Resource Type:
Polypeptide
Name:
DCAR_009406
Identifier:
DCAR_009406.mRNA-protein
Sequence:
MLHSPGLREATQAFVQGCCSNPSSNMPELSDTTTPKPIGTLAACRRNFIE
STDSFFFPNAQFTNHESLPSLKDSFTQFKKAFPQFSETNKVDLIRATEYN
HLSQSNHVCLDYLGIGLFSHSQTIPDCSSSSPPPQSSDFPFFRTLYKSVN
LKTQLLHGDDGSELESAIKRRIMNFLNISENDYCMVFTTNRSSAFKLVAE
SYPFRASRKLLTVYDYESEAVEGMINTSEKRGAEVISAEFKWPRFRIHSE
KLRKMLVGKKKKKKHRGLFVFPLQSRITGTTYSFQWMRTAQENGWHVLLD
ACALGPKDMNSFGLSLLHPDFLVCSFYKVYGENPTGFGCLFVKKSIIPIL
EDSTSTGMVNIVPSDMLFRSFASSPVTDTELEQASRMGRDEAGVMNHSSL
LDNTSLQTKVPARIKAKKLFEIGSSKISGNANGKSKEVSKSVLLTVQEKP
NLGENECLEIKCRGLDHVDSLGLVQISNRMRCLINWLISALIKLQYPHTE
NKISLVRIYGPKVKFDRGPALAFNVYDWKGEKVEPVLVQKLADRSNISLS
NGFLHQIWFSDNYEEEKDRFLESRCEEKERGKHKKTCNGITVVTAAFGFL
ANFEDAYRLWSFIARFLDADFVEKERWRYTALNQKTVEV*
Sequence Length:
640
Sequence Checksum:
9a9f1996b6772d07c2e83aae2c9c30f2
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_009406, derives from mRNA, DCAR_009406. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_009406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_009406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834H8Y5 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7147711.1}))
HSP 1 Score: 823.928 bits (2127), Expect = 0.000e+0
Identity = 407/647 (62.91%), Postives = 492/647 (76.04%), Query Frame = 0
Match: A0A834H8Y5 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7147711.1}))
HSP 1 Score: 823.928 bits (2127), Expect = 0.000e+0
Identity = 407/647 (62.91%), Postives = 492/647 (76.04%), Query Frame = 0
Query: 2 LHSPGLREATQAFVQGCCSNPSSNMPELSDTTTPKPIGTLAACRRNFIESTDSFFFPNAQFTNHESLPSLKDSFTQFKKAFPQFSETNKVDLIRATEYNHLSQSNHVCLDYLGIGLFSHSQ-------TIPDCSSSSPPPQSSDFPFFRTLYKSVNLKTQLLHGDDGSELESAIKRRIMNFLNISENDYCMVFTTNRSSAFKLVAESYPFRASRKLLTVYDYESEAVEGMINTSEKRGAEVISAEFKWPRFRIHSEKLRKMLVGKKKKKKHRGLFVFPLQSRITGTTYSFQWMRTAQENGWHVLLDACALGPKDMNSFGLSLLHPDFLVCSFYKVYGENPTGFGCLFVKKSIIPILEDSTSTGMVNIVPSDMLFRSFASSPVTDTELEQASRMGRDEAGVMNHSSLLDNTSLQTKVPARIKAKKLFEIGSSKISGNANGKSKEVSKSVLLTVQEKPNLGENECLEIKCRGLDHVDSLGLVQISNRMRCLINWLISALIKLQYPHTENKISLVRIYGPKVKFDRGPALAFNVYDWKGEKVEPVLVQKLADRSNISLSNGFLHQIWFSDNYEEEKDRFLES-RCEEKERGKHKKT-CNGITVVTAAFGFLANFEDAYRLWSFIARFLDADFVEKERWRYTALNQKTVEV 639
+ SP L+EATQ + GCC +P +PE +T + KP T ++CR F +T S FFPN QFTNHESLPSL++SFT F K++P++ ET +VD IR EY HLS SNH+CLDY+GIGLFSHSQ T P S+SSPPPQ +DFPFF +KSVNLK QLLHG +GSELES+IK++IM+FLNISENDY MV T NRSSAF+LVAESYPF++SRKLLTVYDYES+AVE M++TSEKRGA V+SAEF WPR RIHSEKL KM+V K+KKK +RGLFVFPLQSR+TGT+YS+QWM AQENGWH+LLDACALGPKD+ SFGLSL+ PDFLVCSFYKV+GENPTGFGCLFVKKS +PILE STSTG+V++VP + LF S TDTELEQA+ E + SS S+Q+ R + ++ S++ G S++ + VQE+ EN EI+CR +DH++SLGL+ ISNR R LINWLI A+ KLQ+P+ + I L++IYGP++KF RGPALAFNVYDW+GEKVEPVLVQKLADRSNISLS GFLH I F D YE+E+ R E + EK R K+T + + VVT A GFL NFED YRLW+F+A+FLDADFVEKERWRYTALNQKTVEV
Sbjct: 1 MQSPCLKEATQGCLHGCCPSPFLGVPETEETVS-KPRSTSSSCRHKFAVTTTSSFFPNTQFTNHESLPSLQESFTHFIKSYPEYLETAQVDQIRTQEYYHLSLSNHICLDYIGIGLFSHSQFQNQYSSTTPIASTSSPPPQYTDFPFFGISHKSVNLKLQLLHGGEGSELESSIKKKIMDFLNISENDYSMVLTANRSSAFRLVAESYPFQSSRKLLTVYDYESDAVEAMVSTSEKRGARVMSAEFTWPRLRIHSEKLGKMIVRKRKKKTNRGLFVFPLQSRVTGTSYSYQWMSMAQENGWHILLDACALGPKDVGSFGLSLIRPDFLVCSFYKVFGENPTGFGCLFVKKSTVPILECSTSTGIVSLVPPNKLFCLPEDSSGTDTELEQATGSRNQERELRKSSSFSGRMSVQSIRTGRHTKVEASQMHESEVKAEQEGPKD--SENSIQPVQEQATQSENRSSEIECRAMDHMNSLGLMLISNRARFLINWLIIAMTKLQHPNADEMIPLIQIYGPRIKFSRGPALAFNVYDWRGEKVEPVLVQKLADRSNISLSYGFLHNISFPDKYEQERGRVSERIKTGEKVRVGSKRTKSDYVNVVTVALGFLTNFEDIYRLWAFVAQFLDADFVEKERWRYTALNQKTVEV 644
BLAST of DCAR_009406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AV53 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8533786.1}))
HSP 1 Score: 819.691 bits (2116), Expect = 0.000e+0
Identity = 413/649 (63.64%), Postives = 486/649 (74.88%), Query Frame = 0
Match: A0A5J5AV53 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8533786.1}))
HSP 1 Score: 819.691 bits (2116), Expect = 0.000e+0
Identity = 413/649 (63.64%), Postives = 486/649 (74.88%), Query Frame = 0
Query: 2 LHSPGLREATQAFVQGCCSNPSSNMPELSDTTTPKPIGTLAACRRNFIESTDSFFFPNAQFTNHESLPSLKDSFTQFKKAFPQFSETNKVDLIRATEYNHLSQSNHVCLDYLGIGLFSHSQTIPDCSSSSPPP-------QSSDFPFFRTLYKSVNLKTQLLHGDDGSELESAIKRRIMNFLNISENDYCMVFTTNRSSAFKLVAESYPFRASRKLLTVYDYESEAVEGMINTSEKRGAEVISAEFKWPRFRIHSEKLRKMLVGKKKKKKHRGLFVFPLQSRITGTTYSFQWMRTAQENGWHVLLDACALGPKDMNSFGLSLLHPDFLVCSFYKVYGENPTGFGCLFVKKSIIPILEDSTSTGMVNIVPSDMLFRSFASSPVTDTELEQASRMGRDEAGVMNHSSLLDNTSLQTKVPARIKAKKLFEIGSSKISGNANGKSKEVSKSVLLTVQEKPNLGENECLEIKCRGLDHVDSLGLVQISNRMRCLINWLISALIKLQYPHTENKISLVRIYGPKVKFDRGPALAFNVYDWKGEKVEPVLVQKLADRSNISLSNGFLHQIWFSDNYEEEKDRFLE-SRCEEKERGKHKKT---CNGITVVTAAFGFLANFEDAYRLWSFIARFLDADFVEKERWRYTALNQKTVEV 639
+ S L+E TQ + GCC NP ++PE +T++ KP T AACR NF +T S FFPN QFTNHESLPSL++SFTQF KA+PQ+SETN++D IRA EY+HLS SNH+CLDY+GIGLFSHSQ CS + P Q+SDFPFF YKSVNLK QLLHG SELESAIK+RI++FLNISENDY MVFT NRSSAFKL+AESYPF++S+KLLTVYDYESEAVE MINTSEKRGA V+S+EF WPR RI S KLRKM++ K+KKKK RGLFVFPL S++TG +YS+QWM AQENGWHVLLDACALGPKDM+SFGLSL+ PDFL+CSFYKV+GENPTGF CLFVKKS IPILE STSTG+V++V LF R+ D + V ++K G ++ E K Q+ LG + EI+C+GLDHVDS+GL+ IS+R R LINWL++AL+KLQ+P+TE+K LVRIYGPK+KF+RG ALAFNVYDWKGEK+EPVLVQKLADRSNISLS GFLHQIWFSD YEEEK + +E + EEKE G HKKT C GITVVTAA GFLANF+D YRLW+F+A+FLDADFVEKERWRYTALNQKT+EV
Sbjct: 1 MQSSSLKEVTQVCLHGCCPNPFPSLPEPLNTSS-KPRSTAAACRSNFAATTTSSFFPNTQFTNHESLPSLEESFTQFTKAYPQYSETNRIDQIRAQEYHHLSLSNHICLDYIGIGLFSHSQLQTQCSPAIPVASSSSPPPQTSDFPFFSISYKSVNLKLQLLHGGQASELESAIKKRIVDFLNISENDYSMVFTANRSSAFKLLAESYPFQSSQKLLTVYDYESEAVEVMINTSEKRGARVMSSEFSWPRLRIQSTKLRKMVMSKRKKKKKRGLFVFPLHSQMTGASYSYQWMSMAQENGWHVLLDACALGPKDMDSFGLSLIRPDFLICSFYKVFGENPTGFACLFVKKSTIPILEASTSTGIVSLVQVKKLF-----------------RLPEDSSDV-----------------------------TAKQKGLETSETVESEKPTDSVEQKNAKLGGSRRAEIECKGLDHVDSVGLILISSRARYLINWLVNALMKLQHPNTEDKTPLVRIYGPKIKFNRGSALAFNVYDWKGEKIEPVLVQKLADRSNISLSYGFLHQIWFSDKYEEEKQKVIEKQKIEEKEMGGHKKTNKVCQGITVVTAAIGFLANFDDMYRLWAFVAQFLDADFVEKERWRYTALNQKTIEV 602
BLAST of DCAR_009406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5B9P9 (HMG_CoA_synt_C domain-containing protein {ECO:0000259|Pfam:PF08540})
HSP 1 Score: 817.765 bits (2111), Expect = 0.000e+0
Identity = 420/642 (65.42%), Postives = 486/642 (75.70%), Query Frame = 0
Match: A0A5J5B9P9 (HMG_CoA_synt_C domain-containing protein {ECO:0000259|Pfam:PF08540})
HSP 1 Score: 817.765 bits (2111), Expect = 0.000e+0
Identity = 420/642 (65.42%), Postives = 486/642 (75.70%), Query Frame = 0
Query: 2 LHSPGLREATQAFVQGCCSNPSSNMPELSDTTTPKPIGTLAACRRNFIESTDSFFFPNAQFTNHESLPSLKDSFTQFKKAFPQFSETNKVDLIRATEYNHLSQSNHVCLDYLGIGLFSHSQTIPDCSSSSPPPQSSDFPFFRTLYKSVNLKTQLLHGDDGSELESAIKRRIMNFLNISENDYCMVFTTNRSSAFKLVAESYPFRASRKLLTVYDYESEAVEGMINTSEKRGAEVISAEFKWPRFRIHSEKLRKMLVGKKKKKKHRGLFVFPLQSRITGTTYSFQWMRTAQENGWHVLLDACALGPKDMNSFGLSLLHPDFLVCSFYKVYGENPTGFGCLFVKKSIIPILEDSTSTGMVNIVPSDMLFRSFASSPVTDTELEQASRMGRDEAGVMNHSSLLDNTSLQTKVPARIKAKKLFEIGSSKISGNANGKSKEVSKSVLLTVQEKPNLGENECLEIKCRGLDHVDSLGLVQISNRMRCLINWLISALIKLQYPHTENKISLVRIYGPKVKFDRGPALAFNVYDWKGEKVEPVLVQKLADRSNISLSNGFLHQIWFSDNYEEEKDRFLESR-CEEKERGKHK---KTCNGITVVTAAFGFLANFEDAYRLWSFIARFLDADFVEKERWRYTALNQKTVEV 639
+ SP LRE TQ CC NP PE +T + T +ACRRNF T S FPN QFTNHESLPSL++SFTQF KA+PQ+S+TN+VD IRA EYN+LS SNH+CLDY+GIGLFS SQ S P PQ+SDFPFF YKSVNLK QLL+ GSELES IK+RIM+FLNISENDYCMVFT NRSSAFKL+AESYPF++S KLLTVYDY+SEAVE MINTSEKRGA V SAEFKWPR RIHS KLRKM+V KK+KKK RGLFVFPL SR+TG YS+QWM AQENGWHVLLD CALGPKDMNSFGLSL PDFL+CSFYKV GENPTGF CLFVKKS + ILE STSTG+V++VP +FR S VTDTELEQ S+ G E + SS S RI + + + +S E+ K+ + Q+ P E ++CRGLDHVDSLGL+ IS+R+RCLINWLI+ L+KLQ+P+TE+K+ LV+IYGPK+KFDRGPALAFNVYDWKGEK+EP+LVQKLADRSNISLS G LH IWFSD YEEEK++ +E R EEKE G +K K GITVVTAA GFL NF D YRLW+F+A+FLDADFVEKERWRYT+L+QKT+EV
Sbjct: 6 MQSPCLREVTQVCYHDCCPNPFHCFPEPQNTIS-NSRSTSSACRRNFAAITASSSFPNTQFTNHESLPSLQESFTQFTKAYPQYSKTNRVDQIRAQEYNNLSPSNHICLDYIGIGLFSRSQAGSSSSPPPPLPQNSDFPFFSISYKSVNLKLQLLNSSQGSELESTIKKRIMDFLNISENDYCMVFTANRSSAFKLLAESYPFQSSGKLLTVYDYKSEAVEAMINTSEKRGARVKSAEFKWPRLRIHSAKLRKMIVRKKRKKKKRGLFVFPLHSRMTGAIYSYQWMNMAQENGWHVLLDVCALGPKDMNSFGLSLFRPDFLICSFYKVLGENPTGFACLFVKKSTVSILEASTSTGIVSLVPVKNMFRLPEDSSVTDTELEQTSKCGMQEELLATSSSFSGPIS-----TPRIHSGRFDQEDTS-----------EIHKTEVTARQKVPENSET----VECRGLDHVDSLGLMLISSRVRCLINWLINGLMKLQHPNTEDKVPLVKIYGPKIKFDRGPALAFNVYDWKGEKIEPILVQKLADRSNISLSYGLLHHIWFSDKYEEEKEKVIERRKIEEKEMGGNKKKGKVSQGITVVTAALGFLVNFNDIYRLWAFVAQFLDADFVEKERWRYTSLSQKTIEV 626
BLAST of DCAR_009406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0GXG7 ((Pyridoxal phosphate (PLP)-dependent transferases superfamily protein {ECO:0000313|EMBL:GFZ15254.1}))
HSP 1 Score: 807.749 bits (2085), Expect = 0.000e+0
Identity = 413/647 (63.83%), Postives = 492/647 (76.04%), Query Frame = 0
Match: A0A7J0GXG7 ((Pyridoxal phosphate (PLP)-dependent transferases superfamily protein {ECO:0000313|EMBL:GFZ15254.1}))
HSP 1 Score: 807.749 bits (2085), Expect = 0.000e+0
Identity = 413/647 (63.83%), Postives = 492/647 (76.04%), Query Frame = 0
Query: 2 LHSPGLREATQAFVQGCCSNPSSNMPELSDTTTPKPIGTLAACRRNFIESTDSFFFPNAQFTNHESLPSLKDSFTQFKKAFPQFSETNKVDLIRATEYNHLSQSNHVCLDYLGIGLFSHSQ-------TIPDCSSSSPPPQSSDFPFFRTLYKSVNLKTQLLHGDDGSELESAIKRRIMNFLNISENDYCMVFTTNRSSAFKLVAESYPFRASRKLLTVYDYESEAVEGMINTSEKRGAEVISAEFKWPRFRIHSEKLRKMLVGKKKKKKHRGLFVFPLQSRITGTTYSFQWMRTAQENGWHVLLDACALGPKDMNSFGLSLLHPDFLVCSFYKVYGENPTGFGCLFVKKSIIPILEDSTSTGMVNIVPSDMLFRSFASSPVTDTELEQASRMGRDEAGVMNHSSLLDNTSLQTKVPARIKAKKLFEIGSSKISGNANGKSKEVSKSVLLTVQEKPNLGENECLEIKCRGLDHVDSLGLVQISNRMRCLINWLISALIKLQYPHTENKISLVRIYGPKVKFDRGPALAFNVYDWKGEKVEPVLVQKLADRSNISLSNGFLHQIWFSDNYEEEKDRFLESR--CEEKERGKHKKTCNGITVVTAAFGFLANFEDAYRLWSFIARFLDADFVEKERWRYTALNQKTVEV 639
+ P L+E TQ GCC + +PE T K T + CRRNF +T S FFPN QFT+HESLP L++S +QFK A+PQ+ ET +VD IRA EY HLS SNH+CLDY+GIGLFSH+Q +P S SSPPP+ S+FPFF +KSVNLK+QLLHG GSELES IK++IMNFLNISENDYCMVFT NRSSAF+L+A+SYPF+A+RKLLTVYDYESEAVE MIN+SEKRGA V+SAEF WPR RIHS KL+KM+V K+KKKK RGLF+FPLQSR+TG +YS+QWM AQENGWHVLLDACALGPKDMNSFGLSL+ PDFLVCSFYKV+GENPTGFGCLFVKKS +P+LE STS G+V++VP+ LF S TDTELEQASR+G + SS S+Q+ R + ++ S+ + G ++ S+SV +K N EI+CRGLDHVDSLGL+ ISNR R LINWLI+AL+KLQ+P+ + +I LVRIYGP++KFDRGPALAFNVYDWKGE+VEP LVQKLADRSNISLS G LH IWFSD Y+EE++R +E + E+ G + N ITVVT A GFLANFED YRLW+F+A+FLDADFVEKERWRYTALNQK VEV
