BLAST of DCAR_003517 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A5B7AE81 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
Query: 1 MGCLCSKATWSNDFVVDYEREKEKESRKSSVQLVPP--KEEFVAESRRG----SVHRIS----NENVGSVRGTKDGEDR---IVERPKSGHHKR--------TGSESIHGRISSNPGAAEGE--ATEWPSWLISVAKDAVHGWTPRSADSYEKLKKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREICILRRLDHPNVMRLEAIVTSRMSDNLYLVFEYMEHDLTGLLASPDVKFTVPQIKCYMQQLLSGLEHCHRRGVLHRDIKGSNLLIDNKGVLKIGDFGLATFFNPDKKQLLTSRVVTLWYRAPELLLGATSYGAAIDMWSVGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPSEQYWKKTKLPHATSFKPQQPYKRQVAETFKDLPSSALELVDVLLSVEPEARSTASSALKSEFFTTAPLPCDPSSLPKYAPSKEYDAKLR-EEKKRRKVESVKGRGPESVRRGHRELKENDPTPEFMAHGQ---QVHSN-KCASVAYKPHGDAGAGFPLEPSKGLKNTGINHSTSMVHPSAAV-SWSAKAKDETGVTVSGRTNSSIHRGSNLRRQ--------------HSHKNEKASSNDNMGQIRKKSRILCSGPLVPAGGSMEDLLKEHEKHIQDAVRKARLDKDKSKKNLGD 624
MGC+CSK T +ND+V E E EKE KS Q++ P +EE V E +G SVH IS NVGSV K+ E++ ++RP H+R G + + +I S P AEGE A WPSWL SVA +A+ GW PRSA+S+EKL KIGQGTYSSVYKARDLKT KIVAMKKVRFVNMDPESVRFMAREI ILR+LDHPNVM+LEA+VTSR+S +LYLVFEYMEHDL GL ASP +KFT PQIKCYMQQLL GLEHCH RGVLHRDIKGSNLLID+ G+LKIGDFGLATFF PD+ Q LTSRVVTLWYRAPELLLGAT YG AID+WS GCILAELF GKPIMPGRTEVEQMHKIFKLCGSPSE+YW+ +KLPHATSFKPQ PYKR VAETFKDLPSSAL L+DVLL++EPE R TA SAL SE F T PLPC+PS+LPKY PSKE+DAKLR EE KR+K E VKGRGPESVR G RE KE PTPEF A GQ QV SN KC S+ Y PH D G+GFP+EP +G G +HS+SM+HPSA S + K +++ G++ G+T SS GS +RRQ H K+++ D+MG + KK+RI CSGPL+P GG+MED+LKEHE+ IQ+AVRK+RLDK ++KKN D
Sbjct: 1 MGCICSKGTRANDYVA--ENEGEKEPNKSLEQVIAPSKREEIVVEEDKGGTDASVHPISKPAIQTNVGSVPAAKNEEEKKKTSIDRPTHAQHQRRATMDMGVNGGQQMMSQIVSIPHGAEGEQVAAGWPSWLTSVAGEAIQGWVPRSAESFEKLDKIGQGTYSSVYKARDLKTGKIVAMKKVRFVNMDPESVRFMAREIYILRKLDHPNVMKLEALVTSRISCSLYLVFEYMEHDLAGLAASPKIKFTEPQIKCYMQQLLRGLEHCHSRGVLHRDIKGSNLLIDDNGILKIGDFGLATFFQPDQNQPLTSRVVTLWYRAPELLLGATEYGVAIDIWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEEYWRNSKLPHATSFKPQHPYKRCVAETFKDLPSSALALIDVLLAIEPEKRGTAVSALNSELFMTNPLPCEPSNLPKYPPSKEFDAKLRDEEAKRQKAEGVKGRGPESVRGGPRESKEV-PTPEFNAKGQVSLQVKSNTKCTSIRYNPHEDGGSGFPIEPPRGNAKNGFSHSSSMIHPSAVGHSRTKKVREDEGLSGPGQTTSSSQNGSEMRRQRSNMPNLAANSSNSHRKKDDRMFGKDSMGYVPKKNRIHCSGPLMPPGGNMEDMLKEHERQIQEAVRKSRLDKARTKKNCYD 664
BLAST of DCAR_003517 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A5B7AEI9 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
Query: 1 MGCLCSKATWSNDFVVDYEREKEKESRKSSVQLVPP--KEEFVAESRRG----SVHRIS----NENVGSVRGTKDGEDR---IVERPKSGHHKR--------TGSESIHGRISSNPGAAEGE--ATEWPSWLISVAKDAVHGWTPRSADSYEKLKKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREICILRRLDHPNVMRLEAIVTSRMSDNLYLVFEYMEHDLTGLLASPDVKFTVPQIKCYMQQLLSGLEHCHRRGVLHRDIKGSNLLIDNKGVLKIGDFGLATFFNPDKKQLLTSRVVTLWYRAPELLLGATSYGAAIDMWSVGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPSEQYWKKTKLPHATSFKPQQPYKRQVAETFKDLPSSALELVDVLLSVEPEARSTASSALKSEFFTTAPLPCDPSSLPKYAPSKEYDAKLR-EEKKRRKVESVKGRGPESVRRGHRELKENDPTPEFMAHGQ---QVHSN-KCASVAYKPHGDAGAGFPLEPSKGLKNTGINHSTSMVHPSAAV-SWSAKAKDETGVTVSGRTNSSIHRGSNLRRQ--------------HSHKNEKASSNDNMGQIRKKSRILCSGPLVPAGGSMEDLLKEHEKHIQDAVRKARLDKDKSKKNLGD 624
MGC+CSK T +ND+V E E EKE KS Q++ P +EE V E +G SVH IS NVGSV K+ E++ ++RP H+R G + + +I S P AEGE A WPSWL SVA +A+ GW PRSA+S+EKL KIGQGTYSSVYKARDLKT KIVAMKKVRFVNMDPESVRFMAREI ILR+LDHPNVM+LEA+VTSR+S +LYLVFEYMEHDL GL ASP +KFT PQIKCYMQQLL GLEHCH RGVLHRDIKGSNLLID+ G+LKIGDFGLATFF PD+ Q LTSRVVTLWYRAPELLLGAT YG AID+WS GCILAELF GKPIMPGRTEVEQMHKIFKLCGSPSE+YW+ +KLPHATSFKPQ PYKR VAETFKDLPSSAL L+DVLL++EPE R TA SAL SE F T PLPC+PS+LPKY PSKE+DAKLR EE KR+K E VKGRGPESVR G RE KE PTPEF A GQ QV SN KC S+ Y PH D G+GFP+EP +G G +HS+SM+HPSA S + K +++ G++ G+T SS GS +RRQ H K+++ D+MG + KK+RI CSGPL+P GG+MED+LKEHE+ IQ+AVRK+RLDK ++KKN D
Sbjct: 1 MGCICSKGTRANDYVA--ENEGEKEPNKSLEQVIAPSKREEIVVEEDKGGTDASVHPISKPAIQTNVGSVPAAKNEEEKKKTSIDRPTHAQHQRRATMDMGVNGGQQMMSQIVSIPHGAEGEQVAAGWPSWLTSVAGEAIQGWVPRSAESFEKLDKIGQGTYSSVYKARDLKTGKIVAMKKVRFVNMDPESVRFMAREIYILRKLDHPNVMKLEALVTSRISCSLYLVFEYMEHDLAGLAASPKIKFTEPQIKCYMQQLLRGLEHCHSRGVLHRDIKGSNLLIDDNGILKIGDFGLATFFQPDQNQPLTSRVVTLWYRAPELLLGATEYGVAIDIWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEEYWRNSKLPHATSFKPQHPYKRCVAETFKDLPSSALALIDVLLAIEPEKRGTAVSALNSELFMTNPLPCEPSNLPKYPPSKEFDAKLRDEEAKRQKAEGVKGRGPESVRGGPRESKEV-PTPEFNAKGQVSLQVKSNTKCTSIRYNPHEDGGSGFPIEPPRGNAKNGFSHSSSMIHPSAVGHSRTKKVREDEGLSGPGQTTSSSQNGSEMRRQRSNMPNLAANSSNSHRKKDDRMFGKDSMGYVPKKNRIHCSGPLMPPGGNMEDMLKEHERQIQEAVRKSRLDKARTKKNCYD 664
BLAST of DCAR_003517 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A5B7ADH0 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
Query: 1 MGCLCSKATWSNDFVVDYEREKEKESRKSSVQLVPP--KEEFVAESRRG----SVHRIS----NENVGSVRGTKDGEDR---IVERPKSGHHKR--------TGSESIHGRISSNPGAAEGE--ATEWPSWLISVAKDAVHGWTPRSADSYEKLKKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREICILRRLDHPNVMRLEAIVTSRMSDNLYLVFEYMEHDLTGLLASPDVKFTVPQIKCYMQQLLSGLEHCHRRGVLHRDIKGSNLLIDNKGVLKIGDFGLATFFNPDKKQLLTSRVVTLWYRAPELLLGATSYGAAIDMWSVGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPSEQYWKKTKLPHATSFKPQQPYKRQVAETFKDLPSSALELVDVLLSVEPEARSTASSALKSEFFTTAPLPCDPSSLPKYAPSKEYDAKLR-EEKKRRKVESVKGRGPESVRRGHRELKENDPTPEFMAHGQ---QVHSN-KCASVAYKPHGDAGAGFPLEPSKGLKNTGINHSTSMVHPSAA-VSWSAKAKDETGVTVSGRTNSSIHRGSNLRRQ-----------HSHKNEKASSNDNMGQIRKKSRILCSGPLVPAGGSMEDLLKEHEKHIQDAVRKARLDKDKSKKNLGD 624
MGC+CSK T +ND+V E E EKE KS Q++ P +EE V E +G SVH IS NVGSV K+ E++ ++RP H+R G + + +I S P AEGE A WPSWL SVA +A+ GW PRSA+S+EKL KIGQGTYSSVYKARDLKT KIVAMKKVRFVNMDPESVRFMAREI ILR+LDHPNVM+LEA+VTSRMS +LYLVFEYMEHDL GLLA P +KFT PQIKCYMQQLL GLEHCH RGVLHRDIKGSNLLIDN GVLKIGDFGLATFF PD+ Q LTSRVVTLWYRAPELLLG+T YG AID+WS GCILAELF GKPIMPGRTEVEQMHKIFKLCGSPSE+YW+K+KLPHATSFKP QPY R V+ETFKDLPSSAL L+DVLL++EPE R TA+SAL SEFFTT P PC+PSSLPKY PSKE+DAKLR EE +R+K E VKGRG +SVRRG RE KE PTPEF A GQ Q SN KC SV Y PH D G+GFP+EP +G G +HS+SMVHPSAA SW K +++ G+ +T +S GS LR++ ++H+ E MG + KK+RI CSGPL+P GG+MED+LKEHE+ IQ+AVRK+RLDK ++KKN D
Sbjct: 1 MGCICSKGTRANDYVA--ENEGEKEPNKSLEQVIAPSKREEIVVEEDKGGTDASVHPISKPAIQTNVGSVPAAKNEEEKKKTSIDRPTHAQHQRRATMDMGVNGGQQMMSQIVSIPHGAEGEQVAAGWPSWLTSVAGEAIQGWVPRSAESFEKLDKIGQGTYSSVYKARDLKTGKIVAMKKVRFVNMDPESVRFMAREIHILRKLDHPNVMKLEALVTSRMSCSLYLVFEYMEHDLAGLLAPPKIKFTEPQIKCYMQQLLHGLEHCHSRGVLHRDIKGSNLLIDNNGVLKIGDFGLATFFQPDQNQPLTSRVVTLWYRAPELLLGSTEYGVAIDLWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEEYWRKSKLPHATSFKPHQPYNRCVSETFKDLPSSALALIDVLLAIEPEKRGTAASALHSEFFTTMPPPCEPSSLPKYPPSKEFDAKLRDEEARRKKAEGVKGRGLDSVRRGSRESKEV-PTPEFDAKGQVSLQGQSNTKCISVRYNPHEDGGSGFPIEPPRGTAKNGFSHSSSMVHPSAAGYSWIRKVREDEGLIGLEQTTNSSRNGSELRQRSNMPHLAADSSNAHRKENRVFGKEMGYVPKKNRIHCSGPLMPPGGNMEDMLKEHERQIQEAVRKSRLDKARTKKNCYD 661
BLAST of DCAR_003517 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A5J5ACR4 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
Query: 1 MGCLCSKATWSNDFVVDYEREKEKESRKSSVQLVPP--KEEFVAESRRG----SVHRIS----NENVGSVRGTKDGEDR---IVERPKSGHHKR--------TGSESIHGRISSNPGAAEGE--ATEWPSWLISVAKDAVHGWTPRSADSYEKLKKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREICILRRLDHPNVMRLEAIVTSRMSDNLYLVFEYMEHDLTGLLASPDVKFTVPQIKCYMQQLLSGLEHCHRRGVLHRDIKGSNLLIDNKGVLKIGDFGLATFFNPDKKQLLTSRVVTLWYRAPELLLGATSYGAAIDMWSVGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPSEQYWKKTKLPHATSFKPQQPYKRQVAETFKDLPSSALELVDVLLSVEPEARSTASSALKSEFFTTAPLPCDPSSLPKYAPSKEYDAKLR-EEKKRRKVESVKGRGPESVRRGHRELKENDPTPEFMAHGQQVHSN-KCASVAYKPHGDAGAGFPLEPSKGLKNTGINHSTSMVHPSA-AVSWSAKAKDETGVTVSGRTNSSIHRGSNLRRQHSH--------------KNEKASSNDNMGQIRKKSRILCSGPLVPAGGSMEDLLKEHEKHIQDAVRKARLDKDKSKKNLGD 624
MGC+CSK T +ND+V E E EKE KSS Q++ P +EE V E R+G SV IS NVGSV KD E++ VER H+R G + + RI S P AEGE A WPSWL SVA +A+ GW PRSA+S+EKL +IGQGTYSSVYKARDL T KIVAMKKVRFVNMDPESVRFMAREI ILR+LDHPNVM+LEA+VTSRMS +LYLVFEYMEHDL GL ASP++KFT PQIKCYMQQL+ GLEHCH RG+LHRDIKGSNLLID+ G+LKIGDFGLATFF PD+ Q LTSRVVTLWYRAPELL GAT YG AID+WS GCILAELF GKPIMPGRTEVEQMHKIFKLCGSPSE+YW+K+KL ATSFKPQ PYKR+VAE FKD PSSAL L+D+LL++EPE R TA+SAL SEFFTT PLPC+PSSLPKY PSKE+DAKLR EE +R+K SVKG GPESVR G RE K+ PTPEF A G QVHSN K SV Y PH D G+GFP+EP +G G +HS SM+HPSA S + K +++ G++ +GRT SS GS +R+Q S+ K+++ D+MG +KK+RI CSGPL+P GG+MED+LKEHE+ IQ+AVRK RLDK ++KKN D
Sbjct: 1 MGCICSKGTSANDYVA--ENEGEKEQNKSSEQVIAPSKREEDVVEVRKGKSDGSVRLISKPTIQANVGSVPAAKDEEEKEKTFVERHTDAKHQRRATMDMVFDGGQQMMSRIVSMPHGAEGEQVAAGWPSWLTSVAGEAIQGWVPRSAESFEKLNQIGQGTYSSVYKARDLNTGKIVAMKKVRFVNMDPESVRFMAREIHILRKLDHPNVMKLEALVTSRMSCSLYLVFEYMEHDLAGLAASPNIKFTEPQIKCYMQQLVRGLEHCHSRGILHRDIKGSNLLIDDNGILKIGDFGLATFFQPDQNQPLTSRVVTLWYRAPELLFGATQYGVAIDLWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEEYWRKSKLTDATSFKPQHPYKRRVAEAFKDFPSSALALIDILLAIEPEKRGTAASALHSEFFTTNPLPCEPSSLPKYPPSKEFDAKLRDEEARRQKAVSVKGHGPESVRMGPRESKQV-PTPEFNAKG-QVHSNSKSTSVRYNPHEDGGSGFPIEPPRGNAKNGYSHSASMIHPSAVGYSQTKKVREDEGLSGTGRTTSSSRNGSEMRKQRSNMPNLSADSSNAYCKKDDRMFGKDSMGYAQKKNRIHCSGPLMPPGGNMEDMLKEHERQIQEAVRKGRLDKARTKKNCYD 660
BLAST of DCAR_003517 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A5B7AC53 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
Query: 1 MGCLCSKATWSNDFVVDYEREKEKE-------SRKSSVQLVPP--KEEFVAESRRG----SVHRIS----NENVGSVRGTKDGEDR---IVERPKSGHHKR--------TGSESIHGRISSNPGAAEGE--ATEWPSWLISVAKDAVHGWTPRSADSYEKLKKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREICILRRLDHPNVMRLEAIVTSRMSDNLYLVFEYMEHDLTGLLASPDVKFTVPQIKCYMQQLLSGLEHCHRRGVLHRDIKGSNLLIDNKGVLKIGDFGLATFFNPDKKQLLTSRVVTLWYRAPELLLGATSYGAAIDMWSVGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPSEQYWKKTKLPHATSFKPQQPYKRQVAETFKDLPSSALELVDVLLSVEPEARSTASSALKSEFFTTAPLPCDPSSLPKYAPSKEYDAKLR-EEKKRRKVESVKGRGPESVRRGHRELKENDPTPEFMAHGQ---QVHSN-KCASVAYKPHGDAGAGFPLEPSKGLKNTGINHSTSMVHPSAA-VSWSAKAKDETGVTVSGRTNSSIHRGSNLRRQ-----------HSHKNEKASSNDNMGQIRKKSRILCSGPLVPAGGSMEDLLKEHEKHIQDAVRKARLDKDKSKKNLGD 624
MGC+C K T +ND+V + E EKE + KSS Q++ P +EE V E +G SV IS N GSV KD E++ VERP + H+R G + + +I S P AEGE A WPSWL SVA +A+ GW PRSA+S+EKL KIGQGTYSSVYKARDLKT KIVAMKKVRFVNMDPESVRFMAREI ILR+LDHPNVM+LEA+VTSRMS +LYLVFEYMEHDL GLLA P +KFT PQIKCYMQQLL GLEHCH RGVLHRDIKGSNLLIDN GVLKIGDFGLATFF PD+ Q LTSRVVTLWYRAPELLLG+T YG AID+WS GCILAELF GKPIMPGRTEVEQMHKIFKLCGSPSE+YW+K+KLPHATSFKP QPY R V+ETFKDLPSSAL L+DVLL++EPE R TA+SAL SEFFTT P PC+PSSLPKY PSKE+DAKLR EE +R+K E VKGRG +SVRRG RE KE PTPEF A GQ Q SN KC SV Y PH D G+GFP+EP +G G +HS+SMVHPSAA SW K +++ G+ +T +S GS LR++ ++H+ E MG + KK+RI CSGPL+P GG+MED+LKEHE+ IQ+AVRK+RLDK ++KKN D
Sbjct: 1 MGCICPKGTSANDYVAENEGEKELNKSSEQVIANKSSEQVIAPSKREEVVVEVDKGKSDGSVRPISKPTIQANAGSVPAAKDEEEKKKTFVERPTNAQHQRRATTDMGVNGGQQMMSQIVSIPHGAEGEQVAAGWPSWLTSVAGEAIQGWVPRSAESFEKLDKIGQGTYSSVYKARDLKTGKIVAMKKVRFVNMDPESVRFMAREIHILRKLDHPNVMKLEALVTSRMSCSLYLVFEYMEHDLAGLLAPPKIKFTEPQIKCYMQQLLHGLEHCHSRGVLHRDIKGSNLLIDNNGVLKIGDFGLATFFQPDQNQPLTSRVVTLWYRAPELLLGSTEYGVAIDLWSAGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEEYWRKSKLPHATSFKPHQPYNRCVSETFKDLPSSALALIDVLLAIEPEKRGTAASALHSEFFTTMPPPCEPSSLPKYPPSKEFDAKLRDEEARRKKAEGVKGRGLDSVRRGSRESKEV-PTPEFDAKGQVSLQGQSNTKCISVRYNPHEDGGSGFPIEPPRGTAKNGFSHSSSMVHPSAAGYSWIRKVREDEGLIGLEQTTNSSRNGSELRQRSNMPHLAADSSNAHRKENRVFGKEMGYVPKKNRIHCSGPLMPPGGNMEDMLKEHERQIQEAVRKSRLDKARTKKNCYD 670
Query: 1 MGCLCSKATWSNDFVVDYEREKEKESRKSSVQLVPP--KEEFVA-----ESRRGSVHRISNENVGSVRGTKDGED---RIVERPKSGHHKRTGS--------ESIHGRISSNPGAAEGE--ATEWPSWLISVAKDAVHGWTPRSADSYEKLKKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREICILRRLDHPNVMRLEAIVTSRMSDNLYLVFEYMEHDLTGLLASPDVKFTVPQIKCYMQQLLSGLEHCHRRGVLHRDIKGSNLLIDNKGVLKIGDFGLATFFNPDKKQLLTSRVVTLWYRAPELLLGATSYGAAIDMWSVGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPSEQYWKKTKLPHATSFKPQQPYKRQVAETFKDLPSSALELVDVLLSVEPEARSTASSALKSEFFTTAPLPCDPSSLPKYAPSKEYDAKLREEK-KRRKVESVKGRGPESVRRGHRELKENDPTPEFMAHGQ---QVHSN-KCASVAYKPHGDAGAGFPLEPSKGLKNTGINHSTSMVHPSA--AVSWSAKAKDETGVTVSGRT-NSSIHRGSNLRRQ-------------HSHKNEKASSNDNMGQIRKKSRILCSGPLVPAGGSMEDLLKEHEKHIQDAVRKARLDKDKSKKNLGD 624
MGC+CSK + ++DFVVD E+E KSSVQ++ P KEE + ES + + N+ SVR KD ED RIVERP SGHH+R + + R+ S P A E E A WPSWL SVA +AV GW PRSADS+EKL KIGQGTYSSVYKARDLKT KIVAMKKVRFVNMDPESVRFMAREI +LR+LDHPNVM+LE +VTSR+S +LYLVFEYMEHDL GL AS +KFT PQIKCY+QQLLSGLEHCH RGVLHRDIKGSNLLIDN GVLKIGDFGLATFF PD+KQ LTSRVVTLWYRAPELLLGAT YG AID+WS GCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPSE+YWKK+KLPHATSFKPQQPY R V ETFKD PSSAL L+DVLL++EPE R TA+SAL SEFF T PL CDPSSLPKY PSKE+D KLREE+ +RRK E+ +GRG ESVRRG RE +E PTPEF A GQ Q SN K SV Y PH D G+GFP++P +G G +HS+SMVHPSA W+ KAK+ G RT SS HR S+LRRQ +S ++++ S+ D+ + KKSRI CSGPL+P G +MED+LKEHE+ IQ+AVRKARLDK ++K+N D
Sbjct: 1 MGCICSKGSNADDFVVD--NVNERELNKSSVQVLSPSKKEEIIVGVVYDESVKTISKPVLQANMSSVRSKKDEEDKKTRIVERPTSGHHQRRATLDALSNDGRATMSRMISLPHATEREQIAAGWPSWLTSVAGEAVQGWLPRSADSFEKLNKIGQGTYSSVYKARDLKTGKIVAMKKVRFVNMDPESVRFMAREIHVLRKLDHPNVMKLEGLVTSRVSGSLYLVFEYMEHDLAGLAASAKIKFTEPQIKCYVQQLLSGLEHCHSRGVLHRDIKGSNLLIDNNGVLKIGDFGLATFFQPDQKQPLTSRVVTLWYRAPELLLGATEYGVAIDLWSAGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPSEEYWKKSKLPHATSFKPQQPYGRCVLETFKDFPSSALALIDVLLAIEPEQRGTAASALNSEFFITKPLACDPSSLPKYLPSKEFDIKLREEEARRRKAEAGRGRGAESVRRGPRECEEV-PTPEFDAQGQITLQGESNPKNISVKYNPHEDGGSGFPIDPPRGFGKNGSSHSSSMVHPSAVGGYLWAKKAKEHEGNNFPVRTIGSSGHR-SDLRRQTSYMPQETTASNAYSKQDDRMSAKDSRVYVSKKSRIHCSGPLMPPGSNMEDMLKEHERQIQEAVRKARLDKARTKRNCYD 661
Query: 1 MGCLCSKATWSNDFVVDYEREKEKESRKSSVQLVPPK-EEFVAESRRGSVHRIS----NENVGSVRGTKDGED---RIVERPKSGHHKRTGS--------ESIHGRISSNPGAAEGE--ATEWPSWLISVAKDAVHGWTPRSADSYEKLKKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREICILRRLDHPNVMRLEAIVTSRMSDNLYLVFEYMEHDLTGLLASPDVKFTVPQIKCYMQQLLSGLEHCHRRGVLHRDIKGSNLLIDNKGVLKIGDFGLATFFNPDKKQLLTSRVVTLWYRAPELLLGATSYGAAIDMWSVGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPSEQYWKKTKLPHATSFKPQQPYKRQVAETFKDLPSSALELVDVLLSVEPEARSTASSALKSEFFTTAPLPCDPSSLPKYAPSKEYDAKLREEK-KRRKVESVKGRGPESVRRGHRELKENDPTPEFMAHG-------QQVHSNKCASVAYKPHGDAGAGFPLEPSKGLKNTGINHSTSMVHPSA-AVSWSAKAKDETGVTVSGRTNSSIHRGSNLRRQHSH--------------KNEKASSNDNMGQIRKKSRILCSGPLVPAGGSMEDLLKEHEKHIQDAVRKARLDKDKSKKNLGD 624
MGC+CSK + ++D+VVD E EKE ++ S P K EE V SVH IS ++ SVR +D E+ RIVERP SGHH+R + ++ +I S P EGE A WPSWL SVA +A+ GW PRSADS+EKL KIGQGTYSSVYKARDLKT K+VAMKKVRFVNMDPESVRFMAREI +LR+LDHPNVM+LE +VTSR+S +LYLVFEYMEHDL GL ASP +KFT PQIKCYMQQLL GLEHCH RGVLHRDIKGSNLLIDN G+LKIGDFGLA FF D+KQ LTSRVVTLWYRAPELLLGAT YG ID+WS GCILAELF GKPIMPGRTEVEQMHKIFK CGSPSE+YW+K+KLPHATSFKPQ PY+R VAETFKD PSSAL L+DVLL++EPE R TA+SAL SEFFTT P PCDP+SLPKY PSKE+D KLREE+ +RRK E+V+GRG ESVRRG RE KE PTPEF G Q + K SV Y PH D G+GFP++P +GL G +HS SMVHPSA +W+ K +D+ GR SS R ++LRRQ ++ K+E S D + + KSRI CSGPL+P GG+MED+LKEHE+ IQ+AVRKARLDK ++K+N D
Sbjct: 1 MGCICSKGSNADDYVVDNETEKEL-NKSSEPSFAPSKREEIVVYDE--SVHTISKPVIQASMSSVRSKQDDEEKKTRIVERPISGHHQRRATLDVVVMEGQAAMSQIISMPHGIEGEQIAAGWPSWLTSVAGEAIQGWVPRSADSFEKLNKIGQGTYSSVYKARDLKTGKVVAMKKVRFVNMDPESVRFMAREIHVLRKLDHPNVMKLEGLVTSRVSGSLYLVFEYMEHDLAGLAASPKIKFTEPQIKCYMQQLLCGLEHCHSRGVLHRDIKGSNLLIDNNGLLKIGDFGLANFFKHDQKQPLTSRVVTLWYRAPELLLGATEYGVGIDLWSAGCILAELFAGKPIMPGRTEVEQMHKIFKFCGSPSEEYWRKSKLPHATSFKPQHPYRRCVAETFKDFPSSALALIDVLLTIEPEQRGTAASALGSEFFTTKPFPCDPASLPKYPPSKEFDVKLREEEARRRKAETVQGRGHESVRRGPRECKEV-PTPEFDTQGLVTLQRPQGEPNPKSISVKYHPHEDGGSGFPIDPPRGLGKNGFSHSASMVHPSAVGYTWTKKVEDQHHCP-EGRIGSSGRR-TDLRRQTTYMPQEGAGLYTNCSKKDEGMSGKDRV-YVPNKSRIHCSGPLMPPGGNMEDMLKEHERQIQEAVRKARLDKARTKRNCYD 658
BLAST of DCAR_003517 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A6N2C9B5 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
Query: 1 MGCLCSKATWSNDFVVDYEREKEKES---------RKSSVQLVPPKEEFVAESRRGSVHRISNENVGSVRGTK---DGEDRIVERPKSGHHKRT-----GSESIHGRISSNPGAAEGE--ATEWPSWLISVAKDAVHGWTPRSADSYEKLKKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREICILRRLDHPNVMRLEAIVTSRMSDNLYLVFEYMEHDLTGLLASPDVKFTVPQIKCYMQQLLSGLEHCHRRGVLHRDIKGSNLLIDNKGVLKIGDFGLATFFNPDKKQLLTSRVVTLWYRAPELLLGATSYGAAIDMWSVGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPSEQYWKKTKLPHATSFKPQQPYKRQVAETFKDLPSSALELVDVLLSVEPEARSTASSALKSEFFTTAPLPCDPSSLPKYAPSKEYDAKLREEK-KRRKVESVKGRGPESVRRGHRELKENDPTPEFMAHGQQVHSNKCASVAYKPHGDAGAGFPLEPSKGLKNTGINHSTSMVHPSAAVSWSAKAKDETGVTVSG----RTNSSIHRG-SNLRRQHSHKNEKASSNDNMGQIRKKSRILCSGPLVPAGGSMEDLLKEHEKHIQDAVRKARLDKDKSKKNLGD 624
MGC+CSK + ++ V +E+++ K S + V+LV PK E + +S+R S + SV TK DG+ RI+ERPK GHHKR G + R+ S P AA+GE A WPSWL SVA DA+ GW PRSADS+EKL KIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREI ILR+LDHPNVM+LE++VTSR+S +LYLVFEYMEHDL GL A+P VKFT QIKCYMQQLL GLEHCH RGVLHRDIKGSNLLID+ GVLKIGDFGLAT F P++ Q LTSRVVTLWYRAPELLLGAT YG AIDMWS GCILAEL GKPIMPGRTEVEQMHKIFKLCGSPSE+YWKK+KLPHATSFKPQ PYKR V +TFKD P SAL LVD+LLS+EPE R TASSAL SEFF+T PLPCDPSSLPKY PSKEYDAK+REE+ +RRK ESVKG G ES+ + R+ K T GQ SN SV Y P ++G GFP+EP + G HSTS++HP++A +S + K+E+ + G R S R + HS +++ +S D+ + KKSR+LCSGPLVP GGSMED+LKEHE+ IQ+AVRKARL+K ++KKN D
Sbjct: 1 MGCICSKGSSEDENV--FEQKEVKSSVHMVAPLHREEIKVELVNPKIEIIPKSKR-----TSESALISVLATKVEDDGKTRIIERPKEGHHKRRSTVDFGVQQSMSRVVSIPYAAKGELGAAGWPSWLTSVAADAIQGWLPRSADSFEKLNKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREISILRKLDHPNVMKLESLVTSRISGSLYLVFEYMEHDLAGLAAAPRVKFTEAQIKCYMQQLLRGLEHCHIRGVLHRDIKGSNLLIDDNGVLKIGDFGLATTFEPNQTQPLTSRVVTLWYRAPELLLGATEYGMAIDMWSAGCILAELSAGKPIMPGRTEVEQMHKIFKLCGSPSEEYWKKSKLPHATSFKPQHPYKRCVTDTFKDFPPSALALVDILLSIEPERRGTASSALNSEFFSTKPLPCDPSSLPKYPPSKEYDAKMREEEARRRKAESVKGCGDESLSKSSRQSKGESTTESIAGQGQ---SNLSISVKYNPLEESGTGFPIEPPRVKNRNGFIHSTSVIHPNSA-GYSRQVKEESCTSQHGGEFLRQGSHTSRAVGDFSSVHSKRDDGSSYGDSTVYVPKKSRLLCSGPLVPPGGSMEDMLKEHERQIQEAVRKARLEKGRTKKNCYD 638
BLAST of DCAR_003517 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A3Q7IWX3 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
Query: 1 MGCLCSKATWSNDFVVDYEREKEKES---------RKSSVQLVPPKEEFVAESRRGSVHRISNENVGSVRGTK---DGEDRIVERPKSGHHKRT-----GSESIHGRISSNPGAAEGE--ATEWPSWLISVAKDAVHGWTPRSADSYEKLKKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREICILRRLDHPNVMRLEAIVTSRMSDNLYLVFEYMEHDLTGLLASPDVKFTVPQIKCYMQQLLSGLEHCHRRGVLHRDIKGSNLLIDNKGVLKIGDFGLATFFNPDKKQLLTSRVVTLWYRAPELLLGATSYGAAIDMWSVGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPSEQYWKKTKLPHATSFKPQQPYKRQVAETFKDLPSSALELVDVLLSVEPEARSTASSALKSEFFTTAPLPCDPSSLPKYAPSKEYDAKLREEK-KRRKVESVKGRGPESVRRGHRELKENDPTPEFMAHGQQVHSNKCASVAYKPHGDAGAGFPLEPSKGLKNTGINHSTSMVHPSAAVSWSAKAKDETGVTVSGRTNSSIHRGSNLRRQ-------HSHKNEKASSNDNMGQIRKKSRILCSGPLVPAGGSMEDLLKEHEKHIQDAVRKARLDKDKSKKNLGD 624
MGC+CSK + ++ V +E+++ K S + V+LV PK E + +S+R S + SV TK DG+ RI+ERPK GHHKR G + R+ S P AA+GE A WPSWL SVA DA+ GW PRSADS+EKL KIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREI ILR+LDHPNVM+LE++VTSR+S +LYLVFEYMEHDL GL A+P VKFT QIKCYMQQLL GLEHCH RGVLHRDIKGSNLLID+ GVLKIGDFGLAT F P++ Q LTSRVVTLWYRAPELLLGAT YG AIDMWS GCILAEL GKPIMPGRTEVEQMHKIFKLCGSPSE+YWKK+KLPHATSFKPQ PYKR V +TFKD P SAL LVD+LLS+EPE R TASSAL SEFF+T PLPCDPSSLPKY PSKEYDAK+REE+ +RRK ESVKG G ES+ + R+ K GQ SN SV Y P ++G GFP+EP + G HSTS++HP++A +S + K+++ + G + +GS+ R HS +++ +S D+ + KKSR+LCSGPLVP GGSMED+LKEHE+ IQ+AVRKARL+K ++KKN D
Sbjct: 1 MGCICSKGSSEDENV--FEQKEVKSSVHMVAPLHREEIKVELVNPKIEIIPKSKR-----TSESALISVLATKVEDDGKTRIIERPKEGHHKRRSTVDFGVQQSMSRVVSIPNAAKGELGAAGWPSWLTSVAADAIQGWLPRSADSFEKLNKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREISILRKLDHPNVMKLESLVTSRISGSLYLVFEYMEHDLAGLAAAPRVKFTEAQIKCYMQQLLRGLEHCHSRGVLHRDIKGSNLLIDDNGVLKIGDFGLATTFEPNQTQPLTSRVVTLWYRAPELLLGATEYGMAIDMWSAGCILAELSAGKPIMPGRTEVEQMHKIFKLCGSPSEEYWKKSKLPHATSFKPQHPYKRCVTDTFKDFPPSALALVDILLSIEPERRGTASSALNSEFFSTKPLPCDPSSLPKYPPSKEYDAKMREEEARRRKAESVKGCGDESLSKSSRQSKGESTIESIAGQGQ---SNLSISVKYNPLEESGTGFPIEPPRVKNRNGFIHSTSVIHPNSA-GYSRQVKEDSCTSQHG--GEFLRQGSHTSRTVGDFSSVHSKRDDGSSYGDSTVYVPKKSRLLCSGPLVPPGGSMEDMLKEHERQIQEAVRKARLEKGRTKKNCYD 638
BLAST of DCAR_003517 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: M1CNT7 ((Cell division protein kinase {ECO:0000313|EnsemblPlants:PGSC0003DMT400071458}))
Query: 1 MGCLCSKATWSNDFVVDYEREKEKESRKSSVQLVPP--KEEFVAESRRGSVH---------RISNENVGSVRGTK---DGEDRIVERPKSGHHKRT-----GSESIHGRISSNPGAAEGE--ATEWPSWLISVAKDAVHGWTPRSADSYEKLKKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREICILRRLDHPNVMRLEAIVTSRMSDNLYLVFEYMEHDLTGLLASPDVKFTVPQIKCYMQQLLSGLEHCHRRGVLHRDIKGSNLLIDNKGVLKIGDFGLATFFNPDKKQLLTSRVVTLWYRAPELLLGATSYGAAIDMWSVGCILAELFVGKPIMPGRTEVEQMHKIFKLCGSPSEQYWKKTKLPHATSFKPQQPYKRQVAETFKDLPSSALELVDVLLSVEPEARSTASSALKSEFFTTAPLPCDPSSLPKYAPSKEYDAKLREEK-KRRKVESVKGRGPESVRRGHRELKENDPTPEFMAHGQQVHSNKCASVAYKPHGDAGAGFPLEPSKGLKNTGINHSTSMVHPSAAVSWSAKAKDETGVTVSG----RTNSSIHRG-SNLRRQHSHKNEKASSNDNMGQIRKKSRILCSGPLVPAGGSMEDLLKEHEKHIQDAVRKARLDKDKSKKNLGD 624
MGC+CSK + +++V + +KE KSSV +V P +EE + + R S + SV TK DG+ RI+ERPK GHHKR G + R+ S P AA+GE A WPSWL SVA +A+ GW PRSADS+EKL KIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREI ILR+LDHPNVM+LEA+VTSR+S +LYLVFEYMEHDL GL A+P VKFT QIKCYMQQLL GLEHCH RGVLHRDIKGSNLLID+ GVLKIGDFGLAT F P++ Q LTSRVVTLWYRAPELLLGAT YG AIDMWS GCILAEL GKPIMPGRTEVEQMHKIFKLCGSPSE+YWKK+KLPHATSFKPQ PYKR V +TFKD P SAL LVD+LLS+EPE R TA SAL SEFF+T PLPCDPSSLPKY PSKEYDAK+REE+ +RRK ESVKG G ES+ + R+ K T GQ SN SV Y P ++G+GF +EP + G HSTS++HP+AA +S K K+++ + G R S R + HS +++ +S D+ + KKSR+LCSGPLVP GGSMED+LKEHE+ IQ+AVRKARL+K ++KKN D
Sbjct: 1 MGCICSKGSSEDEYVFE-----QKEVDKSSVHMVAPLHREEIKVDLVNPKIEIIPMNSKSKRTSESALISVLATKVEDDGKTRIIERPKEGHHKRRSTVDFGVQQSMSRVVSIPNAAKGEFGAAGWPSWLTSVAAEAIQGWLPRSADSFEKLNKIGQGTYSSVYKARDLKTNKIVAMKKVRFVNMDPESVRFMAREISILRKLDHPNVMKLEALVTSRISGSLYLVFEYMEHDLAGLAAAPRVKFTEAQIKCYMQQLLRGLEHCHSRGVLHRDIKGSNLLIDDNGVLKIGDFGLATTFEPNQTQPLTSRVVTLWYRAPELLLGATEYGVAIDMWSAGCILAELSAGKPIMPGRTEVEQMHKIFKLCGSPSEEYWKKSKLPHATSFKPQHPYKRCVTDTFKDFPPSALALVDILLSIEPERRGTAYSALNSEFFSTKPLPCDPSSLPKYPPSKEYDAKIREEEARRRKAESVKGCGDESLSKSSRQSKGESTTESISGQGQ---SNISISVKYNPLEESGSGFLIEPPRVKNRNGFIHSTSVIHPNAA-GYSRKVKEDSCTSQHGGEFLRQGSHTSRAVGDFSSVHSKRDDGSSYGDSTVYVPKKSRLLCSGPLVPPGGSMEDMLKEHERQIQEAVRKARLEKGRTKKNCYD 642
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.
There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.
LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.
Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.
RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.
The NCBI Sequence report lists the correspondences between the various naming methods
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions.
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins.
