DCAR_004125

Resource Type: 
Polypeptide
Name: 
DCAR_004125
Identifier: 
DCAR_004125.mRNA-protein
Sequence: 
MGRFNWEIFGQVLVGLMSTLVVCQGFTDPRDVAAINNLYGALGTPPLIGW
VQAGGDPCTEGWQGVQCVNANITAIALNGANLGGVLGESLGVFASIIQID
LGNNHIGGIIPSNLPTTTRILSLSGNQFTGTIPETFSTLGQLTDMSLSNN
HLTGVIPDTFQQLTGDLSGNNLEGQLPPSLGNLLSLTKLHLQDNQLTGTL
DVLQDLPLIDLDVENNLFSGPVPDKLLGIPNFRRAGNPFNTTVLSSPPAS
PPSAPPIGSPPSEQVPRIRPNEPSNPETSSSSKGENFLSKRIVWIVVAGL
VIVIVVALGLCLSQKDTEPKKEVAAAVPKRNEASAVPRRNEVAGVSKQND
VAEVARHRDEHEIDMPVSDEYILPPPPLPPLNNPFEKVIIRPNVPPVRSR
KQSMEKLSSVRTFSIASLQQYTNSFSQENLLGGGKLGTVYRSELPDGKLL
AVKKLDGAASKNQTDDDFLEFVSRVSELQHVNIVQLVGFCCEHGQRLLVY
EYCGNGTVYEALHIDDEIHKNLSWNARVRLALQSARALEYLHEVCQPPIV
HQNFTSANVLLDDGFAVRVSDCGLAPLISSNYVTQFQGSGYGAPELEMGN
YTCQSDVYSFGVVMLELLTGRKAYDRSCPRGEQFLVRWAAPQLHDIDALS
RMVDPSLKGTYPSKSLSRLADIISLCVQPEPEFRPPMSEIVEDLQHMVGR
ARTRDDI*
Sequence Length: 
708
Sequence Checksum: 
cbcb6da2f3284e25e4e411c483b4104f
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, DCAR_004125, derives from mRNA, DCAR_004125.
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Blast Results: 
The following BLAST results are available for this feature:
BLAST of DCAR_004125 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_004125 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BSE8 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 882.863 bits (2280), Expect = 0.000e+0
Identity = 479/756 (63.36%), Postives = 555/756 (73.41%), Query Frame = 0
 
Query:    1 MGRFNWEIFGQVLVGLMSTLV--VCQGFTDPRDVAAINNLYGALGTPPLIGWVQAGGDPCTEGWQGVQCVNANITAIALNGANLGGVLGESLGVFASIIQIDLGNNHIGGIIPSNLPTTTRILSLSGNQFTGTIPETFSTLGQLTDMSLSNNHLTGVIPDTFQQLTG----DLSGNNLEGQLPPSLGNLLSLTKLHLQDNQLTGTLDVLQDLPLIDLDVENNLFSGPVPDKLLGIPNFRRAGNPFNTTVLSSPPASPPSAPPIGSPPS------EQVPRIRPNEPSNPETSSSSKGENFLSK-RIVWIVVAGLVIVIVVALGLCLSQKDTEPKKEVAAAVPKRNEASA------VPRRNEV--------------------------AGVS---------KQND---VAEVARHRDEHEIDMPVSDEYIL-PPPPLPPLNNPFEKVIIRPNVPPVRSRKQSMEKLSSVRTFSIASLQQYTNSFSQENLLGGGKLGTVYRSELPDGKLLAVKKLDGAASKNQTDDDFLEFVSRVSELQHVNIVQLVGFCCEHGQRLLVYEYCGNGTVYEALHIDDEIHKNLSWNARVRLALQSARALEYLHEVCQPPIVHQNFTSANVLLDDGFAVRVSDCGLAPLISSNYVTQFQGSGYGAPELEMGNYTCQSDVYSFGVVMLELLTGRKAYDRSCPRGEQFLVRWAAPQLHDIDALSRMVDPSLKGTYPSKSLSRLADIISLCVQPEPEFRPPMSEIVEDLQHMV 698
            M  F WEI+ ++ +GLM      +C GFTDPRDV AIN+LY ALG PPL GWV  GGDPC EGWQGV CVNANIT I L+GANLGG LG +L  FASIIQI+L NNHIGGIIPSN P T R   LSGNQFTG+IP+T S+L QL+DMS S+NHLTG IPD FQQLTG    DLSGNNL GQLPPSLGNLLSLT LHLQ+NQLTGTL+VLQDLPL DL+VENNLFSGP+PDKLL IPNFRR GNPFNTT++ +PPA PPS     SP S      E     + N PS PET +S++G   L+  R+ WI +AG +I IV ALGL L        ++      KR+E  A       P  NE                            G S         ++ D   VA +++ +++HEIDM   D  IL PPP  P    P EKV + P VPP  +R  S + L+SVR+F+IASLQQYTNSFSQENL+G G LGTVYR+E+P GKLLA+KKL  AAS+ Q+D+DFLE VS VS+LQH NIV+L+G+C EHGQ+LLVY+YC NGT++EALH+DDEIHK LSWN R+RLAL +ARALEYLHE CQPPIVH+NF SAN+LLDD  AVRVSDCGLAPLISS+  +Q QG GYGAPELE+G+YT QSDVYSFGVVMLELLTGRK+YDRS PRGEQFL+RWA PQLHDIDALS+MVDPSL G YPSKSLSR ADIISLCVQPEPEFRPPMSEIV++L HM+
Sbjct:    1 MYCFYWEIYVRIFMGLMVIFAPPICHGFTDPRDVFAINSLYAALGFPPLPGWVPIGGDPCAEGWQGVLCVNANITGIVLSGANLGGQLGNNLESFASIIQIELSNNHIGGIIPSNFPVTIRSFFLSGNQFTGSIPDTLSSLSQLSDMSFSDNHLTGEIPDAFQQLTGLINLDLSGNNLNGQLPPSLGNLLSLTTLHLQNNQLTGTLNVLQDLPLRDLNVENNLFSGPIPDKLLSIPNFRRDGNPFNTTIIPTPPAIPPSPSSPSSPSSSRAPSPEVTSGTQANGPSVPETPNSARGGKVLTTTRVTWIAIAGFLIFIVFALGLWLFMSRCCKGRQATNKFSKRHEMVAHNDPKEKPEHNEFLLKPSNFTEKVPKEAVLRPAVGYEIDHGTSSLRLKPEAERETDFKRVAAISKQKEDHEIDMTGMDVNILQPPPSPPTSLLPVEKVNVNPIVPPKTTRGHSTKCLNSVRSFTIASLQQYTNSFSQENLIGRGMLGTVYRAEVPSGKLLAIKKLGTAASRQQSDEDFLELVSSVSKLQHANIVELLGYCGEHGQQLLVYQYCNNGTLHEALHLDDEIHKKLSWNTRIRLALGAARALEYLHEGCQPPIVHRNFKSANILLDDELAVRVSDCGLAPLISSSSASQLQGYGYGAPELELGSYTYQSDVYSFGVVMLELLTGRKSYDRSRPRGEQFLIRWAIPQLHDIDALSKMVDPSLNGVYPSKSLSRFADIISLCVQPEPEFRPPMSEIVQNLLHMI 756    
BLAST of DCAR_004125 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U8BED2 ((protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X2 {ECO:0000313|RefSeq:XP_010278328.1}))

HSP 1 Score: 838.18 bits (2164), Expect = 0.000e+0
Identity = 438/751 (58.32%), Postives = 528/751 (70.31%), Query Frame = 0
 
Query:    1 MGRFNWEIFGQVLVGLMSTLV--VCQGFTDPRDVAAINNLYGALGTPPLIGWVQAGGDPCTEGWQGVQCVNANITAIALNGANLGGVLGESLGVFASIIQIDLGNNHIGGIIPSNLPTTTRILSLSGNQFTGTIPETFSTLGQLTDMSLSNNHLTGVIPDTFQQLTG----DLSGNNLEGQLPPSLGNLLSLTKLHLQDNQLTGTLDVLQDLPLIDLDVENNLFSGPVPDKLLGIPNFRRAGNPFNTTVLSSPPASPPSAPPIGS--PPSEQVPRIRPNEP-SNPET-SSSSKGENFLSKRIVWIVVAGLVIVIVVALGLCLSQKDTEPKKEVAAAVPKRNEASAVPRRNEVAGVSK----QNDVAEVARHRDEHEIDM-------PVSDEYILPPPPLPPLNN----------------------PFEKVIIR---PNVPPVRSRKQSMEKLSSVRTFSIASLQQYTNSFSQENLLGGGKLGTVYRSELPDGKLLAVKKLDGAASKNQTDDDFLEFVSRVSELQHVNIVQLVGFCCEHGQRLLVYEYCGNGTVYEALHIDDEIHKNLSWNARVRLALQSARALEYLHEVCQPPIVHQNFTSANVLLDDGFAVRVSDCGLAPLISSNYVTQFQGS-----GYGAPELEMGNYTCQSDVYSFGVVMLELLTGRKAYDRSCPRGEQFLVRWAAPQLHDIDALSRMVDPSLKGTYPSKSLSRLADIISLCVQPEPEFRPPMSEIVEDLQHMVGR 700
            M  F WE + +V  G++      V  G+T P DV+AIN+LY ALG+PPL GW+  GGDPC E WQGVQC ++NITAI LNGANLGG LGE+LG F SI  IDL NNHIGG IPSNLP T +   LS NQFTG+IP + ++L QLTDMSL+NNHLTG IPD FQ LTG    DLS NNL GQLPPS+ NL SLT LHLQDNQL+GTLDVLQDLPL DL++ENNLFSGP+PDKLLGIPNF++ GNPFNTTV  +P   P S PP  S  PPSE+    +   P S P+   S+   +   +KR++WI + G++I I++ L L L       ++E A    KR+E  +  +  +           N + +V R RDEH ID+          D        +  L+N                      P EKVI+    P    +R   +SM  ++SV +F+IASLQQYTNSFSQENL+GGG LG  YR+ELPDGKLLAVKKLD AAS+ QTD++FLE VS +S+L+H N+++L G+C EHGQ+LL+YEYC NGT+++ALH DDEI++ LSWNAR+++AL +ARALEYLHEVCQPPIVH+NF SAN+LLDD   VRVSDCGL+PLISS  V+Q  G      GYGAPE E G YT QSDVYSFGVVMLELLTGRK+YDRS PRGEQ L RWA  QLHDIDALSRMVDPSL G YP+KSLSR ADIISLC+QPEPEFRPPMSEIV++L HM+ R
Sbjct:    1 MDHFIWETYARVFFGMIVIFSAPVSDGYTIPSDVSAINSLYTALGSPPLPGWIANGGDPCLEAWQGVQCADSNITAIILNGANLGGELGENLGSFVSIASIDLSNNHIGGSIPSNLPLTMKNFFLSDNQFTGSIPSSLASLTQLTDMSLNNNHLTGEIPDAFQSLTGLINMDLSSNNLSGQLPPSMENLSSLTTLHLQDNQLSGTLDVLQDLPLRDLNIENNLFSGPIPDKLLGIPNFKKDGNPFNTTV--APSHQPASRPPHVSRAPPSEEARGKQAKGPTSAPQGPDSTKTKKFLTTKRVIWISITGVLIFIIIVLALALLASKCCKEREEADIFSKRHEIISTYKETKEKETQSMDWPNNQMEKVLRPRDEHGIDIGRLGAVPKAKDNSKSDIKRMGELSNLKEDHEIDVSGIDMVLMPPPPPPAEKVIVNTILPTATTLRPPLKSMNPIASVSSFTIASLQQYTNSFSQENLIGGGMLGNAYRAELPDGKLLAVKKLDNAASRRQTDEEFLELVSSISKLKHANVIKLEGYCAEHGQKLLIYEYCSNGTLHDALHSDDEINRKLSWNARIQMALGAARALEYLHEVCQPPIVHRNFKSANILLDDELVVRVSDCGLSPLISSGAVSQLSGQLLSAYGYGAPEFESGTYTYQSDVYSFGVVMLELLTGRKSYDRSRPRGEQHLARWAITQLHDIDALSRMVDPSLNGVYPAKSLSRFADIISLCIQPEPEFRPPMSEIVQNLLHMIQR 749    
BLAST of DCAR_004125 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U8BAQ5 ((protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 {ECO:0000313|RefSeq:XP_010278322.1, ECO:0000313|RefSeq:XP_010278323.1}))

HSP 1 Score: 838.18 bits (2164), Expect = 0.000e+0
Identity = 439/757 (57.99%), Postives = 535/757 (70.67%), Query Frame = 0
 
Query:    1 MGRFNWEIFGQVLVGLMSTLV--VCQGFTDPRDVAAINNLYGALGTPPLIGWVQAGGDPCTEGWQGVQCVNANITAIALNGANLGGVLGESLGVFASIIQIDLGNNHIGGIIPSNLPTTTRILSLSGNQFTGTIPETFSTLGQLTDMSLSNNHLTGVIPDTFQQLTG----DLSGNNLEGQLPPSLGNLLSLTKLHLQDNQLTGTLDVLQDLPLIDLDVENNLFSGPVPDKLLGIPNFRRAGNPFNTTVLSSPPASPPSAPPIGS--PPSEQVPRIRPNEP-SNPET-SSSSKGENFLSKRIVWIVVAGLVIVIVVALGLCL-----------------------SQKDTEPKKEVAAAVPKRNEASAVPRRNEVAGV----------SKQNDVAEVARH------RDEHEIDMPVSDEYILPPPPLPPLNNPFEKVIIR---PNVPPVRSRKQSMEKLSSVRTFSIASLQQYTNSFSQENLLGGGKLGTVYRSELPDGKLLAVKKLDGAASKNQTDDDFLEFVSRVSELQHVNIVQLVGFCCEHGQRLLVYEYCGNGTVYEALHIDDEIHKNLSWNARVRLALQSARALEYLHEVCQPPIVHQNFTSANVLLDDGFAVRVSDCGLAPLISSNYVTQFQGS-----GYGAPELEMGNYTCQSDVYSFGVVMLELLTGRKAYDRSCPRGEQFLVRWAAPQLHDIDALSRMVDPSLKGTYPSKSLSRLADIISLCVQPEPEFRPPMSEIVEDLQHMVGR 700
            M  F WE + +V  G++      V  G+T P DV+AIN+LY ALG+PPL GW+  GGDPC E WQGVQC ++NITAI LNGANLGG LGE+LG F SI  IDL NNHIGG IPSNLP T +   LS NQFTG+IP + ++L QLTDMSL+NNHLTG IPD FQ LTG    DLS NNL GQLPPS+ NL SLT LHLQDNQL+GTLDVLQDLPL DL++ENNLFSGP+PDKLLGIPNF++ GNPFNTTV  +P   P S PP  S  PPSE+    +   P S P+   S+   +   +KR++WI + G++I I++ L L L                       + K+T+ K+  +   P      AV R  +  G+          +K N  +++ R       +++HEID+   D  ++PP        P EKVI+    P    +R   +SM  ++SV +F+IASLQQYTNSFSQENL+GGG LG  YR+ELPDGKLLAVKKLD AAS+ QTD++FLE VS +S+L+H N+++L G+C EHGQ+LL+YEYC NGT+++ALH DDEI++ LSWNAR+++AL +ARALEYLHEVCQPPIVH+NF SAN+LLDD   VRVSDCGL+PLISS  V+Q  G      GYGAPE E G YT QSDVYSFGVVMLELLTGRK+YDRS PRGEQ L RWA  QLHDIDALSRMVDPSL G YP+KSLSR ADIISLC+QPEPEFRPPMSEIV++L HM+ R
Sbjct:    1 MDHFIWETYARVFFGMIVIFSAPVSDGYTIPSDVSAINSLYTALGSPPLPGWIANGGDPCLEAWQGVQCADSNITAIILNGANLGGELGENLGSFVSIASIDLSNNHIGGSIPSNLPLTMKNFFLSDNQFTGSIPSSLASLTQLTDMSLNNNHLTGEIPDAFQSLTGLINMDLSSNNLSGQLPPSMENLSSLTTLHLQDNQLSGTLDVLQDLPLRDLNIENNLFSGPIPDKLLGIPNFKKDGNPFNTTV--APSHQPASRPPHVSRAPPSEEARGKQAKGPTSAPQGPDSTKTKKFLTTKRVIWISITGVLIFIIIVLALALLASKCCKEREEADIFSKRHEIISTYKETKEKETQSMDWPNNQMEKAVLRPRDEHGIDIGRLGAVPKAKDNSKSDIKRMGELSNLKEDHEIDVSGIDMVLMPP-----PPPPAEKVIVNTILPTATTLRPPLKSMNPIASVSSFTIASLQQYTNSFSQENLIGGGMLGNAYRAELPDGKLLAVKKLDNAASRRQTDEEFLELVSSISKLKHANVIKLEGYCAEHGQKLLIYEYCSNGTLHDALHSDDEINRKLSWNARIQMALGAARALEYLHEVCQPPIVHRNFKSANILLDDELVVRVSDCGLSPLISSGAVSQLSGQLLSAYGYGAPEFESGTYTYQSDVYSFGVVMLELLTGRKSYDRSRPRGEQHLARWAITQLHDIDALSRMVDPSLNGVYPAKSLSRFADIISLCIQPEPEFRPPMSEIVQNLLHMIQR 750    
BLAST of DCAR_004125 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3X979 ((protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X1 {ECO:0000313|RefSeq:XP_016436490.1}))

HSP 1 Score: 830.091 bits (2143), Expect = 0.000e+0
Identity = 432/725 (59.59%), Postives = 532/725 (73.38%), Query Frame = 0
 
Query:   23 CQGFTDPRDVAAINNLYGALGTPPLIGWVQAGGDPCTEGWQGVQCVNANITAIALNGANLGGVLGESLGVFASIIQIDLGNNHIGGIIPSNLPTTTRILSLSGNQFTGTIPETFSTLGQLTDMSLSNNHLTGVIPDTFQQLTG----DLSGNNLEGQLPPSLGNLLSLTKLHLQDNQLTGTLDVLQDLPLIDLDVENNLFSGPVPDKLLGIPNFRRAGNPFNTTVLSSPPASPPSAP-PIGSPPSEQVPRIRPNEPSNP--ETSSSSKGENFLSKRIVWIVVAGLVIVIVVALGLCL---------SQKDTEPKKEVAAA------VPKRNEASAVPRRN--------------EVAGVSKQNDVAEVARHRD------------EHEIDMPVSDEYILPPPPLPPLNN-PFEKVIIRPNVPPVRSRKQSMEKLSSVRTFSIASLQQYTNSFSQENLLGGGKLGTVYRSELPDGKLLAVKKLDGAASKNQTDDDFLEFVSRVSELQHVNIVQLVGFCCEHGQRLLVYEYCGNGTVYEALHIDDEIHKNLSWNARVRLALQSARALEYLHEVCQPPIVHQNFTSANVLLDDGFAVRVSDCGLAPLISSNYVTQFQGSGYGAPELEMGNYTCQSDVYSFGVVMLELLTGRKAYDRSCPRGEQFLVRWAAPQLHDIDALSRMVDPSLKGTYPSKSLSRLADIISLCVQPEPEFRPPMSEIVEDLQHMV 698
            C+GFTDPRDV AIN+LY +LG P L GWV  G DPC + W GV CVN+N+TAI LN +NLGG L E +G FASIIQIDL NNHIGG IPSNLP T + LSLSGNQ TG+IP+T S+LGQL+D+SL+NNHL+GVIPD FQQL      DLSGN+L GQLPPS+GNL SLT LHLQ+NQL+G LDVLQDL L DL++ENNLFSGP+P KLL IP FRRAGNPFNTT++ SP  SP  AP  + SP  +  P +    PS    + S   K  N  +K + +I +AGL+ ++++ LG+CL          Q   E K+  A A       PK +++   P  +              +  G +   + +E  +H+             + E++  +SD  ILPPPP P L+    E++++ P +PP+ S + + + ++S   F+IASLQQYTNSFSQ+NL+GGG LGTVYR+E P  KLLAVKKLD A ++ Q+D +F+E VS +S L+H NIV+LVG+C EHGQRLLVYEYC NGT++EALH+DDEIH+ LSW+ RVR+ALQ+ARALEYLHEVC PPIVHQNF SANVLLDD  AVR+SDCGLAPL+SS+  TQ QG GYGAPELE+G+Y+CQSDVYSFGVVMLELLTGRK+YDRS PRGEQ LVRWA P+LHDID+LSRMVDPSL G+YPSKSLSR ADIISLC+Q EPEFRPPMSEIV++L HM+
Sbjct:   25 CKGFTDPRDVFAINSLYTSLGYPLLPGWVPYGLDPCGDKWHGVLCVNSNVTAIVLNDSNLGGELSEGIGSFASIIQIDLSNNHIGGSIPSNLPVTVKTLSLSGNQLTGSIPDTLSSLGQLSDLSLNNNHLSGVIPDAFQQLKTLINMDLSGNSLSGQLPPSMGNLSSLTTLHLQNNQLSGILDVLQDLALTDLNIENNLFSGPIPAKLLSIPTFRRAGNPFNTTIIPSPVISPSPAPFAVLSP--DVAPSLPSTVPSGQGLQHSGRQKSSNS-TKHVKFIAIAGLLTLVILGLGVCLLMSRYLKRRRQTQKEAKRHHAYAYSSPKGTPKHDQSVQKPYYDAEKDAGLRPGTGNGKAQGRNISLNTSEAVQHKGMKSTTSYTDNDLDSEMESTISD--ILPPPPPPFLSALSAERMVVNPILPPITSDRHAKKNVNSAEFFTIASLQQYTNSFSQDNLIGGGMLGTVYRAESPK-KLLAVKKLDTAVTRRQSDQEFVEMVSNISRLKHENIVKLVGYCSEHGQRLLVYEYCRNGTLHEALHLDDEIHRKLSWSTRVRIALQAARALEYLHEVCHPPIVHQNFKSANVLLDDELAVRMSDCGLAPLMSSDSTTQLQGCGYGAPELELGSYSCQSDVYSFGVVMLELLTGRKSYDRSRPRGEQLLVRWAIPRLHDIDSLSRMVDPSLNGSYPSKSLSRFADIISLCIQSEPEFRPPMSEIVQNLLHMI 743    
BLAST of DCAR_004125 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9HR28 ((Serine/threonine protein kinase {ECO:0000313|EMBL:PIN19750.1}) (2.7.11.1 {ECO:0000313|EMBL:PIN19750.1}))

HSP 1 Score: 819.691 bits (2116), Expect = 0.000e+0
Identity = 433/731 (59.23%), Postives = 515/731 (70.45%), Query Frame = 0
 
Query:    1 MGRFNWEIFGQVLVGLMSTLVV---CQGFTDPRDVAAINNLYGALGTPPLIGWVQAGGDPCTE-GWQGVQCVNANITAIALNGANLGGVLGESLGVFASIIQIDLGNNHIGGIIPSNLPTTTRILSLSGNQFTGTIPETFSTLGQLTDMSLSNNHLTGVIPDTFQQLTG----DLSGNNLEGQLPPSLGNLLSLTKLHLQDNQLTGTLDVLQDLPLIDLDVENNLFSGPVPDKLLGIPNFRRAGNPFNTTVLSSPPASPPSAPPIGSPPSEQVPRIRPNEPSN---PETSSSSKGENFLSKRIVWIVVAGLVIVIVVALGLCLSQKDTEPKKEVAAAVPKRNEASAV---------------------PRRNEVAGVSKQNDVAEVARHRDEHEIDMPVSDEYILPPPPLP-PLNNPFEKVIIRPNVPPVRSRKQSMEKLSSVRTFSIASLQQYTNSFSQENLLGGGKLGTVYRSELPDGKLLAVKKLDGAASKNQTDDDFLEFVSRVSELQHVNIVQLVGFCCEHGQRLLVYEYCGNGTVYEALHIDDEIHKNLSWNARVRLALQSARALEYLHEVCQPPIVHQNFTSANVLLDDGFAVRVSDCGLAPLISSNYVTQFQGSGYGAPELEMGNYTCQSDVYSFGVVMLELLTGRKAYDRSCPRGEQFLVRWAAPQLHDIDALSRMVDPSLKGTYPSKSLSRLADIISLCVQPEPEFRPPMSEIVEDLQHMV 698
            M    W I   VL G++ T       +GFTDPRDV AI  L+  LG P + GW+  GGDPC +  WQGV+CVN+NITAI LNGA+LGG L E LG FASII IDL NN IGG IPSNLP T R   LS NQFTG IP+T S+LGQLTD+SL+ N LTG IPD F+ L      DLSGNNL  QLPPS+GNL SLT LHLQ+NQL G LDVLQDLPLIDL+VENNLFSGP+PDKLL IPNFRRAGNPFNTT+L S PAS P  PP  +P      R  P+ PS+   PE     K     S +I WI + GL +VIV+ +GLCL       ++ ++    K +E                             E AG   Q   A + + +D H IDM    +   P  PLP PL +  E+++  P   P+ SR  +   + S + F+IASLQQYTNSFSQEN +G G LGTVYR++LP+G +LAVKKLD AAS + +D +FLE VS +S+L+H NIV+LVG+C EHGQRLLVY YC NGT+ EAL++D EI+KNLSWNAR+R+ALQ+A+ALEYLHEVCQPPIVH+NF S NVLL+D    RVSDCGLAPL S+N +TQ QGSGYGAPELE+G+Y+ Q+DVYSFGVVML+LLTGRK+YDRS PR EQ LVRWA  +LHDIDALSRMVDPSL G YPSKSLSR+ADIISLC+QPEPEFRPPMSEIV+ L HM+
Sbjct:    1 MASLGWNIRAWVL-GILVTFSAMPPVEGFTDPRDVYAITQLHAFLGFPLIPGWI-PGGDPCGQPSWQGVECVNSNITAIKLNGASLGGELNEDLGSFASIILIDLSNNQIGGAIPSNLPITLRSFFLSDNQFTGRIPDTLSSLGQLTDLSLNGNRLTGPIPDAFEPLKSLINMDLSGNNLTSQLPPSMGNLSSLTTLHLQNNQLIGVLDVLQDLPLIDLNVENNLFSGPIPDKLLTIPNFRRAGNPFNTTILPSAPASSPVLPPSEAPSPHSPRRAHPHGPSSSPLPEIGMERKKNT--SSKITWIAIKGLFVVIVLLVGLCLYMSRCCKRQRLSEETAKMHEMGTYGVVQETHKKDPSSLNTIYKVQKASKEPAGGGSQTKTALLKQGKD-HTIDMTGLGDTDRPTSPLPFPLLSA-ERIVADPTFTPLNSRGNASNIVESAKFFTIASLQQYTNSFSQENFIGKGTLGTVYRAQLPNGMVLAVKKLDKAASGHLSDREFLELVSSISKLRHANIVELVGYCLEHGQRLLVYNYCRNGTLDEALNLDYEINKNLSWNARMRVALQAAKALEYLHEVCQPPIVHRNFKSCNVLLEDDLTARVSDCGLAPLFSTNSITQLQGSGYGAPELELGSYSYQTDVYSFGVVMLQLLTGRKSYDRSRPRAEQNLVRWAFSRLHDIDALSRMVDPSLNGAYPSKSLSRVADIISLCIQPEPEFRPPMSEIVQKLLHMI 725    
BLAST of DCAR_004125 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A0V0IUP6 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})

HSP 1 Score: 814.683 bits (2103), Expect = 0.000e+0
Identity = 436/742 (58.76%), Postives = 527/742 (71.02%), Query Frame = 0
 
Query:   23 CQGFTDPRDVAAINNLYGALGTPPLIGWVQAGGDPCTEGWQGVQCVNANITAIALNGANLGGVLGESLGVFASIIQIDLGNNHIGGIIPSNLPTTTRILSLSGNQFTGTIPETFSTLGQLTDMSLSNNHLTGVIPDTFQQLTG----DLSGNNLEGQLPPSLGNLLSLTKLHLQDNQLTGTLDVLQDLPLIDLDVENNLFSGPVPDKLLGIPNFRRAGNPFNTT-------------VLSSPPASPPSAPPIGSPPSEQVPRIRPNEPSNPETSSSSKGENFLSKRIVWIVVAGLVIVIVVALGLCL-----------SQKDTEPKKEVAAAVPKRNEASAVPRRNE-----------------VAGVSK---------------QNDVAEVARHRDEH---EIDMPVSDEYILPPPPLPPLNN-PFEKVIIRPNVPPVRSRKQSMEKLSSVRTFSIASLQQYTNSFSQENLLGGGKLGTVYRSELPDGKLLAVKKLDGAASKNQTDDDFLEFVSRVSELQHVNIVQLVGFCCEHGQRLLVYEYCGNGTVYEALHIDDEIHKNLSWNARVRLALQSARALEYLHEVCQPPIVHQNFTSANVLLDDGFAVRVSDCGLAPLISSNYVTQFQGSGYGAPELEMGNYTCQSDVYSFGVVMLELLTGRKAYDRSCPRGEQFLVRWAAPQLHDIDALSRMVDPSLKGTYPSKSLSRLADIISLCVQPEPEFRPPMSEIVEDLQHMVGR 700
            CQGFTDPRDV AIN+LY +LG P L GWV  G DPC + W GV CVN+N+T I LN +NLGG L E +G FASIIQIDL NNHIGG IPSNLP T + LSLSGNQ TG+IP+  S+LGQLTD+SL+NNHL GVIPD F QL      DLSGN+L GQLPPS+G L SLT LHLQ+NQL+G LDVLQDL L DL++ENNLFSGP+P KLL IP FRRAGNPFNTT               +  P   PS P I  PP +++      +PS  + SS+S      +K +  I +AGLV ++++ LG+CL           +QK+T+  +    ++PK   A   P+ ++                 VAG  K               Q DV     + D+    E++  +SD  +LPPPP P L     E++++ P VP + S K +M+ ++S   F+IASLQQYTNSFSQ+NL+GGG LGTVYR+E P  KLLAVKKLD A +K Q+D +F+E VS +S+LQH NIV+LVG+C EHGQRLLVYEYC NGT++EALH+DD+IH+ LSW+ RVR+ALQ+ARALEYLHEVCQPPIVH NF S NVLLDD  AV +SDCGLAPL+SS+ + Q QGSGYGAPELE+GNYTCQSDVYSFGVVMLELLTGR++YDRS PRGEQ LVRWA P+LHDIDALSRMVDPSL G YPSKSLSR ADIISLC+QPEPEFRPPMSEIV++L  M+ R
Sbjct:   25 CQGFTDPRDVFAINSLYTSLGYPLLPGWVPYGLDPCVDLWHGVLCVNSNVTGIVLNDSNLGGELSEGIGSFASIIQIDLSNNHIGGSIPSNLPVTLKTLSLSGNQLTGSIPDNISSLGQLTDLSLNNNHLNGVIPDAFLQLKTLINMDLSGNSLSGQLPPSVGTLSSLTTLHLQNNQLSGILDVLQDLALTDLNIENNLFSGPIPPKLLSIPTFRRAGNPFNTTIIPSPPMISPSPAPFALSPDLAPSLPYI-VPPGQEL------QPSGRQKSSNS------TKHVKLIAIAGLVSLVILGLGVCLLMSRFCKRRRETQKETKRHETYDHSLPK---AKGNPKHDQSLQKPYYDAEKEAGLRPVAGNGKAQGRNMSMNTSEAVQQKDVKSTISYTDDELGSEMEPMISD--VLPPPPPPFLQTLSAERMVVNPIVPSITSGKHAMKNVNSAEFFTIASLQQYTNSFSQDNLIGGGMLGTVYRAESPK-KLLAVKKLDTAMTKRQSDQEFVEMVSNISKLQHENIVKLVGYCSEHGQRLLVYEYCRNGTLHEALHLDDQIHRKLSWSTRVRIALQAARALEYLHEVCQPPIVHLNFKSTNVLLDDELAVHMSDCGLAPLMSSDSIRQLQGSGYGAPELELGNYTCQSDVYSFGVVMLELLTGRQSYDRSRPRGEQLLVRWAIPRLHDIDALSRMVDPSLNGCYPSKSLSRFADIISLCIQPEPEFRPPMSEIVQNLLQMIXR 747    
BLAST of DCAR_004125 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1C1M1 ((Lrr receptor-linked protein kinase {ECO:0000313|EnsemblPlants:PGSC0003DMT400057768}))

HSP 1 Score: 810.446 bits (2092), Expect = 0.000e+0
Identity = 433/738 (58.67%), Postives = 526/738 (71.27%), Query Frame = 0
 
Query:   23 CQGFTDPRDVAAINNLYGALGTPPLIGWVQAGGDPCTEGWQGVQCVNANITAIALNGANLGGVLGESLGVFASIIQIDLGNNHIGGIIPSNLPTTTRILSLSGNQFTGTIPETFSTLGQLTDMSLSNNHLTGVIPDTFQQLTG----DLSGNNLEGQLPPSLGNLLSLTKLHLQDNQLTGTLDVLQDLPLIDLDVENNLFSGPVPDKLLGIPNFRRAGNPFNTTV-------------LSSPPASPPSAPPIGSPPSEQVPRIRPNEPSNPETSSSSKGENFLSKRIVWIVVAGLVIVIVVALGLCL-----------SQKDTEPKKEVAAAVPKRNEASAVPRRNE---------------VAGVSK---------------QNDVAEVARHRDEH---EIDMPVSDEYILPPPPLPPLNN-PFEKVIIRPNVPPVRSRKQSMEKLSSVRTFSIASLQQYTNSFSQENLLGGGKLGTVYRSELPDGKLLAVKKLDGAASKNQTDDDFLEFVSRVSELQHVNIVQLVGFCCEHGQRLLVYEYCGNGTVYEALHIDDEIHKNLSWNARVRLALQSARALEYLHEVCQPPIVHQNFTSANVLLDDGFAVRVSDCGLAPLISSNYVTQFQGSGYGAPELEMGNYTCQSDVYSFGVVMLELLTGRKAYDRSCPRGEQFLVRWAAPQLHDIDALSRMVDPSLKGTYPSKSLSRLADIISLCVQPEPEFRPPMSEIVEDLQHMV 698
            CQGFTDPRDV AIN+LY +LG P L GWV  G DPC + W GV CVN+N+T I LN +NLGG L E +G FASIIQIDL NNHIGG IPSNLP T + LSLSGNQ TG+IP+  S+LGQLTD+SL+NNHL GVIPD F QL      DLSGN+L GQLPPS+G L SL+ LHLQ+NQL+G LDVLQDL L DL++ENNLFSGP+P KLL IP FRRAGNPFNTT+              +  P   PS P I  PP +++      +PS  + SS+S      +K +  I +AGLV ++++ LG+CL           +QK+T+  +    ++PK   A   P+ ++               VAG  K               Q DV     + D+    E++  +SD  +LPPPP P L     E++++ P VPP+ S K +M+ ++S   F+IASLQQYTNSFSQ+NL+GGG LGTVYR+E P   LLAVKKLD A +K Q+D +F+E VS +S+LQH NIV+LVG+C EHGQRLLVYEYC NGT++EALH+DD+IH+ LSW+ RVR+ALQ+ARALEYLHEVCQPPIVH NF S NVLLDD  AV +SDCGLAPL+SS+ + Q QGSGYGAPELE+GNYTCQSDVYSFGVVMLELLTGR++YDRS PRGEQ LVRWA P+LHDIDALSRMVDPSL G YPSKSLSR ADIISLC+Q EPEFRPPMSEIV++L  M+
Sbjct:   20 CQGFTDPRDVFAINSLYTSLGYPLLPGWVPYGLDPCGDLWHGVLCVNSNVTGIVLNDSNLGGELSEGIGSFASIIQIDLSNNHIGGSIPSNLPVTLKTLSLSGNQLTGSIPDNISSLGQLTDLSLNNNHLNGVIPDAFLQLKTLINMDLSGNSLSGQLPPSVGTLSSLSTLHLQNNQLSGILDVLQDLALTDLNIENNLFSGPIPPKLLSIPTFRRAGNPFNTTIIPSPPMISPSPAPFALSPDLAPSLPYI-VPPGQEL------QPSGRQKSSNS------TKHVKLIAIAGLVSLVILGLGVCLLMSRFCKRRRETQKETKRHETYDHSLPK---AKGNPKHDQSLQKPYYDAEKGLRPVAGNGKAQGRNMSMNTSEAVQQKDVKSTISYTDDELGSEMESMISD--VLPPPPPPFLQTLSAERMVVNPIVPPITSGKHAMKNVNSAEFFTIASLQQYTNSFSQDNLIGGGMLGTVYRAESPK-TLLAVKKLDTAMTKRQSDQEFVEMVSNISKLQHENIVKLVGYCSEHGQRLLVYEYCRNGTLHEALHLDDQIHRKLSWSTRVRIALQAARALEYLHEVCQPPIVHLNFKSTNVLLDDELAVHMSDCGLAPLMSSDSIRQLQGSGYGAPELELGNYTCQSDVYSFGVVMLELLTGRQSYDRSRPRGEQLLVRWAIPRLHDIDALSRMVDPSLNGCYPSKSLSRFADIISLCIQSEPEFRPPMSEIVQNLLQMI 738    
BLAST of DCAR_004125 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A200QRW6 ((Protein kinase domain {ECO:0000313|EMBL:OVA13193.1}))

HSP 1 Score: 806.979 bits (2083), Expect = 0.000e+0
Identity = 447/768 (58.20%), Postives = 534/768 (69.53%), Query Frame = 0
 
Query:    1 MGRFNWEIFGQVLVGLM--STLVVCQGFTDPRDVAAINNLYGALGTPPLIGWVQAGGDPCTEGWQGVQCVNANITAIALNGANLGGVLGESLGVFASIIQIDLGNNHIGGIIPSNLPTTTRILSLSGNQFTGTIPETFSTLGQLTDMSLSNNHLTGVIPDTFQQLTG----DLSGNNLEGQLPPSLGNLLSLTKLHLQDNQLTGTLDVLQDLPLI-DLDVENNLFSGPVPDKLLGIPNFRRAGNPFNTTVLSSPPASPPSAPPIGSPPSEQVPRIRPNEPSNPETSSSSKGENFL-SKRIVWIVVAGLVIVIVVALGLCLS----------------------------------QKDTEPKKEVAAAVPKRNEASAVPRRNEVAGVSKQNDVAEVARHR--------DEHEIDMPVSDEYILPPPPLPPLNNPFEKVIIRPNV-------PPVRSRKQSMEKLSSVRTFSIASLQQYTNSFSQENLLGGGKLGTVYRSELPDGKLLAVKKLDGAASKNQTDDDFLEFVSRVSELQHVNIVQLVGFCCEHGQRLLVYEYCGNGTVYEALHIDDEIHKNLSWNARVRLALQSARALEYLHEVCQPPIVHQNFTSANVLLDDGFAVRVSDCGLAPLISSNYVT----QFQGSGYGAPELEMGNYTCQSDVYSFGVVMLELLTGRKAYDRSCPRGEQFLVRWAAPQLHDIDALSRMVDPSLKGTYPSKSLSRLADIISLCVQPEPEFRPPMSEIVEDLQHMVGRARTRDDI 707
            M  F+WEI+ +V +G M  ST  +  G+TDPRDV AINNLY ALG P L GWV  GGDPC E WQGV+CVN+NIT I LNGANLGG LG++L  F SII I+L NN IGG IPSNLP T R   LS NQF G+IP + S+L Q+TDMSL+NN L+G IPD FQ LT     DLS NNL GQLPPSLGNL +LT LHLQ+NQLTGTL VLQDLPL+ +L+V NNLFSGPVP+KLL IPNF+  GNPFNTTV  S  A PP  PP G+P S + P    N PS      S+K +NF  +K+++WI VA L+I+I V L +C+S                                  Q   E +K    AV +  +   +  R  +  +SKQ +  E+ R R        +EHEID+   D  ++PPPP PP+    EKV+++P V       PPV    +++   +SVR+F+IA+LQQYTNSFSQEN LG G LG+VYR+ELPDGK+LAVKKLD   S  Q DD F   VS V +L+H N+V+LVG+C EHGQRLL+Y YC NGT+++ALH DDEI+  LSWN+RVR++L +ARALEYLHEVCQPP+VH+NF SANVLLDD   VRVSDCGLAPLISS  V+    Q    GY APE EMG YT QSDVYSFGVVMLELLTGRKAYDRS PRGEQFLVRWA PQLHD DALSRMVDPSL G+YP+KSLSR ADIISLCVQ EPEFRPPMSEIV++L HM+ R   + ++
Sbjct:    1 MDYFSWEIYARVFMGFMLISTTSLSYGYTDPRDVFAINNLYAALGYPLLPGWVPNGGDPCLEAWQGVECVNSNITGIILNGANLGGQLGDNLDYFTSIITINLSNNRIGGSIPSNLPLTVRNFFLSANQFVGSIPSSLSSLSQVTDMSLNNNLLSGEIPDAFQALTSLVNLDLSVNNLSGQLPPSLGNLSALTALHLQNNQLTGTLFVLQDLPLLTELNVANNLFSGPVPEKLLTIPNFKMDGNPFNTTVAPSSSALPPPPPPSGAPASVEAPWNPANGPSASAGPVSAKTKNFWTTKKVIWIAVAALLIIIAVGLAICMSSCCKQRKKSDGISKGPGAHYKGSKEKPKDREYLVQPTNETEKVTMEAVARSKDEHGIDIR-RMGAISKQKEQPEIDRRRMDLISKRKEEHEIDILGMDMNLMPPPPPPPV----EKVMVKPKVLAEVTSRPPV---AKTLNPPTSVRSFTIAALQQYTNSFSQENFLGHGMLGSVYRAELPDGKVLAVKKLDNVTSILQNDDQFFGLVSSVDKLRHANVVELVGYCAEHGQRLLIYGYCSNGTLHDALHSDDEINNKLSWNSRVRISLGAARALEYLHEVCQPPVVHRNFKSANVLLDDEITVRVSDCGLAPLISSGSVSQLPEQLSAYGYSAPEFEMGTYTYQSDVYSFGVVMLELLTGRKAYDRSRPRGEQFLVRWAIPQLHDFDALSRMVDPSLNGSYPAKSLSRFADIISLCVQSEPEFRPPMSEIVQNLVHMIQREPHKQEV 760    
BLAST of DCAR_004125 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2U1QAB9 ((Leucine-rich repeat protein kinase family protein {ECO:0000313|EMBL:PWA94933.1}))

HSP 1 Score: 806.979 bits (2083), Expect = 0.000e+0
Identity = 419/710 (59.01%), Postives = 517/710 (72.82%), Query Frame = 0
 
Query:    1 MGRFNWEIFGQVLVGLMSTLVV--CQGFTDPRDVAAINNLYGALGTPPLIGWVQAGGDPCTEGWQGVQCVNANITAIALNGANLGGVLGESLGVFASIIQIDLGNNHIGGIIPSNLPTTTRILSLSGNQFTGTIPETFSTLGQLTDMSLSNNHLTGVIPDTFQQLTG----DLSGNNLEGQLPPSLGNLLSLTKLHLQDNQLTGTLDVLQDLPLIDLDVENNLFSGPVPDKLLGIPNFRRAGNPFNTTVLSSPPA-SP-PSAPPIGSPPSEQVPRIRPNEPSNPET-SSSSKGENFLSKRIVWIVVAGLVIVIVVALGLCLSQKDTEPKKEVAAAVPKRNEASAVPRRNEVAGVSKQNDVAEVARH----RDEHEIDMPVSDEYILPPPPLPPLNNPFEKVIIRPNVPPVRSRKQSMEKLSSVRTFSIASLQQYTNSFSQENLLGGGKLGTVYRSELPDGKLLAVKKLDGAASKNQTDDDFLEFVSRVSELQHVNIVQLVGFCCEHGQRLLVYEYCGNGTVYEALHIDDEIHKNLSWNARVRLALQSARALEYLHEVCQPPIVHQNFTSANVLLDDGFAVRVSDCGLAPLISSNYVTQFQGSGYGAPELEMGNYTCQSDVYSFGVVMLELLTGRKAYDRSCPRGEQFLVRWAAPQLHDIDALSRMVDPSLKGTYPSKSLSRLADIISLCVQPEPEFRPPMSEIVEDLQHM 697
            MG    +I+   +VGL++ +    C  FTD RD+ AIN+LY ALG PPL+GW+ AGGDPC EGWQGVQC+N+NIT I LN ANLGG L  +LG FASI QIDL NNHIGG IPSNLP T +   LSGNQ TG+IPE+ STLG LTD+SL+NNHL+G IPD+FQQL      DLS NNL G +PPS+  L S++ LHL+DNQLTG LDVLQDLPLIDLD+ENNLFSGP+P KLLGIPNFR  GNPFNTT++ SPPA SP P++     PP    P I+   PS+ E   SS + ++ +SK++VWI V G  I++++ALGLC+       K++    V    ++S +   +      K+    +  RH    R   E D  +      PPP LPP     E VI++P   P  +     + +   R FS+ASLQ YTNSFSQENL+G G LG+VY++ELP+GK++AVKKL+ A  +  +D+DF+  VS VS+LQ+ NIV L G+C EHGQRL +YEYC NGT+++ALH+D++IH+ LSWNARV LALQ+A+ALEYLHE CQP +VHQNF SAN+LLD+   VRVSDCGLA L+ S+Y +Q QG GYGAPELE G+YT QSDVYSFG+VMLELLTGRKA+DRS PRGEQ+LVRWA P+LHDIDALSRMVDPSL   Y SKS+SR ADIISLCVQ EPEFRPPMSEIV++L HM
Sbjct:    1 MGNSKLKIYMVAVVGLLAVISTQSCFAFTDSRDILAINSLYAALGFPPLVGWLLAGGDPCLEGWQGVQCLNSNITGIVLNDANLGGELVVNLGTFASITQIDLSNNHIGGSIPSNLPVTLKTFFLSGNQLTGSIPESLSTLGLLTDLSLNNNHLSGAIPDSFQQLLALANLDLSANNLSGPMPPSMARLSSISTLHLEDNQLTGVLDVLQDLPLIDLDIENNLFSGPIPPKLLGIPNFRSKGNPFNTTIIPSPPAESPLPASTSEAQPPGIN-PVIQARGPSSSELPHSSGQQKSNMSKKVVWIAVGGFFILVLLALGLCVRMSKWY-KEKSTVKVGDHMKSSILNLSSSNPSHPKETQRIDSGRHNSLPRSNLEEDQKIQTISKNPPPTLPPQPLAGEGVIVKPVAIPTTTVGDISKNIHFPRFFSVASLQHYTNSFSQENLIGNGMLGSVYKAELPNGKVVAVKKLENATLRQWSDEDFIGLVSNVSKLQNDNIVGLEGYCLEHGQRLFIYEYCKNGTLHDALHLDEKIHEKLSWNARVHLALQAAKALEYLHEFCQPLVVHQNFKSANILLDEELNVRVSDCGLASLLPSSYTSQLQGLGYGAPELESGSYTYQSDVYSFGIVMLELLTGRKAFDRSKPRGEQYLVRWAVPRLHDIDALSRMVDPSLDSAYSSKSISRFADIISLCVQAEPEFRPPMSEIVQNLLHM 708    
BLAST of DCAR_004125 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7XSF0 ((protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform X3 {ECO:0000313|RefSeq:XP_009789819.1}))

HSP 1 Score: 805.823 bits (2080), Expect = 0.000e+0
Identity = 427/724 (58.98%), Postives = 529/724 (73.07%), Query Frame = 0
 
Query:   23 CQGFTDPRDVAAINNLYGALGTPPLIGWVQAGGDPCTEGWQGVQCVNANITAIALNGANLGGVLGESLGVFASIIQIDLGNNHIGGIIPSNLPTTTRILSLSGNQFTGTIPETFSTLGQLTDMSLSNNHLTGVIPDTFQQLTG----DLSGNNLEGQLPPSLGNLLSLTKLHLQDNQLTGTLDVLQDLPLIDLDVENNLFSGPVPDKLLGIPNFRRAGNPFNTTVLSSPPASPPS-------APPIGSPPSEQVPRIRPNEPSNPETSSSSKGENFLSKRIVWIVVAGLVIVIVVALGLCL-----------SQKDTEPKKEVAAA--VPKRNEASAVPRRNEVAGV-------SKQNDVA----EVARHRD------------EHEIDMPVSDEYILPPPPLPPLNN-PFEKVIIRPNVPPVRSRKQSMEKLSSVRTFSIASLQQYTNSFSQENLLGGGKLGTVYRSELPDGKLLAVKKLDGAASKNQTDDDFLEFVSRVSELQHVNIVQLVGFCCEHGQRLLVYEYCGNGTVYEALHIDDEIHKNLSWNARVRLALQSARALEYLHEVCQPPIVHQNFTSANVLLDDGFAVRVSDCGLAPLISSNYVTQFQGSGYGAPELEMGNYTCQSDVYSFGVVMLELLTGRKAYDRSCPRGEQFLVRWAAPQLHDIDALSRMVDPSLKGTYPSKSLSRLADIISLCVQPEPEFRPPMSEIVEDLQHMV 698
            C+GFTDPRDV AIN+LY +LG P L GWV  G DPC + W GV CVN+N+TAI LN +NLGG L E +G FASIIQI+L NNHIGG IPSNLP T + LSLSGNQ TG+IP+T S+LGQL+D+SL+NNHL GVIPD FQQL      DLSGN+L GQLPPS+GNL SL  LHLQ+NQL+G LDVLQDL L DL++ENNLFSGP+P KLL IP FRRAGNPFNTT++ SPP   PS       +P +       VP  +  + S  + SS+S      +K +  I +AGL+ ++++ LG+CL           SQK+T+     +++   PK + +   P  +   G+         Q +++    E  +H+             + E++  VSD  ILPPPP P L+    E++++ P +PP+ S + +M+ ++S   F+IASLQQYTNSFSQ+NL+GGG LGTVYR+E P  KLLAVKKLD A ++ Q+D +F+  VS +S L+H NIV+LVG+C EHGQRLLVYEYC  GT++EALH+DDEIH+ LSW+ RVR+A Q+ARALEYLHEVC PPIVHQNF SANVLLDD  AV +SDCGLAPL+SS+  TQ QG GYGAPELE+G+Y+CQSDVYSFGVVMLELLTGRK+YDRS PRGEQ LVRWA P+LHDIDALSRMVDPSL G+YPSKSLSR ADIISLC+Q EPEFRPPMSEIV++L HM+
Sbjct:   21 CKGFTDPRDVFAINSLYTSLGYPLLPGWVPYGLDPCGDKWHGVLCVNSNVTAIVLNDSNLGGELSEGIGSFASIIQINLSNNHIGGSIPSNLPVTVKTLSLSGNQLTGSIPDTISSLGQLSDLSLNNNHLNGVIPDAFQQLKSLINMDLSGNSLSGQLPPSMGNLPSLITLHLQNNQLSGILDVLQDLALTDLNIENNLFSGPIPSKLLSIPTFRRAGNPFNTTIIPSPPVISPSPAPFAVLSPDVAPSQPFTVPSGQGLQHSGGQKSSNS------TKHVKVIAIAGLLTLVILGLGVCLLMSRFLKRRRESQKETKRHHAYSSSKGSPKHDHSVQKPYYDAEKGLRPVTGNRKAQGNISMNTSEAVQHKGMKSTTSYTDDDLDSEMESTVSD--ILPPPPPPFLSALSAERMVVNPILPPITSVRHAMKNVNSAEFFTIASLQQYTNSFSQDNLIGGGMLGTVYRAESPK-KLLAVKKLDTAVTRRQSDQEFVGMVSNISGLKHENIVKLVGYCSEHGQRLLVYEYCRYGTLHEALHLDDEIHRKLSWSTRVRIAHQAARALEYLHEVCHPPIVHQNFKSANVLLDDELAVHISDCGLAPLMSSDSTTQLQGCGYGAPELELGSYSCQSDVYSFGVVMLELLTGRKSYDRSRPRGEQLLVRWAIPRLHDIDALSRMVDPSLNGSYPSKSLSRFADIISLCIQSEPEFRPPMSEIVQNLLHMI 735    
Match NameStatsDescription
A0A5B7BSE8E-Value: 0.000e+0, PID: 63.36Protein kinase domain-containing protein {ECO:0000... [more]
A0A1U8BED2E-Value: 0.000e+0, PID: 58.32(protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X2 {... [more]
A0A1U8BAQ5E-Value: 0.000e+0, PID: 57.99(protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 {... [more]
A0A1S3X979E-Value: 0.000e+0, PID: 59.59(protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform... [more]
A0A2G9HR28E-Value: 0.000e+0, PID: 59.23(Serine/threonine protein kinase {ECO:0000313|EMBL... [more]
A0A0V0IUP6E-Value: 0.000e+0, PID: 58.76Protein kinase domain-containing protein {ECO:0000... [more]
M1C1M1E-Value: 0.000e+0, PID: 58.67(Lrr receptor-linked protein kinase {ECO:0000313|E... [more]
A0A200QRW6E-Value: 0.000e+0, PID: 58.20(Protein kinase domain {ECO:0000313|EMBL:OVA13193.... [more]
A0A2U1QAB9E-Value: 0.000e+0, PID: 59.01(Leucine-rich repeat protein kinase family protein... [more]
A0A1U7XSF0E-Value: 0.000e+0, PID: 58.98(protein STRUBBELIG-RECEPTOR FAMILY 3-like isoform... [more]

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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions.

For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins.

Data from this analysis can be viewed in JBrowse here.

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