRNFERLHRQLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSPSMMKSLAVNVDDAMDDIVRQFKGVSDGLIRK-VASPTSVP-EPASSAYGRNLSLKEDEINKLNLRRDTADSINSFSD-EEGDKSTNLHGKDSGYDIQTNGWHSDNELNSKEFPPRVVTRSDDFRNISSEEKAFSTLQSELSSLRASPGVKSPLTPGQLDDPIGVPQEWTPPNLSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLMMEDAIDDWLLMQIHWLRRDDTIAQGIRWIQDVLWPGGKFFLKLNIRSKADDNETNDISSQSTSLSASSNTSKPGSFELQLEAARRASNVKKMI 986
            MKAM+T++DLIEE K+RTVWW LCIF+V YFLTHTS SMWMN+PI++L+V GLRIL NEV+FRWKVRN+R  TYL+HLEKKQLSVNDSRLS SPP  KWKRKI SP+VEAA + F+ K+L DFV+DLWYSDITPD+EAPELIH ++MDVLGE+SGRVK INLVELLTRD+VDLIG +LDLFRRNQ AIG++VMGTLSSEERDERLKHHLLASKELHPALIS E EYKVLQRL G +LAV LRPREAQ PLVRCIAREL+T LV+QPL+NLASP YINELIEYI  A  D   KQ G G+S   E H  +   + D     E        ++++GTD ++ +Y+  +E  S  + +SI+++  +EA HPR A+WARVLEAATQRRTEVLMPENLENMWAIGRNYKKK+QK +A+GG Q+P ++ + SS     +  KE+  QK+E   +M ++   P        ++P NQ S A   +  L K V  KG  I  + +N+++ +A   K ++ RSNST DL    NTE ++    + K GGS+ISEF   +    +   +  SA +MV   EG    KL+CRV+GAYFEKL SKSFAVYSIAVTD +  TWFVKRRYRNFERLHR LKDIPNYTLHLPPKRIFSSSTEDAFVH RCIQLDKYLQDLLSIANVAEQHEVWDFLS SSKNYSFGKS S+M++LAVNVDDA+DDIVRQFKGVSDGL+RK V SP+S   EP +S   RNLS   +E+NKL L + T++S+NSFSD ++GDK  +   ++ G   + NGWHSDNELNSK FPPRVV  +++ R+ +++ K  S            P     + P Q +DP GVP EWTPPNLSVP+LNLVD +FQL RRGWLRRQVFWISK+I+QLMMEDAIDDWLL QIHWLRR+D IAQGI WI+DVLWP G FF+KL    + ++ E N     +T     S  SK GSFE QLEA RRAS+VKKM+
Sbjct:    1 MKAMETLQDLIEEVKVRTVWWGLCIFAVCYFLTHTSTSMWMNLPIAVLLVFGLRILFNEVDFRWKVRNVRPPTYLAHLEKKQLSVNDSRLSTSPPTLKWKRKIGSPLVEAAAEGFIDKVLHDFVIDLWYSDITPDREAPELIHEIIMDVLGEISGRVKGINLVELLTRDVVDLIGDHLDLFRRNQTAIGVDVMGTLSSEERDERLKHHLLASKELHPALISAESEYKVLQRLIGGILAVVLRPREAQSPLVRCIARELLTSLVVQPLLNLASPGYINELIEYIFLAYNDEGCKQSGDGKSTKAESHNRNQGASSDTVKCSETDYKQKEPTKNQGTDASICQYDHRREQSSANAGSSISSSIQDEANHPRPADWARVLEAATQRRTEVLMPENLENMWAIGRNYKKKIQKYSASGGIQAPGVKVTVSSG---KDEGKELPTQKSEVVMKMVDKQHDP--------NQPHNQRSHALHLSQELKKEVPSKGG-ISYDVDNASAIVAYETKTRLKRSNSTSDLVIQSNTEDLL----MSKGGGSIISEFYSAEYRRNNAVPSTMSASDMVIRGEGHHRPKLKCRVLGAYFEKLASKSFAVYSIAVTDANNNTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHHRCIQLDKYLQDLLSIANVAEQHEVWDFLSASSKNYSFGKSSSVMRTLAVNVDDAVDDIVRQFKGVSDGLMRKVVGSPSSSSYEPTTSTSDRNLSWNVEEMNKLALTQSTSESLNSFSDNDDGDKDGSHGQEEVGPSSEANGWHSDNELNSKGFPPRVVKCNEELRSSAADSKYGSG---------GFPDTSLAVVPSQQEDPAGVPPEWTPPNLSVPILNLVDKIFQLNRRGWLRRQVFWISKEIMQLMMEDAIDDWLLRQIHWLRREDVIAQGIGWIKDVLWPNGIFFIKLRNPVEINNREPN---QGTTRQPVGSKASKAGSFEEQLEATRRASDVKKML 967    
Match NameStatsDescription
A0A5B6ZAB1E-Value: 0.000e+0, PID: 67.00(Uncharacterized protein {ECO:0000313|EMBL:MPA4094... [more]
A0A6I9U3C2E-Value: 0.000e+0, PID: 63.84(uncharacterized protein LOC105169587 {ECO:0000313... [more]
A0A2R6RBY5E-Value: 0.000e+0, PID: 64.26(Sorting nexin-16 like {ECO:0000313|EMBL:PSS26080.... [more]
A0A7J7HPC7E-Value: 0.000e+0, PID: 62.18(Uncharacterized protein {ECO:0000313|EMBL:KAF5954... [more]
A0A2G9GUJ6E-Value: 0.000e+0, PID: 62.75(Uncharacterized protein {ECO:0000313|EMBL:PIN0868... [more]
A0A2G9G705E-Value: 0.000e+0, PID: 62.78(Uncharacterized protein {ECO:0000313|EMBL:PIN0109... [more]
A0A2R6RH82E-Value: 0.000e+0, PID: 63.68(Sorting nexin-16 like {ECO:0000313|EMBL:PSS29374.... [more]
A0A7N2MZA0E-Value: 0.000e+0, PID: 63.31(Uncharacterized protein {ECO:0000313|EnsemblPlant... [more]
A0A1U7VSL1E-Value: 0.000e+0, PID: 62.41(uncharacterized protein LOC104220214 {ECO:0000313... [more]
A0A1S4D6S2E-Value: 0.000e+0, PID: 62.41(uncharacterized protein LOC107826583 {ECO:0000313... [more]

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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions.

For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins.

Data from this analysis can be viewed in JBrowse here.

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