DCAR_001483

Resource Type: 
Polypeptide
Name: 
DCAR_001483
Identifier: 
DCAR_001483.mRNA-protein
Sequence: 
MTTVLAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDNSPVARRNLRS
TIENRALDINRDFLLASSTAQQALDRVEEEINAITECCDNISKALSSCNA
TTGDIISTTERLKHDLEITTQRQEIVESFLRDYQLSSEEINALREEELTE
NFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVHQEGAYERLCRWV
QNECRRLGDTDNPEVGDLLKNAVRCLKERPVLFKYCAEEVANMRHNALFR
RFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVL
LDPDAVVDTGPTARRFSTKSDSESGKTELDLTFVLDRIFEGVCRPFKVRV
EQVLQSQPNLIISYKLSNTLEFYSYTISDLLGRETALCDTVWALKDAAQK
TYFDILKTRGEKLIRYPPLVSVDLSPPPAVREGVSILLEIIEIHDSMMVP
ASATKPDFDPVISALLDPIIKMCEQAAEAHKSKGSIQSSRRSKTSADQGQ
FSKSSVDAMLVHSRSAHSYQTTETPSKIFLINCLCAIQQPLLRHDIASKY
AMKLGGMIDNHLRDLVGKEVDAILSRCGLSEKMLRIRNSLKSESLPLAET
EETSPAYVSESLKAFFGLVLGSETSLPEFEQMQVPKLRSEACVQLAKLLA
EAYELVYEAIMDPKNRYPEPKSLARHPPDQIRTILGI*
Sequence Length: 
688
Sequence Checksum: 
0aad5510a6dcbd6f09d8044aa76d894f
View location in JBrowse: 
DCARv2_Chr1:15908911..15917461+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, DCAR_001483, derives from mRNA, DCAR_001483.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of DCAR_001483 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
[Close]
BLAST of DCAR_001483 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J4ZTT6 (Conserved oligomeric Golgi complex subunit 6 {ECO:0000256|RuleBase:RU365075} (COG complex subunit 6 {ECO:0000256|RuleBase:RU365075}) (Component of oligomeric Golgi complex 6 {ECO:0000256|RuleBase:RU365075}))

HSP 1 Score: 1189.1 bits (3075), Expect = 0.000e+0
Identity = 575/685 (83.94%), Postives = 624/685 (91.09%), Query Frame = 0
 
Query:    3 TVLAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDNSPVARRNLRSTIENRALDINRDFLLASSTAQQALDRVEEEINAITECCDNISKALSSCNATTGDIISTTERLKHDLEITTQRQEIVESFLRDYQLSSEEINALREEELTENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVHQEGAYERLCRWVQNECRRLGDTDNPEVGDLLKNAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVLLDPDAVVDTGPTARRFSTKSDSESGKTELDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNLIISYKLSNTLEFYSYTISDLLGRETALCDTVWALKDAAQKTYFDILKTRGEKLIRYPPLVSVDLSPPPAVREGVSILLEIIEIHDSMMVPASATKPDFDPVISALLDPIIKMCEQAAEAHKSKGSIQSSRRSKTSADQGQFSKSSVDAMLVHSRSAHSYQTTETPSKIFLINCLCAIQQPLLRHDIASKYAMKLGGMIDNHLRDLVGKEVDAILSRCGLSEKMLRIRNSLKSESLPLAETEETSPAYVSESLKAFFGLVLGSETSLPEFEQMQVPKLRSEACVQLAKLLAEAYELVYEAIMDPKNRYPEPKSLARHPPDQIRTILGI 687
            T LAPGLSRKLKKVLETRTD+PDLLASLNTLS+FYTDN+P ARRNLRSTIE R+L IN +FLLAS  AQQALDRVEEE+NA+ ECCD I+KAL+SCNATTGDIISTTERLK +LEITTQRQEI   FL DYQLS++EINALREE+L ENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAV+QEGAYERLCRWVQ ECRRLGDTDNPEV +LLK AVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGG+PRPIEVHAHDPLRYVGDMLGWLHQALASERELV VLLDPDAVVDTGPTARRF+ +S++ SGKTE DLTFVLDRIFEGVCRPFKVRVEQVLQSQP+LIISYKLSNTLEFYSYTISDLLGRETALC+T+W LKDAAQKT+F+ILKTRGEKL+RYPPLVSVDLSPPPAVREGVS+LLEIIE HDSMMVPAS   PDFDPVISALLDPII+MC+QAAEAHKSKG+IQSSRRS+ S+D  Q SKSSVD++L    S  S Q +ETPSKIF+INCLCAIQQPLL H++A++Y  KLG MIDNH++ LV KEVDAIL RCGLS KM    NSL SE  PLAE E+TSPA +SE LKAFFGLVLGSE SLPEFEQMQVPKLRSEACVQ+A+ LAEAYEL Y+AIMDPKN YP+P+SLARHPPDQIRTILGI
Sbjct:    5 TSLAPGLSRKLKKVLETRTDSPDLLASLNTLSTFYTDNTPYARRNLRSTIEKRSLSINHEFLLASDVAQQALDRVEEEVNALAECCDRIAKALNSCNATTGDIISTTERLKQELEITTQRQEIASCFLHDYQLSNDEINALREEDLNENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVYQEGAYERLCRWVQAECRRLGDTDNPEVSELLKTAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLVLLDPDAVVDTGPTARRFAKRSENNSGKTESDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIISYKLSNTLEFYSYTISDLLGRETALCNTLWVLKDAAQKTFFEILKTRGEKLLRYPPLVSVDLSPPPAVREGVSVLLEIIETHDSMMVPASGKNPDFDPVISALLDPIIQMCDQAAEAHKSKGAIQSSRRSRMSSDPNQLSKSSVDSILASGSSVPSSQISETPSKIFIINCLCAIQQPLLGHEVATEYVKKLGAMIDNHMQGLVEKEVDAILRRCGLSNKMGHFHNSLNSEEAPLAEIEDTSPASLSECLKAFFGLVLGSEGSLPEFEQMQVPKLRSEACVQVARSLAEAYELCYKAIMDPKNCYPDPRSLARHPPDQIRTILGI 689
[Close]
BLAST of DCAR_001483 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4KT30 (Conserved oligomeric Golgi complex subunit 6 {ECO:0000256|RuleBase:RU365075} (COG complex subunit 6 {ECO:0000256|RuleBase:RU365075}) (Component of oligomeric Golgi complex 6 {ECO:0000256|RuleBase:RU365075}) (Fragment))

HSP 1 Score: 1184.09 bits (3062), Expect = 0.000e+0
Identity = 574/712 (80.62%), Postives = 626/712 (87.92%), Query Frame = 0
 
Query:    1 MTTVLAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDNSPVARRNLRSTIENRALDINRDFLLASSTAQQALDRVEEEINAITECCDNISKALSSCNATTGDIISTTERLKHDLEITTQRQEIVESFLRDYQLSSEEINALREEELTENFFKALSHVQEIHANCKVLLRTHHQ------------------------RAGLELMDMMAVHQEGAYERLCRWVQNECRRLGDTDNPEVGDLLKNAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVLLDPDAVVDTGPTARRFSTKSDSESGKTELDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNLIISYKLSNTLEFYSYTISDLLGRETALCDTVWALKDAAQKTYFDILKTRGEKLIRYPPLVSVDLSPPPAVREGVSILLEIIEIHDSMMVPASATKPDFDPVISALLDPIIKMCEQAAEAHKSKGSIQSSRRSKTSADQGQFSKSSVDAMLVHSRSAHSYQTTETPSKIFLINCLCAIQQPLLRHDIASKYAMKLGGMIDNHLRDLVGKEVDAILSRCGLSEKMLRIRNSLKS-ESLPLAETEETSPAYVSESLKAFFGLVLGSETSLPEFEQMQVPKLRSEACVQLAKLLAEAYELVYEAIMDPKNRYPEPKSLARHPPDQIRTILGI 687
            M T LAPGLSRKLKKVLETRTDTPDLLASLNTLSSFY DN+P  RRNLRSTIE R+L IN +FLLAS+ AQQALDRVEEE+NA+ +CCD I+KAL+SCNATTGDIISTTERLK +LEITTQRQEIV  FLRDYQLS+EEINALREE+L ENFFKALSHVQEIHANCKVLLRTHHQ                        RAGLELMDMMAV+QEGAYERLCRWVQ ECRRLGDTDNPEV +LLK AVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGG+PRPIEVHAHDPLRYVGDMLGWLHQALASERELV VLLDPDAVVDTGPTARRFS   ++ESGKTE DL FVLDRIFEGVCRPFKVRVEQVLQSQP+++ISYKL+ TLEFYSYTISDLLGRETALC+T+WALKDAAQKT+FDILKTRGEKL+RYPPLVSVDLSPPPAVREGVS+LLEII+ HDSMMVPAS  KP FDPVI+ALLDPII+MCEQAAEAHKSKG+IQ SRRS+TS+D GQ +KSSVDA+L ++ SA + QT ETPSKIFLINCLCAIQQPLLRH++AS+Y  KLG MIDNH+  LV KEVD IL RC L  KM R  NSL   E  PLAETEETSP+ +SE LKAFFGL+LGSE+SLPEFEQ+QVP+LRSE C Q+AK LAEAYEL+Y+ IMDP+NRYP+PKSLARHPPDQIRTILGI
Sbjct:    1 MGTALAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYADNNPHGRRNLRSTIEKRSLSINHEFLLASNAAQQALDRVEEEVNALADCCDKIAKALNSCNATTGDIISTTERLKQELEITTQRQEIVSCFLRDYQLSNEEINALREEDLNENFFKALSHVQEIHANCKVLLRTHHQVISCVVITTACGNITWNSPEGPSQRAGLELMDMMAVYQEGAYERLCRWVQAECRRLGDTDNPEVNELLKMAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLVLLDPDAVVDTGPTARRFSKTLETESGKTETDLMFVLDRIFEGVCRPFKVRVEQVLQSQPSIMISYKLTYTLEFYSYTISDLLGRETALCNTLWALKDAAQKTFFDILKTRGEKLLRYPPLVSVDLSPPPAVREGVSVLLEIIQNHDSMMVPASGKKPVFDPVIAALLDPIIQMCEQAAEAHKSKGAIQLSRRSRTSSDPGQLTKSSVDAILSNNGSAATSQTNETPSKIFLINCLCAIQQPLLRHEVASEYVKKLGTMIDNHMNGLVDKEVDGILRRCDLLNKMPRFLNSLNGQEKTPLAETEETSPSALSECLKAFFGLILGSESSLPEFEQIQVPQLRSETCTQVAKSLAEAYELIYKVIMDPENRYPDPKSLARHPPDQIRTILGI 712
[Close]
BLAST of DCAR_001483 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q353 (Conserved oligomeric Golgi complex subunit 6 {ECO:0000256|RuleBase:RU365075} (COG complex subunit 6 {ECO:0000256|RuleBase:RU365075}) (Component of oligomeric Golgi complex 6 {ECO:0000256|RuleBase:RU365075}))

HSP 1 Score: 1161.36 bits (3003), Expect = 0.000e+0
Identity = 553/685 (80.73%), Postives = 611/685 (89.20%), Query Frame = 0
 
Query:    3 TVLAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDNSPVARRNLRSTIENRALDINRDFLLASSTAQQALDRVEEEINAITECCDNISKALSSCNATTGDIISTTERLKHDLEITTQRQEIVESFLRDYQLSSEEINALREEELTENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVHQEGAYERLCRWVQNECRRLGDTDNPEVGDLLKNAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVLLDPDAVVDTGPTARRFSTKSDSESGKTELDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNLIISYKLSNTLEFYSYTISDLLGRETALCDTVWALKDAAQKTYFDILKTRGEKLIRYPPLVSVDLSPPPAVREGVSILLEIIEIHDSMMVPASATKPDFDPVISALLDPIIKMCEQAAEAHKSKGSIQSSRRSKTSADQGQFSKSSVDAMLVHSRSAHSYQTTETPSKIFLINCLCAIQQPLLRHDIASKYAMKLGGMIDNHLRDLVGKEVDAILSRCGLSEKMLRIRNSLKSESLPLAETEETSPAYVSESLKAFFGLVLGSETSLPEFEQMQVPKLRSEACVQLAKLLAEAYELVYEAIMDPKNRYPEPKSLARHPPDQIRTILGI 687
            + LAPGLSRKLKKVLETRTDTPDL+ASL+TLS FY DN+P ARRNLRSTIE R+L IN DFLLAS  AQQALDRVEEE+NA+ ECCD I+KAL+SCNATTGDIISTTERLK +LE+TTQRQ+IV  FLRDYQLS+EEI+ALREE+L ENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAV+QEGAYERLCRWVQ ECRRLGDTDN EV +LLK AVRCLKERPVLFKYC EEVANMRHNALFRRFISALTRGGPGG+PRPIEVHAHDPLRYVGDMLGWLHQALASERELV  LLDPDA+VDTGPTARRFS   +S+SGK + DLTFVLDRIFEGVCRPFKVRVEQVLQSQPN+IISYKLSN LEFYSYTISDLLGRETALC+T+WALKDAAQ T+FDILKTRGEKL+RYPPLV++DLSPP AVREGV +LLEII  +DSMMVPAS  KP FDPVISALLDPII+MCEQAAEAHKSKGS  SSRRS+T++D  Q +KSSVDA+L +  S  +  T+ETPSKIFLINCLCAIQQPLL H+ AS+Y  +LG MI+NH+  LVG EVDAIL RCGL  KM    NSL  +   LAE E+T+PA +S+ LKAFFGLVLGSE+S+PEFEQMQVPKLRSE C+Q+A+ LAEAYEL+Y+AI DPKNRYP+PKSLARHPPDQIRTILGI
Sbjct:    5 SALAPGLSRKLKKVLETRTDTPDLVASLSTLSDFYVDNNPHARRNLRSTIEKRSLSINHDFLLASDAAQQALDRVEEEVNALAECCDKIAKALNSCNATTGDIISTTERLKQELEVTTQRQDIVSCFLRDYQLSNEEISALREEDLNENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVYQEGAYERLCRWVQAECRRLGDTDNSEVSELLKTAVRCLKERPVLFKYCGEEVANMRHNALFRRFISALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLTLLDPDAMVDTGPTARRFSKGLESDSGKPDTDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNIIISYKLSNMLEFYSYTISDLLGRETALCNTLWALKDAAQNTFFDILKTRGEKLLRYPPLVAIDLSPPSAVREGVLVLLEIIGTYDSMMVPASGKKPVFDPVISALLDPIIQMCEQAAEAHKSKGSFHSSRRSRTTSDPSQLTKSSVDAILANRSSVATSLTSETPSKIFLINCLCAIQQPLLGHEAASEYVKRLGTMINNHMNSLVGNEVDAILRRCGLLNKMSHFHNSLTGDETLLAEMEDTTPAALSDCLKAFFGLVLGSESSMPEFEQMQVPKLRSETCIQVARSLAEAYELIYKAITDPKNRYPDPKSLARHPPDQIRTILGI 689
[Close]
BLAST of DCAR_001483 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0GCT5 (Conserved oligomeric Golgi complex subunit 6 {ECO:0000256|RuleBase:RU365075} (COG complex subunit 6 {ECO:0000256|RuleBase:RU365075}) (Component of oligomeric Golgi complex 6 {ECO:0000256|RuleBase:RU365075}))

HSP 1 Score: 1157.9 bits (2994), Expect = 0.000e+0
Identity = 552/685 (80.58%), Postives = 609/685 (88.91%), Query Frame = 0
 
Query:    3 TVLAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDNSPVARRNLRSTIENRALDINRDFLLASSTAQQALDRVEEEINAITECCDNISKALSSCNATTGDIISTTERLKHDLEITTQRQEIVESFLRDYQLSSEEINALREEELTENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVHQEGAYERLCRWVQNECRRLGDTDNPEVGDLLKNAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVLLDPDAVVDTGPTARRFSTKSDSESGKTELDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNLIISYKLSNTLEFYSYTISDLLGRETALCDTVWALKDAAQKTYFDILKTRGEKLIRYPPLVSVDLSPPPAVREGVSILLEIIEIHDSMMVPASATKPDFDPVISALLDPIIKMCEQAAEAHKSKGSIQSSRRSKTSADQGQFSKSSVDAMLVHSRSAHSYQTTETPSKIFLINCLCAIQQPLLRHDIASKYAMKLGGMIDNHLRDLVGKEVDAILSRCGLSEKMLRIRNSLKSESLPLAETEETSPAYVSESLKAFFGLVLGSETSLPEFEQMQVPKLRSEACVQLAKLLAEAYELVYEAIMDPKNRYPEPKSLARHPPDQIRTILGI 687
            + LAPGLSRKLKKVLETRTDTPDL+ASL+TLS FY DN+P ARRNLRSTIE R+L IN DFLLAS  AQQALDRVEEE+NA+ ECCD I+KAL+SCNATTGDIISTTERLK +LE+TTQRQ+IV  FLRDYQLS+EEI+ALREE+L E FFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAV+QEGAYERLCRWVQ ECRRLGDTDN EV +LLK AVRCLKERPVLFKYC EEVANMRHNALFRRFISALTRGGPGG+PRPIEVHAHDPLRYVGDMLGWLHQALASERELV  LLDPDA+VDTGPTARRFS   +S+SGK + DLTFVLDRIFEGVCRPFKVRVEQVLQSQPN+IISYKLSN LEFYSYTISDLLGRETALC+T+WALKDAAQ T+FDILKTRGEKL+RYPPLV++DLSPP AVREGV +LLEII  +DSMMVPAS  KP FDPVISALLDPII+MCEQAAEAHKSKGS  SSRRS+T++D  Q +KSSVDA+L +  S  +  T+ETPSKIFLINCLCAIQQPLL H+ AS+Y  KLG MI+NH+  LV  EVDAIL RCGL  KM    NSL  +   LAE E+T+PA +S+ LKAFFGLVLGSE+S+PEFEQMQVPKLRSE C+Q+A+ LAEAYEL+Y+AI DPKNRYP+PKSLARHPPDQIRTILGI
Sbjct:    5 SALAPGLSRKLKKVLETRTDTPDLVASLSTLSDFYVDNNPHARRNLRSTIEKRSLSINHDFLLASDAAQQALDRVEEEVNALAECCDKIAKALNSCNATTGDIISTTERLKQELEVTTQRQDIVSCFLRDYQLSNEEISALREEDLNEKFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVYQEGAYERLCRWVQAECRRLGDTDNSEVSELLKTAVRCLKERPVLFKYCGEEVANMRHNALFRRFISALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLALLDPDAMVDTGPTARRFSKGLESDSGKPDTDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNIIISYKLSNMLEFYSYTISDLLGRETALCNTLWALKDAAQNTFFDILKTRGEKLLRYPPLVAIDLSPPSAVREGVLVLLEIIGTYDSMMVPASGKKPVFDPVISALLDPIIQMCEQAAEAHKSKGSFHSSRRSRTTSDPSQLTKSSVDAILANRSSVATSPTSETPSKIFLINCLCAIQQPLLGHEAASEYVKKLGTMINNHMNSLVSNEVDAILRRCGLLNKMSHFHNSLTGDETLLAEMEDTTPAALSDCLKAFFGLVLGSESSMPEFEQMQVPKLRSETCIQVARSLAEAYELIYKAITDPKNRYPDPKSLARHPPDQIRTILGI 689
[Close]
BLAST of DCAR_001483 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834G7C9 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7127531.1}))

HSP 1 Score: 1148.65 bits (2970), Expect = 0.000e+0
Identity = 573/737 (77.75%), Postives = 626/737 (84.94%), Query Frame = 0
 
Query:    1 MTTVLAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDNSPVARRNLRSTIENRALDINRDFLLASSTAQQALDRVEEEINAITECCDN--------------ISKALSSCNATTGDIISTTERLKHDLEITTQRQEIVESFLRDYQLSSEEINALREEELTENFFKALSHVQEIHANCKVLLRTHHQ-----------------------------------RAGLELMDMMAVHQEGAYERLCRWVQNECRRLGDTDNPEVGDLLKNAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVLLDPDAVVDTGPTARRFSTKSDSESGKTELDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNLIISYKLSNTLEFYSYTISDLLGRETALCDTVWALKDAAQKTYFDILKTRGEKLIRYPPLVSVDLSPPPAVREGVSILLEIIEIHDSMMVPASATKPDFDPVISALLDPIIKMCEQAAEAHKSKGSIQSSRRSKTSADQGQFSKSSVDAMLVHSRSAHSYQTTETPSKIFLINCLCAIQQPLLRHDIASKYAMKLGGMIDNHLRDLVGKEVDAILSRCGLSEKMLRIRNSLKS-ESLPLAETEETSPAYVSESLKAFFGLVLGSETSLPEFEQMQVPKLRSEACVQLAKLLAEAYELVYEAIMDPKNRYPEPKSLARHPPDQIRTILGI 687
            M T LAPGLSRKLKKVLETRTDTPDLLASLNTLSSFY DN+P ARRNLRSTIE R+L IN +FLLAS+ AQQALDRVEEE+NA+ +CCD               I+KAL+SCNATTGDIISTTERLK +LEITTQRQEIV  FLRDYQLS+EEINALREE+L ENFFKALSHVQEIHANCKVLLRTHHQ                                   RAGLELMDMMAV+QEGAYERLCRWVQ ECRRLGDTDNPEV +LLK AVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGG+PRPIEVHAHDPLRYVGDMLGWLHQALASERELV +LLDPDAVVDTGPTARRFS   ++ESGKTE DL FVLDRIFEGVCRPFKVRVEQVLQSQP+++ISYKL+ TLEFYSYTISDLLGRETALC+T+WALKDAAQKT+FDILK RGEKL+RYPPLVSVDLSPPPAVREGVS+LLEII+ HDSMMVPAS  KP FDPVI+ALLDPII+MCEQAAEAHKSKG+IQ SRRS+TS+D GQ SKSSVDA+L ++ SA + QT ETPSKIFLINCLCAIQQPLL+H++AS+Y  KLG MIDNH+  LV KEVDAIL RC L  KM R  NSL   E   LAE EETSP+ +SE LKAFFGL+LGSE+SLPEFEQ+QVP+LRSE C Q+AK LAEAYEL+Y+AIMDP+NRYP+PKSLARHPPDQIRTILGI
Sbjct:    1 MGTALAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYADNNPHARRNLRSTIEKRSLSINHEFLLASNAAQQALDRVEEEVNALADCCDKYVGTLLGQVKGITRIAKALNSCNATTGDIISTTERLKQELEITTQRQEIVSCFLRDYQLSNEEINALREEDLNENFFKALSHVQEIHANCKVLLRTHHQLHPFSASSLRSPLISAIAEFTGGNITWNSPGGPFQRAGLELMDMMAVYQEGAYERLCRWVQAECRRLGDTDNPEVNELLKMAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLMLLDPDAVVDTGPTARRFSKTLETESGKTETDLMFVLDRIFEGVCRPFKVRVEQVLQSQPSIMISYKLTYTLEFYSYTISDLLGRETALCNTLWALKDAAQKTFFDILKARGEKLLRYPPLVSVDLSPPPAVREGVSVLLEIIQNHDSMMVPASGKKPVFDPVIAALLDPIIQMCEQAAEAHKSKGAIQLSRRSRTSSDSGQLSKSSVDAILSNNGSAATSQTNETPSKIFLINCLCAIQQPLLQHEVASEYVKKLGTMIDNHMNGLVDKEVDAILRRCDLLNKMPRFLNSLNGQEKTQLAEMEETSPSALSECLKAFFGLILGSESSLPEFEQIQVPQLRSETCTQVAKSLAEAYELIYKAIMDPENRYPDPKSLARHPPDQIRTILGI 737
[Close]
BLAST of DCAR_001483 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A251V741 (Conserved oligomeric Golgi complex subunit 6 {ECO:0000256|RuleBase:RU365075} (COG complex subunit 6 {ECO:0000256|RuleBase:RU365075}) (Component of oligomeric Golgi complex 6 {ECO:0000256|RuleBase:RU365075}))

HSP 1 Score: 1144.41 bits (2959), Expect = 0.000e+0
Identity = 551/686 (80.32%), Postives = 612/686 (89.21%), Query Frame = 0
 
Query:    2 TTVLAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDNSPVARRNLRSTIENRALDINRDFLLASSTAQQALDRVEEEINAITECCDNISKALSSCNATTGDIISTTERLKHDLEITTQRQEIVESFLRDYQLSSEEINALREEELTENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVHQEGAYERLCRWVQNECRRLGDTDNPEVGDLLKNAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVLLDPDAVVDTGPTARRFSTKSDSESGKTELDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNLIISYKLSNTLEFYSYTISDLLGRETALCDTVWALKDAAQKTYFDILKTRGEKLIRYPPLVSVDLSPPPAVREGVSILLEIIEIHDSMMVPASATKPDFDPVISALLDPIIKMCEQAAEAHKSKGSIQSSRRSKTSADQGQFSKSSVDAMLVHSRSAHSYQTTETPSKIFLINCLCAIQQPLLRHDIASKYAMKLGGMIDNHLRDLVGKEVDAILSRCGLSEKMLRIRNSLKSESLPLAETEETSPAYVSESLKAFFGLVLGSETSLPEFEQMQVPKLRSEACVQLAKLLAEAYELVYEAIMDPKNRYPEPKSLARHPPDQIRTILGI 687
            TT LAPGLSRKLKKVLETRTD+PDLLASLNTLS+FYT+N+  ARRNLRSTIE R+L IN DFLLAS  AQQALDRVEEE+N++ ECCD I+K+LS+CNATTGDII+TTERLK +LE+TTQRQEI   FLRDYQLS+EEINALREEEL ENFFKALSHVQ IHANCKVLLRTHHQRAGLELMDMMAV+QEGAYERLCRWVQ ECRRLGDTDNPEV +LLK AVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVLLDPDAVV+TGPTARRFS  S+S   K+E DLTFVLDRIFEGVCRPFKVRVEQVLQSQPNLIISYKLSNTLEFYSYT+SDLLGRETALC+T+W LKDAAQKT+FDILK RGEKL+RYPP V+VDLSPPPA+ EGVS+LLE+I+IHD+MMVPAS  KP FDPVISALLDPII++CE A EAHKSKGSI+SSRR++T  D GQ  +SSVDA+L  S      +  ET SKIF+INCLCAIQQPLLRHD+AS+Y  KLG MIDNH+  LV KEV+AIL+RCGLS KM   +NS  ++S PLA+ E+TSP  +SESLKAFFGL+LGS++SLPEFEQM +P LRSEAC Q+A  LAEAY+++Y+AIMDP N Y +PKSLARHPPDQIRTILGI
Sbjct:    4 TTALAPGLSRKLKKVLETRTDSPDLLASLNTLSTFYTENTTPARRNLRSTIEKRSLSINHDFLLASDAAQQALDRVEEEVNSLAECCDKIAKSLSNCNATTGDIITTTERLKQELEVTTQRQEIASCFLRDYQLSNEEINALREEELNENFFKALSHVQTIHANCKVLLRTHHQRAGLELMDMMAVYQEGAYERLCRWVQTECRRLGDTDNPEVSELLKMAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVLLDPDAVVNTGPTARRFSMSSESNEEKSEGDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNLIISYKLSNTLEFYSYTVSDLLGRETALCNTLWGLKDAAQKTFFDILKVRGEKLLRYPPFVAVDLSPPPALSEGVSLLLELIQIHDTMMVPASGIKPAFDPVISALLDPIIQICELAMEAHKSKGSIESSRRNRTKTDVGQSRRSSVDAILASSSQVFPSKNNETTSKIFIINCLCAIQQPLLRHDVASEYVKKLGTMIDNHMLSLVEKEVEAILTRCGLSNKMSLFKNS-TADSPPLADMEDTSPESLSESLKAFFGLILGSDSSLPEFEQMNLPGLRSEACAQVATSLAEAYDVIYKAIMDPSNGYADPKSLARHPPDQIRTILGI 688
[Close]
BLAST of DCAR_001483 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7TU00 (Conserved oligomeric Golgi complex subunit 6 {ECO:0000256|RuleBase:RU365075} (COG complex subunit 6 {ECO:0000256|RuleBase:RU365075}) (Component of oligomeric Golgi complex 6 {ECO:0000256|RuleBase:RU365075}))

HSP 1 Score: 1141.72 bits (2952), Expect = 0.000e+0
Identity = 551/690 (79.86%), Postives = 608/690 (88.12%), Query Frame = 0
 
Query:    1 MTTV-LAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDNSPVARRNLRSTIENRALDINRDFLLASSTAQQALDRVEEEINAITECCDNISKALSSCNATTGDIISTTERLKHDLEITTQRQEIVESFLRDYQLSSEEINALREEELTENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVHQEGAYERLCRWVQNECRRLGDTDNPEVGDLLKNAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVLLDPDAVVDTGPTARRFSTKSDSESGKTELDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNLIISYKLSNTLEFYSYTISDLLGRETALCDTVWALKDAAQKTYFDILKTRGEKLIRYPPLVSVDLSPPPAVREGVSILLEIIEIHDSMMVPASATKPDFDPVISALLDPIIKMCEQAAEAHKSKGSIQSSRRSKTSADQGQFSKSSVDAMLVHSRSAHSYQTTETPSKIFLINCLCAIQQPLLRHDIASKYAMKLGGMIDNHLRDLVGKEVDAILSRCGLSEKMLRIRNSLKSESL--PLAETEETSPAYVSESLKAFFGLVLGSETSLPEFEQMQVPKLRSEACVQLAKLLAEAYELVYEAIMDPKNRYPEPKSLARHPPDQIRTILGI 687
            M TV +APGLSRKLKKVLE+RTD+PDLLASLNTLS+FYT+N+  ARRNLRSTIE R L IN DFL AS  AQQALD VEEE+NA+ +CCD I+KAL+SCNATTGDIISTTERLK +LEITTQRQEI   FLRDYQLS+EEI+ALREE+L ENFFKALSHVQEIHANCK+LLRTHHQRAGLELMDMMAV+QEGAYERLCRWVQ ECRRLGD+DNPEV +LLK AVRCLKERPVLF YCAEEVANMRHNALFRRFISALTRGGPG +PRPIEVHAHDPLRYVGDMLGWLHQALASERELV  LLDPDA VDT PTA+R S  S+S+ GK E DL FVLDRIFEGVCRPFKVRVEQVLQSQPNLII+YKLSNTLEFY YTISDLLGRET+LC+T+W LKDAAQKT+FDILK+RGEKL+RYPPLV+VDLSPP A+REGVS+LLEIIE HDSMM+PAS  KP FDPVISALLDPII+MCEQAAEAHKSKG   SSRRS+ S + GQ SKSS DA+L +S S    Q +ETPSKIFLINCLCAIQQPLL H+IAS+Y  KLG MIDNH+  LV K+VDAIL RCGLS KM   RNS     +  PLAE E+TSPA +SE LKAFFGL+LGSE+SLPEFEQMQVPKLR++AC+Q+AKLLAEAY+L+Y AIMDPKN YP+PKSLARHPP QI+TILGI
Sbjct:    1 MATVGVAPGLSRKLKKVLESRTDSPDLLASLNTLSTFYTENTQHARRNLRSTIEKRCLSINHDFLRASDAAQQALDCVEEEVNALADCCDRIAKALNSCNATTGDIISTTERLKQELEITTQRQEIASCFLRDYQLSNEEISALREEDLNENFFKALSHVQEIHANCKILLRTHHQRAGLELMDMMAVYQEGAYERLCRWVQAECRRLGDSDNPEVSELLKTAVRCLKERPVLFNYCAEEVANMRHNALFRRFISALTRGGPGELPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLALLDPDAAVDTEPTAQRLSKISESDGGKMESDLKFVLDRIFEGVCRPFKVRVEQVLQSQPNLIIAYKLSNTLEFYCYTISDLLGRETSLCNTLWLLKDAAQKTFFDILKSRGEKLLRYPPLVAVDLSPPAALREGVSVLLEIIETHDSMMIPASEKKPAFDPVISALLDPIIQMCEQAAEAHKSKGVTHSSRRSRASTESGQMSKSSFDAILSNSGSTLFSQDSETPSKIFLINCLCAIQQPLLGHEIASEYVKKLGAMIDNHMNILVEKQVDAILRRCGLSNKMPHFRNSFNKAVVEAPLAEMEDTSPASLSECLKAFFGLILGSESSLPEFEQMQVPKLRADACLQVAKLLAEAYQLIYSAIMDPKNGYPDPKSLARHPPHQIQTILGI 690
[Close]
BLAST of DCAR_001483 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4E7J6 (Conserved oligomeric Golgi complex subunit 6 {ECO:0000256|RuleBase:RU365075} (COG complex subunit 6 {ECO:0000256|RuleBase:RU365075}) (Component of oligomeric Golgi complex 6 {ECO:0000256|RuleBase:RU365075}))

HSP 1 Score: 1137.87 bits (2942), Expect = 0.000e+0
Identity = 549/687 (79.91%), Postives = 604/687 (87.92%), Query Frame = 0
 
Query:    2 TTVLAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDNSPVARRNLRSTIENRALDINRDFLLASSTAQQALDRVEEEINAITECCDNISKALSSCNATTGDIISTTERLKHDLEITTQRQEIVESFLRDYQLSSEEINALREEELTENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVHQEGAYERLCRWVQNECRRLGDTDNPEVGDLLKNAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVLLDPDAVVDTGPTARRFSTKS-DSESGKTELDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNLIISYKLSNTLEFYSYTISDLLGRETALCDTVWALKDAAQKTYFDILKTRGEKLIRYPPLVSVDLSPPPAVREGVSILLEIIEIHDSMMVPASATKPDFDPVISALLDPIIKMCEQAAEAHKSKGSIQSSRRSKTSADQGQFSKSSVDAMLVHSRSAHSYQTTETPSKIFLINCLCAIQQPLLRHDIASKYAMKLGGMIDNHLRDLVGKEVDAILSRCGLSEKMLRIRNSLKSESLPLAETEETSPAYVSESLKAFFGLVLGSETSLPEFEQMQVPKLRSEACVQLAKLLAEAYELVYEAIMDPKNRYPEPKSLARHPPDQIRTILGI 687
            T+ LAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDN+P  RRNLRSTIE R+L IN +FLLAS  AQQALDRVEEE+N++ ECCD I+KAL+SCNATTGDIISTTERLK +LEITTQRQEIV  FLRDYQLS+EEINALRE EL ENFFKALSHVQEIH NCKVLLRTHHQ A L    ++             WVQ ECRRLGDTDNPEV +LL+ AVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELV  LLDPDAVVDTGPTARRFS+   +S+ GK E DLTFVLDRIFEGVCRPFKVRVEQVLQSQP++IISYKLSNTLEFYSYTISDLLGRETALC+T+WALKDA+QKT+FDILKTRGEKL+RYPPLV+VDLSPPPAVREGVS+LLEIIE HD MMVPAS  K DFDPVISALLDPII++CEQAAEAHKSKG+I S RR++T++D  Q SKSSVDA+L +S +  + QT+ETPSKIFLINCLCAIQQPLL H++AS+Y  KLG MIDNH+  LV KEV  IL RCGLS KM   +NSL SE + LAE E+TSP  +SE LKAFFGL+LGSE+SLPEFEQMQVPKLRSE C+Q+A+LLAEAYEL+Y+AIMDPKNRYP+PKSLARHPPDQIRTILGI
Sbjct:    4 TSALAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDNNPQVRRNLRSTIEKRSLSINLEFLLASDAAQQALDRVEEEVNSLAECCDKIAKALNSCNATTGDIISTTERLKQELEITTQRQEIVSCFLRDYQLSNEEINALREAELNENFFKALSHVQEIHTNCKVLLRTHHQMADLVGTSIVRP-----------WVQAECRRLGDTDNPEVSELLRTAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLALLDPDAVVDTGPTARRFSSNGLESDIGKNETDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSIIISYKLSNTLEFYSYTISDLLGRETALCNTLWALKDASQKTFFDILKTRGEKLLRYPPLVAVDLSPPPAVREGVSVLLEIIETHDGMMVPASGKKSDFDPVISALLDPIIQICEQAAEAHKSKGAIHSFRRNRTTSDPSQLSKSSVDAILANSNTLATSQTSETPSKIFLINCLCAIQQPLLGHEVASEYVKKLGTMIDNHMNSLVEKEVGTILRRCGLSNKMSHFQNSLNSEEILLAEMEDTSPTALSECLKAFFGLILGSESSLPEFEQMQVPKLRSETCIQVARLLAEAYELIYKAIMDPKNRYPDPKSLARHPPDQIRTILGI 679
[Close]
BLAST of DCAR_001483 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N0T243 (Conserved oligomeric Golgi complex subunit 6 {ECO:0000256|RuleBase:RU365075} (COG complex subunit 6 {ECO:0000256|RuleBase:RU365075}) (Component of oligomeric Golgi complex 6 {ECO:0000256|RuleBase:RU365075}))

HSP 1 Score: 1137.09 bits (2940), Expect = 0.000e+0
Identity = 543/692 (78.47%), Postives = 620/692 (89.60%), Query Frame = 0
 
Query:    1 MTTV-LAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDNSPVARRNLRSTIENRALDINRDFLLASSTAQQALDRVEEEINAITECCDNISKALSSCNATTGDIISTTERLKHDLEITTQRQEIVESFLRDYQLSSEEINALREEELTENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVHQEGAYERLCRWVQNECRRLGDTDNPEVGDLLKNAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVLLDPDAVVDTGPTARRFSTKSDSESGKTELDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNLIISYKLSNTLEFYSYTISDLLGRETALCDTVWALKDAAQKTYFDILKTRGEKLIRYPPLVSVDLSPPPAVREGVSILLEIIEIHDSMMVPASATKPDFDPVISALLDPIIKMCEQAAEAHKSKGSIQSSRRSKTSADQGQFSKSSVDAMLVHSRSAHSYQTTETPSKIFLINCLCAIQQPLLRHDIASKYAMKLGGMIDNHLRDLVGKEVDAILSRCGLSEKMLRIRNSLKSESL----PLAETEETSPAYVSESLKAFFGLVLGSETSLPEFEQMQVPKLRSEACVQLAKLLAEAYELVYEAIMDPKNRYPEPKSLARHPPDQIRTILGI 687
            M TV LAPGLSRKLKKVL++R D+PDLL+SLNTLS FY++N+P ARRNLRSTIE R+L IN +FLLAS +AQQALDRVEEE++A+ +CCD I+KALS+CN TTGDIISTTERLK +L++TTQRQEIV  FLRDYQLSSEEI ALREE+L ENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAV+QEGAYERLCRWVQ ECRRLGD+DNPEVG+LLK AVR LK+RPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELV  LL PDA+ +TGPTARRFST ++SESGK+E DL FVLDRIF GVCRPFK RVEQVLQSQP+LII+Y+LSNTLEFYSYTISDLLGRETALC T+WALKDAA KT+FDI+K+RGEKL+RYPPLV+VDLSPPPAVREGVS+LLEI+EI+DSMMVPA+  KPDFDPVISALLDPII+MCEQAAEAHKSKG++QS RRS+ S+D G+ SKS++D++L +S SA S Q  ETPSKIFLINCLCAIQQPLL+HD A+ YA  L  MID+H+++LV KE DAILS+CGL+ KM    +SL SE      PLAE E+TSPA ++ESLK  FGL+LGS+++LPEFEQ+QVPKLRSEAC+ LA+ L++AYEL+Y AIMDPKN Y +PK+LARHPPDQIRTILGI
Sbjct:    1 MATVGLAPGLSRKLKKVLDSRIDSPDLLSSLNTLSDFYSENTPQARRNLRSTIEKRSLSINNEFLLASDSAQQALDRVEEEVDALADCCDRIAKALSACNETTGDIISTTERLKQELDVTTQRQEIVSCFLRDYQLSSEEITALREEDLNENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVYQEGAYERLCRWVQAECRRLGDSDNPEVGELLKTAVRSLKDRPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLALLYPDAIAETGPTARRFSTNTESESGKSETDLQFVLDRIFVGVCRPFKGRVEQVLQSQPSLIIAYRLSNTLEFYSYTISDLLGRETALCTTLWALKDAATKTFFDIVKSRGEKLLRYPPLVAVDLSPPPAVREGVSVLLEIVEIYDSMMVPATGKKPDFDPVISALLDPIIQMCEQAAEAHKSKGAVQSGRRSRKSSDAGKLSKSAMDSILSNSISAQSTQNAETPSKIFLINCLCAIQQPLLKHDAAAAYAKNLASMIDSHMQNLVEKEADAILSKCGLAHKMRLFHDSLFSEDADTAPPLAEMEDTSPASLAESLKNLFGLILGSDSALPEFEQLQVPKLRSEACLGLARSLSQAYELIYRAIMDPKNGYKDPKTLARHPPDQIRTILGI 692
[Close]
BLAST of DCAR_001483 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: B9S1S6 (Conserved oligomeric Golgi complex subunit 6 {ECO:0000256|RuleBase:RU365075} (COG complex subunit 6 {ECO:0000256|RuleBase:RU365075}) (Component of oligomeric Golgi complex 6 {ECO:0000256|RuleBase:RU365075}))

HSP 1 Score: 1130.55 bits (2923), Expect = 0.000e+0
Identity = 539/689 (78.23%), Postives = 608/689 (88.24%), Query Frame = 0
 
Query:    5 LAPGLSRKLKKVLETRTDTPDLLASLNTLSSFYTDNSPVARRNLRSTIENRALDINRDFLLASSTAQQALDRVEEEINAITECCDNISKALSSCNATTGDIISTTERLKHDLEITTQRQEIVESFLRDYQLSSEEINALREEELTENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVHQEGAYERLCRWVQNECRRLGDTDNPEVGDLLKNAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVFVLLDPDAVVDTGPTARRFSTKSDSESGKTELDLTFVLDRIFEGVCRPFKVRVEQVLQSQPNLIISYKLSNTLEFYSYTISDLLGRETALCDTVWALKDAAQKTYFDILKTRGEKLIRYPPLVSVDLSPPPAVREGVSILLEIIEIHDSMMVPASATKPDFDPVISALLDPIIKMCEQAAEAHKSKGSIQSSRRSKTSADQGQFSKSSVDAMLVHSRSAHSYQTTETPSKIFLINCLCAIQQPLLRHDIASKYAMKLGGMIDNHLRDLVGKEVDAILSRCGLSEKMLRIRNSLKSES------LPLAETEETSPAYVSESLKAFFGLVLGSETSLPEFEQMQVPKLRSEACVQLAKLLAEAYELVYEAIMDPKNRYPEPKSLARHPPDQIRTILGI 687
            LAPGLSRKLKKVLE RTDTPDL+ASL+ LS+FY+DN+P ARRNLRSTIE R+L IN  FL AS+ AQ ALDRVEEE+N++ ECCD I+KAL+SC+A+TGDIISTTERLK +LE+TTQRQEIV  FLRDYQLS+EEINALREEEL ENFFKALSHVQEIHANCK+LLRTHHQRAGLELMDMMAV+QEGAYERLCRWVQ ECR+LGD DNPEV +LL+ AVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELV VL DPDAV+DTG TA R S  +++ +GK E DLTFVLDRIFEGVCRPFKVRVEQVLQSQP+LI++YKLS TLEFYSYT+SDLLGR+TALC T+W LK+AAQKT+FDILK+RGEKL+RYPPLV++DLSPP AVREGVS+LLEIIE H+SMM+PAS  K DFD VISA+LDPII+MCEQAAEAHKSKG+   SRR +TS+D GQ +KSSVDA+L +S SA + Q +ETPSKIFLINCLCAIQQPL RH+IA+ Y  KLG MI+NH+  LV KE DAIL RCGLS KM   +NSL +E+      +PLA+ E+TSPA +SESL+AFFGL+LGS + LPEFEQMQVPKLRSEAC+ LA+ LAEAYEL+Y AIMDPKN Y  PKSLARHPPDQIRTILGI
Sbjct:    7 LAPGLSRKLKKVLECRTDTPDLVASLDALSTFYSDNTPQARRNLRSTIEKRSLHINLQFLQASNAAQLALDRVEEEVNSLAECCDKIAKALNSCSASTGDIISTTERLKQELEVTTQRQEIVSCFLRDYQLSNEEINALREEELNENFFKALSHVQEIHANCKILLRTHHQRAGLELMDMMAVYQEGAYERLCRWVQAECRKLGDADNPEVSELLRTAVRCLKERPVLFKYCAEEVANMRHNALFRRFISALTRGGPGGMPRPIEVHAHDPLRYVGDMLGWLHQALASERELVLVLFDPDAVLDTGSTANRLSKSTENGAGKIESDLTFVLDRIFEGVCRPFKVRVEQVLQSQPSLIVAYKLSITLEFYSYTMSDLLGRDTALCSTLWMLKEAAQKTFFDILKSRGEKLLRYPPLVAIDLSPPEAVREGVSVLLEIIETHNSMMIPASEKKSDFDSVISAILDPIIQMCEQAAEAHKSKGAAHLSRR-RTSSDSGQINKSSVDALLSNSNSAPTSQNSETPSKIFLINCLCAIQQPLYRHEIAADYVKKLGAMIENHMHALVAKEADAILRRCGLSNKMSHFQNSLNNEAGDAVVGIPLAQIEDTSPAALSESLRAFFGLILGSGSPLPEFEQMQVPKLRSEACLLLARSLAEAYELIYTAIMDPKNGYSGPKSLARHPPDQIRTILGI 694
Match NameStatsDescription
A0A5J4ZTT6E-Value: 0.000e+0, PID: 83.94Conserved oligomeric Golgi complex subunit 6 {ECO:... [more]
A0A6A4KT30E-Value: 0.000e+0, PID: 80.62Conserved oligomeric Golgi complex subunit 6 {ECO:... [more]
A0A2R6Q353E-Value: 0.000e+0, PID: 80.73Conserved oligomeric Golgi complex subunit 6 {ECO:... [more]
A0A7J0GCT5E-Value: 0.000e+0, PID: 80.58Conserved oligomeric Golgi complex subunit 6 {ECO:... [more]
A0A834G7C9E-Value: 0.000e+0, PID: 77.75(Uncharacterized protein {ECO:0000313|EMBL:KAF7127... [more]
A0A251V741E-Value: 0.000e+0, PID: 80.32Conserved oligomeric Golgi complex subunit 6 {ECO:... [more]
D7TU00E-Value: 0.000e+0, PID: 79.86Conserved oligomeric Golgi complex subunit 6 {ECO:... [more]
A0A4S4E7J6E-Value: 0.000e+0, PID: 79.91Conserved oligomeric Golgi complex subunit 6 {ECO:... [more]
A0A7N0T243E-Value: 0.000e+0, PID: 78.47Conserved oligomeric Golgi complex subunit 6 {ECO:... [more]
B9S1S6E-Value: 0.000e+0, PID: 78.23Conserved oligomeric Golgi complex subunit 6 {ECO:... [more]

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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
DCAR peptide blastp to SwissProt and TrEMBL without DCAR

This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions.
DCAR V1.0 Gene Prediction

For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins.

Data from this analysis can be viewed in JBrowse here.