Sbjct: 1 MQPPCLKEVTQVCFHGCCPSQLLGLPE-EQPTISKSRSTSSTCRRNFAVTTTSSFFPNTQFTDHESLPLLQESLSQFKNAYPQYLETIQVDQIRAQEYYHLSLSNHICLDYIGIGLFSHTQFQNQHSSILPIASCSSPPPEYSEFPFFGISHKSVNLKSQLLHGGQGSELESTIKKKIMNFLNISENDYCMVFTANRSSAFELLAKSYPFQANRKLLTVYDYESEAVETMINSSEKRGARVMSAEFTWPRLRIHSGKLKKMIVRKRKKKKIRGLFMFPLQSRVTGASYSYQWMSMAQENGWHVLLDACALGPKDMNSFGLSLIRPDFLVCSFYKVFGENPTGFGCLFVKKSTVPVLEASTSMGIVSLVPAKKLFCLPEDSSGTDTELEQASRLGNPICELPITSSFSGPISVQSIQNGRSEHVDATQMHESEATTEHQG-TEHSSQSV--QQGKKGEHSRNFSSEIECRGLDHVDSLGLILISNRSRFLINWLINALMKLQHPNADERIRLVRIYGPRIKFDRGPALAFNVYDWKGERVEPTLVQKLADRSNISLSYGSLHHIWFSDKYQEERERVIEKKKNGEKARDGNRRTKANHITVVTVALGFLANFEDIYRLWAFVAQFLDADFVEKERWRYTALNQKIVEV 643
BLAST of DCAR_009406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4M689 (Aminotran_5 domain-containing protein {ECO:0000259|Pfam:PF00266} (Fragment))
HSP 1 Score: 801.586 bits (2069), Expect = 0.000e+0
Identity = 404/647 (62.44%), Postives = 491/647 (75.89%), Query Frame = 0
Match: A0A6A4M689 (Aminotran_5 domain-containing protein {ECO:0000259|Pfam:PF00266} (Fragment))
HSP 1 Score: 801.586 bits (2069), Expect = 0.000e+0
Identity = 404/647 (62.44%), Postives = 491/647 (75.89%), Query Frame = 0
Query: 2 LHSPGLREATQAFVQGCCSNPSSNMPELSDTTTPKPIGTLAACRRNFIESTDSFFFPNAQFTNHESLPSLKDSFTQFKKAFPQFSETNKVDLIRATEYNHLSQSNHVCLDYLGIGLFSHSQ-------TIPDCSSSSPPPQSSDFPFFRTLYKSVNLKTQLLHGDDGSELESAIKRRIMNFLNISENDYCMVFTTNRSSAFKLVAESYPFRASRKLLTVYDYESEAVEGMINTSEKRGAEVISAEFKWPRFRIHSEKLRKMLVGKKKKKKHRGLFVFPLQSRITGTTYSFQWMRTAQENGWHVLLDACALGPKDMNSFGLSLLHPDFLVCSFYKVYGENPTGFGCLFVKKSIIPILEDSTSTGMVNIVPSDMLFRSFASSPVTDTELEQASRMGRDEAGVMNHSSLLDNTSLQTKVPARIKAKKLFEIGSSKISGNANGKSKEVSKSVLLTVQEKPNLGENECLEIKCRGLDHVDSLGLVQISNRMRCLINWLISALIKLQYPHTENKISLVRIYGPKVKFDRGPALAFNVYDWKGEKVEPVLVQKLADRSNISLSNGFLHQIWFSDNYEEEKDRFLES-RCEEKERGKHKKT-CNGITVVTAAFGFLANFEDAYRLWSFIARFLDADFVEKERWRYTALNQKTVEV 639
+ SP L+EATQ + GCC +P PE +T + KP T ++CR NF +T S FFPN QFTNHESLPSL++SFT F K++P++ ET +VD IR EY HLS SNH+CLDY+GIGLFS+SQ TIP S+SSPPPQ +DFP F +KSVNLK+QLLHG +GSELES+ K++IM+FLNISENDY MVFT NRSSAF+LVAESYPF++SRKLLTVYDYESEAV+ M++TSEKRGA V+SAEF WPR RIHS KL KM+V K+KKK +RGLFVFPLQSR+TGT+YS+QWM AQENGWH+LLDACALGPKD+ SFGLSL+ PDFLVCSFYKV+GENPTGFGCLFVKKS IP+LE STSTG+V ++P + LF S TDTELEQA+ E + +S S+Q+ R K + ++ S++ G S++ + VQE+ E EI+CR +DH++SLGL+ ISNR R LINWLI A+ KLQ+P+ + I L++IYGP++KF RGPALAFNVYDW+GEKVEPVLVQKLADRSNISLS GFLH I F D YE+E+ R E + EK R K+T + + VVT A GFL NFED YRLW+F+A+FLDADFVEKERWRYTALNQKTVEV
Sbjct: 1 MQSPCLKEATQGCLHGCCPSPFLGAPETEETVS-KPRSTSSSCRHNFAVTTTSSFFPNTQFTNHESLPSLQESFTHFTKSYPEYFETTQVDQIRTQEYYHLSLSNHICLDYIGIGLFSYSQFQNQYSSTIPIASTSSPPPQYTDFPIFGISHKSVNLKSQLLHGGEGSELESSTKKKIMDFLNISENDYSMVFTANRSSAFRLVAESYPFQSSRKLLTVYDYESEAVDAMVSTSEKRGARVMSAEFTWPRLRIHSAKLGKMVVRKRKKKTNRGLFVFPLQSRVTGTSYSYQWMSMAQENGWHILLDACALGPKDVGSFGLSLIRPDFLVCSFYKVFGENPTGFGCLFVKKSTIPLLESSTSTGIVCLIPPNKLFCLPEDSSGTDTELEQATGSRNQERELHKSNSFSGRMSVQSIKNGRHKKVEASQMHESEVKAEQEGPKD--SENSIQPVQEQATQSEIRSSEIECRAMDHMNSLGLMLISNRARFLINWLIIAMTKLQHPNADEMIPLIQIYGPRIKFSRGPALAFNVYDWRGEKVEPVLVQKLADRSNISLSYGFLHNISFPDKYEQERGRVSERIKTGEKVRVGSKRTKSDYVNVVTVALGFLTNFEDIYRLWAFVAQFLDADFVEKERWRYTALNQKTVEV 644
BLAST of DCAR_009406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6HP79 ((Uncharacterized protein {ECO:0000313|EMBL:CCB56485.1}))
HSP 1 Score: 792.341 bits (2045), Expect = 0.000e+0
Identity = 406/658 (61.70%), Postives = 481/658 (73.10%), Query Frame = 0
Match: F6HP79 ((Uncharacterized protein {ECO:0000313|EMBL:CCB56485.1}))
HSP 1 Score: 792.341 bits (2045), Expect = 0.000e+0
Identity = 406/658 (61.70%), Postives = 481/658 (73.10%), Query Frame = 0
Query: 2 LHSPGLREATQAFVQGCCSNPSSNMPELSDTTTPKPIGTLAACRRNFIESTDSFFFPNAQFTNHESLPSLKDSFTQFKKAFPQFSETNKVDLIRATEYNHLSQSNHVCLDYLGIGLFSHSQ---------TIPDCSSSS--PPPQSSDFPFFRTLYKSVNLKTQLLHGDDGSELESAIKRRIMNFLNISENDYCMVFTTNRSSAFKLVAESYPFRASRKLLTVYDYESEAVEGMINTSEKRGAEVISAEFKWPRFRIHSEKLRKMLVGKKKKKKHRGLFVFPLQSRITGTTYSFQWMRTAQENGWHVLLDACALGPKDMNSFGLSLLHPDFLVCSFYKVYGENPTGFGCLFVKKSIIPILEDSTSTGMVNIVPSDMLFRSFASSPVTDTELEQASRMGRDEAGVMNHSSLLDNTSLQTKVPARIKAKKLFEIGSSKISGNANGKSKEVSKSVLLT-----VQEKPNLGENECLEIKCRGLDHVDSLGLVQISNRMRCLINWLISALIKLQYPHTENKISLVRIYGPKVKFDRGPALAFNVYDWKGEKVEPVLVQKLADRSNISLSNGFLHQIWFSDNYEEEKDRFLESR-CEEKERGKHKKTCN---GITVVTAAFGFLANFEDAYRLWSFIARFLDADFVEKERWRYTALNQKTVEV 639
+HS +ATQ + GCC P +PE P T A CRR+F +T + FFPN QFTNHESLPSL++SFT F++A+PQ+SET++ D IRA EY+HL SNH+CLDY+GIGLFSH Q TI SS S P PQSS+ P F YKSVNLK+ L +G S LESA+KR+IM FLNISENDYCMVFT NR+SAFKL+AESYPF++S+KLLTVYDYESEAVE M+ TSEKRGA V+SAEF WPR R++S KLRKM+V + KKKK+RGLFVFPLQSR+TG Y + WM AQENGWHVLLDACALGPKDM++FGLSL PDFL+CSFYKV+GENPTGFGCLFVKKS +PILE STSTG+VN+VP+ LF A S TDTE EQ S+ E + SS S+Q + R + ++ K G A E SK + + VQ+ + E LEI+CRGLDHVDSLGLV IS R R LINWL++AL KL +P+TE LVRIYGP +KF+RGPALAFNV+DWKGEKVEP+L+QKLADRSNISLS GFLH +WFSD YE EK R +E R E K ++K+ GITVVTAA GFL NFED YRLW+F+A+FLDADFVEKERWRYTALNQKT+EV
Sbjct: 1 MHSLCSGDATQVCLHGCCPRPVP-LPE-PQKKVPSSRSTAADCRRDFAATTAACFFPNTQFTNHESLPSLQESFTLFEEAYPQYSETDQADRIRAQEYHHLLLSNHICLDYIGIGLFSHCQIQIKTSSPTTIASTSSPSNLPSPQSSNIPLFGISYKSVNLKSLLQYGGQESALESAMKRKIMGFLNISENDYCMVFTANRTSAFKLLAESYPFQSSQKLLTVYDYESEAVEAMVETSEKRGARVMSAEFSWPRLRVNSGKLRKMVV-RNKKKKNRGLFVFPLQSRMTGARYHYLWMNIAQENGWHVLLDACALGPKDMDTFGLSLFRPDFLICSFYKVFGENPTGFGCLFVKKSTVPILEASTSTGIVNLVPAKKLFWLPADSSGTDTEPEQTSKFEFQEE-LHTSSSFSGPLSIQKTLSGRFEYEQGETSELPKTEGTAKHDRPETSKVIEMEKPADFVQQNTKVRGKEGLEIECRGLDHVDSLGLVLISRRARYLINWLVNALTKLHHPNTEEGSPLVRIYGPNIKFERGPALAFNVFDWKGEKVEPILLQKLADRSNISLSYGFLHHLWFSDKYEAEKQRVIERRETEAKGMAQNKRKGKDDLGITVVTAALGFLTNFEDIYRLWAFVAQFLDADFVEKERWRYTALNQKTIEV 654
BLAST of DCAR_009406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5YB38 ((molybdenum cofactor sulfurase-like {ECO:0000313|RefSeq:XP_022737622.1}))
HSP 1 Score: 791.956 bits (2044), Expect = 0.000e+0
Identity = 400/658 (60.79%), Postives = 490/658 (74.47%), Query Frame = 0
Match: A0A6P5YB38 ((molybdenum cofactor sulfurase-like {ECO:0000313|RefSeq:XP_022737622.1}))
HSP 1 Score: 791.956 bits (2044), Expect = 0.000e+0
Identity = 400/658 (60.79%), Postives = 490/658 (74.47%), Query Frame = 0
Query: 2 LHSPGLREATQAFVQGCCSNP--SSNMPELSDTTTPKPIGTLAACRRNFIESTDSFFFPNAQFTNHESLPSLKDSFTQFKKAFPQFSETNKVDLIRATEYNHLSQSNHVCLDYLGIGLFSHSQ-------TIPDCSSSSP-PPQSS----DFPFFRTLYKSVNLKTQLLHGDDGSELESAIKRRIMNFLNISENDYCMVFTTNRSSAFKLVAESYPFRASRKLLTVYDYESEAVEGMINTSEKRGAEVISAEFKWPRFRIHSEKLRKMLVGKKKKKKHRGLFVFPLQSRITGTTYSFQWMRTAQENGWHVLLDACALGPKDMNSFGLSLLHPDFLVCSFYKVYGENPTGFGCLFVKKSIIPILEDSTSTGMVNIVPSDMLFRSFASSPVTDTELEQASRMGRDEAGVMNHSSLLDNTSLQTKVPARIKAKKLFEIGSSKISGNANGKS-KEVSKSVL-LTVQEKPNLGENECLEIKCRGLDHVDSLGLVQISNRMRCLINWLISALIKLQYPHTENKISLVRIYGPKVKFDRGPALAFNVYDWKGEKVEPVLVQKLADRSNISLSNGFLHQIWFSDNYEEEKDRFLESRCEEK--ERGKHKKTCN--GITVVTAAFGFLANFEDAYRLWSFIARFLDADFVEKERWRYTALNQKTVEV 639
+ S L+E +Q + GCC +P S++ P+ + K + AACRR+F T S FPN FTNHESLP++++SF +F +A+PQ+S+T +VD IRA EY HLS SNH CLDYLGIGLFS+SQ T SSS P PPQS D PFF YK+ NLKTQLLHG SELESAI++RIM FL ISENDYCMVFT N++SAFKL+AESYPF+++RKLLTVYDYESEA+E M N+SEK+GA V+SAEF WPR RI S KLRKM+V K+KKK RGLFVFPL SR+TG Y + WM AQENGWHVL+DACALGPKDM+SFGLSL HPDFL+CSFYKV+GENP+GF CLF KKS IP+LE STS+GMV ++P++ LFRS SP TDTE+++ + G S+ +Q R++ K ++I ++I+ G E+S+S + ++ NL E EI+CRGLD VDSLGLV ISNR RCLINWL++AL+KLQ+P+T+ I LVRIYGPK+KFDRG A+AFNV+DWKGEKVEPVLVQKLADRSNISLS GFLH+IWF+D Y+EEKD+ +E R E + G +K N GI VVTAA GFLANF+D Y+LW+FIA+FLDADFVEKERWRYTALNQKT+EV
Sbjct: 38 MQSSCLKEVSQVCLHGCCPSPFLSAHEPQ---SKPSKLTSSSAACRRDFASKTTSSIFPNTHFTNHESLPTVQESFAEFTEAYPQYSDTYQVDQIRAQEYYHLSLSNHTCLDYLGIGLFSYSQLQKHESSTYRIASSSFPVPPQSPPLILDIPFFGVSYKTGNLKTQLLHGGPTSELESAIRKRIMTFLKISENDYCMVFTANKTSAFKLLAESYPFQSNRKLLTVYDYESEAIEAMANSSEKKGARVLSAEFSWPRLRIQSSKLRKMVVSKEKKKTKRGLFVFPLHSRMTGARYPYLWMSIAQENGWHVLIDACALGPKDMDSFGLSLCHPDFLICSFYKVFGENPSGFACLFAKKSAIPVLETSTSSGMVGLIPAEKLFRSATESPGTDTEVDKLATPG----------SISGPVPVQASQSGRLEDGKTYKIQHAEITEKLKGLGMTEISESEKPFEIIQEDNLKEKG--EIECRGLDQVDSLGLVTISNRARCLINWLVNALLKLQHPNTKG-IPLVRIYGPKIKFDRGAAIAFNVFDWKGEKVEPVLVQKLADRSNISLSYGFLHRIWFADKYQEEKDKVIERRRNEARVKDGNKRKDKNDMGIAVVTAALGFLANFQDIYKLWAFIAQFLDADFVEKERWRYTALNQKTIEV 679
BLAST of DCAR_009406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RT04 ((Molybdenum cofactor sulfurase {ECO:0000313|EMBL:PSS33143.1}))
HSP 1 Score: 791.956 bits (2044), Expect = 0.000e+0
Identity = 401/648 (61.88%), Postives = 489/648 (75.46%), Query Frame = 0
Match: A0A2R6RT04 ((Molybdenum cofactor sulfurase {ECO:0000313|EMBL:PSS33143.1}))
HSP 1 Score: 791.956 bits (2044), Expect = 0.000e+0
Identity = 401/648 (61.88%), Postives = 489/648 (75.46%), Query Frame = 0
Query: 2 LHSPGLREATQAFVQGCCSNPSSNMPELSDTTTPKPIGTLAACRRNFIESTDSFFFPNAQFTNHESLPSLKDSFTQFKKAFPQFSETNKVDLIRATEYNHLSQSNHVCLDYLGIGLFSHSQ-------TIPDCSSSSPPPQSSDFPFFRTLYKSVNLKTQLLHGDDGSELESAIKRRIMNFLNISENDYCMVFTTNRSSAFKLVAESYPFRASRKLLTVYDYESEAVEGMINTSEKRGAEVISAEFKWPRFRIHSEKLRKMLVGKKKKKKHRGLFVFPLQSRITGTTYSFQWMRTAQENGWHVLLDACALGPKDMNSFGLSLLHPDFLVCSFYKVYGENPTGFGCLFVKKSIIPILEDSTSTGMVNIVPSDMLFRSFASSPVTDTELEQASRMGRDEAGVMNHSSLLDNTSLQTKVPARIKAKKLFEIGSSKI-SGNANGKSKEVSKSVLLTVQEKPNLGENECLEIKCRGLDHVDSLGLVQISNRMRCLINWLISALIKLQYPHTENKISLVRIYGPKVKFDRGPALAFNVYDWKGEKVEPVLVQKLADRSNISLSNGFLHQIWFSDNYEEEKDRFLESRCE-EKERGKHKKT-CNGITVVTAAFGFLANFEDAYRLWSFIARFLDADFVEKERWRYTALNQKTVEV 639
+ P ++ T + GCC + + E + K T + CRRNF +T S FFPN QFT+ ESLP L++S +QFK A+PQ+ +T +VD IRA EY HLS SNH+CLDY+GIGLFSH+Q +P SSSSPPP+ SDFP+F +KSVNLK+QLLHG GSELE +K++IMNFLNISENDYCMVFT NRSSAFKL+AESYPF+ASRKLLTVYDYESEAVE MIN SEKRGA+V+SAEFKWPR R+HS KL+KM+V K KK GLF+FPLQSR+TG +YS+QWM AQENGWH+LLDACALGPKDM+SFGLSL+HPDFLVCSFYKV+GENPTGFGCLFVKKS +P+LE STSTG+V++VP++ LF S TDTELEQASR+G + S LD S+Q+ I+ ++ + +S++ A + + S L Q K N EI+CRGLDHVD LGL+ S+R R LINWLI+AL+KLQ+P+ + +I LVRIYGP++KFDRGPALAFNVYDWKGE+VEP LVQKLADRSNISLS G LH IWF D Y EE++R ++ + EKER +++T N +TVVT A GFLANFED Y+LW+F+A+FLDADFVEKERWRYTALNQK VE
Sbjct: 1 MQPPCSKKVTPVCLHGCCPSQFLGLTE-EEPPISKSRSTTSTCRRNFAVTTTSSFFPNTQFTDLESLPLLQESLSQFKNAYPQYLKTIQVDQIRAQEYYHLSLSNHICLDYIGIGLFSHTQFQNQHSSILPIASSSSPPPECSDFPYFGISHKSVNLKSQLLHGGQGSELEFTVKKKIMNFLNISENDYCMVFTANRSSAFKLLAESYPFQASRKLLTVYDYESEAVEAMINASEKRGAQVMSAEFKWPRLRVHSGKLKKMIVRTGKNKKTTGLFMFPLQSRVTGASYSYQWMSMAQENGWHILLDACALGPKDMDSFGLSLIHPDFLVCSFYKVFGENPTGFGCLFVKKSTVPVLEASTSTGIVSLVPANKLFCLPEDSSGTDTELEQASRLGNPICELPITRSFLDPISVQS-----IRNRRSEHVDASQMHESEATTEQQGPENSNQLVQQGKGKHSTNCSSEIECRGLDHVDLLGLILTSSRSRFLINWLINALMKLQHPNADERIRLVRIYGPRIKFDRGPALAFNVYDWKGERVEPALVQKLADRSNISLSYGSLHHIWFPDKYHEERERVIDKKKNGEKERDGNRRTEANHVTVVTVALGFLANFEDIYKLWAFVAQFLDADFVEKERWRYTALNQKIVEA 642
BLAST of DCAR_009406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4ETE8 ((Uncharacterized protein {ECO:0000313|EMBL:THG19822.1}))
HSP 1 Score: 787.719 bits (2033), Expect = 0.000e+0
Identity = 414/650 (63.69%), Postives = 490/650 (75.38%), Query Frame = 0
Match: A0A4S4ETE8 ((Uncharacterized protein {ECO:0000313|EMBL:THG19822.1}))
HSP 1 Score: 787.719 bits (2033), Expect = 0.000e+0
Identity = 414/650 (63.69%), Postives = 490/650 (75.38%), Query Frame = 0
Query: 2 LHSPGLREATQAFVQGCCSNPSSNMPELSDTTTPKPIGTLAACRRNFIESTDSFFFPNAQFTNHESLPSLKDSFTQFKKAFPQFSETNKVDLIRATEYNHLSQSNHVCLDYLGIGLFSHSQ--------TIPDCSSSSPPPQSSDFPFFRTLYKSVNLKTQLLHGDDGSELESAIKRRIMNFLNISENDYCMVFTTNRSSAFKLVAESYPFRASRKLLTVYDYESEAVEGMINTSEKRGAEVISAEFKWPRFRIHSEKLRKMLVGKKKKKKHRGLFVFPLQSRITGTTYSFQWMRTAQENGWHVLLDACALGPKDMNSFGLSLLHPDFLVCSFYKVYGENPTGFGCLFVKKSIIPILEDSTSTGMVNIVPSDMLFRSFASSPVTDTELEQASRMGRD-EAGVMNHSSLLDNTSLQTKVPARIKAKKLFEIGSSKISGNANGKSKEVSKSVLLTVQE-KPNLGENECLEIKCRGLDHVDSLGLVQISNRMRCLINWLISALIKLQYPHTENKISLVRIYGPKVKFDRGPALAFNVYDWKGEKVEPVLVQKLADRSNISLSNGFLHQIWFSDNYEEEKDRFLESRCEEKERGKHKKTCNG--ITVVTAAFGFLANFEDAYRLWSFIARFLDADFVEKERWRYTALNQKTVEV 639
+ P L+EATQ + CC NP T K T + CRR+F+ +T S FF N QFTNHESLPSL++S+TQF A+PQ+SET KVD IRA +Y H+ SN VCLDY+GIGLFSHSQ SSSSPPPQSSDFPFF YKSVNLK+QLLHG +GSELES+++++IM+FLNISENDYCMVFT NRSSAFKL+AESYPF++SRKLLTVYDYESEAVE M +EKRGA V SAEF WPR RIHS+KL+ M+V K+KK+K+RGLFVFPLQSR+TGT+YS+QWM AQENGWHVLLDACALGPKDMNSFGLSL+ PDFLVCSFYKV+GENPTGFGCLFVKKS +P+LE STSTG+V +VP+ LF S TDTELEQA R+G + E G+ S L S Q R + K E S+++ E+S S+ V++ K + +I+CR LDHVDSLGL+QIS R R LINWLI+A++KL++P+ E K LV+IYGPK+KFDRGPALAFNVYDWKG KVEPVLVQKLADRSNISLS GF+H IWF+D YEEE++R + EK + KT G I VVT A GFLANFED YRLW+F+A+FLDADFVEKERWRYTALNQKTVE+
Sbjct: 1 MQPPCLKEATQVCLHNCCPNPLFLSISEPHQTISKSSSTSSTCRRDFVVTTTSSFFQNTQFTNHESLPSLQESYTQFTNAYPQYSET-KVDRIRARDYYHICLSNRVCLDYIGIGLFSHSQLQNQYSSTIPIASSSSSPPPQSSDFPFFGVSYKSVNLKSQLLHGGEGSELESSMRKKIMDFLNISENDYCMVFTVNRSSAFKLLAESYPFQSSRKLLTVYDYESEAVEAMTIAAEKRGARVRSAEFTWPRLRIHSKKLKTMVVRKRKKQKNRGLFVFPLQSRVTGTSYSYQWMSMAQENGWHVLLDACALGPKDMNSFGLSLIRPDFLVCSFYKVFGENPTGFGCLFVKKSTVPVLESSTSTGIVTLVPAKKLFSLPDDSSGTDTELEQAPRLGNNQEPGLPTSSCLSGPVSAQN---GRSEQLKTSETHKSEVT--------EISDSLSQFVEQVKGKNSRKKKSDIECRCLDHVDSLGLIQISRRARYLINWLINAMMKLEHPNREEKTPLVKIYGPKIKFDRGPALAFNVYDWKGAKVEPVLVQKLADRSNISLSYGFIHHIWFADKYEEERERVI-----EKSKNGENKTTKGDRIRVVTVALGFLANFEDMYRLWAFVAQFLDADFVEKERWRYTALNQKTVEL 633
BLAST of DCAR_009406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P3ZHE6 ((uncharacterized protein LOC107414461 {ECO:0000313|RefSeq:XP_015878067.1}))
HSP 1 Score: 786.178 bits (2029), Expect = 0.000e+0
Identity = 407/663 (61.39%), Postives = 489/663 (73.76%), Query Frame = 0
Match: A0A6P3ZHE6 ((uncharacterized protein LOC107414461 {ECO:0000313|RefSeq:XP_015878067.1}))
HSP 1 Score: 786.178 bits (2029), Expect = 0.000e+0
Identity = 407/663 (61.39%), Postives = 489/663 (73.76%), Query Frame = 0
Query: 2 LHSPGLREATQAFVQGCCSNPSSNMPELSDTTTPKPIGTLAACRRNFIESTDSFFFPNAQFTNHESLPSLKDSFTQFKKAFPQFSETNKVDLIRATEYNHLSQSNHVCLDYLGIGLFSHSQTIPD--------CSSSSPP-----PQSSDFPFFRTLYKSVNLKTQLLHGDDGSELESAIKRRIMNFLNISENDYCMVFTTNRSSAFKLVAESYPFRASRKLLTVYDYESEAVEGMINTSEKRGAEVISAEFKWPRFRIHSEKLRKMLVGKKKKKKHRGLFVFPLQSRITGTTYSFQWMRTAQENGWHVLLDACALGPKDMNSFGLSLLHPDFLVCSFYKVYGENPTGFGCLFVKKSIIPILEDSTSTGMVNIVPSDMLFRSFASSPVTDTELEQASRMGRDEAGVMNHSSLLDNTSLQTKVPARIKAKKLFEIGSSKISGNANGKSKEVSKSVLLTVQEKPNLGENEC--------LEIKCRGLDHVDSLGLVQISNRMRCLINWLISALIKLQYPHTENKISLVRIYGPKVKFDRGPALAFNVYDWKGEKVEPVLVQKLADRSNISLSNGFLHQIWFSDNYEEEKDRFLESRCEEKER----GKHKKTCNGITVVTAAFGFLANFEDAYRLWSFIARFLDADFVEKERWRYTALNQKTVEV 639
+ SP L+EATQ +Q CC +P NMP +T + T AACRR+F E+T + FPN FTNHESLPSLK+SFT+F KA+P + +T +VD IRA EY HL+QSNH CLDY+GIGLFS+SQ SSS+PP P+S DFPFF YK+ +LKTQLLHG SELESAIK+RIM FLNISE+DY +VFT NR+SAFKL+A+SYPF+ SRKLLTVYDYESEAVE M + SEKRGA+V+SAEF WPR RIHS KL+KM+V KKKKKK RGLFVFPL SR+TG Y + WM AQENGWHVL+DACALGPKDM+SFGLSL PDFL+CSFYKV+GENP+GFGCLFVKKS+I ILE +TS+GMVNIVP L S TDT+LEQ S+ +E + + SS S QT ++ E G S NA + +E S + + + +++C LE++CR LD VDSLGL+ I+NR R LINWL+++++KL++P+ E+ I LVRIYGPK+KFDRGPALAFN+YDWKGEKVEPVLVQKLADRS+ISL+ GFLH I+FSD Y EEK R LE R +R G K+ GITVVTAA GFLANFEDAYRLW+F+A+FLDADFVEKERWRYTALNQKTVEV
Sbjct: 1 MQSPCLKEATQVCLQKCCPSPFLNMPGPKNTESR---STSAACRRDFAETTSASIFPNTHFTNHESLPSLKESFTEFTKAYPNYCDTEQVDHIRAHEYYHLTQSNHTCLDYIGIGLFSYSQLQKQDFSKNQHASSSSTPPLLTSPPRSLDFPFFSISYKTGSLKTQLLHGGQESELESAIKKRIMGFLNISESDYSLVFTANRTSAFKLLADSYPFKTSRKLLTVYDYESEAVESMNHYSEKRGAQVMSAEFSWPRLRIHSSKLKKMIVSKKKKKKKRGLFVFPLHSRVTGARYPYLWMSVAQENGWHVLIDACALGPKDMDSFGLSLFQPDFLICSFYKVFGENPSGFGCLFVKKSVISILEAATSSGMVNIVPPKELLHLGGDSSGTDTDLEQTSKFALEEVELASSSSFSGPISNQTSHTPKV------EQGESSDFLNAAARVEEPETSEIGKSEIQAAKTQHQCAKASRNGNLEVECRSLDQVDSLGLILIANRSRYLINWLVNSMLKLKHPN-EDGIRLVRIYGPKIKFDRGPALAFNIYDWKGEKVEPVLVQKLADRSSISLTYGFLHHIYFSDKYAEEKGRVLEKRESGAKRTVSNGLKNKSDLGITVVTAALGFLANFEDAYRLWAFVAQFLDADFVEKERWRYTALNQKTVEV 653
| Match Name | Stats | Description |
|---|---|---|
| A0A834H8Y5 | E-Value: 0.000e+0, PID: 62.91 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7147... [more] |
| A0A5J5AV53 | E-Value: 0.000e+0, PID: 63.64 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8533... [more] |
| A0A5J5B9P9 | E-Value: 0.000e+0, PID: 65.42 | HMG_CoA_synt_C domain-containing protein {ECO:0000... [more] |
| A0A7J0GXG7 | E-Value: 0.000e+0, PID: 63.83 | (Pyridoxal phosphate (PLP)-dependent transferases ... [more] |
| A0A6A4M689 | E-Value: 0.000e+0, PID: 62.44 | Aminotran_5 domain-containing protein {ECO:0000259... [more] |
| F6HP79 | E-Value: 0.000e+0, PID: 61.70 | (Uncharacterized protein {ECO:0000313|EMBL:CCB5648... [more] |
| A0A6P5YB38 | E-Value: 0.000e+0, PID: 60.79 | (molybdenum cofactor sulfurase-like {ECO:0000313|R... [more] |
| A0A2R6RT04 | E-Value: 0.000e+0, PID: 61.88 | (Molybdenum cofactor sulfurase {ECO:0000313|EMBL:P... [more] |
| A0A4S4ETE8 | E-Value: 0.000e+0, PID: 63.69 | (Uncharacterized protein {ECO:0000313|EMBL:THG1982... [more] |
| A0A6P3ZHE6 | E-Value: 0.000e+0, PID: 61.39 | (uncharacterized protein LOC107414461 {ECO:0000313... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |