Resource Type:
Polypeptide
Name:
DCAR_011297
Identifier:
DCAR_011297.mRNA-protein
Sequence:
MPSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRMDGNHLIQLA
SLRRIRRLESVWDDDEHFDDVAKNRSQVAYKLLLECESKRGKDSLIRGGY
GGWLLYTAASAGDLDFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSE
VFRLLIDYALLPRFSEGYKKEDEEDTKEMPSAYKREMMNRAIHAAARGGN
LIILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFDIIDC
SDNHGNTALHVAAYRGQSAAVEALMLASPSTMYSRNNNGETFLHMAVTGF
QTSIFRRVDQQIVLMKQLVSGNVFNIEEIINAKNNDGRTALHVAIIGNIH
TDLVELLMSVSSIDINVCDNNGMTPLDLLKQRPHSASSELLTTQLISAGG
VFSCQDYSARRIMASHIRMRSAGISPGTSFKIPDSELFSHMGIRERDTRI
KSDGITSARLSTDQEEMRKVDFVMENHGPKKYAKQSSVSDTALRLKRLFG
WPKIKKKKPEILQKKIDEISLSSSEEIPISLRQRYSQRSSLANNKRTISV
SNNVQSPIAKKKFAFGLVQGVVHSMPHSNAKHRSCSSSLSKSSLSSHSSL
DKQKDIIVENNMAEESCCAPTVDAGSNVPARGNTKLMKRICFGASGSQKQ
HEIHERSFSSITS*
Sequence Length:
664
Sequence Checksum:
dd8584e7cb58260096a736a7a247be36
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_011297, derives from mRNA, DCAR_011297. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_011297 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_011297 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6L5BDJ6 ((Uncharacterized protein {ECO:0000313|EMBL:KAF1002772.1}))
HSP 1 Score: 1181.39 bits (3055), Expect = 0.000e+0
Identity = 584/662 (88.22%), Postives = 616/662 (93.05%), Query Frame = 0
Match: A0A6L5BDJ6 ((Uncharacterized protein {ECO:0000313|EMBL:KAF1002772.1}))
HSP 1 Score: 1181.39 bits (3055), Expect = 0.000e+0
Identity = 584/662 (88.22%), Postives = 616/662 (93.05%), Query Frame = 0
Query: 1 MPSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRMDGNHLIQLASLRRIRRLESVWDDDEHFDDVAKNRSQVAYKLLLECESKRGKDSLIRGGYGGWLLYTAASAGDLDFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLIDYALLPRFSEGYKKEDEEDTKEMPSAYKREMMNRAIHAAARGGNLIILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFDIIDCSDNHGNTALHVAAYRGQSAAVEALMLASPSTMYSRNNNGETFLHMAVTGFQTSIFRRVDQQIVLMKQLVSGNVFNIEEIINAKNNDGRTALHVAIIGNIHTDLVELLMSVSSIDINVCDNNGMTPLDLLKQRPHSASSELLTTQLISAGGVFSCQDYSARRIMASHIRMRSAGISPGTSFKIPDSELFSHMGIRERDTRIKSDGITSARLSTDQEEMRKVDFVMENHGPKKYAKQSSVSDTALRLKRLFGWPKIKKKKPEILQKKIDEISLSSSEEIPISLRQRYSQRSSLANNKRTISVSNNVQSPIAKKKFAFGLVQGVVHSMPHSNAKHRSCSSSLSKSSLSSHSSLDKQKDIIVENNMAEESCCAPTVDAGSNVPARGNTKLMKRICFGASGSQKQHEIHERSFSSIT 662
MPSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLR+DGNHLIQLASLRRIRRLE+VWDDDEHFDDVAK+RSQVA KLLLECESKRGKDSLIRGGYGGWLLYTAASAGDL FIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLID AL R+S+G +KE+EED KE+PS YKREMMNRAIHAAARGGNL+ILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASF+IIDC+DN GNTALHVAAYRGQSAAVEAL+L +PSTMYSRNNNGETFLHMAVTGFQTS FRRVD QIVLMKQLVS NV NI+EIINAKNNDGRTALH+AIIGN+HTDLVELLMSV SID+NVCDNN MTPLDLLKQRPHSASSELLTTQLIS GGVFSCQDYSARR+MASH+RM S GISPGTSFKIPDSELFSHMGI +R TRIKS GI SARLSTD EEMRK DFVMENH PK AKQSSV+DTALRLKRL GWPK+KKKKPEILQK IDEISLSSSE IPISLRQRYSQRSSLANNKRTISV NNVQSPI KK+F FGLVQGV+H+ PH KHRSCSSS SKSSLSSHSS DKQKDII ENN+AE SCCA TVDAG NVPARGN KLMKRICFGASGSQKQHE++++SF S++
Sbjct: 1 MPSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRIDGNHLIQLASLRRIRRLETVWDDDEHFDDVAKHRSQVAQKLLLECESKRGKDSLIRGGYGGWLLYTAASAGDLSFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLIDSALSSRYSDGNRKEEEEDGKEIPSVYKREMMNRAIHAAARGGNLMILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFNIIDCTDNQGNTALHVAAYRGQSAAVEALLLVAPSTMYSRNNNGETFLHMAVTGFQTSNFRRVDHQIVLMKQLVSENVSNIKEIINAKNNDGRTALHLAIIGNVHTDLVELLMSVGSIDVNVCDNNSMTPLDLLKQRPHSASSELLTTQLISVGGVFSCQDYSARRVMASHLRMISFGISPGTSFKIPDSELFSHMGIGDRGTRIKSVGIASARLSTDPEEMRKFDFVMENHIPKNNAKQSSVNDTALRLKRLLGWPKMKKKKPEILQKTIDEISLSSSEGIPISLRQRYSQRSSLANNKRTISVRNNVQSPIPKKRFTFGLVQGVMHAKPHPKPKHRSCSSSFSKSSLSSHSSFDKQKDIIGENNIAEASCCAITVDAGPNVPARGNKKLMKRICFGASGSQKQHEVYDQSFPSLS 662
BLAST of DCAR_011297 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7ACY6 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 855.514 bits (2209), Expect = 0.000e+0
Identity = 430/650 (66.15%), Postives = 516/650 (79.38%), Query Frame = 0
Match: A0A5B7ACY6 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 855.514 bits (2209), Expect = 0.000e+0
Identity = 430/650 (66.15%), Postives = 516/650 (79.38%), Query Frame = 0
Query: 2 PSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRMDGNHLIQLASLRRIRRLESVWDDDEHFDDVAKNRSQVAYKLLLECESKRGKDSLIRGGYGGWLLYTAASAGDLDFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLIDYALLPRFSEGYKKEDEEDTKEMPSAYKREMMNRAIHAAARGGNLIILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFDIIDCSDNHGNTALHVAAYRGQSAAVEALMLASPSTMYSRNNNGETFLHMAVTGFQTSIFRRVDQQIVLMKQLVSGNVFNIEEIINAKNNDGRTALHVAIIGNIHTDLVELLMSVSSIDINVCDNNGMTPLDLLKQRPHSASSELLTTQLISAGGVFSCQDYSARRIMASHIRMRSAGISPGTSFKIPDSELFSHMGIRERDTRIKSDGITSARLSTDQEEMRKVDFVMENHGPKKYAKQSSVSDTALRLKRLFGWPKIKKKKPEILQKKIDEISLSSSEEIPISLRQRYSQRSSLANNKRTISVSNNVQSPIAKKKFAFGLVQGVVHSMPHSNAKHRSCSSSLSKSSLSSHSSLDKQKDIIVENNMAEESCCAPTVD--AGSNVPARGNT--KLMKR-ICFGASG 646
P + FPLRWESTGD WWYASPIDWAAANGHYDLVRELLR+DGNHLI+L SLRRIRRLE+VWDDD+ F+DVAK RS+VA KLL ECE+KRGK+SLIR GYGGW+LYTAASAGDL F+ ELL+RDPLLVFGEGEYGVTDILYAAARSK+SEVFRL+ D+A+ PRF G KE EE ++PSAYK EMMNRA+HAAARGGNL ILKELLGDC + LA+RD+QGSTILHAAAGRGQVEVVKDLVASF++ID +DNHGNTALHVAA RGQ A V L+LASPS++Y +NN+GETFLHMAV+GFQT FRR+D QI LMKQLV G +FNIE+IINAKNNDGRTALHVAI+GNIH+DLVELLMSV SID+N+ D+NGMTPLDLL+QRP SASSE+L QLI+AGG+FSCQDY+ARR +ASH++ RS G SPGTSF I D+E+F + GI S G ++ E+ + D +ENH P Y K S + A LKRL WP++K++K E L+K +DE S+S+ +E PI LRQR+S+ S+L NNKRT+SV +N+ SP AKKKFA G++ GV+ +MPH + +S SSS SKSS+ S +SLDKQK I +EN++A SC D + V +G+ LM + CFG G
Sbjct: 3 PPSYFPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNHLIKLTSLRRIRRLETVWDDDKQFEDVAKCRSEVARKLLSECETKRGKNSLIRAGYGGWILYTAASAGDLGFVHELLERDPLLVFGEGEYGVTDILYAAARSKNSEVFRLVFDFAVSPRFLAGNGKEFEEHIGDIPSAYKGEMMNRAVHAAARGGNLKILKELLGDCSNVLAYRDIQGSTILHAAAGRGQVEVVKDLVASFNVIDSTDNHGNTALHVAASRGQLAVVAELILASPSSIYVKNNSGETFLHMAVSGFQTPSFRRLDPQIELMKQLVCGKMFNIEDIINAKNNDGRTALHVAIVGNIHSDLVELLMSVRSIDVNIRDSNGMTPLDLLRQRPRSASSEILIRQLITAGGIFSCQDYTARRAIASHLKKRSIGSSPGTSFGISDTEIFLYTGIENASDASGSVGHSA--------ELGQHDSTIENHNPSNYKKAGSTNYAAKHLKRLLHWPRMKERKNEGLKKTVDETSVSNLDEAPIPLRQRFSKPSALPNNKRTLSVRSNLPSPNAKKKFASGIMHGVMQAMPHLSVPRQSRSSSFSKSSICSPTSLDKQKGIFIENDIAGPSCSNQISDDRTPNLVHKQGSVSKNLMNQYFCFGGPG 644
BLAST of DCAR_011297 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AGJ8 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 853.973 bits (2205), Expect = 0.000e+0
Identity = 427/651 (65.59%), Postives = 512/651 (78.65%), Query Frame = 0
Match: A0A5J5AGJ8 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 853.973 bits (2205), Expect = 0.000e+0
Identity = 427/651 (65.59%), Postives = 512/651 (78.65%), Query Frame = 0
Query: 1 MPSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRMDGNHLIQLASLRRIRRLESVWDDDEHFDDVAKNRSQVAYKLLLECESKRGKDSLIRGGYGGWLLYTAASAGDLDFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLIDYALLPRFSEGYKKEDEEDTKEMPSAYKREMMNRAIHAAARGGNLIILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFDIIDCSDNHGNTALHVAAYRGQSAAVEALMLASPSTMYSRNNNGETFLHMAVTGFQTSIFRRVDQQIVLMKQLVSGNVFNIEEIINAKNNDGRTALHVAIIGNIHTDLVELLMSVSSIDINVCDNNGMTPLDLLKQRPHSASSELLTTQLISAGGVFSCQDYSARRIMASHIRMRSAGISPGTSFKIPDSELFSHMGIRERDTRIKSDGITSARLSTDQEEMRKVDFVMENHGPKKYAKQSSVSDTALRLKRLFGWPKIKKKKPEILQKKIDEISLSSSEEIPISLRQRYSQRSSLANNKRTISVSNNVQSPIAKKKFAFGLVQGVVHSMPHSNAKHRSCSSSLSKSSLSSHSSLDKQKDIIVENNMAEESCCAPTVDAGSNVPAR-------GNTKLMKRICFGA 644
MP + FPLRWESTGD WWYASP+DWAAANGHYDLVREL+R+DGNHLI+L SLRRIRRLE+VWDD+E FDDVAK RSQVA KLL ECE KR K+SLI+ GYGGWLLYTAASAGDL F+QELL+RDPLLVFGEGEYGVTD+LYAAARSK+SE+FRL+ D+A+ PRF G +E EE ++PSAYK EM+NRA+HAAARGGNL ILKELLGDC + L +RD+QGSTILHAAAGRGQVEVVKDL ASF++I+ +DNHGNTALHVAAYRGQ A VEAL+LASPS+++ +NN GETFL MAV+GFQT FRR+D+QI MKQLV G VFNIE+IINAKNN+GRTALHVAI GNIH++LVELLMSV SID+N+CD NGMTPLDLL+QRP SASSE+LT QLISAGG+FSCQD +ARR +ASH++ RS G SPGTSF+I D+E+F + GI SD S S+ E ++D ENH P Y K S A LKRLF WP+IK++K E L+K++DE S S+S+E PI LRQR+S+ SSL NNKRT+SV +N+ SP AKKKFA GL+ VV MP+ +S SSS SK S+SS +SLDKQK + +EN++A SC + +G P G + + + +CFG
Sbjct: 1 MPPSYFPLRWESTGDQWWYASPVDWAAANGHYDLVRELIRLDGNHLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSQVARKLLFECEIKRSKNSLIQAGYGGWLLYTAASAGDLGFVQELLERDPLLVFGEGEYGVTDVLYAAARSKNSELFRLVYDFAVSPRFLSGNGREFEEHIGDIPSAYKWEMLNRAVHAAARGGNLKILKELLGDCSNVLTYRDIQGSTILHAAAGRGQVEVVKDLAASFNVIEATDNHGNTALHVAAYRGQLAVVEALILASPSSIHVKNNAGETFLDMAVSGFQTPSFRRLDRQIEFMKQLVCGEVFNIEDIINAKNNEGRTALHVAIAGNIHSNLVELLMSVRSIDVNICDLNGMTPLDLLRQRPRSASSEILTRQLISAGGIFSCQDCTARRAIASHLKKRSIGSSPGTSFRISDTEIFLYTGIEN-----ASDASGSLGPSSYSSEQSQLDPSTENHNPSNYKKAGSTIYAAKHLKRLFHWPRIKQRKNERLEKQVDENSASNSDETPIPLRQRFSKPSSLPNNKRTLSVRSNLPSPTAKKKFASGLMHCVVQDMPNLAVPRQSRSSSFSKLSISSPNSLDKQKGVFIENDIAGPSCSSQI--SGDKTPNLIRKQGLIGKSLMNQYLCFGG 644
BLAST of DCAR_011297 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BZY4 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8548196.1}))
HSP 1 Score: 834.328 bits (2154), Expect = 0.000e+0
Identity = 424/638 (66.46%), Postives = 515/638 (80.72%), Query Frame = 0
Match: A0A5J5BZY4 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8548196.1}))
HSP 1 Score: 834.328 bits (2154), Expect = 0.000e+0
Identity = 424/638 (66.46%), Postives = 515/638 (80.72%), Query Frame = 0
Query: 2 PSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRMDGNHLIQLASLRRIRRLESVWDDDEHFDDVAKNRSQVAYKLLLECESKRGKDSLIRGGYGGWLLYTAASAGDLDFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLIDYALLPRFSEGYKKEDEEDTKEMPSAYKREMMNRAIHAAARGGNLIILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFDIIDCSDNHGNTALHVAAYRGQSAAVEALMLASPSTMYSRNNNGETFLHMAVTGFQTSIFRRVDQQIVLMKQLVSGNVFNIEEIINAKNNDGRTALHVAIIGNIHTDLVELLMSVSSIDINVCDNNGMTPLDLLKQRPHSASSELLTTQLISAGGVFSCQDYSARRIMASHIRMRSAGISPGTSFKIPDSELFSHMGIRERDTRIKSDGITSARLSTDQEEMRKVDFVMENHGPKKYAKQSSVSDTALRLKRLFGWPKIKKKKPEILQKKIDEISLSSSEEIPISLRQRYSQRSSLANNKRTISVSNNVQSPIAKKKFAFGLVQGVVHSMPHSNAKHRSCSSSLSKSSLSSHSSLDKQKDIIVENNMAEESCCAPTVDAGSN--VPARGNTKLM 637
P + FPLRWESTGD WWYASPIDWAAANGHYDLVRELLR+DGNHLI+L SLRRIRRLE+VWDD+E FDDV+K RS+VA KLLLECESK+GK+SLI+ GYGGWLLYTAASAGDL F+ +LL+RDPLLVFGEGE+GVTDILYAAARSK+SEVF+L+ D+A+ PRF G +E EE ++PSAYK EMMNRA+HAAARGGNL ILKELLGDC + L +RD+QGSTILHAAAGRGQVEVVKDLVASF+IID +DNHGNTALH AAYRGQ A VEAL+ ASPS++Y +NN+GETFLHMAV+GFQT IFRR+D+QI LMKQL G +FN+E+IINAKNNDGRTALHVAI+GNI ++LVELLMSV SID+N+ D NGMTPLDLL++RP SASSE+L+ QLI+AGG+FSCQDY+ARR +ASH+R RS G SPGTSF + D+E+F H GI SD S S+ E+ ++D +EN P + K SV+ A LKRL WPK+K++K E L+K + E S+S+S+E PI LRQR+S+ SSL NNKRT+SV +N+ SP AKKKFA G++ GV+ +MP +S SSS SKSS+SS +SLDKQK + VEN++A SC D G+ + +G+ K+M
Sbjct: 3 PPSYFPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNHLIKLTSLRRIRRLETVWDDEEQFDDVSKCRSEVARKLLLECESKKGKNSLIQAGYGGWLLYTAASAGDLGFVHQLLERDPLLVFGEGEFGVTDILYAAARSKNSEVFKLVFDFAVSPRFLAGNGREFEEHIGDIPSAYKWEMMNRAVHAAARGGNLKILKELLGDCSNVLTYRDIQGSTILHAAAGRGQVEVVKDLVASFNIIDSTDNHGNTALHAAAYRGQLAVVEALIHASPSSIYVKNNSGETFLHMAVSGFQTPIFRRLDRQIELMKQLACGKMFNMEDIINAKNNDGRTALHVAIVGNIDSNLVELLMSVRSIDVNIRDLNGMTPLDLLRERPRSASSEILSRQLITAGGIFSCQDYTARRAIASHLRKRSIGSSPGTSFIVSDTEIFLHTGIEN-----ASDASGSIGQSSHSTELSQLDSTIENQNPSIHKKAGSVNYAAKHLKRLLHWPKMKERKKERLKKLVVENSVSNSDETPIPLRQRFSKPSSLPNNKRTLSVRSNLPSPNAKKKFASGMMHGVMQAMPQLTVPRQSRSSSFSKSSISSPNSLDKQKGVFVENDIAGPSCSNQIPDDGTPNFIHKQGSLKVM 635
BLAST of DCAR_011297 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7ABT4 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 832.787 bits (2150), Expect = 0.000e+0
Identity = 416/617 (67.42%), Postives = 503/617 (81.52%), Query Frame = 0
Match: A0A5B7ABT4 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 832.787 bits (2150), Expect = 0.000e+0
Identity = 416/617 (67.42%), Postives = 503/617 (81.52%), Query Frame = 0
Query: 2 PSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRMDGNHLIQLASLRRIRRLESVWDDDEHFDDVAKNRSQVAYKLLLECESKRGKDSLIRGGYGGWLLYTAASAGDLDFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLIDYALLPRFSEGYKKEDEEDTKEMPSAYKREMMNRAIHAAARGGNLIILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFDIIDCSDNHGNTALHVAAYRGQSAAVEALMLASPSTMYSRNNNGETFLHMAVTGFQTSIFRRVDQQIVLMKQLVSGNVFNIEEIINAKNNDGRTALHVAIIGNIHTDLVELLMSVSSIDINVCDNNGMTPLDLLKQRPHSASSELLTTQLISAGGVFSCQDYSARRIMASHIRMRSAGISPGTSFKIPDSELFSHMGIRERDTRIKSDGITSARLSTDQEEMRKVDFVMENHGPKKYAKQSSVSDTALRLKRLFGWPKIKKKKPEILQKKIDEISLSSSEEI-PISLRQRYSQRSSLANNKRTISVSNNVQSPIAKKKFAFGLVQGVVHSMPHSNAKHRSCSSSLSKSSLSSHSSLDKQKDIIVENNMAEESC 617
P + FPLRWESTGD WWYASPIDWAAANGHYDLVRELLR+DGNHLI+L SLRRIRRLE+VWDDD+ F+DVAK RS+VA KLL ECE+KRGK+SLIR GYGGW+LYTAASAGDL F+ ELL+RDPLLVFGEGEYGVTDILYAAARSK+SEVFRL+ D+A+ PRF G KE EE ++PSAYK EMMNRA+HAAARGGNL ILKELLGDC D LA+RDVQGSTILHAAAGRGQVEVVKDLVASF++I+ +DNHGNTALHVAAYRGQ A VEAL+LASPS++Y +NN+GETFL AV+GFQT FRR+D+QI LMKQLV G +FNIE+IIN KN++GRTALHVAI+GNIH++LVELLMSV SID+N+ D NGMTPLDLL+QRP SASSE+L QL+SAGG+FS QD++ARR +ASH+R RS G SPGTSF++ D+E+F GI SD S S+ EM ++D +EN P + K SV+ A RLKRL WP +K++K E L+K DE +S+S++ P+ LRQR+S+ SSL ++KRT+SV +++ SP AKKKFA GL+ GV+ +MP+S +S SSS SK S+SS +SLDKQK + +EN++A SC
Sbjct: 3 PPSYFPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNHLIKLTSLRRIRRLETVWDDDKQFEDVAKCRSEVARKLLSECETKRGKNSLIRAGYGGWILYTAASAGDLGFVHELLERDPLLVFGEGEYGVTDILYAAARSKNSEVFRLVFDFAVSPRFLAGNGKEFEEHIGDIPSAYKGEMMNRAVHAAARGGNLKILKELLGDCSDLLAYRDVQGSTILHAAAGRGQVEVVKDLVASFNVIESTDNHGNTALHVAAYRGQLAVVEALILASPSSIYVKNNSGETFLDTAVSGFQTPNFRRLDRQIELMKQLVCGKMFNIEDIINVKNDEGRTALHVAIVGNIHSNLVELLMSVPSIDVNIRDLNGMTPLDLLRQRPRSASSEILMRQLVSAGGIFSSQDHTARRAIASHLRKRSIGSSPGTSFRVSDTEIFLCTGIEN-----ASDASGSVGPSSYSSEMCQLDSSIENQNPSNHDKAGSVNYAAKRLKRLLHWPMMKQRKNERLKKLADENPVSNSDQTPPLPLRQRFSKPSSLPSHKRTLSVRSDLPSPTAKKKFASGLMHGVMQAMPNSTVPRQSRSSSFSKLSISSPNSLDKQKGVFIENDIAGPSC 614
BLAST of DCAR_011297 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6P9L3 ((Ankyrin repeat-containing protein {ECO:0000313|EMBL:PSR87507.1}))
HSP 1 Score: 828.55 bits (2139), Expect = 0.000e+0
Identity = 424/652 (65.03%), Postives = 507/652 (77.76%), Query Frame = 0
Match: A0A2R6P9L3 ((Ankyrin repeat-containing protein {ECO:0000313|EMBL:PSR87507.1}))
HSP 1 Score: 828.55 bits (2139), Expect = 0.000e+0
Identity = 424/652 (65.03%), Postives = 507/652 (77.76%), Query Frame = 0
Query: 1 MPSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRMDGNHLIQLASLRRIRRLESVWDDDEHFDDVAKNRSQVAYKLLLECESKRGKDSLIRGGYGGWLLYTAASAGDLDFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLIDYALLPRFSEGYKKEDEEDTKEMPSAYKREMMNRAIHAAARGGNLIILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFDIIDCSDNHGNTALHVAAYRGQSAAVEALMLASPSTMYSRNNNGETFLHMAVTGFQTSIFRRVDQQIVLMKQLVSGNVFNIEEIINAKNNDGRTALHVAIIGNIHTDLVELLMSVSSIDINVCDNNGMTPLDLLKQRPHSASSELLTTQLISAGGVFSCQDYSARRIMASHIRMRSAGISPGTSFKIPDSELFSHMGIRERDTRIKSDGITSARLSTDQEEMRKVDFVMENHGPKKYA--KQSSVSDTALRLKRLFGWPKIKKKKPEILQKKIDEISLSSSEEIPISLRQRYSQRSSLANNKRTISVSNNVQSPIAKKKFAFGLVQGVVHSMPH-SNAKHRSCSSSLSKSSLSSHSSLDKQKDIIVENNMAEESCCAPTVDAG----SNVPARGNTKLMKR-ICFGA 644
MP + FPLRWESTGD WWYASPIDWAAANGHYDLVRELLR+DGN+LI+L SLRRIRRLE+VWDD+E FDDVAK RSQVA KL ECE+K+ K+SLIR GYGGWLLYTAASAGDL F+QELL++DPLLVFGEGEYGVTDILYAAARS++SEVFRL+ D+A PRF G +E EE E+P+AYK EMMNRA+HAAARGGNL +LKELLGDC D LAFRD+QGSTILHAAAGRGQ EVVK L+ASFDII+ +DNHGNTALHVAA+RGQ A VEAL+L SPS++Y N GETFLHM ++GFQT F R+D+QI LMKQLV G +FN E +INAKNNDGRTALHVAIIGN+H+DLVE LMS SI++N+CD+NGMTPLDL++QRP SASS++LT QLISAGG+FS QDY+ARR +ASH+RMRS G SPGTSF+I D+E+F H GI D + + GI LST E+ + D ME H A K SV+ A RLKRLF WPK+K++K E L+K D+ S S+ +E PI LRQR+S+ SSL NNKRT+SV +N+ SP AKK+FA GLVQGV+ +MPH S + SS S SS +SLDKQK + +E+++A S D G S+ N L+ + +CFG
Sbjct: 1 MPPSYFPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNNLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSQVARKLFSECETKKEKNSLIRAGYGGWLLYTAASAGDLSFVQELLEKDPLLVFGEGEYGVTDILYAAARSRNSEVFRLVYDFAASPRFLAGEGREVEEHIGEIPAAYKWEMMNRAVHAAARGGNLKVLKELLGDCSDVLAFRDMQGSTILHAAAGRGQAEVVKYLIASFDIINSTDNHGNTALHVAAHRGQLAVVEALILGSPSSIYLPNTAGETFLHMVMSGFQTPSFHRLDRQIELMKQLVCGKLFNAEGVINAKNNDGRTALHVAIIGNVHSDLVEQLMSARSINVNICDSNGMTPLDLIRQRPRSASSDILTRQLISAGGIFSSQDYTARRTIASHLRMRSIG-SPGTSFRISDAEIFLHTGI---DIALDASGIAGPSLST---EVCQHDSTMETHNESNSAHKKTPSVNLAAQRLKRLFHWPKMKERKTERLKKMGDKNSASNLDETPIPLRQRFSKPSSLPNNKRTLSVRSNLPSPTAKKRFASGLVQGVIQAMPHLSVPRRSRSSSFSKSSVSSSSTSLDKQKSVCIESDIAGPSSSNQLSDEGIPNLSHKQRSVNKSLVSQYLCFGG 645
BLAST of DCAR_011297 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6VH05 ((serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A {ECO:0000313|RefSeq:XP_027101961.1, ECO:0000313|RefSeq:XP_027101962.1}))
HSP 1 Score: 826.239 bits (2133), Expect = 0.000e+0
Identity = 429/672 (63.84%), Postives = 512/672 (76.19%), Query Frame = 0
Match: A0A6P6VH05 ((serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A {ECO:0000313|RefSeq:XP_027101961.1, ECO:0000313|RefSeq:XP_027101962.1}))
HSP 1 Score: 826.239 bits (2133), Expect = 0.000e+0
Identity = 429/672 (63.84%), Postives = 512/672 (76.19%), Query Frame = 0
Query: 1 MPSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRMDGNHLIQLASLRRIRRLESVWDDDEHFDDVAKNRSQVAYKLLLECESKRGKDSLIRGGYGGWLLYTAASAGDLDFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLIDYALLPRFSEGYKKEDEEDTKEMPSAYKREMMNRAIHAAARGGNLIILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFDIIDCSDNHGNTALHVAAYRGQSAAVEALMLASPSTMYSRNNNGETFLHMAVTGFQTSIFRRVDQQIVLMKQLVSGNVFNIEEIINAKNNDGRTALHVAIIGNIHTDLVELLMSVSSIDINVCDNNGMTPLDLLKQRPHSASSELLTTQLISAGGVFSCQDYSARRIMASHIRMRSAGISPGTSFKIPDSELFSHMGIRERDTRIKSDGITSARLSTDQEEMRKVDFVMENHGPKKYAKQSSVSDTALRLKRLFGWPKIKKKKPEILQKKIDEISLSSSEEIPISLRQRYSQRSSLANNKRTISVSNNVQSPIAKKKFAFGLVQGVVHSMPHSNAKHRSCSSSLSKSSLSSHSSLDKQKDIIVENNMAEESCCAPTVD---AGSNVPARG--NTKLMKR-ICFGASGSQ---------KQHEIHERS 657
MP T PLRWESTGD WWYASPIDWAAANGHYDLVRELLR+DGNHLI L SLRRIRRLE+VWDD++ FDDVA+ RS VA KLL+ECESK+GK+SL+R GYGGWLLYTA+SAGDL F++ELL RDPLLVFGEGEYGVTDILYAAARSK+S+VFR+L D+A+ PRF +E EE E+P+AYK EM+NRAIHAAARGGNL +LKELLGDC D L++RD+QG+TILHAAAGRGQVEVVKDL+ASFD+I+ DN GNTALHVAA RGQ A VE+L+LA+PS++YS+NN GETFLH+AVTGFQT FRR+D+QI LMKQLV G +F+IEEIINAKNNDGRTALH+AIIGNIH+DLVELLM+ I++N+ D GMTPLD+L+QRPHS SS++L QLISAGG+FSCQDYS R+ +ASH+RMRS G SPGTSF+ D E+F + GI SD S LS E D +E K K +VS A RLK+L WPK+K K+ + +K + E S+ SE PI LRQR+S+ SSL NNKRT+SV +N+ SP AKKK A GLV GV+ +P N RS SSS SKSS SSHSSLDKQK I +EN++A SC D + S VP G N KLM + +CFG G + +EI+ER+
Sbjct: 1 MPPTYLPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNHLITLTSLRRIRRLETVWDDEKQFDDVARCRSLVAKKLLVECESKKGKNSLVRAGYGGWLLYTASSAGDLGFVRELLDRDPLLVFGEGEYGVTDILYAAARSKNSDVFRVLFDFAVSPRFPSSNGRELEEPIAEIPAAYKFEMLNRAIHAAARGGNLTVLKELLGDCSDVLSYRDIQGATILHAAAGRGQVEVVKDLIASFDVINSVDNQGNTALHVAASRGQLAVVESLILATPSSIYSKNNAGETFLHVAVTGFQTPGFRRLDRQIELMKQLVCGRIFDIEEIINAKNNDGRTALHLAIIGNIHSDLVELLMTARFINVNIRDMEGMTPLDILRQRPHSVSSDILAKQLISAGGIFSCQDYSTRKAIASHLRMRSIGGSPGTSFRTSDMEIFLYTGIEN-----ISDAGGSVGLSPCSTETNHHDSSLETSSTTKRKKLHTVSYAARRLKQLLHWPKMKDKRADRCKKSVGEHSICPSEGPPIPLRQRFSRPSSLPNNKRTLSVRSNLPSPSAKKKLASGLVHGVMQGIPSVNVSRRSRSSSFSKSSFSSHSSLDKQKGIQIENDIAGASCSRQIGDGDGSPSAVPKLGPINKKLMNQLLCFGGPGQSAKAPTSSGLQPYEIYERA 667
BLAST of DCAR_011297 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068V7L9 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 823.543 bits (2126), Expect = 0.000e+0
Identity = 429/672 (63.84%), Postives = 512/672 (76.19%), Query Frame = 0
Match: A0A068V7L9 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 823.543 bits (2126), Expect = 0.000e+0
Identity = 429/672 (63.84%), Postives = 512/672 (76.19%), Query Frame = 0
Query: 1 MPSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRMDGNHLIQLASLRRIRRLESVWDDDEHFDDVAKNRSQVAYKLLLECESKRGKDSLIRGGYGGWLLYTAASAGDLDFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLIDYALLPRFSEGYKKEDEEDTKEMPSAYKREMMNRAIHAAARGGNLIILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFDIIDCSDNHGNTALHVAAYRGQSAAVEALMLASPSTMYSRNNNGETFLHMAVTGFQTSIFRRVDQQIVLMKQLVSGNVFNIEEIINAKNNDGRTALHVAIIGNIHTDLVELLMSVSSIDINVCDNNGMTPLDLLKQRPHSASSELLTTQLISAGGVFSCQDYSARRIMASHIRMRSAGISPGTSFKIPDSELFSHMGIRERDTRIKSDGITSARLSTDQEEMRKVDFVMENHGPKKYAKQSSVSDTALRLKRLFGWPKIKKKKPEILQKKIDEISLSSSEEIPISLRQRYSQRSSLANNKRTISVSNNVQSPIAKKKFAFGLVQGVVHSMPHSNAKHRSCSSSLSKSSLSSHSSLDKQKDIIVENNMAEESCCAPTVD---AGSNVPARG--NTKLMKR-ICFGASG---------SQKQHEIHERS 657
MP T PLRWESTGD WWYASPIDWAAANGHYDLVRELLR+DGNHLI L SLRRIRRLE+VWDD++ FDDVA+ RS VA KLL+ECE+K+GK+SL+R GYGGWLLYTA+SAGDL F++ELL RDPLLVFGEGEYGVTDILYAAARSK+S+VFR+L D+A+ PRF +E EE E+P+AYK EM+NRAIHAAARGGNL +LKELLGDC D L++RD+QG+TILHAAAGRGQVEVVKDL+ASFD+I+ DN GNTALHVAA RGQ A VE+L+LASPS++YS+NN GETFLH+AVTGFQT FRR+D+QI LMKQLV G +F+IEEIINAKNNDGRTALH+AIIGNIH+DLVELLM+ I++N+ D GMTPLD+L+QRPHS SS++L QLISAGG+FSCQDYS R+ +ASH+RMRS G SPGTSF+ D E+F + GI SD S LS E D +E K K +VS A RLK+L WPK+K K+ + +K + E S+ SE PI LRQR+S+ SSL NNKRT+SV +N+ SP AKKK A GLV GV+ +P N RS SSS SKSS SSHSSLDKQK I +EN++A SC D + S VP G N KLM + +CFG G + +EI+ER+
Sbjct: 1 MPPTYLPLRWESTGDQWWYASPIDWAAANGHYDLVRELLRLDGNHLITLTSLRRIRRLETVWDDEKQFDDVARCRSLVAKKLLVECENKKGKNSLVRAGYGGWLLYTASSAGDLGFVRELLDRDPLLVFGEGEYGVTDILYAAARSKNSDVFRILFDFAVSPRFPSSNGRELEEPIAEIPAAYKFEMLNRAIHAAARGGNLTVLKELLGDCSDVLSYRDIQGATILHAAAGRGQVEVVKDLIASFDVINSVDNQGNTALHVAASRGQLAVVESLILASPSSIYSKNNAGETFLHVAVTGFQTPGFRRLDRQIELMKQLVCGRIFDIEEIINAKNNDGRTALHLAIIGNIHSDLVELLMTARFINVNIRDMEGMTPLDILRQRPHSVSSDILAKQLISAGGIFSCQDYSTRKAIASHLRMRSIGGSPGTSFRTSDMEIFLYTGIEN-----VSDAGGSVGLSPCSTETNHHDSSLETSSTTKRKKLHTVSYAARRLKQLLHWPKMKDKRADRCKKSVGEHSICPSEGPPIPLRQRFSRPSSLPNNKRTLSVRSNLPSPSAKKKLASGLVHGVMQGIPSVNVSRRSRSSSFSKSSFSSHSSLDKQKGIQIENDIAGASCSRLIGDGDGSPSAVPKLGPINKKLMNQLLCFGGPGQCAKAPTSSGLQPYEIYERA 667
BLAST of DCAR_011297 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RJF6 ((Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A like {ECO:0000313|EMBL:PSS30162.1}))
HSP 1 Score: 813.527 bits (2100), Expect = 0.000e+0
Identity = 418/652 (64.11%), Postives = 502/652 (76.99%), Query Frame = 0
Match: A0A2R6RJF6 ((Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A like {ECO:0000313|EMBL:PSS30162.1}))
HSP 1 Score: 813.527 bits (2100), Expect = 0.000e+0
Identity = 418/652 (64.11%), Postives = 502/652 (76.99%), Query Frame = 0
Query: 1 MPSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRMDGNHLIQLASLRRIRRLESVWDDDEHFDDVAKNRSQVAYKLLLECESKRGKDSLIRGGYGGWLLYTAASAGDLDFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLIDYALLPRFSEGYKKEDEEDTKEMPSAYKREMMNRAIHAAARGGNLIILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFDIIDCSDNHGNTALHVAAYRGQSAAVEALMLASPSTMYSRNNNGETFLHMAVTGFQTSIFRRVDQQIVLMKQLVSGNVFNIEEIINAKNNDGRTALHVAIIGNIHTDLVELLMSVSSIDINVCDNNGMTPLDLLKQRPHSASSELLTTQLISAGGVFSCQDYSARRIMASHIRMRSAGISPGTSFKIPDSELFSHMGIRERDTRIKSDGITSARLSTDQEEMRKVDFVMENHGPKKYA--KQSSVSDTALRLKRLFGWPKIKKKKPEILQKKIDEISLSSSEEIPISLRQRYSQRSSLANNKRTISVSNNVQSPIAKKKFAFGLVQGVVHSMPH-SNAKHRSCSSSLSKSSLSSHSSLDKQKDIIVENNMAEESCCAPTVDAGS----NVPARGNTKLMKR-ICFGA 644
MP + PLRWESTGD WWYASPIDWAAANGHYDLVRELL +DGN+LI L SLRRIRRLE+VWDD+E FDDVAK RSQVA KL ECE+K+ K+SLIR GYGGWLLYTAASAGDL F+QELL++DPLLVFGE EYGVTDILYAAARS++SEVFRL+ D+A+ PRF G +E EE E+P+AYK EMMNRA+HAAARGGNL+ LKELLGDC D LAFRD+QGSTILHAAAGRGQ +VVK L+ASFDII+ +DNHGNTALHVAA+RGQ A VEAL+L SPS++Y RN GETFLHM ++GFQT F R+D+QI LMKQLV G +F E +INAKNNDGRTALHVA+IGN+H+DLVE LMS SI++N+ D+NGMTPLDL+KQRP SASS++LT QLISAGG+FS QDY+ARR +ASH+RMRS G SPGTSF+I D+E+F H GI D + + G+ LST E+ + ME H K A K SV+ A +LKRLF WPK+K++K E L+K ++ S SS +E PI LRQR+S+ SSL NNKRT+SV +N+ SP AKK+FA GLVQGV+ +MPH S + SS S SS SLDKQK + +E+++A S D G+ N N LM + +CFG
Sbjct: 1 MPPSYLPLRWESTGDQWWYASPIDWAAANGHYDLVRELLHLDGNNLINLTSLRRIRRLETVWDDEEQFDDVAKCRSQVARKLFSECETKKEKNSLIRAGYGGWLLYTAASAGDLSFVQELLEKDPLLVFGEVEYGVTDILYAAARSRNSEVFRLVYDFAVSPRFLAGEGREVEEHIGEIPAAYKWEMMNRAVHAAARGGNLMALKELLGDCSDVLAFRDMQGSTILHAAAGRGQAKVVKYLIASFDIINSTDNHGNTALHVAAHRGQLAVVEALILGSPSSIYLRNAAGETFLHMVMSGFQTPSFHRLDRQIELMKQLVCGKLFAAEGVINAKNNDGRTALHVAVIGNVHSDLVEQLMSARSINVNIRDSNGMTPLDLIKQRPRSASSDILTRQLISAGGIFSSQDYTARRTIASHLRMRSIG-SPGTSFRISDTEIFLHTGI---DIALDASGMARPSLST---EVSQHFPTMETHDASKSAHKKTPSVNLAAQQLKRLFHWPKMKERKTERLKKMGNKNSASSLDETPIPLRQRFSKPSSLPNNKRTLSVRSNLPSPTAKKRFASGLVQGVIQAMPHLSVPRRSRSSSFSKSSVSSSSISLDKQKSVWIESDIAGPSSSNQISDEGTPNLINKQRSVNKSLMNQYLCFGG 645
BLAST of DCAR_011297 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6I5L6 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 804.283 bits (2076), Expect = 0.000e+0
Identity = 415/658 (63.07%), Postives = 503/658 (76.44%), Query Frame = 0
Match: F6I5L6 (Ankyrin_rpt-contain_dom domain-containing protein {ECO:0000259|Pfam:PF12796})
HSP 1 Score: 804.283 bits (2076), Expect = 0.000e+0
Identity = 415/658 (63.07%), Postives = 503/658 (76.44%), Query Frame = 0
Query: 1 MPSTDFPLRWESTGDHWWYASPIDWAAANGHYDLVRELLRMDGNHLIQLASLRRIRRLESVWDDDEHFDDVAKNRSQVAYKLLLECESKRGKDSLIRGGYGGWLLYTAASAGDLDFIQELLKRDPLLVFGEGEYGVTDILYAAARSKSSEVFRLLIDYALLPRFSEGYKKEDEEDTKEMPSAYKREMMNRAIHAAARGGNLIILKELLGDCCDALAFRDVQGSTILHAAAGRGQVEVVKDLVASFDIIDCSDNHGNTALHVAAYRGQSAAVEALMLASPSTMYSRNNNGETFLHMAVTGFQTSIFRRVDQQIVLMKQLVSGNVFNIEEIINAKNNDGRTALHVAIIGNIHTDLVELLMSVSSIDINVCDNNGMTPLDLLKQRPHSASSELLTTQLISAGGVFSCQDYSARRIMASHIRMR-SAGISPGTSFKIPDSELFSHMGIRERDTRIKSDGITSARLSTDQEEMRKVDFVMENHGPKKYAKQSSVSDTALRLKRLFGWPKIKKKKPEILQKKIDEISLSSS------EEIPISLRQRYSQRSSLANNKRTISVSNNVQSPIAKKKFAFGLVQGVVHSMPHSNAKHRSCSSSLSKSSLSSHSSLDKQKDIIVENNMAEESCCAPTVDAGS----NVPARGNTKLMKR-ICFGASG 646
MP + FPLRWESTGD WW+ASPIDWAAANGHYDLVRELLR+D NHLI+L SLRR+RRLE+VWDD+E F DVA+ RSQVA KLL+E ESK+GK+SLIR GYGGW LYTAASAGDL F+QELL+RDPLLVFGEGEYGVTDILYAAARSK+ +VFRL+ D+A+ PRFS G E EE E+PS +K EM+NRA+HAAARGGNL ILKELL DC D LA+RD+QGSTILHAAAGRGQVEVVK+LVASFDII+ +DN GNTALHVAAYRGQ A VEAL+LASPS++ +NN GETFLHMAV+GFQT FRR+D+Q+ LMKQLV G VFN+EE+INAKNNDGRTALH+AIIGNIH+DLVE L + SID+N+ D +GMTPLDLL+QRP SASSE+L QLISAGG+FSCQDY+ARR + SH++M+ + G SPGTSF I D+E+F GI E ++ + D S LS+ + + +EN Y K ++V+ A RLK L WP+ K+KKPE +K D+ S+ S +E P LRQR+S+ +L+NNKRT++V +N+ SP+AKKKFA GL G++ SMPH RS SSS SKSS+SS SLDKQK I VE++ S G+ + N +LM + CFGA G
Sbjct: 1 MPPSYFPLRWESTGDQWWFASPIDWAAANGHYDLVRELLRIDSNHLIKLTSLRRVRRLETVWDDEEQFHDVARCRSQVAQKLLVEGESKKGKNSLIRSGYGGWFLYTAASAGDLGFVQELLERDPLLVFGEGEYGVTDILYAAARSKNCQVFRLVFDFAVSPRFSTGKGGELEEQIGEIPSVFKWEMINRAVHAAARGGNLEILKELLSDCSDVLAYRDIQGSTILHAAAGRGQVEVVKELVASFDIINSTDNQGNTALHVAAYRGQLAVVEALILASPSSISLKNNAGETFLHMAVSGFQTPGFRRLDRQVELMKQLVCGKVFNMEEVINAKNNDGRTALHMAIIGNIHSDLVEHLTTARSIDVNMRDVDGMTPLDLLRQRPRSASSEILIRQLISAGGIFSCQDYTARRAIISHLKMQGTGGSSPGTSFSISDTEIFLCTGI-ENESDVSMDQ-GSGGLSSYSADTSPFESALENPNSSTYKKANTVNYAAQRLKSLLHWPRAKEKKPERFKKLGDDNSVESHKKGSNLDETPTPLRQRFSKPPALSNNKRTLAVRSNLASPVAKKKFASGLKHGIMQSMPHITIPGRSRSSSFSKSSISSPGSLDKQKGIYVESDSGRPSSSNQIFADGTPNLIHKSGSANKRLMNQYFCFGAPG 656
| Match Name | Stats | Description |
|---|---|---|
| A0A6L5BDJ6 | E-Value: 0.000e+0, PID: 88.22 | (Uncharacterized protein {ECO:0000313|EMBL:KAF1002... [more] |
| A0A5B7ACY6 | E-Value: 0.000e+0, PID: 66.15 | Ankyrin_rpt-contain_dom domain-containing protein ... [more] |
| A0A5J5AGJ8 | E-Value: 0.000e+0, PID: 65.59 | Ankyrin_rpt-contain_dom domain-containing protein ... [more] |
| A0A5J5BZY4 | E-Value: 0.000e+0, PID: 66.46 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8548... [more] |
| A0A5B7ABT4 | E-Value: 0.000e+0, PID: 67.42 | Ankyrin_rpt-contain_dom domain-containing protein ... [more] |
| A0A2R6P9L3 | E-Value: 0.000e+0, PID: 65.03 | (Ankyrin repeat-containing protein {ECO:0000313|EM... [more] |
| A0A6P6VH05 | E-Value: 0.000e+0, PID: 63.84 | (serine/threonine-protein phosphatase 6 regulatory... [more] |
| A0A068V7L9 | E-Value: 0.000e+0, PID: 63.84 | Ankyrin_rpt-contain_dom domain-containing protein ... [more] |
| A0A2R6RJF6 | E-Value: 0.000e+0, PID: 64.11 | (Serine/threonine-protein phosphatase 6 regulatory... [more] |
| F6I5L6 | E-Value: 0.000e+0, PID: 63.07 | Ankyrin_rpt-contain_dom domain-containing protein ... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |