Resource Type:
Polypeptide
Name:
DCAR_011063
Identifier:
DCAR_011063.mRNA-protein
Sequence:
MASSKPQRSPAEIEDIILRKIFLVSLLDSMESDSRVVYLEMTAAEILSEG
KDLRLSRDLMERVLIDRLSGNFVAAEPPFTYLLGCYRRAYDEGKKVLSMK
DKNLSADMVAVIKQARKLAVSYCRIHLGNPDMFPNWDNANGSNKSSVSQL
LPLIFSEVSSSVDGFGGSGSAAGVSCPPGFLDEFIKESDFDSVDPILKQL
YEDLRGSVLTVSALGNFQQPLRALLYLVNTPSGAKSLVSHRWWIPKGAYL
NGRVIEMTSILGPFFHVSALPDQTIFRSQPDVGQQCFAEASTRRPADLLS
SFSTIRSVMNNLYDGLSEVLMCLLKNTNTRENVLQYLAEVINKNKSRAHI
QVDPISCASSGMFVNLSAVMLRLCEPFLDANLSKRDKIDPQYVFSSSRLD
LSELTALHASSEEVTEWFTKNNPGKVDVSDANSDGENRLLQSQEASSSGS
NLGGSAKYSFICECFFMTARVLNLGLIKGFSDFKHLVQDIQRSEDSLASL
KAMQEQAPSPQLNQNIARLEKELELYSQEKLCYEAQILRDGGFIQQALSF
YRLMVVWLVRLVGGFKMPLPSTCPREFASMPEHFVEDVMEFLIFASRIPK
ALDGAILDDFMNFIIMFMGSPEYVRNPYLRAKMVEVLNCWMPRRSGSSAT
STLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEY
LWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKE
LEAEMSNTVEWERRPSQERQERTRLFHSQENIIRIDMKLANEDVTMLAFT
SEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKH
LLKQIVNIYVHLARGDKHNIFPSAITKDGRSYNEQLFSAAASVLQRIGED
MRVIQEFVELGNKAKVAASEAKDAEAALGEIPDEFLDPIQYTLMQDPVIL
PSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPDIELKAQIDEFLRS
RELKRHGDNLSMQSSKATIQTTDDTPLIE*
Sequence Length:
1030
Sequence Checksum:
735d1e742e3ef8fbe723e6174d404fc2
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_011063, derives from mRNA, DCAR_011063. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_011063 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_011063 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AKB7 ((Putative ubiquitin conjugation factor E4 {ECO:0000313|EMBL:MPA55543.1}) (2.3.2.27 {ECO:0000313|EMBL:MPA55543.1}))
HSP 1 Score: 1808.5 bits (4683), Expect = 0.000e+0
Identity = 870/1039 (83.73%), Postives = 949/1039 (91.34%), Query Frame = 0
Match: A0A5B7AKB7 ((Putative ubiquitin conjugation factor E4 {ECO:0000313|EMBL:MPA55543.1}) (2.3.2.27 {ECO:0000313|EMBL:MPA55543.1}))
HSP 1 Score: 1808.5 bits (4683), Expect = 0.000e+0
Identity = 870/1039 (83.73%), Postives = 949/1039 (91.34%), Query Frame = 0
Query: 1 MASSKPQRSPAEIEDIILRKIFLVSLLDSMESDSRVVYLEMTAAEILSEGKDLRLSRDLMERVLIDRLSGNFVAAEPPFTYLLGCYRRAYDEGKKVLSMKDKNLSADMVAVIKQARKLAVSYCRIHLGNPDMFPNWDNANGSNKSSVSQLLPLIFSEVSSSVDGFGGSGSAAGVSCPPGFLDEFIKESDFDSVDPILKQLYEDLRGSVLTVSALGNFQQPLRALLYLVNTPSGAKSLVSHRWWIPKGAYLNGRVIEMTSILGPFFHVSALPDQTIFRSQPDVGQQCFAEASTRRPADLLSSFSTIRSVMNNLYDGLSEVLMCLLKNTNTRENVLQYLAEVINKNKSRAHIQVDPISCASSGMFVNLSAVMLRLCEPFLDANLSKRDKIDPQYVFSSSRLDLSELTALHASSEEVTEWFTKNNPGKVDVSDANSDGENRLLQSQEASSSGSNLGG---------------SAKYSFICECFFMTARVLNLGLIKGFSDFKHLVQDIQRSEDSLASLKAMQEQAPSPQLNQNIARLEKELELYSQEKLCYEAQILRDGGFIQQALSFYRLMVVWLVRLVGGFKMPLPSTCPREFASMPEHFVEDVMEFLIFASRIPKALDGAILDDFMNFIIMFMGSPEYVRNPYLRAKMVEVLNCWMPRRSGSSATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPSQERQERTRLFHSQENIIRIDMKLANEDVTMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKHNIFPSAITKDGRSYNEQLFSAAASVLQRIGEDMRVIQEFVELGNKAKVAASEAKDAEAALGEIPDEFLDPIQYTLMQDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPDIELKAQIDEFLRSRELKRHGDNLSMQSSKATIQTTDD 1024
MA+ KPQRSPAEIEDIILRKIFLVSL+DSME+DSR+VY EMTAAEILSEGK+LRLSRDLMERVLIDRLS F +AEPPF YL+GCYRRAYDEGKK+ SMKDK + +++ +V+KQA+KLAVSYCRIHLGNPDMFPNWD ++KS+V LLPLIFSEVSSSVDGFGGSGS A + CPPGFL+EF ++SDFDS+DPILKQLYEDLRGSVL VSALGNFQQPLRALL+LV+ P GAKSLV+H WWIPKGAYLNGRVIEMTSILGPFFHVSALPD TIF+S+PDVGQQCF+EASTRRPADLLSSF+TI++VMNNLYDGLSEVL+CLLKNT+TRENVL+YLAEVINKN SRAHIQVDPISCASSGMFVNLSAVMLRLCEPFLDANL+KRDKIDP+YVF S+RLDL LTALHASSEEV EW K++PG+ D S SDGENRLLQSQEA+SSG+ GG AKY FICECFFMTARVLNLGL+K FSDFKHLVQDI R ED+L++LKAMQ QAP+PQL +IARL+KE+ELYSQEKLCYEAQILRDGG +Q ALSFYRLMVVWLV LVGGFKMPLP TCP EFA MPEHFVED ME LIFASRIPKALDG ILDDFMNFIIMFM SP+++RNPYLRAKMVEVLNCWMPRRSGSS T+TLFEGHQLSLEYLV+NLLK+YVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFL+NDSIYLLDESLNKILELKELEAEMSNTVEWERR +QERQERTRLFHSQENIIRIDMKLANEDVTMLAFTSEQI APFLLPEMVERVASMLNYFLLQLVGPQRKSL+LK+PEKYEFRPK LLKQIVNIYV+LARGDK NIFP+AITKDGRSYNEQLFSAAA VL+RIGED R+IQEF+ LG KAKVAASEA DAEAALGEIPDEFLDPIQYTLM+DPVILPSSRITVDRPVIQRHLLSD +DPFNRSHLT D+LIP+ ELKA+I+EF+RS++LK+ G+ LSMQS+K IQTT D
Sbjct: 1 MATQKPQRSPAEIEDIILRKIFLVSLIDSMENDSRIVYFEMTAAEILSEGKELRLSRDLMERVLIDRLSDQFPSAEPPFPYLIGCYRRAYDEGKKISSMKDKAVKSELESVVKQAKKLAVSYCRIHLGNPDMFPNWD----TSKSNVLPLLPLIFSEVSSSVDGFGGSGSGA-IGCPPGFLEEFFRDSDFDSLDPILKQLYEDLRGSVLKVSALGNFQQPLRALLFLVSFPIGAKSLVNHPWWIPKGAYLNGRVIEMTSILGPFFHVSALPDHTIFKSEPDVGQQCFSEASTRRPADLLSSFTTIKTVMNNLYDGLSEVLLCLLKNTDTRENVLEYLAEVINKNLSRAHIQVDPISCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPKYVFYSTRLDLRGLTALHASSEEVAEWLNKDHPGRADGSRQYSDGENRLLQSQEATSSGNYAGGPSPLQSNKPMSSCSEKAKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLSTLKAMQGQAPAPQLELDIARLDKEIELYSQEKLCYEAQILRDGGLLQHALSFYRLMVVWLVGLVGGFKMPLPLTCPMEFACMPEHFVEDAMELLIFASRIPKALDGVILDDFMNFIIMFMASPDFIRNPYLRAKMVEVLNCWMPRRSGSSVTTTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLVNDSIYLLDESLNKILELKELEAEMSNTVEWERRSAQERQERTRLFHSQENIIRIDMKLANEDVTMLAFTSEQIIAPFLLPEMVERVASMLNYFLLQLVGPQRKSLTLKEPEKYEFRPKQLLKQIVNIYVNLARGDKENIFPAAITKDGRSYNEQLFSAAADVLRRIGEDGRIIQEFIGLGAKAKVAASEAMDAEAALGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDNSDPFNRSHLTPDLLIPNTELKAKIEEFIRSQQLKKRGEGLSMQSAKDKIQTTTD 1034
BLAST of DCAR_011063 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A314L8F4 ((Putative ubiquitin conjugation factor e4 {ECO:0000313|EMBL:OIT37848.1}))
HSP 1 Score: 1805.8 bits (4676), Expect = 0.000e+0
Identity = 872/1044 (83.52%), Postives = 957/1044 (91.67%), Query Frame = 0
Match: A0A314L8F4 ((Putative ubiquitin conjugation factor e4 {ECO:0000313|EMBL:OIT37848.1}))
HSP 1 Score: 1805.8 bits (4676), Expect = 0.000e+0
Identity = 872/1044 (83.52%), Postives = 957/1044 (91.67%), Query Frame = 0
Query: 1 MASSKPQRSPAEIEDIILRKIFLVSLLDSMESDSRVVYLEMTAAEILSEGKDLRLSRDLMERVLIDRLSGNFVAAEPPFTYLLGCYRRAYDEGKKVLSMKDKNLSADMVAVIKQARKLAVSYCRIHLGNPDMFPNWDNANGSNKSSVSQLLPLIFSEVSSSVDGFGGSGSAAGVSCPPGFLDEFIKESDFDSVDPILKQLYEDLRGSVLTVSALGNFQQPLRALLYLVNTPSGAKSLVSHRWWIPKGAYLNGRVIEMTSILGPFFHVSALPDQTIFRSQPDVGQQCFAEASTRRPADLLSSFSTIRSVMNNLYDGLSEVLMCLLKNTNTRENVLQYLAEVINKNKSRAHIQVDPISCASSGMFVNLSAVMLRLCEPFLDANLSKRDKIDPQYVFSSSRLDLSELTALHASSEEVTEWFTKNNPGKVDVSDANSDGENRLLQSQEASSSGSNLGG---------------SAKYSFICECFFMTARVLNLGLIKGFSDFKHLVQDIQRSEDSLASLKAMQEQAPSPQLNQNIARLEKELELYSQEKLCYEAQILRDGGFIQQALSFYRLMVVWLVRLVGGFKMPLPSTCPREFASMPEHFVEDVMEFLIFASRIPKALDGAILDDFMNFIIMFMGSPEYVRNPYLRAKMVEVLNCWMPRRSGSSATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPSQERQERTRLFHSQENIIRIDMKLANEDVTMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKHNIFPSAITKDGRSYNEQLFSAAASVLQRIGEDMRVIQEFVELGNKAKVAASEAKDAEAALGEIPDEFLDPIQYTLMQDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPDIELKAQIDEFLRSRELKRHGDNLSMQSSKATIQTTDDTPLIE 1029
MA++KPQR+PAEIEDIILRKI LV+L+DSME+D+RVVYLEMTAAEILSEGK+LRLSRDLMERVLIDRLSGNFV+AEPPF YL+ C+RRA++EGKK+ SMKDKN+ ++M V+KQ +KLAVSYCRIHLGNPDMFPNWD A KSSVS LLPL+FSEVSSSVD FGG G + GV+CPPGFLDE KE DFDS+DPILKQLYEDLRG+VL VSALGNFQQPLRALLYLV P GAKSLV+H WWIPK YLNGRVIEMTSILGPFFHVSALPD TIF+SQPDVGQQCF+E++TRRPADLLSSF+TI++VMNNLYDGL+EVLM LLKNT RENVL+YLA VINKN SRAH+QVDP+SCASSGMFVNLSAVMLRLCEPFLDANL+KRDKIDPQYVFSS+RL+L LTALHASSEEV+EW +NNPGKVDVS SDGENRLL SQEA+SSG++ GG AKY FICECFFMTARVLNLGL+K FSDFKHLVQDI RSED L+++K M EQAPSPQL Q I+RLEKELELYSQEKLCYEAQILRDGG +Q+ALSFYRLMV+WLV LVGGFKMPLPS CP +FASMPEHFVED ME LIFASRIP+ALDG +LDDFMNFIIMFM SPEY+RNPYLRAKMVEVLNCWMPRRSGS+ATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNT EWERRP+QERQERTRLFHSQENIIRIDMKLANEDV++LAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPK LLKQIV IYVHLARGDK NIFP+AIT+DGRSY++Q+FSAAA VL+RIGEDMR+IQEF++LG KAKVAASEA DAEAALG+IPDEFLDPIQYTLM+DPVILPSSRITVDRPVIQRHLLSD++DPFNRSHLTADMLIPD ELKA+I+EF+RS EL++HG++L++Q++K TIQTTD + LIE
Sbjct: 1 MATTKPQRTPAEIEDIILRKILLVTLVDSMENDTRVVYLEMTAAEILSEGKELRLSRDLMERVLIDRLSGNFVSAEPPFQYLINCFRRAHEEGKKIASMKDKNVRSEMELVVKQVKKLAVSYCRIHLGNPDMFPNWDTA----KSSVSPLLPLVFSEVSSSVDAFGGGGGSGGVTCPPGFLDELFKEGDFDSMDPILKQLYEDLRGTVLKVSALGNFQQPLRALLYLVKYPVGAKSLVNHPWWIPKSVYLNGRVIEMTSILGPFFHVSALPDNTIFKSQPDVGQQCFSESATRRPADLLSSFTTIKTVMNNLYDGLAEVLMSLLKNTAIRENVLEYLAAVINKNSSRAHLQVDPLSCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPQYVFSSTRLELRGLTALHASSEEVSEWINQNNPGKVDVSKEGSDGENRLLASQEATSSGNDSGGPSILHNSRPISSSSEKAKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRSEDHLSTMKTMLEQAPSPQLQQEISRLEKELELYSQEKLCYEAQILRDGGLLQRALSFYRLMVIWLVGLVGGFKMPLPSPCPMQFASMPEHFVEDTMELLIFASRIPRALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSTATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSLLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKELLKQIVKIYVHLARGDKENIFPAAITRDGRSYSDQIFSAAADVLRRIGEDMRIIQEFIDLGAKAKVAASEAMDAEAALGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSSDPFNRSHLTADMLIPDTELKAKIEEFIRSHELQKHGEDLNLQNTKTTIQTTDTSNLIE 1040
BLAST of DCAR_011063 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3YMJ6 ((probable ubiquitin conjugation factor E4 {ECO:0000313|RefSeq:XP_016453506.1}))
HSP 1 Score: 1800.79 bits (4663), Expect = 0.000e+0
Identity = 869/1044 (83.24%), Postives = 956/1044 (91.57%), Query Frame = 0
Match: A0A1S3YMJ6 ((probable ubiquitin conjugation factor E4 {ECO:0000313|RefSeq:XP_016453506.1}))
HSP 1 Score: 1800.79 bits (4663), Expect = 0.000e+0
Identity = 869/1044 (83.24%), Postives = 956/1044 (91.57%), Query Frame = 0
Query: 1 MASSKPQRSPAEIEDIILRKIFLVSLLDSMESDSRVVYLEMTAAEILSEGKDLRLSRDLMERVLIDRLSGNFVAAEPPFTYLLGCYRRAYDEGKKVLSMKDKNLSADMVAVIKQARKLAVSYCRIHLGNPDMFPNWDNANGSNKSSVSQLLPLIFSEVSSSVDGFGGSGSAAGVSCPPGFLDEFIKESDFDSVDPILKQLYEDLRGSVLTVSALGNFQQPLRALLYLVNTPSGAKSLVSHRWWIPKGAYLNGRVIEMTSILGPFFHVSALPDQTIFRSQPDVGQQCFAEASTRRPADLLSSFSTIRSVMNNLYDGLSEVLMCLLKNTNTRENVLQYLAEVINKNKSRAHIQVDPISCASSGMFVNLSAVMLRLCEPFLDANLSKRDKIDPQYVFSSSRLDLSELTALHASSEEVTEWFTKNNPGKVDVSDANSDGENRLLQSQEASSSGSNLGG---------------SAKYSFICECFFMTARVLNLGLIKGFSDFKHLVQDIQRSEDSLASLKAMQEQAPSPQLNQNIARLEKELELYSQEKLCYEAQILRDGGFIQQALSFYRLMVVWLVRLVGGFKMPLPSTCPREFASMPEHFVEDVMEFLIFASRIPKALDGAILDDFMNFIIMFMGSPEYVRNPYLRAKMVEVLNCWMPRRSGSSATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPSQERQERTRLFHSQENIIRIDMKLANEDVTMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKHNIFPSAITKDGRSYNEQLFSAAASVLQRIGEDMRVIQEFVELGNKAKVAASEAKDAEAALGEIPDEFLDPIQYTLMQDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPDIELKAQIDEFLRSRELKRHGDNLSMQSSKATIQTTDDTPLIE 1029
MA++KPQR+P EIEDIILRKI LV+L+DSME+D+RVVYLEMTAAEILSEGK+LRLSRDLMERVLIDRLSGNFV+AEPPF YL+ C+RRA++EGKK++SMKDKN+ ++M V+KQ +KLAVSYCRIHLGNPDMFPNWD A KS+VS LLPL+FSEVSSSVD FGG G + G++CPPGFLDE KE DFDS+DPILKQLYEDLRG+VL VSALGNFQQPLRALLYLV P GAKSLV+H WWIPK YLNGRVIEMTSILGPFFHVSALPD TIF+SQPDVGQQCF+E++TRRPADLLSSF+TI++VMNNLYDGL+EVLM LLKNT RENVL+YLA VINKN SRAH+QVDP+SCASSGMFVNLSAVMLRLCEPFLDANL+KRDKIDPQYVFSS+RL+L LTALHASSEEV+EW +NNPGKVDVS SDGENRLL SQEA+SSG++ GG AKY FICECFFMTARVLNLGL+K FSDFKHLVQDI RSED L+++K M EQAPSPQL Q ++RLEKELELYSQEKLCYEAQILRDGG +Q+ALSFYRLMVVWLV LVGGFKMPLPS CP EFASMPEHFVED ME LIFASRIP+ALDG +LDDFMNFIIMFM SPEY+RNPYLRAKMVEVLNCWMPRRSGS+ATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNT EWERRP+QERQERTRLFHSQENIIRIDMKLANEDV++LAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPK LLKQIV IYVHLARGDK NIFP+AIT+DGRSY++Q+FSAAA VL+RIGEDMR+IQEF++LG KAKVAASEA DAEAALG+IPDEFLDPIQYTLM+DPVILPSSRITVDRPVIQRHLLSD++DPFNRSHLTADMLIPD ELKA+I+EF+RS EL++ G++L++Q++K TIQTTD + LIE
Sbjct: 1 MATTKPQRTPVEIEDIILRKILLVTLVDSMENDTRVVYLEMTAAEILSEGKELRLSRDLMERVLIDRLSGNFVSAEPPFQYLINCFRRAHEEGKKIVSMKDKNVRSEMELVVKQVKKLAVSYCRIHLGNPDMFPNWDTA----KSNVSPLLPLVFSEVSSSVDAFGGGGGSGGMTCPPGFLDELFKEGDFDSMDPILKQLYEDLRGTVLKVSALGNFQQPLRALLYLVKYPVGAKSLVNHPWWIPKSVYLNGRVIEMTSILGPFFHVSALPDNTIFKSQPDVGQQCFSESATRRPADLLSSFTTIKTVMNNLYDGLAEVLMSLLKNTVIRENVLEYLAAVINKNSSRAHLQVDPLSCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPQYVFSSTRLELRGLTALHASSEEVSEWINQNNPGKVDVSKEGSDGENRLLASQEATSSGNDSGGPSSLHNSRPTSSSSEKAKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRSEDHLSTMKTMLEQAPSPQLQQELSRLEKELELYSQEKLCYEAQILRDGGLLQRALSFYRLMVVWLVGLVGGFKMPLPSPCPMEFASMPEHFVEDAMELLIFASRIPRALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSTATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSLLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKELLKQIVKIYVHLARGDKENIFPAAITRDGRSYSDQIFSAAADVLRRIGEDMRIIQEFIDLGAKAKVAASEAMDAEAALGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSSDPFNRSHLTADMLIPDTELKAKIEEFIRSHELQKRGEDLNLQNTKTTIQTTDTSNLIE 1040
BLAST of DCAR_011063 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4DB64 ((probable ubiquitin conjugation factor E4 {ECO:0000313|RefSeq:XP_016510685.1}))
HSP 1 Score: 1787.31 bits (4628), Expect = 0.000e+0
Identity = 867/1044 (83.05%), Postives = 951/1044 (91.09%), Query Frame = 0
Match: A0A1S4DB64 ((probable ubiquitin conjugation factor E4 {ECO:0000313|RefSeq:XP_016510685.1}))
HSP 1 Score: 1787.31 bits (4628), Expect = 0.000e+0
Identity = 867/1044 (83.05%), Postives = 951/1044 (91.09%), Query Frame = 0
Query: 1 MASSKPQRSPAEIEDIILRKIFLVSLLDSMESDSRVVYLEMTAAEILSEGKDLRLSRDLMERVLIDRLSGNFVAAEPPFTYLLGCYRRAYDEGKKVLSMKDKNLSADMVAVIKQARKLAVSYCRIHLGNPDMFPNWDNANGSNKSSVSQLLPLIFSEVSSSVDGFGGSGSAAGVSCPPGFLDEFIKESDFDSVDPILKQLYEDLRGSVLTVSALGNFQQPLRALLYLVNTPSGAKSLVSHRWWIPKGAYLNGRVIEMTSILGPFFHVSALPDQTIFRSQPDVGQQCFAEASTRRPADLLSSFSTIRSVMNNLYDGLSEVLMCLLKNTNTRENVLQYLAEVINKNKSRAHIQVDPISCASSGMFVNLSAVMLRLCEPFLDANLSKRDKIDPQYVFSSSRLDLSELTALHASSEEVTEWFTKNNPGKVDVSDANSDGENRLLQSQEASSSGSNLGG---------------SAKYSFICECFFMTARVLNLGLIKGFSDFKHLVQDIQRSEDSLASLKAMQEQAPSPQLNQNIARLEKELELYSQEKLCYEAQILRDGGFIQQALSFYRLMVVWLVRLVGGFKMPLPSTCPREFASMPEHFVEDVMEFLIFASRIPKALDGAILDDFMNFIIMFMGSPEYVRNPYLRAKMVEVLNCWMPRRSGSSATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPSQERQERTRLFHSQENIIRIDMKLANEDVTMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKHNIFPSAITKDGRSYNEQLFSAAASVLQRIGEDMRVIQEFVELGNKAKVAASEAKDAEAALGEIPDEFLDPIQYTLMQDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPDIELKAQIDEFLRSRELKRHGDNLSMQSSKATIQTTDDTPLIE 1029
MA++KPQR+PAEIEDIILRKI LV+L+DSME+D+RVVYLEMTAAEILSEGK+LRLSRDLMERVLIDRLSGNFV+AEPPF YL+ C+RRA++EGKK+ SMKDKN+ ++M V+KQ +KLAVSYCRIHLGNPDMFPNWD A K SVS LLPL+FSEVSSSVD FGG G + GV+CPPGFLDE KE DFDS+DPILKQLYEDLRG+VL VSALGNFQQPLRALLYLV P GAKSLV+H WWIPK YLNGRVIEMTSILGPFFHVSALPD TIF+SQPDVGQQCF+E++TRRPADLLSSF+TI++VMNNLYDGL EVLM LLKNT RENVL+YLA VINKN SRAH+QVD +SCASSGMFVNLSAVMLRLCEPFLDANL+KRDKIDPQYVFSS+RL+L LTALHASSEEV+EW +NNP DVS SDGENRLL SQEA+SSG++ GG AKY FICECFFMTARVLNLGL+K FSDFKHLVQDI RSED L+++K M EQAPSPQL Q I+RLEKELELYSQEKLCYEAQILRDGG +Q+ALSFYRLMV+WLV LVGGFKMPLPS CP EFASMPEHFVED ME LIFASRIP+ALDG +LDDFMNFIIMFM SPEY+RNPYLRAKMVEVLNCWMPRRSGS+ATSTLFEGHQLSLEYLV+NLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNT EWERRP+QERQERTRLFHSQENIIRIDMKLANEDV++LAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPK LLKQIV IYVHLARGDK NIFP+AIT+DGRSY++Q+FSAAA VL+RIGEDMR+IQEF++LG KAKVAASEA DAEAALG+IPDEFLDPIQYTLM+DPVILPSSRITVDRPVIQRHLLSD++DPFNRSHLTADMLIPD ELKA+I+EF+RS EL++HG++L++Q++K TIQTTD + LIE
Sbjct: 1 MATTKPQRTPAEIEDIILRKILLVTLVDSMENDTRVVYLEMTAAEILSEGKELRLSRDLMERVLIDRLSGNFVSAEPPFQYLINCFRRAHEEGKKIASMKDKNVRSEMELVVKQVKKLAVSYCRIHLGNPDMFPNWDTA----KLSVSPLLPLVFSEVSSSVDAFGGGGGSGGVTCPPGFLDELFKEGDFDSMDPILKQLYEDLRGTVLKVSALGNFQQPLRALLYLVKYPVGAKSLVNHPWWIPKSVYLNGRVIEMTSILGPFFHVSALPDNTIFKSQPDVGQQCFSESATRRPADLLSSFTTIKTVMNNLYDGLGEVLMSLLKNTAIRENVLEYLAAVINKNSSRAHLQVDALSCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPQYVFSSTRLELRGLTALHASSEEVSEWINQNNPEN-DVSKEGSDGENRLLVSQEATSSGNDSGGPSILHNSRPISSSSEKAKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRSEDHLSTMKTMLEQAPSPQLQQEISRLEKELELYSQEKLCYEAQILRDGGLLQRALSFYRLMVIWLVGLVGGFKMPLPSPCPMEFASMPEHFVEDAMELLIFASRIPRALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSTATSTLFEGHQLSLEYLVRNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSLLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKELLKQIVKIYVHLARGDKENIFPAAITRDGRSYSDQIFSAAADVLRRIGEDMRIIQEFIDLGAKAKVAASEAMDAEAALGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSSDPFNRSHLTADMLIPDTELKAKIEEFIRSHELQKHGEDLNLQNTKTTIQTTDTSNLIE 1039
BLAST of DCAR_011063 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G3D9U6 ((Putative ubiquitin conjugation factor E4 {ECO:0000313|EMBL:PHU27744.1}))
HSP 1 Score: 1776.53 bits (4600), Expect = 0.000e+0
Identity = 859/1044 (82.28%), Postives = 943/1044 (90.33%), Query Frame = 0
Match: A0A2G3D9U6 ((Putative ubiquitin conjugation factor E4 {ECO:0000313|EMBL:PHU27744.1}))
HSP 1 Score: 1776.53 bits (4600), Expect = 0.000e+0
Identity = 859/1044 (82.28%), Postives = 943/1044 (90.33%), Query Frame = 0
Query: 1 MASSKPQRSPAEIEDIILRKIFLVSLLDSMESDSRVVYLEMTAAEILSEGKDLRLSRDLMERVLIDRLSGNFVAAEPPFTYLLGCYRRAYDEGKKVLSMKDKNLSADMVAVIKQARKLAVSYCRIHLGNPDMFPNWDNANGSNKSSVSQLLPLIFSEVSSSVDGFGGSGSAAGVSCPPGFLDEFIKESDFDSVDPILKQLYEDLRGSVLTVSALGNFQQPLRALLYLVNTPSGAKSLVSHRWWIPKGAYLNGRVIEMTSILGPFFHVSALPDQTIFRSQPDVGQQCFAEASTRRPADLLSSFSTIRSVMNNLYDGLSEVLMCLLKNTNTRENVLQYLAEVINKNKSRAHIQVDPISCASSGMFVNLSAVMLRLCEPFLDANLSKRDKIDPQYVFSSSRLDLSELTALHASSEEVTEWFTKNNPGKVDVSDANSDGENRLLQSQEASSSG---------------SNLGGSAKYSFICECFFMTARVLNLGLIKGFSDFKHLVQDIQRSEDSLASLKAMQEQAPSPQLNQNIARLEKELELYSQEKLCYEAQILRDGGFIQQALSFYRLMVVWLVRLVGGFKMPLPSTCPREFASMPEHFVEDVMEFLIFASRIPKALDGAILDDFMNFIIMFMGSPEYVRNPYLRAKMVEVLNCWMPRRSGSSATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPSQERQERTRLFHSQENIIRIDMKLANEDVTMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKHNIFPSAITKDGRSYNEQLFSAAASVLQRIGEDMRVIQEFVELGNKAKVAASEAKDAEAALGEIPDEFLDPIQYTLMQDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPDIELKAQIDEFLRSRELKRHGDNLSMQSSKATIQTTDDTPLIE 1029
MA+SKPQR+PAEIEDIILRKI LVSL+DSMESD+R+VYLEMTAAEILSEGK+LRLSRDLMERV+IDRLSGN+V+AEPPF YL+ CYRRA++EGKK+ SMKDKN+ ++M +KQA+KLAVSYCRIHLGNP MFPNW+ N SSVS LLPL+FSEVSSSVD FGG GS+ GV+ PPGFLDE K+ DFDS+DPILKQLYEDLRG+VL VSALGNFQQPLRALLYLV P GAKSLV+H WWIPK YLNGRVIEMTSILGPFFHVSALPD TIF+S PDVGQQCF+E++TRRPADLLSSF+TI++VMNNLYDGL+EVLM LLKNT RENVL YLA VINKN SRAH+QVDP+SCASSGMFVNLSAVMLRLCEPFLDANL+KRDKIDPQYVF S+RL+L LTALHASSEEV+EW ++N GK+DVS SDGENRLL SQEA+SSG S+ AKY FICECFFMTARVLNLGL+K FSDFKHLVQDI RSED L+++K M EQAPSPQL Q I+RLEKELELYSQEKLCYEAQILRDGG +Q+ALS+YRLM+VWLV LVGGFKMPLPS CP EFASMPEHFVED ME LIFASRIP+ALDG +LDDFMNFIIMFM SPEY+RNPYLRAKMVEVLNCWMPRRSGS+ATSTLFEGHQLSLEYLV+NLLK+YVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNT EWERRP+QERQERTRLFH+QENIIRIDMKLANEDV++LAFTSEQIT PFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPK LLKQIV IYVHLARGDK IFP+AI +DGRSYNEQ+FSAA VL+RIGEDMR+IQEF+ELG KAKVAASEA DAEAALG+IPDEFLDPIQYTLM+DPVILPSSRITVDRPVIQRHLLSD+TDPFNRSHLT DMLIPD ELK +I+EF+RS EL++HG++L++QS+K TIQTTD + LIE
Sbjct: 1 MATSKPQRTPAEIEDIILRKILLVSLVDSMESDTRIVYLEMTAAEILSEGKELRLSRDLMERVMIDRLSGNYVSAEPPFQYLVNCYRRAHEEGKKIASMKDKNVRSEMELAVKQAKKLAVSYCRIHLGNPGMFPNWEMVN----SSVSPLLPLVFSEVSSSVDAFGG-GSSTGVTSPPGFLDELFKDGDFDSMDPILKQLYEDLRGAVLKVSALGNFQQPLRALLYLVKYPVGAKSLVNHPWWIPKSVYLNGRVIEMTSILGPFFHVSALPDNTIFKSDPDVGQQCFSESATRRPADLLSSFTTIKTVMNNLYDGLAEVLMSLLKNTTIRENVLGYLAAVINKNSSRAHLQVDPLSCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPQYVFLSTRLELRGLTALHASSEEVSEWINQHNSGKIDVSKEGSDGENRLLASQEATSSGNGSGGPSILQCDNPISSSSEKAKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRSEDHLSTMKTMLEQAPSPQLQQEISRLEKELELYSQEKLCYEAQILRDGGLLQRALSYYRLMIVWLVGLVGGFKMPLPSPCPMEFASMPEHFVEDAMELLIFASRIPRALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSTATSTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRLFHTQENIIRIDMKLANEDVSLLAFTSEQITVPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKELLKQIVKIYVHLARGDKEKIFPAAIIRDGRSYNEQIFSAAVDVLRRIGEDMRIIQEFIELGAKAKVAASEAMDAEAALGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTVDMLIPDTELKEKIEEFIRSHELQKHGEDLNLQSTKTTIQTTDTSKLIE 1039
BLAST of DCAR_011063 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068U3U3 (U-box domain-containing protein {ECO:0000259|PROSITE:PS51698})
HSP 1 Score: 1764.97 bits (4570), Expect = 0.000e+0
Identity = 857/1044 (82.09%), Postives = 952/1044 (91.19%), Query Frame = 0
Match: A0A068U3U3 (U-box domain-containing protein {ECO:0000259|PROSITE:PS51698})
HSP 1 Score: 1764.97 bits (4570), Expect = 0.000e+0
Identity = 857/1044 (82.09%), Postives = 952/1044 (91.19%), Query Frame = 0
Query: 1 MASSKPQRSPAEIEDIILRKIFLVSLLDSMESDSRVVYLEMTAAEILSEGKDLRLSRDLMERVLIDRLSGNFVAAEPPFTYLLGCYRRAYDEGKKVLSMKDKNLSADMVAVIKQARKLAVSYCRIHLGNPDMFPNWDNANGSNKSSVSQLLPLIFSEVSSSVDGFGGSGSAAGVSCPPGFLDEFIKESDFDSVDPILKQLYEDLRGSVLTVSALGNFQQPLRALLYLVNTPSGAKSLVSHRWWIPKGAYLNGRVIEMTSILGPFFHVSALPDQTIFRSQPDVGQQCFAEASTRRPADLLSSFSTIRSVMNNLYDGLSEVLMCLLKNTNTRENVLQYLAEVINKNKSRAHIQVDPISCASSGMFVNLSAVMLRLCEPFLDANLSKRDKIDPQYVFSSSRLDLSELTALHASSEEVTEWFTKNNPGKVDVSDANSDGENRLLQSQEASSSGSNLGG---------------SAKYSFICECFFMTARVLNLGLIKGFSDFKHLVQDIQRSEDSLASLKAMQEQAPSPQLNQNIARLEKELELYSQEKLCYEAQILRDGGFIQQALSFYRLMVVWLVRLVGGFKMPLPSTCPREFASMPEHFVEDVMEFLIFASRIPKALDGAILDDFMNFIIMFMGSPEYVRNPYLRAKMVEVLNCWMPRRSGSSATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPSQERQERTRLFHSQENIIRIDMKLANEDVTMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKHNIFPSAITKDGRSYNEQLFSAAASVLQRIGEDMRVIQEFVELGNKAKVAASEAKDAEAALGEIPDEFLDPIQYTLMQDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPDIELKAQIDEFLRSRELKRHGDNLSMQSSKATIQTTDDTPLIE 1029
MA+SKPQR+P EIEDIILRKIFLVSL+DSME+DSRVVYLEMTAAEILSEG+DLRLSRDLMER+LIDRLSGN+VAAEPPF YL+ CYRRAY+EG+K+ SMKDKN+ ++M V KQA+KLA SYCRIHLGNPDMFPNWD +NKSSVS LLPLIFSEVS++VDGF SG GVS PPGFL+EF+++ D+DS++PI+KQLYEDLRGSVL VSALGNFQQPLRALL LVN P G+K+LV+H WWIPKG YLNGRVIEMTSILGPFFHVSALPD TIF+SQPDVGQQCF+E+STRRPADLLSSF+TI++VMNNLYDGL+EVL CLLKNT+TRENVL+YLAEVINKN SRAHIQVDP+S ASSGMFVNLSAVML LCEPFLDA+LSKRDK+DP+YVFSS RL+L LTALHASSEEV+EW +++NP + ++DGENRLL SQEA+SSGSN+GG +AK+SFICECFFMTARVLNLGL+K FSDFKHLVQDI R ED+L+++KAMQ QAPSPQL Q+I RLEKE+ELYSQEKLCYEAQILRDGG +Q+ALSFY+LMVVWLV L GGF MPLPSTCP EFA+MPEHFVED ME LIFASRIP+ALDG +LDDFMNFIIMFM SPE++RNPYLRAKMVEVLNCWMPRRSGSSAT+TLFEGHQLSLEYLV+NLLK+YVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLN+LNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRP+QERQERTR FHSQENIIRIDMKLANEDV+MLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSL+LKDPEKYEFRPK LLKQIVNIYV+LARGDK IFP+AIT+DGRSYNEQLFSAAA VL+RIGED R IQEF++LG KAK AA+EA DAEAALGEIPD+FLDPIQYTLM+DPVILPSS+ITVDRPVIQRHLLSD TDPFNRSHLTADMLIPD ELKA+I+EF+ S +LK+ G++LS+Q+ KATIQTTD T LIE
Sbjct: 1 MATSKPQRTPEEIEDIILRKIFLVSLIDSMENDSRVVYLEMTAAEILSEGRDLRLSRDLMERILIDRLSGNYVAAEPPFQYLINCYRRAYEEGRKITSMKDKNVRSEMELVAKQAKKLAASYCRIHLGNPDMFPNWD----TNKSSVSPLLPLIFSEVSTAVDGFDSSG---GVSSPPGFLEEFLRDGDYDSMEPIMKQLYEDLRGSVLKVSALGNFQQPLRALLMLVNYPVGSKALVNHPWWIPKGMYLNGRVIEMTSILGPFFHVSALPDHTIFKSQPDVGQQCFSESSTRRPADLLSSFTTIKTVMNNLYDGLAEVLRCLLKNTSTRENVLEYLAEVINKNASRAHIQVDPLSSASSGMFVNLSAVMLLLCEPFLDASLSKRDKVDPRYVFSSPRLELRGLTALHASSEEVSEWISRSNPSR------STDGENRLLHSQEATSSGSNVGGPSSLNDDKPMSHCSKNAKFSFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLSTMKAMQGQAPSPQLQQDIDRLEKEMELYSQEKLCYEAQILRDGGLLQRALSFYQLMVVWLVGLAGGFGMPLPSTCPMEFAAMPEHFVEDAMELLIFASRIPRALDGVVLDDFMNFIIMFMASPEFIRNPYLRAKMVEVLNCWMPRRSGSSATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNYLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPAQERQERTRQFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVNIYVNLARGDKQKIFPAAITRDGRSYNEQLFSAAADVLRRIGEDARTIQEFIDLGAKAKAAAAEAMDAEAALGEIPDDFLDPIQYTLMRDPVILPSSKITVDRPVIQRHLLSDNTDPFNRSHLTADMLIPDTELKARIEEFVLSNKLKKSGEDLSLQNIKATIQTTDTTSLIE 1031
BLAST of DCAR_011063 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G3ACD9 ((probable ubiquitin conjugation factor E4 {ECO:0000313|RefSeq:XP_016561349.1}))
HSP 1 Score: 1760.73 bits (4559), Expect = 0.000e+0
Identity = 858/1044 (82.18%), Postives = 941/1044 (90.13%), Query Frame = 0
Match: A0A2G3ACD9 ((probable ubiquitin conjugation factor E4 {ECO:0000313|RefSeq:XP_016561349.1}))
HSP 1 Score: 1760.73 bits (4559), Expect = 0.000e+0
Identity = 858/1044 (82.18%), Postives = 941/1044 (90.13%), Query Frame = 0
Query: 1 MASSKPQRSPAEIEDIILRKIFLVSLLDSMESDSRVVYLEMTAAEILSEGKDLRLSRDLMERVLIDRLSGNFVAAEPPFTYLLGCYRRAYDEGKKVLSMKDKNLSADMVAVIKQARKLAVSYCRIHLGNPDMFPNWDNANGSNKSSVSQLLPLIFSEVSSSVDGFGGSGSAAGVSCPPGFLDEFIKESDFDSVDPILKQLYEDLRGSVLTVSALGNFQQPLRALLYLVNTPSGAKSLVSHRWWIPKGAYLNGRVIEMTSILGPFFHVSALPDQTIFRSQPDVGQQCFAEASTRRPADLLSSFSTIRSVMNNLYDGLSEVLMCLLKNTNTRENVLQYLAEVINKNKSRAHIQVDPISCASSGMFVNLSAVMLRLCEPFLDANLSKRDKIDPQYVFSSSRLDLSELTALHASSEEVTEWFTKNNPGKVDVSDANSDGENRLLQSQEASSSG---------------SNLGGSAKYSFICECFFMTARVLNLGLIKGFSDFKHLVQDIQRSEDSLASLKAMQEQAPSPQLNQNIARLEKELELYSQEKLCYEAQILRDGGFIQQALSFYRLMVVWLVRLVGGFKMPLPSTCPREFASMPEHFVEDVMEFLIFASRIPKALDGAILDDFMNFIIMFMGSPEYVRNPYLRAKMVEVLNCWMPRRSGSSATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPSQERQERTRLFHSQENIIRIDMKLANEDVTMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKHNIFPSAITKDGRSYNEQLFSAAASVLQRIGEDMRVIQEFVELGNKAKVAASEAKDAEAALGEIPDEFLDPIQYTLMQDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPDIELKAQIDEFLRSRELKRHGDNLSMQSSKATIQTTDDTPLIE 1029
MA+SKPQR+PAEIEDIILRKI LVSL+DSMESD+R+VYLEMTAAEILSEGK+LRLSRDLMERV+IDRLSGN+V+AEPPF YL+ CYRRA++EGKK+ SMKDKN+ ++M +KQA+KLAVSYCRIHLGNP MFPNW+ N SSVS LLPL+FSEVSSSVD FGG S+ V+ PPGFLDE K+ DFDS+DPILKQLYEDLRG+VL VSALGNFQQPLRALLYLV P GAKSLV+H WWIPK YLNGRVIEMTSILGPFFHVSALPD TIF+S PDVGQQCF+E++TRRPADLLSSF+TI++VMNNLYDGL+EVLM LLKNT RENVL YLA VINKN SRAH+QVDP+SCASSGMFVNLSAVMLRLCEPFLDANL+KRDKIDPQYVF S+RL+L LTALHASSEEV+EW ++N GK+DVS SDGENRLL SQEA+SSG S+ AKY FICECFFMTARVLNLGL+K FSDFKHLVQDI RSED L+++K M EQAPSPQL Q I+RLEKELELYSQEKLCYEAQILRDGG +Q+ALS+YRLM+VWLV LVGGFKMPLPS CP EFASMPEHFVED ME LIFASRIP+ALDG +LDDFMNFIIMFM SPEY+RNPYLRAKMVEVLNCWMPRRSGS+ATSTLFEGHQLSLEYLV+NLLK+YVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNT EWERRP+QERQERTRLFHSQENIIRIDMKLANEDV++LAFTSEQIT PFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPK LLKQIV IYVHLARGDK IFP+AI +DGRSYNEQ+FSAA VL+RIGEDMR+IQEF+ELG KAKVAASEA DAEAALG+IPDEFLDPIQYTLM+DPVILPSSRITVDRPVIQRHLLSD+TDPFNRSHLT DMLIPD ELK +I+EF+RS EL++HG++L++QS+K TIQTTD + LIE
Sbjct: 1 MATSKPQRTPAEIEDIILRKILLVSLVDSMESDTRIVYLEMTAAEILSEGKELRLSRDLMERVMIDRLSGNYVSAEPPFQYLVNCYRRAHEEGKKIASMKDKNVRSEMEMAVKQAKKLAVSYCRIHLGNPGMFPNWEMVN----SSVSPLLPLVFSEVSSSVDAFGGGSSSG-VTSPPGFLDELFKDGDFDSMDPILKQLYEDLRGAVLKVSALGNFQQPLRALLYLVKYPVGAKSLVNHPWWIPKSVYLNGRVIEMTSILGPFFHVSALPDNTIFKSDPDVGQQCFSESATRRPADLLSSFTTIKTVMNNLYDGLAEVLMSLLKNTTIRENVLGYLAAVINKNSSRAHLQVDPLSCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPQYVFLSTRLELRGLTALHASSEEVSEWINQHNSGKIDVSKEGSDGENRLLASQEATSSGNGSGGPSILHCDNPISSSSEKAKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRSEDHLSTMKTMLEQAPSPQLQQEISRLEKELELYSQEKLCYEAQILRDGGLLQRALSYYRLMIVWLVGLVGGFKMPLPSPCPMEFASMPEHFVEDAMELLIFASRIPRALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSTATSTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSLLAFTSEQITVPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKELLKQIVKIYVHLARGDKEKIFPAAIIRDGRSYNEQIFSAAVDVLRRIGEDMRIIQEFIELGAKAKVAASEAMDAEAALGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTVDMLIPDTELKEKIEEFIRSHELQKHGEDLNLQSTKTTIQTTDTSKLIE 1039
BLAST of DCAR_011063 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U8G055 ((Putative ubiquitin conjugation factor E4 {ECO:0000313|EMBL:PHT91919.1}))
HSP 1 Score: 1760.73 bits (4559), Expect = 0.000e+0
Identity = 858/1044 (82.18%), Postives = 941/1044 (90.13%), Query Frame = 0
Match: A0A1U8G055 ((Putative ubiquitin conjugation factor E4 {ECO:0000313|EMBL:PHT91919.1}))
HSP 1 Score: 1760.73 bits (4559), Expect = 0.000e+0
Identity = 858/1044 (82.18%), Postives = 941/1044 (90.13%), Query Frame = 0
Query: 1 MASSKPQRSPAEIEDIILRKIFLVSLLDSMESDSRVVYLEMTAAEILSEGKDLRLSRDLMERVLIDRLSGNFVAAEPPFTYLLGCYRRAYDEGKKVLSMKDKNLSADMVAVIKQARKLAVSYCRIHLGNPDMFPNWDNANGSNKSSVSQLLPLIFSEVSSSVDGFGGSGSAAGVSCPPGFLDEFIKESDFDSVDPILKQLYEDLRGSVLTVSALGNFQQPLRALLYLVNTPSGAKSLVSHRWWIPKGAYLNGRVIEMTSILGPFFHVSALPDQTIFRSQPDVGQQCFAEASTRRPADLLSSFSTIRSVMNNLYDGLSEVLMCLLKNTNTRENVLQYLAEVINKNKSRAHIQVDPISCASSGMFVNLSAVMLRLCEPFLDANLSKRDKIDPQYVFSSSRLDLSELTALHASSEEVTEWFTKNNPGKVDVSDANSDGENRLLQSQEASSSG---------------SNLGGSAKYSFICECFFMTARVLNLGLIKGFSDFKHLVQDIQRSEDSLASLKAMQEQAPSPQLNQNIARLEKELELYSQEKLCYEAQILRDGGFIQQALSFYRLMVVWLVRLVGGFKMPLPSTCPREFASMPEHFVEDVMEFLIFASRIPKALDGAILDDFMNFIIMFMGSPEYVRNPYLRAKMVEVLNCWMPRRSGSSATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPSQERQERTRLFHSQENIIRIDMKLANEDVTMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKHNIFPSAITKDGRSYNEQLFSAAASVLQRIGEDMRVIQEFVELGNKAKVAASEAKDAEAALGEIPDEFLDPIQYTLMQDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPDIELKAQIDEFLRSRELKRHGDNLSMQSSKATIQTTDDTPLIE 1029
MA+SKPQR+PAEIEDIILRKI LVSL+DSMESD+R+VYLEMTAAEILSEGK+LRLSRDLMERV+IDRLSGN+V+AEPPF YL+ CYRRA++EGKK+ SMKDKN+ ++M +KQA+KLAVSYCRIHLGNP MFPNW+ N SSVS LLPL+FSEVSSSVD FGG S+ V+ PPGFLDE K+ DFDS+DPILKQLYEDLRG+VL VSALGNFQQPLRALLYLV P GAKSLV+H WWIPK YLNGRVIEMTSILGPFFHVSALPD TIF+S PDVGQQCF+E++TRRPADLLSSF+TI++VMNNLYDGL+EVLM LLKNT RENVL YLA VINKN SRAH+QVDP+SCASSGMFVNLSAVMLRLCEPFLDANL+KRDKIDPQYVF S+RL+L LTALHASSEEV+EW ++N GK+DVS SDGENRLL SQEA+SSG S+ AKY FICECFFMTARVLNLGL+K FSDFKHLVQDI RSED L+++K M EQAPSPQL Q I+RLEKELELYSQEKLCYEAQILRDGG +Q+ALS+YRLM+VWLV LVGGFKMPLPS CP EFASMPEHFVED ME LIFASRIP+ALDG +LDDFMNFIIMFM SPEY+RNPYLRAKMVEVLNCWMPRRSGS+ATSTLFEGHQLSLEYLV+NLLK+YVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNT EWERRP+QERQERTRLFHSQENIIRIDMKLANEDV++LAFTSEQIT PFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPK LLKQIV IYVHLARGDK IFP+AI +DGRSYNEQ+FSAA VL+RIGEDMR+IQEF+ELG KAKVAASEA DAEAALG+IPDEFLDPIQYTLM+DPVILPSSRITVDRPVIQRHLLSD+TDPFNRSHLT DMLIPD ELK +I+EF+RS EL++HG++L++QS+K TIQTTD + LIE
Sbjct: 1 MATSKPQRTPAEIEDIILRKILLVSLVDSMESDTRIVYLEMTAAEILSEGKELRLSRDLMERVMIDRLSGNYVSAEPPFQYLVNCYRRAHEEGKKIASMKDKNVRSEMEMAVKQAKKLAVSYCRIHLGNPGMFPNWEMVN----SSVSPLLPLVFSEVSSSVDAFGGGSSSG-VTSPPGFLDELFKDGDFDSMDPILKQLYEDLRGAVLKVSALGNFQQPLRALLYLVKYPVGAKSLVNHPWWIPKSVYLNGRVIEMTSILGPFFHVSALPDNTIFKSDPDVGQQCFSESATRRPADLLSSFTTIKTVMNNLYDGLAEVLMSLLKNTTIRENVLGYLAAVINKNSSRAHLQVDPLSCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPQYVFLSTRLELRGLTALHASSEEVSEWINQHNSGKIDVSKEGSDGENRLLASQEATSSGNGSGGPSILHCDNPISSSSEKAKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRSEDHLSTMKTMLEQAPSPQLQQEISRLEKELELYSQEKLCYEAQILRDGGLLQRALSYYRLMIVWLVGLVGGFKMPLPSPCPMEFASMPEHFVEDAMELLIFASRIPRALDGVLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSTATSTLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSLLAFTSEQITVPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKELLKQIVKIYVHLARGDKEKIFPAAIIRDGRSYNEQIFSAAVDVLRRIGEDMRIIQEFIELGAKAKVAASEAMDAEAALGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTVDMLIPDTELKEKIEEFIRSHELQKHGEDLNLQSTKTTIQTTDTSKLIE 1039
BLAST of DCAR_011063 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6T702 ((probable ubiquitin conjugation factor E4 {ECO:0000313|RefSeq:XP_027073980.1}))
HSP 1 Score: 1760.35 bits (4558), Expect = 0.000e+0
Identity = 856/1044 (81.99%), Postives = 951/1044 (91.09%), Query Frame = 0
Match: A0A6P6T702 ((probable ubiquitin conjugation factor E4 {ECO:0000313|RefSeq:XP_027073980.1}))
HSP 1 Score: 1760.35 bits (4558), Expect = 0.000e+0
Identity = 856/1044 (81.99%), Postives = 951/1044 (91.09%), Query Frame = 0
Query: 1 MASSKPQRSPAEIEDIILRKIFLVSLLDSMESDSRVVYLEMTAAEILSEGKDLRLSRDLMERVLIDRLSGNFVAAEPPFTYLLGCYRRAYDEGKKVLSMKDKNLSADMVAVIKQARKLAVSYCRIHLGNPDMFPNWDNANGSNKSSVSQLLPLIFSEVSSSVDGFGGSGSAAGVSCPPGFLDEFIKESDFDSVDPILKQLYEDLRGSVLTVSALGNFQQPLRALLYLVNTPSGAKSLVSHRWWIPKGAYLNGRVIEMTSILGPFFHVSALPDQTIFRSQPDVGQQCFAEASTRRPADLLSSFSTIRSVMNNLYDGLSEVLMCLLKNTNTRENVLQYLAEVINKNKSRAHIQVDPISCASSGMFVNLSAVMLRLCEPFLDANLSKRDKIDPQYVFSSSRLDLSELTALHASSEEVTEWFTKNNPGKVDVSDANSDGENRLLQSQEASSSGSNLGG---------------SAKYSFICECFFMTARVLNLGLIKGFSDFKHLVQDIQRSEDSLASLKAMQEQAPSPQLNQNIARLEKELELYSQEKLCYEAQILRDGGFIQQALSFYRLMVVWLVRLVGGFKMPLPSTCPREFASMPEHFVEDVMEFLIFASRIPKALDGAILDDFMNFIIMFMGSPEYVRNPYLRAKMVEVLNCWMPRRSGSSATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPSQERQERTRLFHSQENIIRIDMKLANEDVTMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKHNIFPSAITKDGRSYNEQLFSAAASVLQRIGEDMRVIQEFVELGNKAKVAASEAKDAEAALGEIPDEFLDPIQYTLMQDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPDIELKAQIDEFLRSRELKRHGDNLSMQSSKATIQTTDDTPLIE 1029
MA+SKPQR+P EIEDIILRKIFLVSL+DSME+DSRVVYLEMTAAEILSEG+DLRLSRDLMER+LIDRLSGN+VAAEPPF YL+ CYRRAY+EG+K+ SMKDKN+ ++M V KQA+KLA SYCRIHLGNPDMFPNWD +NKSSVS LLPLIFSEVS++VDGF SG GVS PPGFL+EF+++ D+DS++PI+KQLYEDLRGSVL VSALGN QQPLRALL LVN P G+K+LV+H WWIPKG YLNGRVIEMTSILGPFFHVSALPD TIF+SQPDVGQQCF+E+STRRPADLLSSF+TI++VMNNLYDGL+EVL CLLKNT+TRENVL+YLAEVINKN SRAHIQVDP+S ASSGMFVNLSAVML LCEPFLDA+LSKRDK+DP+YVFSS RL+L LTALHASSEEV+EW +++NP + ++DGENRLL SQEA+SSGSN+GG +AK+SFICECFFMTARVLNLGL+K FSDFKHLVQDI R ED+L+++KAMQ QAPSPQL Q+I RLEKE+ELYSQEKLCYEAQILRDGG +Q+ALSFY+LMVVWLV L GGF MPLPSTCP EFA+MPEHFVED ME LIFASRIP+ALDG +LDDFMNFIIMFM SPE++RNPYLRAKMVEVLNCWMPRRSGSSAT+TLFEGHQLSLEYLV+NLLK+YVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLN+LNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRP+QERQERTR FHSQENIIRIDMKLANEDV+MLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSL+LKDPEKYEFRPK LLKQIVNIYV+LARGDK IFP+AIT+DGRSYNEQLFSAAA VL+RIGED R IQEF++LG KAK AA+EA DAEAALGEIPD+FLDPIQYTLM+DPVILPSS+ITVDRPVIQRHLLSD TDPFNRSHLTADMLIPD ELKA+I+EF+ S +LK+ G++LS+Q+ KATIQTTD T LIE
Sbjct: 1 MATSKPQRTPEEIEDIILRKIFLVSLIDSMENDSRVVYLEMTAAEILSEGRDLRLSRDLMERILIDRLSGNYVAAEPPFQYLINCYRRAYEEGRKITSMKDKNVRSEMELVAKQAKKLAASYCRIHLGNPDMFPNWD----TNKSSVSPLLPLIFSEVSTAVDGFDSSG---GVSSPPGFLEEFLRDGDYDSMEPIMKQLYEDLRGSVLKVSALGNSQQPLRALLMLVNYPVGSKALVNHPWWIPKGMYLNGRVIEMTSILGPFFHVSALPDHTIFKSQPDVGQQCFSESSTRRPADLLSSFTTIKTVMNNLYDGLAEVLRCLLKNTSTRENVLEYLAEVINKNASRAHIQVDPLSSASSGMFVNLSAVMLLLCEPFLDASLSKRDKVDPRYVFSSPRLELRGLTALHASSEEVSEWISRSNPSR------STDGENRLLHSQEATSSGSNVGGPSSLNDDKPMSHCSKNAKFSFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLSTMKAMQGQAPSPQLQQDIDRLEKEMELYSQEKLCYEAQILRDGGLLQRALSFYQLMVVWLVGLAGGFGMPLPSTCPMEFAAMPEHFVEDAMELLIFASRIPRALDGVVLDDFMNFIIMFMASPEFIRNPYLRAKMVEVLNCWMPRRSGSSATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNYLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPAQERQERTRQFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKQLLKQIVNIYVNLARGDKQKIFPAAITRDGRSYNEQLFSAAADVLRRIGEDARTIQEFIDLGAKAKAAAAEAMDAEAALGEIPDDFLDPIQYTLMRDPVILPSSKITVDRPVIQRHLLSDNTDPFNRSHLTADMLIPDTELKARIEEFVLSNKLKKSGEDLSLQNIKATIQTTDTTSLIE 1031
BLAST of DCAR_011063 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7SXH7 (U-box domain-containing protein {ECO:0000259|PROSITE:PS51698})
HSP 1 Score: 1757.65 bits (4551), Expect = 0.000e+0
Identity = 850/1037 (81.97%), Postives = 929/1037 (89.59%), Query Frame = 0
Match: D7SXH7 (U-box domain-containing protein {ECO:0000259|PROSITE:PS51698})
HSP 1 Score: 1757.65 bits (4551), Expect = 0.000e+0
Identity = 850/1037 (81.97%), Postives = 929/1037 (89.59%), Query Frame = 0
Query: 1 MASSKPQRSPAEIEDIILRKIFLVSLLDSMESDSRVVYLEMTAAEILSEGKDLRLSRDLMERVLIDRLSGNFVAAEPPFTYLLGCYRRAYDEGKKVLSMKDKNLSADMVAVIKQARKLAVSYCRIHLGNPDMFPNWDNANGSNKSSVSQLLPLIFSEVSSSVDGFGGSGSAAGVSCPPGFLDEFIKESDFDSVDPILKQLYEDLRGSVLTVSALGNFQQPLRALLYLVNTPSGAKSLVSHRWWIPKGAYLNGRVIEMTSILGPFFHVSALPDQTIFRSQPDVGQQCFAEASTRRPADLLSSFSTIRSVMNNLYDGLSEVLMCLLKNTNTRENVLQYLAEVINKNKSRAHIQVDPISCASSGMFVNLSAVMLRLCEPFLDANLSKRDKIDPQYVFSSSRLDLSELTALHASSEEVTEWFTKNNPGKVDVSDANSDGENRLLQSQEASSSGSNLGG---------------SAKYSFICECFFMTARVLNLGLIKGFSDFKHLVQDIQRSEDSLASLKAMQEQAPSPQLNQNIARLEKELELYSQEKLCYEAQILRDGGFIQQALSFYRLMVVWLVRLVGGFKMPLPSTCPREFASMPEHFVEDVMEFLIFASRIPKALDGAILDDFMNFIIMFMGSPEYVRNPYLRAKMVEVLNCWMPRRSGSSATSTLFEGHQLSLEYLVKNLLKVYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPSQERQERTRLFHSQENIIRIDMKLANEDVTMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNIYVHLARGDKHNIFPSAITKDGRSYNEQLFSAAASVLQRIGEDMRVIQEFVELGNKAKVAASEAKDAEAALGEIPDEFLDPIQYTLMQDPVILPSSRITVDRPVIQRHLLSDATDPFNRSHLTADMLIPDIELKAQIDEFLRSRELKRHGDNLSMQSSKATIQTT 1022
MA+ KPQ SP EIEDIIL KIFLVSL DSMESDSR+VYLEMTAAEILSEG+ L+LSRDLMERVLIDRLSG+F AEPPF YL+GCYRRA DEGKK+ S KDKNL +++ V+KQA+KLAVSYCRIHLGNPDMF NWD+ G+N S+VS LLPLIFSEVSSSVDGFGGS + CPPGFL+EF ++SDFDS+DPI K LYE+LR VL VSALGNFQQPLRA LYLV P GAKSLVSHRWWIP+GAY+NGRVIEMTSILGPFFHVSALPD+ IF+ QPDVGQQCF+EASTRRPADLLSSF+TI++VMN LYDGL+EVL+ LLKN +TRE+VL+YLAEVINKN SRAHIQVDP+SCASSGMFV+LSAVMLRLCEPFLD L+K DKIDP+YVF S+RLDL LTALHASSEEV EW K++PG + S SDGE+RLLQSQEA+SSGSN G AKYSFICECFFMTARVLNLGL+K FSDFKHLVQDI R EDSLA+LKA+Q QAPSP+L +IAR EKE+ELYSQEKLCYEAQILRDG +Q ALSFYRLMVVWLVRL+GGFKMPLPSTCP EFA MPEHFVED ME LIFASRIPKALDG +LDDFMNFIIMFM SP ++RNPYLRAKMVEVLNCWMPRRSGSSAT+TLFEGH+LSLEYLV+NLLK+YVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRP+ ERQERTRLFHSQENIIRIDMKLANEDV+MLAFTSEQIT PFLLPEMVERVA+MLNYFLLQLVGPQRKSLSLKDPEKYEFRPK LLKQIV+IYVHLARGD IFP+AI+KDGRSYNEQLFSAAA VL+RIGED R+IQEF ELG +AKVAASEA DAEAALGEIPDEFLDPIQYTLM+DPVILPSSRITVDRPVIQRHLLSD TDPFNRSHLT+DMLIP+IELKA+I+EF+RS+ELK+H + L+MQ SKA +QTT
Sbjct: 1 MATKKPQLSPDEIEDIILGKIFLVSLNDSMESDSRIVYLEMTAAEILSEGRPLKLSRDLMERVLIDRLSGHFPGAEPPFPYLIGCYRRACDEGKKIASKKDKNLRSELELVVKQAKKLAVSYCRIHLGNPDMFSNWDS--GANDSAVSPLLPLIFSEVSSSVDGFGGSS----IGCPPGFLEEFFRDSDFDSLDPIFKGLYENLRSIVLKVSALGNFQQPLRAFLYLVRFPFGAKSLVSHRWWIPQGAYMNGRVIEMTSILGPFFHVSALPDRGIFQGQPDVGQQCFSEASTRRPADLLSSFTTIKTVMNGLYDGLAEVLLSLLKNADTRESVLKYLAEVINKNSSRAHIQVDPLSCASSGMFVSLSAVMLRLCEPFLD--LTKMDKIDPKYVFYSTRLDLRGLTALHASSEEVAEWINKDSPGGTEGSRQYSDGESRLLQSQEATSSGSNAHGPSFLHNAKPVPISSEKAKYSFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDSLATLKAVQGQAPSPELEADIARFEKEIELYSQEKLCYEAQILRDGTLLQHALSFYRLMVVWLVRLIGGFKMPLPSTCPMEFACMPEHFVEDAMELLIFASRIPKALDGVLLDDFMNFIIMFMASPNFIRNPYLRAKMVEVLNCWMPRRSGSSATTTLFEGHRLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTVEWERRPATERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITVPFLLPEMVERVANMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKQLLKQIVHIYVHLARGDTQKIFPTAISKDGRSYNEQLFSAAADVLRRIGEDGRIIQEFSELGARAKVAASEAMDAEAALGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDNTDPFNRSHLTSDMLIPNIELKARIEEFIRSQELKKHAEGLTMQQSKAAMQTT 1029
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7AKB7 | E-Value: 0.000e+0, PID: 83.73 | (Putative ubiquitin conjugation factor E4 {ECO:000... [more] |
| A0A314L8F4 | E-Value: 0.000e+0, PID: 83.52 | (Putative ubiquitin conjugation factor e4 {ECO:000... [more] |
| A0A1S3YMJ6 | E-Value: 0.000e+0, PID: 83.24 | (probable ubiquitin conjugation factor E4 {ECO:000... [more] |
| A0A1S4DB64 | E-Value: 0.000e+0, PID: 83.05 | (probable ubiquitin conjugation factor E4 {ECO:000... [more] |
| A0A2G3D9U6 | E-Value: 0.000e+0, PID: 82.28 | (Putative ubiquitin conjugation factor E4 {ECO:000... [more] |
| A0A068U3U3 | E-Value: 0.000e+0, PID: 82.09 | U-box domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A2G3ACD9 | E-Value: 0.000e+0, PID: 82.18 | (probable ubiquitin conjugation factor E4 {ECO:000... [more] |
| A0A1U8G055 | E-Value: 0.000e+0, PID: 82.18 | (Putative ubiquitin conjugation factor E4 {ECO:000... [more] |
| A0A6P6T702 | E-Value: 0.000e+0, PID: 81.99 | (probable ubiquitin conjugation factor E4 {ECO:000... [more] |
| D7SXH7 | E-Value: 0.000e+0, PID: 81.97 | U-box domain-containing protein {ECO:0000259|PROSI... [more] |
Pages
back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |