Resource Type:
Polypeptide
Name:
DCAR_011445
Identifier:
DCAR_011445.mRNA-protein
Sequence:
MATPSSLSTSLLKPDLLFRGSSNSRKLRFVKDSNRAYKSSLRVKIRAVKS
EEAVIEGVGLNGNGSYKYNGNGNGNGSLVKYVNGNGGVGSNGEVPKQKKK
KSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFV
LTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKI
GQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIF
DHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIA
EYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKD
MDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAV
ESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREG
LLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERL
AAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFR
FPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEDF
KKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQ
RVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLI
GLLKVKKFDQREMLITGTA*
Sequence Length:
720
Sequence Checksum:
b752b92f77e9cd01885ce042241fd1fd
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_011445, derives from mRNA, DCAR_011445. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_011445 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_011445 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZTJ6 (ABC1 domain-containing protein {ECO:0000259|Pfam:PF03109})
HSP 1 Score: 1186.02 bits (3067), Expect = 0.000e+0
Identity = 602/769 (78.28%), Postives = 649/769 (84.40%), Query Frame = 0
Match: A0A5B6ZTJ6 (ABC1 domain-containing protein {ECO:0000259|Pfam:PF03109})
HSP 1 Score: 1186.02 bits (3067), Expect = 0.000e+0
Identity = 602/769 (78.28%), Postives = 649/769 (84.40%), Query Frame = 0
Query: 1 MATPSSLSTSLLKPDLLFRGSSNSRKLRFVKDSNRAYKS--------SLRVKIRAVKSEEAVIE-----------GVGLNGNG-----SYKYNG----------------NGNGNGSLVKYVNGNG-GVGSNGEVPKQK-----KKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVE----DFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 719
MAT S S P+L F +RK R + SLR +IRAV+ +E V+E G LNGNG SY YNG NG NGSLVKYVNGNG +G V + K KKK++EEIGQE+AWFK++ Q +VSV PGGRWSRFKTYSTIQRTLEIWGFVLTF+F+VWL+NQKFSYRGGMTE KKVQRRK LAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPS+TA++I+EEELG P+ DIF+ F+YEPIAAASLGQVHRAKLKG++VV KVQRPGLKDLFDIDLKNLRVIAEYLQK DPKSDGAKRDWVAIYDECA+VLYQEIDYTKEAANAELFASNFKDMDYVKVP I+W+YTTPQVLTMEYVPGIKINRIQALDQLGVDR+RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS+NIREGLLE FYGVYEKDP+KVL AM+QMGVLVPTGDMTAVRRTAQFFL SFEERL AQRKERE+AT ELGFKKPL+KEE+IEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELL+FREAGVE D +K+WDRQS AFYNLFRQADRVEKLA+ I+RLEQGDLKLRVR LESERAFQRVA VQKTIGSAVAAGSLINLATIL++N IR PATVAY F A+FG QVL G+LKVKKFDQ+E LITGTA
Sbjct: 1 MATASLFSL----PELTFLLPDATRKHRVSLSKLSLSRLNSHPKSNLSLRNRIRAVQKDEIVVEEGGRELISEVNGTELNGNGYSNGKSYGYNGSVERYSNGGVGVIENENGASNGSLVKYVNGNGVALGIEEGVSESKFEEIGKKKTIEEIGQEEAWFKQSREEQIEVSVAPGGRWSRFKTYSTIQRTLEIWGFVLTFIFKVWLNNQKFSYRGGMTEKKKVQRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSDTAVAIVEEELGAPLHDIFERFNYEPIAAASLGQVHRAKLKGQDVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKFDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKDMDYVKVPAIFWDYTTPQVLTMEYVPGIKINRIQALDQLGVDRQRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISRNIREGLLETFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLVAQRKEREMATTELGFKKPLTKEERIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVIVKDLRKRWDRQSSAFYNLFRQADRVEKLAEIIQRLEQGDLKLRVRTLESERAFQRVAAVQKTIGSAVAAGSLINLATILYLNSIRMPATVAYIFFAFFGFQVLFGILKVKKFDQQERLITGTA 765
BLAST of DCAR_011445 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9UNF7 ((uncharacterized protein LOC105178999 {ECO:0000313|RefSeq:XP_011100883.1}))
HSP 1 Score: 1183.7 bits (3061), Expect = 0.000e+0
Identity = 606/758 (79.95%), Postives = 657/758 (86.68%), Query Frame = 0
Match: A0A6I9UNF7 ((uncharacterized protein LOC105178999 {ECO:0000313|RefSeq:XP_011100883.1}))
HSP 1 Score: 1183.7 bits (3061), Expect = 0.000e+0
Identity = 606/758 (79.95%), Postives = 657/758 (86.68%), Query Frame = 0
Query: 2 ATPSSLSTSLLKPDLLF---RGSSNSRKLRFVKDSNRAYKSSLRV---KIRAVKSEEAV-------------IEGVGLNGNGSYKYNGNGN-----GNGSLVKYVNGNGGVGSNGEVPKQK------------KKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVE----DFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 719
A+ ++ ST+ P+L+F + KL + N +S++RV +IRAV+ EE+ + G +NGNGS + NG+ GNGSLVKYVNGNG +NG V + +KKS+EEIGQE+AWFK+N Q +VSV PGGRWSRFKTYSTIQRTLEIWGFVL+F+F+ WL+NQKFSYRGGMTE KK QRRKVLAKWLKE+ILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETA+SI+EEELGGPV+DIF+ F EPIAAASLGQVHRAKLKG+EVV KVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECA+VLYQEIDYTKEAANAE FA NFKDMDYVKVPTI WEYTTPQVLTMEYVPGIKINRI+ALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS NIREGLLEVFYGVYEKD KVL AMVQMGVLVPTGDMTAVRRTAQFFL SFEERLAAQR+ERE+ATAELGFKKPL+KEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELL+FREAGVE DF+K+WDRQSQAFYNLFRQADRVEKLAQTI+RLEQGDLKLRVRALESERAFQRVA VQ TIGSAVAAGSLINLATIL++N I+ PAT+AYF CAYFGL+VLIG++KVKKFDQRE LITGTA
Sbjct: 3 ASFAASSTTPTLPELIFLSPHSPAKRLKLSLYRPHNLERRSNIRVLGTRIRAVQREESSTVLDERDRELVTKLNG-SVNGNGSVANHTNGSVKVESGNGSLVKYVNGNGN--ANGSVASRSELEVVEVEEVISQKKSIEEIGQEEAWFKKNGEDQVEVSVAPGGRWSRFKTYSTIQRTLEIWGFVLSFIFKAWLNNQKFSYRGGMTEEKKSQRRKVLAKWLKENILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAVSIVEEELGGPVNDIFERFDREPIAAASLGQVHRAKLKGQEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAEQFADNFKDMDYVKVPTILWEYTTPQVLTMEYVPGIKINRIKALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEVFYGVYEKDAEKVLQAMVQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREREMATAELGFKKPLTKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVIIKDFRKRWDRQSQAFYNLFRQADRVEKLAQTIQRLEQGDLKLRVRALESERAFQRVAAVQNTIGSAVAAGSLINLATILYLNSIQMPATIAYFLCAYFGLKVLIGIVKVKKFDQRERLITGTA 757
BLAST of DCAR_011445 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A200QT79 ((UbiB domain {ECO:0000313|EMBL:OVA13665.1}))
HSP 1 Score: 1181.01 bits (3054), Expect = 0.000e+0
Identity = 600/759 (79.05%), Postives = 647/759 (85.24%), Query Frame = 0
Match: A0A200QT79 ((UbiB domain {ECO:0000313|EMBL:OVA13665.1}))
HSP 1 Score: 1181.01 bits (3054), Expect = 0.000e+0
Identity = 600/759 (79.05%), Postives = 647/759 (85.24%), Query Frame = 0
Query: 1 MATPSSLSTSLLKPDLLFRGSSNSRKLR-----FVKDSNRAYKSSLRVKIRAVKSEEAVI---------EGVGLNGNG--SYKYNG-------------NGNG--NGSLVKYVNGNGG----VGSNGEVPKQK-KKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVE----DFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 719
MAT + STS L P+LLF +LR F ++R+ KS R+++ A + E AV+ GV LNGNG Y YNG NGNG NGSLVKYVNGNG V N K+ +K +VEEIGQE+AWFK + +VSVTPGGRW++FKTYSTIQRTLEIWGFVLTF+F+ WL+NQKFSYRGGMTE KK RRK LAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETA+SI++EELG PVDDIFD F YEPIAAASLG+VHRA+LK +EVV KVQRPGLKDLFDIDLKNLRVIAEYLQK+DPKSDGAKRDWVAIYDECA VLYQEIDYT+EAANAELFA+NFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRI+ALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS NIREGLLE FYGVYEKDP+KVL AMVQMGVLVPTGD+TAVRRTAQFFL SFEERLAAQRKERE+AT ELGFKKPL+KEE+ EKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDP FDITEIAKPYALELL+FREAGVE DFKK+WDRQSQAFYNLFRQADRVEKLA+ I+RLEQGDLKLRVRALESERAF RVA VQKT+GSAVAAGSLINLATIL++N IR PA Y FCA+F +QVL GLLKVKK DQ+E LITGTA
Sbjct: 1 MATSLAASTSTL-PELLFLRPDTRSRLRIPLSRFQSLNSRSSKSVFRIRLGAAREEGAVVVKEEEREEVNGVYLNGNGRSGYGYNGLNGSSNGSATVILNGNGVSNGSLVKYVNGNGSATKVVEENSASKKEGGRKMNVEEIGQEEAWFKRGGRDKLEVSVTPGGRWNKFKTYSTIQRTLEIWGFVLTFLFKAWLNNQKFSYRGGMTEEKKTLRRKTLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAVSIIQEELGAPVDDIFDRFEYEPIAAASLGKVHRARLKNQEVVIKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECATVLYQEIDYTQEAANAELFANNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIKALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGVYEKDPDKVLQAMVQMGVLVPTGDLTAVRRTAQFFLNSFEERLAAQRKEREIATTELGFKKPLTKEERTEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPLFDITEIAKPYALELLRFREAGVEVIVKDFKKRWDRQSQAFYNLFRQADRVEKLAEVIQRLEQGDLKLRVRALESERAFVRVAAVQKTVGSAVAAGSLINLATILYLNSIRVPAIAGYVFCAFFSMQVLFGLLKVKKLDQQERLITGTA 758
BLAST of DCAR_011445 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZRU0 (ABC1 domain-containing protein {ECO:0000259|Pfam:PF03109} (Fragment))
HSP 1 Score: 1176 bits (3041), Expect = 0.000e+0
Identity = 593/758 (78.23%), Postives = 646/758 (85.22%), Query Frame = 0
Match: A0A5B6ZRU0 (ABC1 domain-containing protein {ECO:0000259|Pfam:PF03109} (Fragment))
HSP 1 Score: 1176 bits (3041), Expect = 0.000e+0
Identity = 593/758 (78.23%), Postives = 646/758 (85.22%), Query Frame = 0
Query: 1 MATPSSLSTSLLKPDLLFRGSSNSRKLRF------VKDSNRAYKSSL--RVKIRAVKSEEAVIE-------------GVGLNGNGSYKYNG--------NGNGNGSLVKYVNGNG------GVGSNGEVPKQKKKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVE----DFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 719
MAT +SLST P+L F +RKLR + N KS+L R ++RAV+ EE V+E G NG+ NG NG NGSL KYVNGNG G S + + +KKK++EEIGQE+AWFK + Q +VSV PGGRWSRFKTYSTIQRTLEIWGFVLTF+F+ WL+N+KFSY+GGMTE KK QRRK LAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPS+TA++I+EEELG P+ DIF+ F+YEPIAAASLGQVHRAKLKG++VV KVQRPGLKDLFDIDLKNLRVIAEYLQK DPKSDGAKRDWVAIYDECA+VLYQEIDYTKEAANAELFASNFKDMDYVKVP I+W+YTTPQVLTMEYVPGIKINRIQALDQLGVDR+RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS+NIREGLLE FYGVYEKDP+KVL AM+QMGVLVPTGDMTAVRRTAQFFL SFEERL AQRKERE+AT ELGFKKPL+KEE+IEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELL+FREAGVE D +K+WDRQS AFYNLFRQADRVEKLA+ I+RLEQGDLKLRVR LESERAF+RVA VQKTIGSAVAAGSLINLATIL +N IR PAT+AY FCA+FG QVL G+LKVKK DQ+E LITGTA
Sbjct: 50 MAT-ASLSTL---PELTFLRPDTTRKLRVSLSRLSLSGINSHPKSNLLLRHRLRAVQKEEIVVEESDSELISEVNGKSYGYNGSAKTYSNGAVGVIESENGASNGSLAKYVNGNGVALEIPGGISESKSEETEKKKTIEEIGQEEAWFKRSGQDQVEVSVVPGGRWSRFKTYSTIQRTLEIWGFVLTFIFKAWLNNKKFSYKGGMTEEKKGQRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSDTAVAIVEEELGAPLHDIFERFNYEPIAAASLGQVHRAKLKGQDVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKFDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKDMDYVKVPAIFWDYTTPQVLTMEYVPGIKINRIQALDQLGVDRQRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISRNIREGLLETFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLVAQRKEREMATTELGFKKPLTKEERIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVIVKDLRKRWDRQSSAFYNLFRQADRVEKLAEIIQRLEQGDLKLRVRTLESERAFKRVAAVQKTIGSAVAAGSLINLATILFLNSIRMPATLAYIFCAFFGFQVLFGVLKVKKLDQQERLITGTA 803
BLAST of DCAR_011445 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N5GW18 ((AarF domain-containing protein kinase {ECO:0000313|EMBL:KAB2617340.1}))
HSP 1 Score: 1162.52 bits (3006), Expect = 0.000e+0
Identity = 577/717 (80.47%), Postives = 628/717 (87.59%), Query Frame = 0
Match: A0A5N5GW18 ((AarF domain-containing protein kinase {ECO:0000313|EMBL:KAB2617340.1}))
HSP 1 Score: 1162.52 bits (3006), Expect = 0.000e+0
Identity = 577/717 (80.47%), Postives = 628/717 (87.59%), Query Frame = 0
Query: 38 KSSLRVKIRAVKSEEAVIE-------GVGLNGNGS--------YKYNG----------NGNGNGSLVKYVNGNGGVGS--NG----EVPKQKKKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVE----DFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 719
+ +R +IRA K + V+E GV L GNG+ Y NG NG NGSLVK+VNGNG G E ++ ++K++EEIG+EDAWFK++ + +VSV PGGRWSRFKTYSTIQRTLEIWGFVL F+ + WLDNQKF+YRGGMTE KK RRK LAKWLKE+ILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPS+TAISI+EEELG PV DIFD F YEPIAAASLGQVHRA+LKG+EVV KVQRPGLKDLF+IDLKNLRVIAEYLQK+DPKSDGAKRDWVAIYDECANVLY+EIDYTKEAANAELFASNFK+MDYVKVP I WEYTTPQVLTMEYVPGIKIN+IQA+DQLG+DR+RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSIS NIREGLLE FYGVYEKDP+KVL AM+QMGVLVPTGDMTAVRRTA FFL SFEERLAAQRKE+ELATAELGFKKPLSKEE+I KKK+RLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVE D + +WDRQS+AFYNLFRQADRVEKLA+ I+RLEQGDLKLRVRALESER+FQRVATVQKT+G+AVAAGSLINLATIL+IN IR PA VAY FCA+FGLQVLIGL+KVKKFD+RE LITGTA
Sbjct: 41 RGGVRSRIRATKEDGLVVEETINKVNGVELGGNGAAASTSGSDYGSNGSVNSYSNGSANGASNGSLVKFVNGNGVAAEVVEGVQVLETKEEGRRKNIEEIGKEDAWFKQSGLPKVEVSVAPGGRWSRFKTYSTIQRTLEIWGFVLKFIIKAWLDNQKFTYRGGMTEEKKTLRRKALAKWLKENILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSDTAISIVEEELGAPVGDIFDRFDYEPIAAASLGQVHRARLKGQEVVVKVQRPGLKDLFNIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECANVLYEEIDYTKEAANAELFASNFKNMDYVKVPMIIWEYTTPQVLTMEYVPGIKINKIQAIDQLGLDRQRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTALFFLNSFEERLAAQRKEKELATAELGFKKPLSKEERIMKKKERLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDLRNRWDRQSRAFYNLFRQADRVEKLAEIIQRLEQGDLKLRVRALESERSFQRVATVQKTVGNAVAAGSLINLATILYINSIRVPAIVAYVFCAFFGLQVLIGLIKVKKFDERERLITGTA 757
BLAST of DCAR_011445 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3S3P6A1 ((UbiB domain-containing protein {ECO:0000313|EMBL:RWR84048.1}))
HSP 1 Score: 1161.75 bits (3004), Expect = 0.000e+0
Identity = 583/744 (78.36%), Postives = 635/744 (85.35%), Query Frame = 0
Match: A0A3S3P6A1 ((UbiB domain-containing protein {ECO:0000313|EMBL:RWR84048.1}))
HSP 1 Score: 1161.75 bits (3004), Expect = 0.000e+0
Identity = 583/744 (78.36%), Postives = 635/744 (85.35%), Query Frame = 0
Query: 1 MATPSSLSTSL-----LKPDLLFRGSSNSRKLRFVKDSNRAYKSSLRVKIRAVKSEEAVIEGVGLNGNGS-YKY---------------NGNGNGNGSLVKYVNGNGGVGSNGEVPKQKKKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVE----DFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 719
MA P + +T L P L F+ + S + RF SNR S+ ++R +S V++ NGNGS + Y NGNG NGSLVKYVNGNG EV K+KK+VEEIGQEDAWFK+ + +VSVTPGGRW+RFKTYSTIQRTLEIWGFV+TF+F+ WL+NQKFSY+GGMTE KK RRK LAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETA+SI++EELG +DDIFD F YEPIAAASLGQVHRAKLKG EVV KVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEA NAELFA NFK DYVKVPTIYW+YTTPQVLTMEYVPGIKINRI+ALDQLGVDR+RLGRYAVESYLEQILSHGFFHADPHPGNIAVDD NGGRLIFYDFGMMGSIS NIREGLLE FYGVYEKDP+KVL AM+QMGVLVPTGDMTAVRRTAQFFL SFEERL AQRKERE+ATA LGFKKPLSKEE+ EKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYA+ELL+FREAGVE DFKK+W+RQS+AFYNLFRQADRVE+LA+ I+RLEQGDLKLRVRALESERAF+RVA VQKT+G+AVAAGSLINLATI ++N IR PA AY CA+F +Q+L G+LKVKK DQ+E LITGTA
Sbjct: 1 MAAPLAAATQLPFLLPRTPLLRFQFQNRSCR-RFRTGSNRIRISA--AQVREEESSSNVMDDYNWNGNGSGFGYSGSVEASNGSLKGFLNGNGASNGSLVKYVNGNGAAKMPEEV---KRKKTVEEIGQEDAWFKQGGKEKIEVSVTPGGRWNRFKTYSTIQRTLEIWGFVITFIFKAWLNNQKFSYKGGMTEKKKALRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAVSIIKEELGASLDDIFDRFDYEPIAAASLGQVHRAKLKGEEVVIKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAENAELFAENFKGFDYVKVPTIYWDYTTPQVLTMEYVPGIKINRIRALDQLGVDRQRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDFNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLVAQRKEREMATAALGFKKPLSKEERNEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYAMELLRFREAGVEVIVKDFKKRWERQSRAFYNLFRQADRVERLAEIIQRLEQGDLKLRVRALESERAFKRVAAVQKTVGNAVAAGSLINLATIFYLNSIRVPAMAAYTLCAFFSIQILFGILKVKKLDQQERLITGTA 738
BLAST of DCAR_011445 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4PMM0 ((Putative cadmium-transporting ATPase {ECO:0000313|EMBL:KAE9602815.1}))
HSP 1 Score: 1160.21 bits (3000), Expect = 0.000e+0
Identity = 577/742 (77.76%), Postives = 632/742 (85.18%), Query Frame = 0
Match: A0A6A4PMM0 ((Putative cadmium-transporting ATPase {ECO:0000313|EMBL:KAE9602815.1}))
HSP 1 Score: 1160.21 bits (3000), Expect = 0.000e+0
Identity = 577/742 (77.76%), Postives = 632/742 (85.18%), Query Frame = 0
Query: 8 STSLLKPDLLFRGSSNS----------RKLRFVKDSNRAYKSSLRVKIRA--------VKSEEAVIEGVGLNGNGSYKY---NGNGNGNGSLVKYVNGNGGVGSN---------GEVPKQKKKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEDFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 719
S+S+ PDL F + R ++ +R Y +LR +IRA VK E + G + NGS + NGNGS+VK+VNG+G S G+ + +KK VEEIG+EDAWFK++ SQ +V+ PGGRWSRFKTYSTIQRTLEIWGFV+TF+F+ WL+NQKFSYRGGMTE KK RRK LAKWLKESILRLGPTFIKIGQQFSTRVDIL QEYVDQLSELQDQVPPFPSETAI+I+EEELG P+D IFD F YEPIAAASLGQVHRAKLKG++VV KVQRPGLK LFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECA+VLYQEIDYTKEAANAELF SNFK+MDYVKVPTI W+YTTPQ+LTMEYVPGIKIN+IQALDQLGVDR RL RYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLE FYGVYEKDP+KVL +M+QMGVLVPTGDMTAVRRTAQFFL +FEERLAAQR+ERELA AE+GFKKPLSK+EKI KKK+RLAAIGEDLL+IAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEDF K+ DRQSQAFYNLFRQADRVEKLA I+RLEQGDLKLRVR LESERAFQRVATVQKTI +AV AGSLINLATIL++N I GPAT+AYFFCA FGLQVLIG++K+KK D+RE LITGTA
Sbjct: 3 SSSITLPDLKFLAPQFTLKHGVSLIKFRSCNYISRKSRYYNDTLRTRIRALIEERVSDVKWSENGVIGSDDSVNGSNRLVVKESENNGNGSVVKHVNGDGVAASKEVVEDFVEGGKRKEDGRKKRVEEIGKEDAWFKQSGKSQVEVAAVPGGRWSRFKTYSTIQRTLEIWGFVITFIFKAWLNNQKFSYRGGMTEEKKTLRRKTLAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETAIAIVEEELGSPLDGIFDQFDYEPIAAASLGQVHRAKLKGQDVVVKVQRPGLKGLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFKSNFKNMDYVKVPTILWDYTTPQILTMEYVPGIKINKIQALDQLGVDRTRLSRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLETFYGVYEKDPDKVLQSMIQMGVLVPTGDMTAVRRTAQFFLNTFEERLAAQRRERELAKAEIGFKKPLSKDEKIMKKKERLAAIGEDLLSIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEDFIKRRDRQSQAFYNLFRQADRVEKLADIIQRLEQGDLKLRVRTLESERAFQRVATVQKTIVNAVGAGSLINLATILYLNSISGPATIAYFFCAIFGLQVLIGIVKIKKLDERERLITGTA 744
BLAST of DCAR_011445 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: G7LB96 ((ABC transporter-like protein {ECO:0000313|EMBL:AET04576.1}) (Putative cadmium-transporting ATPase {ECO:0000313|EMBL:RHN42985.1}) (3.6.3.46 {ECO:0000313|EMBL:RHN42985.1}))
HSP 1 Score: 1159.44 bits (2998), Expect = 0.000e+0
Identity = 572/703 (81.37%), Postives = 624/703 (88.76%), Query Frame = 0
Match: G7LB96 ((ABC transporter-like protein {ECO:0000313|EMBL:AET04576.1}) (Putative cadmium-transporting ATPase {ECO:0000313|EMBL:RHN42985.1}) (3.6.3.46 {ECO:0000313|EMBL:RHN42985.1}))
HSP 1 Score: 1159.44 bits (2998), Expect = 0.000e+0
Identity = 572/703 (81.37%), Postives = 624/703 (88.76%), Query Frame = 0
Query: 41 LRVKIRAVKSEEAVIE------------GVGLNG-NGSYKYNGNGNGNGSLVKYVNGNGG----VGSNGEVPKQK---KKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVE----DFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 719
L +IRA+K E A++E G +NG NGS + NG GNGSLVKYVNGNG V E K+K +KK +EEIG+EDAWFK+N Q +V+V PGGRWSRFKTYSTIQRTLEIWGFV+ F+F+ WL+ QKFSY+GGMTE KK RRK LAKWLKESILRLGPTFIKIGQQFSTRVDIL QEYVDQLSELQDQVPPFPSETA++I+EEELG P+ IFD F YEPIAAASLGQVHRA+L+G+EVV KVQRPGLKDLFDIDLKNLRVIAEYLQK+DPKSDGAKRDWVAIYDECA+VLYQEIDYTKEAANAELFASNFK+MDYVKVP+IYW+YTTPQ+LTMEYVPGIKIN+IQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLE FYGVYEK P+KVLDAM+QMGVLVPTGDMTAVRRTAQFFL SFEERLAAQR+E+E+ AE+GFKKPLSKEE++ KKK+RLAAIGEDLL+IAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVE D KK+WDRQSQAFYNLFRQADRVEKLA IERLEQGDLKLRVRALESERAFQR+ATVQKTIG+AV AGSLINLATIL +N IR PAT+AYFFCA FG QVL+G++K+KK D+RE LITGTA
Sbjct: 33 LPTQIRALKEEGALVEERIVSDVKWSGNGTVVNGSNGSVRGYVNGGGNGSLVKYVNGNGVAVEVVEDFVETSKRKEVGRKKRLEEIGKEDAWFKQNGEPQVEVAVAPGGRWSRFKTYSTIQRTLEIWGFVIQFIFKSWLNRQKFSYKGGMTEEKKTLRRKTLAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSETAMAIVEEELGAPIAGIFDQFDYEPIAAASLGQVHRARLRGQEVVIKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKNMDYVKVPSIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEAFYGVYEKSPDKVLDAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREKEMEAAEVGFKKPLSKEEQVMKKKERLAAIGEDLLSIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVIIKDIKKRWDRQSQAFYNLFRQADRVEKLANVIERLEQGDLKLRVRALESERAFQRIATVQKTIGNAVGAGSLINLATILSLNSIRVPATIAYFFCAIFGFQVLLGIVKIKKLDERERLITGTA 735
BLAST of DCAR_011445 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4H1V3 ((protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic-like {ECO:0000313|RefSeq:XP_018850122.1}))
HSP 1 Score: 1158.67 bits (2996), Expect = 0.000e+0
Identity = 580/754 (76.92%), Postives = 638/754 (84.62%), Query Frame = 0
Match: A0A2I4H1V3 ((protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic-like {ECO:0000313|RefSeq:XP_018850122.1}))
HSP 1 Score: 1158.67 bits (2996), Expect = 0.000e+0
Identity = 580/754 (76.92%), Postives = 638/754 (84.62%), Query Frame = 0
Query: 7 LSTSLLKPDLLFRGSSNSRKLRFVKDS-----NRAYKSSLRVKIRAVKSEEAVIEGVGL-------NGNG-------------SYKYNGNGN------GNGSLVKYVNGNGG-----VGSNGEVPKQK-KKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVE----DFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 719
++ SL P+L+F ++ K R N + S R +IRAV E ++E NGNG S ++ NG+ NGSLVKYVNGNG V V K+ +K+ +EEIG+EDAWFK + +VSV PGGRWSRFKTYSTIQRTLEIWGFVLTF+F+ WL+N+KFSYRGG+TE KK RRK LAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETA+SI+EEELG P+ DIFD F YEPIAAASLGQVHRA+LKG+EVV KVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECA+VLYQEIDYTKEAANAELFASNFK+MDYVKVP+IYWEYTTPQVLTMEYVPGIKIN+IQALDQLGVDR+RLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLE FYGVYEKDP+KVL AM+QMGVLVPTGDMTAVRRTAQFFL SFEERLAAQRKERELAT E GFKKPLSK+E++ KKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYA+ELL+F+EAGVE DF+K+WDRQS+AFYNLFRQADRVEKLA+ I+RLEQGDLKLRVR LESERAFQRVA VQ+T+G+AVAAGSLINLATIL+ N IR PAT+AY FCA+FG QVL G++KVKK D+RE L+TGTA
Sbjct: 1 MAASLTLPELIFLSPQSTPKHRLFLSHMSVSRNLRCRPSFRNRIRAVSEEGLLVEERERQLIKELKNGNGAASAATGDTRYGVSTEWYSNGSVGVSERENGSLVKYVNGNGVAAAELVEEEDTVSKEDGRKRRIEEIGKEDAWFKGSGKESIEVSVAPGGRWSRFKTYSTIQRTLEIWGFVLTFIFKAWLNNKKFSYRGGITEEKKALRRKALAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAMSIVEEELGAPLSDIFDQFEYEPIAAASLGQVHRARLKGQEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKNMDYVKVPSIYWEYTTPQVLTMEYVPGIKINKIQALDQLGVDRQRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLETFYGVYEKDPDKVLQAMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRKERELATMEPGFKKPLSKDERVMKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYAMELLRFKEAGVEVILKDFRKRWDRQSRAFYNLFRQADRVEKLAEIIQRLEQGDLKLRVRTLESERAFQRVAAVQRTVGNAVAAGSLINLATILYFNSIRVPATIAYVFCAFFGFQVLFGIIKVKKLDERERLVTGTA 754
BLAST of DCAR_011445 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4D8YVM3 ((Ubiquinone biosynthesis protein {ECO:0000313|EMBL:TEY22478.1}))
HSP 1 Score: 1158.28 bits (2995), Expect = 0.000e+0
Identity = 585/769 (76.07%), Postives = 641/769 (83.36%), Query Frame = 0
Match: A0A4D8YVM3 ((Ubiquinone biosynthesis protein {ECO:0000313|EMBL:TEY22478.1}))
HSP 1 Score: 1158.28 bits (2995), Expect = 0.000e+0
Identity = 585/769 (76.07%), Postives = 641/769 (83.36%), Query Frame = 0
Query: 1 MATPSSLSTSLLKPDLLFRGSSNSRKLRFVKDSNRAYKSSLRV--KIRAVKSEEAVIEGVGLNGNGSYKYNGNGNGNGSLVKYVNGNGGVGS-----------NGEVPKQ---------------------------KKKKSVEEIGQEDAWFKENNPSQPQVSVTPGGRWSRFKTYSTIQRTLEIWGFVLTFVFRVWLDNQKFSYRGGMTEPKKVQRRKVLAKWLKESILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAISILEEELGGPVDDIFDHFSYEPIAAASLGQVHRAKLKGREVVCKVQRPGLKDLFDIDLKNLRVIAEYLQKVDPKSDGAKRDWVAIYDECANVLYQEIDYTKEAANAELFASNFKDMDYVKVPTIYWEYTTPQVLTMEYVPGIKINRIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISQNIREGLLEVFYGVYEKDPNKVLDAMVQMGVLVPTGDMTAVRRTAQFFLVSFEERLAAQRKERELATAELGFKKPLSKEEKIEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVE----------DFKKKWDRQSQAFYNLFRQADRVEKLAQTIERLEQGDLKLRVRALESERAFQRVATVQKTIGSAVAAGSLINLATILHINLIRGPATVAYFFCAYFGLQVLIGLLKVKKFDQREMLITGTA 719
MAT S S++L P+L+F NS K + S +S+ ++ +IRA++ E++V+E + + K NG+ NGN Y + NG VGS NG + + +KKSVEEIGQE+AWFK+ Q +VSV PGGRWSRFKTYSTIQRTLEIWGFVLTF+FRVWL+NQKFSY+GGMTE K+VQRRKVLAKWLKE+ILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETA++I+EEELG PV+DIF+ F +EPIAAASLGQVHRA+LKG E+V KVQRPGLKDLFDIDLKNLRVIAEYLQK+DPKSDGAKRDWV+IYDECANVLYQEIDYTKEA+NAE FA+NFKDMDYVKVP+IYWEYTTPQVLTMEYVPGIKINR QALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDD NGGRLIFYDFGMMGSIS+NIREGLLEVFYGVYEKDP KVL AMVQMGVLVPTGDMTAVRRTAQFFL SFEERL AQRKERELA ELGFKKPLSKEE EKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVE DF+K+WDRQS A +NLFRQADRVEKLA+ I+RLEQGDLKLRVR LESERAFQRVATVQ TIGSA+AAGSL+NLATILH+N I+ PA +AY CAYF L+VLIGL+KVKKFDQRE LITGTA
Sbjct: 1 MATFSIFSSTL--PELIFLSPHNSTKRLKLFLSRAGPRSNAKILGRIRAIQREDSVLEA--RDRELAAKLNGSVNGN-----YSSRNGSVGSYGNESVKSESENGSLARYVNGNGNGNGSVGSGNAVLEAVEMEEVVSEKKSVEEIGQEEAWFKQGGGDQVEVSVAPGGRWSRFKTYSTIQRTLEIWGFVLTFIFRVWLNNQKFSYKGGMTEQKRVQRRKVLAKWLKENILRLGPTFIKIGQQFSTRVDILAQEYVDQLSELQDQVPPFPSETAVAIVEEELGAPVNDIFERFDHEPIAAASLGQVHRARLKGEELVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVSIYDECANVLYQEIDYTKEASNAEQFATNFKDMDYVKVPSIYWEYTTPQVLTMEYVPGIKINRTQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDFNGGRLIFYDFGMMGSISRNIREGLLEVFYGVYEKDPEKVLQAMVQMGVLVPTGDMTAVRRTAQFFLNSFEERLVAQRKERELAKQELGFKKPLSKEEASEKKKQRLAAIGEDLLAIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLKFREAGVEVVVKASFWNTDFRKRWDRQSSAVFNLFRQADRVEKLAEIIQRLEQGDLKLRVRTLESERAFQRVATVQNTIGSAIAAGSLVNLATILHLNSIQMPANIAYIICAYFSLKVLIGLVKVKKFDQRERLITGTA 760
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6ZTJ6 | E-Value: 0.000e+0, PID: 78.28 | ABC1 domain-containing protein {ECO:0000259|Pfam:P... [more] |
| A0A6I9UNF7 | E-Value: 0.000e+0, PID: 79.95 | (uncharacterized protein LOC105178999 {ECO:0000313... [more] |
| A0A200QT79 | E-Value: 0.000e+0, PID: 79.05 | (UbiB domain {ECO:0000313|EMBL:OVA13665.1})[more] |
| A0A5B6ZRU0 | E-Value: 0.000e+0, PID: 78.23 | ABC1 domain-containing protein {ECO:0000259|Pfam:P... [more] |
| A0A5N5GW18 | E-Value: 0.000e+0, PID: 80.47 | (AarF domain-containing protein kinase {ECO:000031... [more] |
| A0A3S3P6A1 | E-Value: 0.000e+0, PID: 78.36 | (UbiB domain-containing protein {ECO:0000313|EMBL:... [more] |
| A0A6A4PMM0 | E-Value: 0.000e+0, PID: 77.76 | (Putative cadmium-transporting ATPase {ECO:0000313... [more] |
| G7LB96 | E-Value: 0.000e+0, PID: 81.37 | (ABC transporter-like protein {ECO:0000313|EMBL:AE... [more] |
| A0A2I4H1V3 | E-Value: 0.000e+0, PID: 76.92 | (protein ACTIVITY OF BC1 COMPLEX KINASE 8, chlorop... [more] |
| A0A4D8YVM3 | E-Value: 0.000e+0, PID: 76.07 | (Ubiquinone biosynthesis protein {ECO:0000313|EMBL... [more] |
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| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |