Resource Type:
Polypeptide
Name:
DCAR_001244
Identifier:
DCAR_001244.mRNA-protein
Sequence:
MGGGREVEVVNSKGCSRLLVNSISPSVRLVGVQMSHDSASVSTSSTHPHA
PFSGLVICVTGLSKDGRKQVMDVTRRLGGKYSSDLHPKCTHLIVQISFFL
ILLCHGLKYEHALKYGSKNGLFIVTLGWFMDSVRRNVRLDESLYGVKNVG
ENGILRDDSNGLSRYANTENYCIPVGMLEHFKQSDTINQLDVRSTVRDSN
RSMDLILSGSSLFIDTDVPAELQNKIAEAATLQGAKLVNHWIGGGRNASH
VVCEGTSVGKYIGHSDNLVTPLWVLKTAKEKRVPRLVHISVDLARQLGTI
LENVQSGLAVEERNKDTCSSDALKSGTKVSHEARQNMANLAKSGVRKRRV
RRMQRCQTPIRPITPNRLLESVCWSVSEPTCAAAIYTESSGFENAGQDHA
SVFYNANVDEKESIASFVNFTRKLTESEKGAVIFKNHFLTILFPVDRFAE
MGPCSRSFFSDSGFTCLQVLDYIYAFYQENMSKEEVELAIHTDSVHADRL
RSMYSSKETAEHGYMEFKRIDFLGSRKSFEMLKRVPGDDNSNVYELLIKA
*
Sequence Length:
551
Sequence Checksum:
3f24388cbc8ebc384d8f802561cdc1d1
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_001244, derives from mRNA, DCAR_001244. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_001244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_001244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BXE9 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})
HSP 1 Score: 715.301 bits (1845), Expect = 0.000e+0
Identity = 363/550 (66.00%), Postives = 434/550 (78.91%), Query Frame = 0
Match: A0A5B7BXE9 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})
HSP 1 Score: 715.301 bits (1845), Expect = 0.000e+0
Identity = 363/550 (66.00%), Postives = 434/550 (78.91%), Query Frame = 0
Query: 7 VEVVNSKGCSRLLVNSISPSVRLVGVQ----MSHDSAS-VSTSSTHPHAPFSGLVICVTGLSKDGRKQVMDVTRRLGGKYSSDLHPKCTHLIVQISFFLILLCHGLKYEHALKYGSKNGLFIVTLGWFMDSVRRNVRLDESLYGVKNVGENGILRDDSNGLSRYANTENYCIPVGMLEHFKQSDTINQLDVRSTVRDSNRSMDLILSGSSLFIDTDVPAELQNKIAEAATLQGAKLVNHWIGGGRNASHVVCEGTSVGKYIGHSDNLVTPLWVLKTAKEKRVPRLVHISVDLARQLGTILENVQSGLAVEERNKDTCSSDALKSGTKVSHEARQNMANLAKSGVRKRRVRRMQRCQTPIRPITPNRLLESVCWSVSEPTCAAAIYTESSGFENAGQDHASVFYNANVDE-KESIASFVNFTRKLTESEKGAVIFKNHFLTILFPVDRFAEMGPCSRSFFSDSGFTCLQVLDYIYAFYQENMSKEEVELAIHTDSVHADRLRSMYSSKETAEHGYMEFKRIDFLGSRKSFEMLKRVPGDDNSNVYELLIKA 550
VEV+NSKGCSRL V+ IS S R G+Q MS S+S ++ PFSGLVICVTGLSK+ RKQVMD T RLGG+YS++LHP+CTHL+VQ SF HG K+EHALK+GS+NGLF+VTLGWF+DSVRRNVRL+ESLY VK+VGENG+ DD N L +YA TENYC+PVGM EH KQSD I + +R + + RS++ LSG SL++D DV AEL+ K+ EAA +GA ++ W G NASH+VCEG S+ KY+GHS+NLVTPLWVLKTAKEK V RLVHIS DLARQ+GT+L+N Q+G EE D DAL S +K SH+ R + NLAK+GVRKRR RRMQ CQTPIRPITP+ LL+S+CWS+SEPT A+IYT+S E+A + H SVF++A E +ES ASFVN++R LTESEK +IFKNHFLTILFPVDRFAEMGPCSR+FFSD+GFTCLQVLD+IYAFYQENM E+E+AIHTDS HADRLRS+YSSKETAE G + FKRIDFLGSRKSFEMLKRV G++NSNVYELLI+A
Sbjct: 10 VEVINSKGCSRLFVD-ISSSFR--GLQSFEPMSPASSSLIAEPVVRSTGPFSGLVICVTGLSKEARKQVMDATERLGGQYSTNLHPQCTHLVVQ-SF------HGRKFEHALKHGSRNGLFVVTLGWFVDSVRRNVRLNESLYSVKSVGENGMHMDDLNRLVQYAGTENYCLPVGMHEHAKQSDMIEEPHLRFSEKVFKRSVESTLSGHSLYVDLDVSAELRRKVIEAAAGEGATSIDQWFVGC-NASHIVCEGPSIRKYLGHSNNLVTPLWVLKTAKEKHVQRLVHISADLARQVGTMLDNAQNGTYGEEIIGDNGPQDALCSKSKASHDERLKIVNLAKNGVRKRRGRRMQTCQTPIRPITPSGLLDSICWSISEPTSTASIYTDSFSAEDASEHHTSVFFDAKGGEGRESEASFVNYSRPLTESEKTELIFKNHFLTILFPVDRFAEMGPCSRTFFSDTGFTCLQVLDHIYAFYQENMLAHEIEVAIHTDSRHADRLRSVYSSKETAERGSVAFKRIDFLGSRKSFEMLKRVAGENNSNVYELLIRA 548
BLAST of DCAR_001244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A067G254 ((Uncharacterized protein {ECO:0000313|EMBL:KDO73674.1}))
HSP 1 Score: 694.115 bits (1790), Expect = 0.000e+0
Identity = 354/557 (63.55%), Postives = 430/557 (77.20%), Query Frame = 0
Match: A0A067G254 ((Uncharacterized protein {ECO:0000313|EMBL:KDO73674.1}))
HSP 1 Score: 694.115 bits (1790), Expect = 0.000e+0
Identity = 354/557 (63.55%), Postives = 430/557 (77.20%), Query Frame = 0
Query: 1 MGGGREVEVVNSKGCSRLLVNSISPSVRLV--GVQ----MSHDSASVSTSSTHP-HAPFSGLVICVTGLSKDGRKQVMDVTRRLGGKYSSDLHPKCTHLIVQISFFLILLCHGLKYEHALKYGSKNGLFIVTLGWFMDSVRRNVRLDESLYGVKNVGENGILRDDSNGLSRYANTENYCIPVGMLEHFKQSDTINQLDVRSTVRDSNRSMDLILSGSSLFIDTDVPAELQNKIAEAATLQGAKLVNHWIGGGRNASHVVCEGTSVGKYIGHSDNLVTPLWVLKTAKEKRVPRLVHISVDLARQLGTILENVQSGLAVEERNKDTCSSDALKSGTKVSHEARQNMANLAKSGVRKRRVRRMQRCQTPIRPITPNRLLESVCWSVSEPTCAAAIYTESSGFENAGQDHASVFYNANVDEKESIASFVNFTRKLTESEKGAVIFKNHFLTILFPVDRFAEMGPCSRSFFSDSGFTCLQVLDYIYAFYQENMSKEEVELAIHTDSVHADRLRSMYSSKETAEHGYMEFKRIDFLGSRKSFEMLKRVPGDDNSNVYELLIKA 550
MGGG VEVV+SKGCSRL + S+ PS+R + GVQ MS S+S+++ S P +APFSGLVICVTGLSK+ RKQVM+ T RLGG+YS DLHP+CTHL+VQ SF G K+EHALK+GS+NGL+IVTLGWF+DSVRRNVRL ESLY VK++ E+G+ D N L +A TEN C+P G+ E KQ + + + RDSNRSM+ LSG S+++D+DV EL+NK+ EAAT +GA LVN W G AS+VVCE SV KY+GHS+NLVTP+WVLKTAKEK V RLVHIS DLARQ+G +LEN+Q+G+A EE N DA K+S E RQ NLAK+GVR RR RRMQ CQTPIRP+TP+ LL+S+CWS+SEPT A+IYT+S E+ + H SVF++A D K+S ASF N TR LTESEK +IFKNHFLTILFPVDRFAEMGP SR++FSD+GFTCLQVLDYIY FYQE+MS EVE AIHTDS H+DRLR++Y+SKETAE GY+ F+RI+FLGSRKSFEMLKRV GD+NSNVYELL++A
Sbjct: 1 MGGGGRVEVVSSKGCSRLFLGSV-PSLRRLRGGVQSFESMSPASSSLASDSVLPANAPFSGLVICVTGLSKEARKQVMEATERLGGQYSPDLHPQCTHLVVQ-SF------GGRKFEHALKHGSRNGLYIVTLGWFVDSVRRNVRLSESLYTVKSIDEHGMHLDKLNRLVGFAGTENSCLPAGIYEA-KQFNATGKHE-----RDSNRSMNSTLSGCSMYVDSDVSEELRNKVFEAATNEGATLVNQWFVGC-GASYVVCEEDSVQKYMGHSNNLVTPVWVLKTAKEKHVQRLVHISADLARQVGMMLENIQNGIAREEINGGNVPEDAQSCKNKISQEKRQQTVNLAKNGVRSRRSRRMQTCQTPIRPLTPSSLLDSICWSISEPTSTASIYTDSFSGEDVNEHHPSVFFDAEADGKDSEASFANLTRMLTESEKSELIFKNHFLTILFPVDRFAEMGPSSRTYFSDNGFTCLQVLDYIYEFYQESMSAHEVESAIHTDSRHSDRLRAVYASKETAECGYVTFRRIEFLGSRKSFEMLKRVSGDNNSNVYELLLRA 542
BLAST of DCAR_001244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: V4WHM6 ((Uncharacterized protein {ECO:0000313|EMBL:ESR66189.1}))
HSP 1 Score: 680.633 bits (1755), Expect = 0.000e+0
Identity = 348/551 (63.16%), Postives = 424/551 (76.95%), Query Frame = 0
Match: V4WHM6 ((Uncharacterized protein {ECO:0000313|EMBL:ESR66189.1}))
HSP 1 Score: 680.633 bits (1755), Expect = 0.000e+0
Identity = 348/551 (63.16%), Postives = 424/551 (76.95%), Query Frame = 0
Query: 7 VEVVNSKGCSRLLVNSISPSVRLV--GVQ----MSHDSASVSTSSTHP-HAPFSGLVICVTGLSKDGRKQVMDVTRRLGGKYSSDLHPKCTHLIVQISFFLILLCHGLKYEHALKYGSKNGLFIVTLGWFMDSVRRNVRLDESLYGVKNVGENGILRDDSNGLSRYANTENYCIPVGMLEHFKQSDTINQLDVRSTVRDSNRSMDLILSGSSLFIDTDVPAELQNKIAEAATLQGAKLVNHWIGGGRNASHVVCEGTSVGKYIGHSDNLVTPLWVLKTAKEKRVPRLVHISVDLARQLGTILENVQSGLAVEERNKDTCSSDALKSGTKVSHEARQNMANLAKSGVRKRRVRRMQRCQTPIRPITPNRLLESVCWSVSEPTCAAAIYTESSGFENAGQDHASVFYNANVDEKESIASFVNFTRKLTESEKGAVIFKNHFLTILFPVDRFAEMGPCSRSFFSDSGFTCLQVLDYIYAFYQENMSKEEVELAIHTDSVHADRLRSMYSSKETAEHGYMEFKRIDFLGSRKSFEMLKRVPGDDNSNVYELLIKA 550
VEVV+SKGCSRL + S+ PS+R + GVQ MS S+S+++ S P +APFSGLVICVTGLSK+ RKQVM+ T RLGG+YS DLHP+CTHL+VQ SF G K+EHALK+GS+NGL+IVTLGWF+DSVRRNVRL ESLY VK++ E+G+ D N L +A TEN C+P G+ E KQ + + + RDSNRSM+ LSG S+++D+DV EL+NK+ EAAT +GA LVN W G AS+VVCE SV KY+GHS+NLVTP+WVLKTAKEK V RLVHIS DLARQ+G +LEN+Q+G+A EE N DA K+S E RQ NLAK+GVR RR RRMQ CQTPIRP+TP+ LL+S+CWS+SEPT A+IYT+S E+ + H SVF++A D K+S ASF N TR LTESEK +IFKNH+LTILFPVDRFAEMGP SR++FSD+GFTCLQVLDYIY FYQE+MS EVE AIHTDS H+DRLR+ Y+SKETAE GY+ F+RI+FLGS KSFEMLKRV GD+NSNVYELL++A
Sbjct: 8 VEVVSSKGCSRLFLGSV-PSLRRLRGGVQSFESMSPASSSLASDSVLPSNAPFSGLVICVTGLSKEARKQVMEATERLGGQYSPDLHPQCTHLVVQ-SF------GGRKFEHALKHGSRNGLYIVTLGWFVDSVRRNVRLSESLYTVKSIDEHGMHLDKLNRLVGFAGTENSCLPAGIYEA-KQFNATGKHE-----RDSNRSMNSTLSGCSMYVDSDVSEELRNKVFEAATNEGATLVNQWFVGC-GASYVVCEEDSVQKYMGHSNNLVTPVWVLKTAKEKHVQRLVHISADLARQVGMMLENIQNGIAREEINGGNVPEDAQSCKNKISQEKRQQTVNLAKNGVRSRRSRRMQTCQTPIRPLTPSSLLDSICWSISEPTSTASIYTDSFSGEDVNEHHPSVFFDAEADGKDSEASFANLTRMLTESEKSELIFKNHYLTILFPVDRFAEMGPSSRTYFSDNGFTCLQVLDYIYEFYQESMSAHEVESAIHTDSRHSDRLRAAYASKETAECGYVTFRRIEFLGSCKSFEMLKRVSGDNNSNVYELLLRA 543
BLAST of DCAR_001244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A5C2S2 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})
HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0
Identity = 338/559 (60.47%), Postives = 411/559 (73.52%), Query Frame = 0
Match: A5C2S2 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})
HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0
Identity = 338/559 (60.47%), Postives = 411/559 (73.52%), Query Frame = 0
Query: 7 VEVVNSKGCSRLLVNSISPSVRLVGVQMSHDSASVSTSSTHPHAPFSGLVICVTGLSKDGRKQVMDVTRRLGGKYSSDLHPKCTHLIVQISFFLILLCH---------------GLKYEHALKYGSKNGLFIVTLGWFMDSVRRNVRLDESLYGVKNVGENGILRDDSNGLSRYANTENYCIPVGMLEHFKQSDTINQLDVRSTVRDSNRSMDLILSGSSLFIDTDVPAELQNKIAEAATLQGAKLVNHWIGGGRNASHVVCEGTSVGKYIGHSDNLVTPLWVLKTAKEKRVPRLVHISVDLARQLGTILENVQSGLAVEERNKDTCSSDALKSGTKVSHEARQNMANLAKSGVRKRRVRRMQRCQTPIRPITPNRLLESVCWSVSEPTCAAAIYTESSGFENAGQDHASVFYNANVDEKESIASFVNFTRKLTESEKGAVIFKNHFLTILFPVDRFAEMGPCSRSFFSDSGFTCLQVLDYIYAFYQENMSKEEVELAIHTDSVHADRLRSMYSSKETAEHGYMEFKRIDFLGSRKSFEMLKRVPGDDNSNVYELLIKA 550
VEV++SKGCSRLLV S + G++ + S+S + PFSGLVICVTGLSK+ RKQVMD T RLGG+YS +LHP+CTHL+V F+ +LC G K +HALK+GSKNGLF+VTLGWF+DSVRRNVRL ESLY VKNVGENG+ D+ N L ++ EN C+P GM E+ KQS + + R+S RS+D LSG S+FID+D+ AEL+NK+ EAA GA LV+ W G NA++VVCEG S+ +Y+GHS+NLVTPLW+LKTAKE+ RLVH+S DLARQ+G +LENVQ+G+ +EE N++ D K SHE RQ + +LAK+GVR RR R MQ CQTPIRPI P+ LL+S+CWS+SEPT A+IYTESS + + SVF++A D KES ASF NF+R LTESEK +IFK HFLTIL P DRFAEMGP SR+FFS GFTCLQVLD+IYAFYQENM+ E+E AIHTDS HADRLRS+YSSKET E GY FKRIDFLGSRKSFEMLKRV GD+NSNVYEL+I+A
Sbjct: 11 VEVISSKGCSRLLVGISSSLPPMRGLKTFEPMSPASSSVGRSNGPFSGLVICVTGLSKEARKQVMDATERLGGQYSPNLHPQCTHLVV---FYDFMLCFETLSCGLFNTFYSFGGRKLDHALKHGSKNGLFVVTLGWFVDSVRRNVRLSESLYYVKNVGENGVRMDELNRLIGFSGAENSCLPAGMFENAKQSVMTEDPHLWFSGRESKRSVDSTLSGHSMFIDSDISAELRNKVVEAAARGGAMLVDQWFVGC-NANYVVCEGPSIQRYLGHSNNLVTPLWILKTAKERYAQRLVHMSADLARQVGMVLENVQNGIELEEMNRENGPQDTPCPRKKASHEERQEIVSLAKAGVRNRRARYMQTCQTPIRPINPSSLLDSICWSISEPTSTASIYTESSSVGDVSEHQTSVFFDAKGDGKESEASFANFSRLLTESEKAELIFKGHFLTILLPXDRFAEMGPSSRTFFSSKGFTCLQVLDHIYAFYQENMTLHEIEAAIHTDSRHADRLRSVYSSKETGERGYAIFKRIDFLGSRKSFEMLKRVSGDNNSNVYELVIRA 565
BLAST of DCAR_001244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BBW7 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})
HSP 1 Score: 676.781 bits (1745), Expect = 0.000e+0
Identity = 350/555 (63.06%), Postives = 424/555 (76.40%), Query Frame = 0
Match: A0A5J5BBW7 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})
HSP 1 Score: 676.781 bits (1745), Expect = 0.000e+0
Identity = 350/555 (63.06%), Postives = 424/555 (76.40%), Query Frame = 0
Query: 6 EVEVVNSKGCSRLLVNSISPSVRLVGVQ----MSHDSAS-VSTSSTHPHAPFSGLVICVTGLSKDGRKQVMDVTRRLGGKYSSDLHPKCTHLIVQISFFLILLCHGLKYEHALKYGSKNGLFIVTLGWFMDSVRRNVRLDESLYGVKNVGENGILRDDSNGLSRYANTENYCIPVGMLEHFKQSDTINQL-----DVRSTVRDSNRSMDLILSGSSLFIDTDVPAELQNKIAEAATLQGAKLVNHWIGGGRNASHVVCEGTSVGKYIGHSDNLVTPLWVLKTAKEKRVPRLVHISVDLARQLGTILENVQSGLAVEERNKDTCSSDALKSGTKVSHEARQNMANLAKSGVRKRRVRRMQRCQTPIRPITPNRLLESVCWSVSEPTCAAAIYTESSGFENAGQDHASVFYNANVDEKESIASFVNFTRKLTESEKGAVIFKNHFLTILFPVDRFAEMGPCSRSFFSDSGFTCLQVLDYIYAFYQENMSKEEVELAIHTDSVHADRLRSMYSSKETAEHGYMEFKRIDFLGSRKSFEMLKRVPGDDNSNVYELLIKA 550
+VEV+NSKGCSRL V+ S G+Q MS S+S V+ PFSG+VICVTGLSK+ RKQVMD T RLGG+YS +LHP+CTHL+VQ SF +G K+EHALK+G +NGLF+VTLGWF+DSVRRNVRL+ESLY V++VGENG+ +D N L +YA TEN C+PVG+ +H KQSD I + DV RSM+ LSG SLF+D DV EL++K+ EAA +GA L++ W G NASH+VCEG S+ KY+GHS+NLVTPLWVLKTAKEKRV RLVHIS DLARQ+GT+L+NVQ+G+ EE D A+ S +K SH+ R + NLAK+GVRKRR RRMQ CQTPI PITP+ LL+S+CWS+SEPT A+IYT+S E+ + H SVF++A + ES ASFVNF+R LTESEK +IFKNHFLTI+FPVDRFAEMGPCSR+FF+++GFTCLQVLD IYAFYQENM E+E+AIHTDS HADRLRS+YS TAE GY+ FKRIDFLGSRKSFEMLKRV GD+NSNVYELLI+A
Sbjct: 9 KVEVINSKGCSRLFVDISSSFPSFRGLQSFQPMSPASSSLVAEREVRSTRPFSGVVICVTGLSKEARKQVMDATERLGGQYSPNLHPQCTHLVVQ-SF------NGRKFEHALKHGLRNGLFVVTLGWFVDSVRRNVRLNESLYSVRSVGENGMHMNDLNRLIQYAGTENSCLPVGLHDHTKQSDMIEEPHCFPEDV------FKRSMESTLSGHSLFVDLDVSTELRSKVIEAAAGEGATLLDQWFVGC-NASHIVCEGPSIRKYLGHSNNLVTPLWVLKTAKEKRVQRLVHISADLARQVGTMLDNVQNGM--EEIIGDNGPQYAVCSKSKASHDERIKIVNLAKNGVRKRRGRRMQTCQTPIHPITPSSLLDSICWSISEPTSTASIYTDSFSAEDGSEHHTSVFFDAKGEGGESEASFVNFSRLLTESEKTELIFKNHFLTIMFPVDRFAEMGPCSRTFFNETGFTCLQVLDLIYAFYQENMLGHEIEVAIHTDSRHADRLRSVYS---TAERGYVAFKRIDFLGSRKSFEMLKRVSGDNNSNVYELLIRA 544
BLAST of DCAR_001244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6U5U0 ((uncharacterized protein LOC113707408 isoform X2 {ECO:0000313|RefSeq:XP_027085521.1}))
HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0
Identity = 349/563 (61.99%), Postives = 416/563 (73.89%), Query Frame = 0
Match: A0A6P6U5U0 ((uncharacterized protein LOC113707408 isoform X2 {ECO:0000313|RefSeq:XP_027085521.1}))
HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0
Identity = 349/563 (61.99%), Postives = 416/563 (73.89%), Query Frame = 0
Query: 1 MGGGREVEVVNSKGCSRLL--VNSISPSVRLVGVQMS--HDSASVSTSS--------THPHAPFSGLVICVTGLSKDGRKQVMDVTRRLGGKYSSDLHPKCTHLIVQISFFLILLCHGLKYEHALKYGSKNGLFIVTLGWFMDSVRRNVRLDESLYGVKNVGENGILRDDSNGLSRYANTENYCIPVGMLEHFKQSDTINQLDVRSTVRDSNR-SMDLILSGSSLFIDTDVPAELQNKIAEAATLQGAKLVNHWIGGGRNASHVVCEGTSVGKYIGHSDNLVTPLWVLKTAKEKRVPRLVHISVDLARQLGTILENVQSGLAVEERNKDTCSSDALKSGTKVSHEARQNMANLAKSGVRKRRVRRMQRCQTPIRPITPNRLLESVCWSVSEPTCAAAIYTESSGFENAGQDHASVFYNANVDEKESIASFVNFTRKLTESEKGAVIFKNHFLTILFPVDRFAEMGPCSRSFFSDSGFTCLQVLDYIYAFYQENMSKEEVELAIHTDSVHADRLRSMYSSKETAEHGYMEFKRIDFLGSRKSFEMLKRVPGDDNSNVYELLIKA 550
MGGG +VEV++SKGCSRL+ +++ S+R G Q S + VS +S P PFSGLVICVTGLSK+ R QVM T++LGG+YS LHP+CTHL+VQ SF G K+EHALK+GSK GL +VTLGWF+DSVRRNVRL E+LY VK +GE G+ DD N L TE C+P G LE+ S+ + R+S R +M +LSG S +ID DV AELQ+K+ EAA+ +GA LV+ W G +ASHVVCEG SVGKY+GHS+N+VTPLWVLKTAKEKR+ RLVHIS DLARQ T ++ +Q+G E+ C DA S KVSHE RQ + NLAK VRKRR RMQ CQTP+RPITP+ LL+SVCWS+SEPT +A IYTESS E+A VF++A D KES ASFVN +R LTESEK +IFK+HFLTILFPVDRF+EMGPCSR+FFSD GFTCLQVLD+IYAFYQENMS EVE+A+HTDS HADRLRS+YSSK TAE GY+EFKRIDFLGSRKSFEMLKRV GD+NSNVYELLI+A
Sbjct: 1 MGGGGKVEVISSKGCSRLVAEISTSFSSLRGHGFQSSAMEPMSPVSVASGVDESGRKNRPRGPFSGLVICVTGLSKEARAQVMAATQKLGGEYSPHLHPQCTHLVVQ-SF------SGRKFEHALKHGSKLGLSVVTLGWFVDSVRRNVRLSETLYSVKTIGE-GVAADDLNRLVHNMGTEKSCLPFGSLEYTDNSNMTGGPQLHFPERESKRRNMSSLLSGYSFYIDADVSAELQSKVVEAASGEGANLVDQWYVGC-SASHVVCEGPSVGKYLGHSNNIVTPLWVLKTAKEKRLQRLVHISADLARQTATTIDAIQTGTCREKFGGSICLQDAPTSMLKVSHEERQKIINLAKDWVRKRRNCRMQTCQTPMRPITPSSLLDSVCWSISEPTSSATIYTESSSVEDANDQDTFVFFDAKADGKESEASFVNLSRPLTESEKSELIFKSHFLTILFPVDRFSEMGPCSRTFFSDKGFTCLQVLDHIYAFYQENMSATEVEVALHTDSRHADRLRSVYSSKTTAERGYLEFKRIDFLGSRKSFEMLKRVSGDNNSNVYELLIRA 554
BLAST of DCAR_001244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6U4G7 ((uncharacterized protein LOC113707408 isoform X1 {ECO:0000313|RefSeq:XP_027085520.1}))
HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0
Identity = 349/563 (61.99%), Postives = 416/563 (73.89%), Query Frame = 0
Match: A0A6P6U4G7 ((uncharacterized protein LOC113707408 isoform X1 {ECO:0000313|RefSeq:XP_027085520.1}))
HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0
Identity = 349/563 (61.99%), Postives = 416/563 (73.89%), Query Frame = 0
Query: 1 MGGGREVEVVNSKGCSRLL--VNSISPSVRLVGVQMS--HDSASVSTSS--------THPHAPFSGLVICVTGLSKDGRKQVMDVTRRLGGKYSSDLHPKCTHLIVQISFFLILLCHGLKYEHALKYGSKNGLFIVTLGWFMDSVRRNVRLDESLYGVKNVGENGILRDDSNGLSRYANTENYCIPVGMLEHFKQSDTINQLDVRSTVRDSNR-SMDLILSGSSLFIDTDVPAELQNKIAEAATLQGAKLVNHWIGGGRNASHVVCEGTSVGKYIGHSDNLVTPLWVLKTAKEKRVPRLVHISVDLARQLGTILENVQSGLAVEERNKDTCSSDALKSGTKVSHEARQNMANLAKSGVRKRRVRRMQRCQTPIRPITPNRLLESVCWSVSEPTCAAAIYTESSGFENAGQDHASVFYNANVDEKESIASFVNFTRKLTESEKGAVIFKNHFLTILFPVDRFAEMGPCSRSFFSDSGFTCLQVLDYIYAFYQENMSKEEVELAIHTDSVHADRLRSMYSSKETAEHGYMEFKRIDFLGSRKSFEMLKRVPGDDNSNVYELLIKA 550
MGGG +VEV++SKGCSRL+ +++ S+R G Q S + VS +S P PFSGLVICVTGLSK+ R QVM T++LGG+YS LHP+CTHL+VQ SF G K+EHALK+GSK GL +VTLGWF+DSVRRNVRL E+LY VK +GE G+ DD N L TE C+P G LE+ S+ + R+S R +M +LSG S +ID DV AELQ+K+ EAA+ +GA LV+ W G +ASHVVCEG SVGKY+GHS+N+VTPLWVLKTAKEKR+ RLVHIS DLARQ T ++ +Q+G E+ C DA S KVSHE RQ + NLAK VRKRR RMQ CQTP+RPITP+ LL+SVCWS+SEPT +A IYTESS E+A VF++A D KES ASFVN +R LTESEK +IFK+HFLTILFPVDRF+EMGPCSR+FFSD GFTCLQVLD+IYAFYQENMS EVE+A+HTDS HADRLRS+YSSK TAE GY+EFKRIDFLGSRKSFEMLKRV GD+NSNVYELLI+A
Sbjct: 5 MGGGGKVEVISSKGCSRLVAEISTSFSSLRGHGFQSSAMEPMSPVSVASGVDESGRKNRPRGPFSGLVICVTGLSKEARAQVMAATQKLGGEYSPHLHPQCTHLVVQ-SF------SGRKFEHALKHGSKLGLSVVTLGWFVDSVRRNVRLSETLYSVKTIGE-GVAADDLNRLVHNMGTEKSCLPFGSLEYTDNSNMTGGPQLHFPERESKRRNMSSLLSGYSFYIDADVSAELQSKVVEAASGEGANLVDQWYVGC-SASHVVCEGPSVGKYLGHSNNIVTPLWVLKTAKEKRLQRLVHISADLARQTATTIDAIQTGTCREKFGGSICLQDAPTSMLKVSHEERQKIINLAKDWVRKRRNCRMQTCQTPMRPITPSSLLDSVCWSISEPTSSATIYTESSSVEDANDQDTFVFFDAKADGKESEASFVNLSRPLTESEKSELIFKSHFLTILFPVDRFSEMGPCSRTFFSDKGFTCLQVLDHIYAFYQENMSATEVEVALHTDSRHADRLRSVYSSKTTAERGYLEFKRIDFLGSRKSFEMLKRVSGDNNSNVYELLIRA 558
BLAST of DCAR_001244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: B9RQZ2 ((Topbp1, putative {ECO:0000313|EMBL:EEF46163.1}))
HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0
Identity = 342/553 (61.84%), Postives = 418/553 (75.59%), Query Frame = 0
Match: B9RQZ2 ((Topbp1, putative {ECO:0000313|EMBL:EEF46163.1}))
HSP 1 Score: 672.929 bits (1735), Expect = 0.000e+0
Identity = 342/553 (61.84%), Postives = 418/553 (75.59%), Query Frame = 0
Query: 6 EVEVVNSKGCSRLLV--NSISPSVRLVGVQ----MSHDSASVSTSST--HPHAPFSGLVICVTGLSKDGRKQVMDVTRRLGGKYSSDLHPKCTHLIVQISFFLILLCHGLKYEHALKYGSKNGLFIVTLGWFMDSVRRNVRLDESLYGVKNVGENGILRDDSNGLSRYANTENYCIPVGMLEHFKQSDTINQLDVRSTVRDSNRSMDLILSGSSLFIDTDVPAELQNKIAEAATLQGAKLVNHWIGGGRNASHVVCEGTSVGKYIGHSDNLVTPLWVLKTAKEKRVPRLVHISVDLARQLGTILENVQSGLAVEERNKDTCSSDALKSGTKVSHEARQNMANLAKSGVRKRRVRRMQRCQTPIRPITPNRLLESVCWSVSEPTCAAAIYTESSGFENAGQDHASVFYNANVDEKESIASFVNFTRKLTESEKGAVIFKNHFLTILFPVDRFAEMGPCSRSFFSDSGFTCLQVLDYIYAFYQENMSKEEVELAIHTDSVHADRLRSMYSSKETAEHGYMEFKRIDFLGSRKSFEMLKRVPGDDNSNVYELLIKA 550
+VEV+NSKGCSRL V +S PS R G+Q MS +AS+ + + PFSGLVICVTGLS++ RKQVM+ T RLGG+YS +LHP CTHL+VQISF+ G K+EHALK+GSKNGLF+VT+GWF+DSVRRNVRL ESLY VK+VGE + DD N L TEN C+PVG+ + K+ D I L R + R SNR++D LSGSS+FID+++ EL+NK+ EAA +GA ++ W G +ASHVVCEG SV +Y+GHS+NLVTPLWVLKTAKEK RLVH+S DLARQ+G +LEN Q+G A +E N + D ++VS+ RQ++ N AK+ VR RR RRMQ CQTPIRPITP+ LL+S+CWS+SEPT A+IYT+S E+ + H SVF++A D K+S ASF N TR LTESEK +IFKNHFLTILFPVDRF+EMGP SR+FF ++GFTC+QVLDYIY FYQENM EVE AIHTDS HADRLR++YSSKETAE GY+ FKRIDFLGSR SFEMLKRV GD+NSNVYELLI+A
Sbjct: 13 KVEVINSKGCSRLFVGLSSSIPSFR--GLQSFEPMSPTTASIGSEAVLVRSTGPFSGLVICVTGLSREARKQVMEATERLGGRYSPNLHPHCTHLVVQISFYF----GGRKFEHALKHGSKNGLFVVTIGWFVDSVRRNVRLSESLYSVKSVGETDVRLDDLNRLVGINGTENSCLPVGINDA-KKFDAIEGLHKRLSARSSNRNIDSTLSGSSMFIDSEISDELRNKVYEAAIREGATFLDQWFIGC-SASHVVCEGASVQRYLGHSNNLVTPLWVLKTAKEKNAQRLVHLSADLARQVGMMLENFQNGSAEQEINTGSAPLDVRNLRSQVSYGQRQHIVNFAKNAVRSRRGRRMQTCQTPIRPITPSSLLDSICWSISEPTSTASIYTDSFSSEDVSE-HPSVFFDAKGDGKDSEASFANLTRALTESEKTELIFKNHFLTILFPVDRFSEMGPSSRTFFGENGFTCIQVLDYIYTFYQENMPASEVEAAIHTDSRHADRLRTVYSSKETAELGYVIFKRIDFLGSRTSFEMLKRVSGDNNSNVYELLIRA 556
BLAST of DCAR_001244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6H2U1 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})
HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 331/517 (64.02%), Postives = 396/517 (76.60%), Query Frame = 0
Match: F6H2U1 (BRCT domain-containing protein {ECO:0000259|PROSITE:PS50172})
HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 331/517 (64.02%), Postives = 396/517 (76.60%), Query Frame = 0
Query: 34 MSHDSASVSTSSTHPHAPFSGLVICVTGLSKDGRKQVMDVTRRLGGKYSSDLHPKCTHLIVQISFFLILLCHGLKYEHALKYGSKNGLFIVTLGWFMDSVRRNVRLDESLYGVKNVGENGILRDDSNGLSRYANTENYCIPVGMLEHFKQSDTINQLDVRSTVRDSNRSMDLILSGSSLFIDTDVPAELQNKIAEAATLQGAKLVNHWIGGGRNASHVVCEGTSVGKYIGHSDNLVTPLWVLKTAKEKRVPRLVHISVDLARQLGTILENVQSGLAVEERNKDTCSSDALKSGTKVSHEARQNMANLAKSGVRKRRVRRMQRCQTPIRPITPNRLLESVCWSVSEPTCAAAIYTESSGFENAGQDHASVFYNANVDEKESIASFVNFTRKLTESEKGAVIFKNHFLTILFPVDRFAEMGPCSRSFFSDSGFTCLQVLDYIYAFYQENMSKEEVELAIHTDSVHADRLRSMYSSKETAEHGYMEFKRIDFLGSRKSFEMLKRVPGDDNSNVYELLIKA 550
MS S+SV S + PFSGLVICVTGLSK+ RKQVMD RLGG+YS +LHP+CTHL+VQISF LI G K +HALK+GSKNGLF+VTLGWF+DSVRRNVRL ESLY VKNVGENG+ D+ N L ++ EN C+P GM E+ KQS + + R+S RS+D LSG S+FID+D+ AEL+NK+ EAA GA LV+ W G NA++VVCEG S+ +Y+GHS+NLVTPLW+LKTAKE+ RLVH+S DLARQ+G +LENVQ+G+ +EE N++ D K SHE RQ + +LAK+GVR RR R MQ CQTPIRPI P+ LL+S+CWS+SEPT A+IYTESS + + SVF++A D KES ASF NF+R LTESEK +IFK HFLTIL PVDRFAEMGP SR+FFS GFTCLQVLD+IYAFYQENM+ E+E AIHTDS HADRLRS+YSSKET E GY FKRIDFLGSRKSFEMLKRV GD+NSNVYEL+I+A
Sbjct: 1 MSPASSSVGRS----NGPFSGLVICVTGLSKEARKQVMDAAERLGGQYSPNLHPQCTHLVVQISFNLIF--GGRKLDHALKHGSKNGLFVVTLGWFVDSVRRNVRLSESLYYVKNVGENGVRMDELNRLIGFSGAENSCLPAGMFENAKQSVMTEDPHLWFSGRESKRSVDSTLSGHSMFIDSDISAELRNKVVEAAARGGAMLVDQWFVGC-NANYVVCEGPSIQRYLGHSNNLVTPLWILKTAKERYAQRLVHMSADLARQVGMVLENVQNGIELEEMNRENGPQDTPCPRKKASHEERQEIVSLAKAGVRNRRARYMQTCQTPIRPINPSSLLDSICWSISEPTSTASIYTESSSVGDVSEHQTSVFFDAKGDGKESEASFANFSRLLTESEKAELIFKGHFLTILLPVDRFAEMGPSSRTFFSSKGFTCLQVLDHIYAFYQENMTLHEIEAAIHTDSRHADRLRSVYSSKETGERGYAIFKRIDFLGSRKSFEMLKRVSGDNNSNVYELVIRA 510
BLAST of DCAR_001244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068VG79 ((Uncharacterized protein {ECO:0000313|EMBL:CDP19691.1}))
HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0
Identity = 347/563 (61.63%), Postives = 413/563 (73.36%), Query Frame = 0
Match: A0A068VG79 ((Uncharacterized protein {ECO:0000313|EMBL:CDP19691.1}))
HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0
Identity = 347/563 (61.63%), Postives = 413/563 (73.36%), Query Frame = 0
Query: 1 MGGGREVEVVNSKGCSRLL--VNSISPSVRLVGVQMS--HDSASVSTSS--------THPHAPFSGLVICVTGLSKDGRKQVMDVTRRLGGKYSSDLHPKCTHLIVQISFFLILLCHGLKYEHALKYGSKNGLFIVTLGWFMDSVRRNVRLDESLYGVKNVGENGILRDDSNGLSRYANTENYCIPVGMLEHFKQSDTINQLDVRSTVRDSNR-SMDLILSGSSLFIDTDVPAELQNKIAEAATLQGAKLVNHWIGGGRNASHVVCEGTSVGKYIGHSDNLVTPLWVLKTAKEKRVPRLVHISVDLARQLGTILENVQSGLAVEERNKDTCSSDALKSGTKVSHEARQNMANLAKSGVRKRRVRRMQRCQTPIRPITPNRLLESVCWSVSEPTCAAAIYTESSGFENAGQDHASVFYNANVDEKESIASFVNFTRKLTESEKGAVIFKNHFLTILFPVDRFAEMGPCSRSFFSDSGFTCLQVLDYIYAFYQENMSKEEVELAIHTDSVHADRLRSMYSSKETAEHGYMEFKRIDFLGSRKSFEMLKRVPGDDNSNVYELLIKA 550
MGGG +VEV++SKGCSRL+ +++ S+R G Q S + VS +S P PFSGLVICVTGLSK+ R QVM T++LGG+YS LHP+CTHL Q F G K+EHALK+GSK GL +VTLGWF+DSVRRNVRL E+LY VK +GE G+ DD N L TE C+P G LE+ S+ + R+S R +M +LSG S +ID DV AELQ+K+ EAA+ +GA LV+ W G +ASHVVCEG SVGKY+GHS+N+VTPLWVLKTAKEKR+ RLVHIS DLARQ T ++ +Q+G E+ C DA S KVSHE RQ + NLAK VRKRR RMQ CQTP+RPITP+ LL+SVCWS+SEPT +A IYTESS E+A VF++A D KES ASFVN +R LTESEK +IFK+HFLTILFPVDRF+EMGPCSR+FFSD GFTCLQVLD+IYAFYQENMS EVE+A+HTDS HADRLRS+YSSK TAE GY+EFKRIDFLGSRKSFEMLKRV GD+NSNVYELLI+A
Sbjct: 1 MGGGGKVEVISSKGCSRLVAEISTSFSSLRGHGFQSSAMEPMSPVSVASGVDESGRKNRPRGPFSGLVICVTGLSKEARAQVMAATQKLGGEYSPHLHPQCTHLHFQPFF------SGRKFEHALKHGSKLGLSVVTLGWFVDSVRRNVRLSETLYSVKTIGE-GVAADDLNRLVHNMGTEKSCLPFGSLEYTDNSNMTGGPQLHFPERESKRRNMSSLLSGYSFYIDADVSAELQSKVVEAASGEGANLVDQWYVGC-SASHVVCEGPSVGKYLGHSNNIVTPLWVLKTAKEKRLQRLVHISADLARQTATTIDAIQTGTCREKFGGSICLQDAPTSMLKVSHEERQKIINLAKDWVRKRRNCRMQTCQTPMRPITPSSLLDSVCWSISEPTSSATIYTESSSVEDANDQDTFVFFDAKADGKESEASFVNLSRPLTESEKSELIFKSHFLTILFPVDRFSEMGPCSRTFFSDKGFTCLQVLDHIYAFYQENMSATEVEVALHTDSRHADRLRSVYSSKTTAERGYLEFKRIDFLGSRKSFEMLKRVSGDNNSNVYELLIRA 555
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7BXE9 | E-Value: 0.000e+0, PID: 66.00 | BRCT domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A067G254 | E-Value: 0.000e+0, PID: 63.55 | (Uncharacterized protein {ECO:0000313|EMBL:KDO7367... [more] |
| V4WHM6 | E-Value: 0.000e+0, PID: 63.16 | (Uncharacterized protein {ECO:0000313|EMBL:ESR6618... [more] |
| A5C2S2 | E-Value: 0.000e+0, PID: 60.47 | BRCT domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A5J5BBW7 | E-Value: 0.000e+0, PID: 63.06 | BRCT domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A6P6U5U0 | E-Value: 0.000e+0, PID: 61.99 | (uncharacterized protein LOC113707408 isoform X2 {... [more] |
| A0A6P6U4G7 | E-Value: 0.000e+0, PID: 61.99 | (uncharacterized protein LOC113707408 isoform X1 {... [more] |
| B9RQZ2 | E-Value: 0.000e+0, PID: 61.84 | (Topbp1, putative {ECO:0000313|EMBL:EEF46163.1})[more] |
| F6H2U1 | E-Value: 0.000e+0, PID: 64.02 | BRCT domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A068VG79 | E-Value: 0.000e+0, PID: 61.63 | (Uncharacterized protein {ECO:0000313|EMBL:CDP1969... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |