Resource Type:
Polypeptide
Name:
DCAR_026419
Identifier:
DCAR_026419.mRNA-protein
Sequence:
MEAWVGVKSFLIFLKSFNNKLFRRYRDKSHHTPSIHPVECASCDCCGFTE
ECTQAYIHSIRQRYKGIWICGLCAEVVKYEMRMRNELQEDEALLLHTSFC
NKFKSSSPPSNPAVHLISAMRSILRRSLDSPTSLPNSPTRRGRGIRRNTD
YIANANNPVYTRWSSKPGLSGRTPVFRRQIVELGVNSSDAMDVTEPNNSS
VLDDLSCYNLFHHQGYGSSCDYLKAHPECSSPGFFDYVKFYYCDCGQSSF
AFIVFGVWLVALFYLLGNTAADYFCCSLEKLASLLKLSPTVAGVALLPLG
NGAPDVFASIAAFVGTDAGDVGLNSVLGGALFVTCVVAGAVSLCVADQGF
QIDHKCFIRDILFFMCTLMALLFILIVGKVSAWAAVAFVSIYLAYGFVVA
TNEILRKQVRRLKLDVVTPLLPVRGSIYSQSGLEDDSIYSSLLDIDSTAD
GDQSNASLPQWMWASNVAIYSNTLKAIDGDKPLWGWSDESYGTGNSFSFS
WSKLFALLEFPLIVPRRLTIPLVEEETWSKFYAVASAFLAPVLLAFLWNT
RDNATLQSTILGYVFGVSVGSTLGVLAYWNTRSDSPPQRFLVLWVLGGFC
MSIVWFYMIANELVALLQGVGVILGVKPTILGLTVLAWGNSMGDLVSNVA
LATNGGDGLQIALSGCYAGPMFNTLIGLGISMLLGAWTGETGSYTIPQDR
SLFYTMGFLVSGLTWALVVLPRNDMRPNRMLGAGLIAIYLIFLSIRMSNA
MGILPLFGLS*
Sequence Length:
761
Sequence Checksum:
928d03f7f261909c0bcddfb1585959ad
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_026419, derives from mRNA, DCAR_026419. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_026419 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_026419 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4LFQ1 ((Uncharacterized protein {ECO:0000313|EMBL:KAE9453348.1}) (Fragment))
HSP 1 Score: 814.298 bits (2102), Expect = 0.000e+0
Identity = 406/604 (67.22%), Postives = 489/604 (80.96%), Query Frame = 0
Match: A0A6A4LFQ1 ((Uncharacterized protein {ECO:0000313|EMBL:KAE9453348.1}) (Fragment))
HSP 1 Score: 814.298 bits (2102), Expect = 0.000e+0
Identity = 406/604 (67.22%), Postives = 489/604 (80.96%), Query Frame = 0
Query: 162 RWSSKPGL---SGRTPVFRRQIVELGVNSSDAMDVTEPNNSSVLDD-LSCYNLFHHQGYGSSCDYLKAHPECSSPGFFDYVKFYYCDCGQSSFAFIVFGVWLVALFYLLGNTAADYFCCSLEKLASLLKLSPTVAGVALLPLGNGAPDVFASIAAFVGTDAGDVGLNSVLGGALFVTCVVAGAVSLCVADQGFQIDHKCFIRDILFFMCTLMALLFILIVGKVSAWAAVAFVSIYLAYGFVVATNEILRKQVRRLKLDVVTPLLPVRGSIYSQSGLEDDSIYSSLLDIDSTADGDQSNASLPQWMWASNVAIYSN-TLKAIDGDKPLWGWSDESYGTGNSFSFSWSKLFALLEFPLIVPRRLTIPLVEEETWSKFYAVASAFLAPVLLAFLWNTRDNATLQSTILGYVFGVSVGSTLGVLAYWNTRSDSPPQRFLVLWVLGGFCMSIVWFYMIANELVALLQGVGVILGVKPTILGLTVLAWGNSMGDLVSNVALATNGGDGLQIALSGCYAGPMFNTLIGLGISMLLGAWTGETGSYTIPQDRSLFYTMGFLVSGLTWALVVLPRNDMRPNRMLGAGLIAIYLIFLSIRMSNAMGILPLFGLS 760
RWS G S + V R+++++G NSS+ +D N+S ++++ SC LF+H+G+ + C++LKAHP+CSS GFFDYVKF+YCDC ++ A+++ +WL ALFYLLGNTAADYFCCSLEKL+SLL+LSPTVAGV LLPLGNGAPDVFASIAAFVGT +G+VGLNSVLGGA+FVTC+V G VSLCVAD QID KCFIRDI FF+ TL++L IL VGK+S W A+AFVSIY+ Y F V NEIL K RRLKLD VTPLLPVRGS++SQ EDDS+YSSLL+ID+ D S++SLPQWMWASNVAI+SN LK DG++P+WGW D+ T +S SFS +KL +L+E PL VPR+LTIP+VEEETW K YAVASA LAP+LLAFLW+T+D+ QS + Y GVS+G LGVLAY TRSD PPQ+FL+ WVLGGF MSIVWFYMIANELVALL G+G+ILGV P+ILGLTVLAWGNSMGDLVSNVALATNGGDG+QIALSGCYAGPMFN LIGLG+S+LLGAW+ + Y +P+DRSL +TMGFL SGL WALVVLPRNDMRP++ LG GLIA+Y IFLS+R+ A G++ L GLS
Sbjct: 53 RWSWTGGSFVGSSNSVVVHRRMIDIGANSSNLVDXAGQNDSLIVNNPESCTGLFNHEGFATHCEFLKAHPQCSSXGFFDYVKFFYCDCNGNALAYVLLAIWLAALFYLLGNTAADYFCCSLEKLSSLLRLSPTVAGVTLLPLGNGAPDVFASIAAFVGTGSGEVGLNSVLGGAVFVTCIVVGTVSLCVADMDVQIDRKCFIRDIGFFVITLVSLSLILFVGKLSVWGAIAFVSIYVVYAFAVGANEILMKHARRLKLDAVTPLLPVRGSVFSQGNQEDDSVYSSLLEIDTERDRIHSHSSLPQWMWASNVAIFSNQALKGPDGERPVWGWMDDGIETEHS-SFSCAKLCSLMELPLTVPRQLTIPVVEEETWFKPYAVASASLAPLLLAFLWSTQDSVGSQSRKVAYFLGVSIGCALGVLAYRYTRSDRPPQKFLLPWVLGGFLMSIVWFYMIANELVALLVGLGMILGVNPSILGLTVLAWGNSMGDLVSNVALATNGGDGVQIALSGCYAGPMFNILIGLGVSLLLGAWSEKPRLYIVPEDRSLVFTMGFLFSGLIWALVVLPRNDMRPSKRLGIGLIALYFIFLSLRVIGATGLIQLSGLS 655
BLAST of DCAR_026419 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EPE2 ((Uncharacterized protein {ECO:0000313|EMBL:THG18154.1}))
HSP 1 Score: 809.675 bits (2090), Expect = 0.000e+0
Identity = 418/614 (68.08%), Postives = 495/614 (80.62%), Query Frame = 0
Match: A0A4S4EPE2 ((Uncharacterized protein {ECO:0000313|EMBL:THG18154.1}))
HSP 1 Score: 809.675 bits (2090), Expect = 0.000e+0
Identity = 418/614 (68.08%), Postives = 495/614 (80.62%), Query Frame = 0
Query: 156 NNPVYTRWSSKP--GLSGRTPVF-RRQIVELGVNSSDAMDVTEPNNSSVLDDLS-----CYNLFHHQGYGSSCDYLKAHPECSSPGFFDYVKFYYCDCGQSSFAFIVFGVWLVALFYLLGNTAADYFCCSLEKLASLLKLSPTVAGVALLPLGNGAPDVFASIAAFVGTDAGDVGLNSVLGGALFVTCVVAGAVSLCVADQGFQIDHKCFIRDILFFMCTLMALLFILIVGKVSAWAAVAFVSIYLAYGFVVATNEILRKQVRRLKLDVVTPLLPVRGSIYSQSGLEDDSIYSSLLDIDSTADGDQSNASLPQWMWASNVAIYSN-TLKAIDGDKPLWGWSDESYGTGNSFSFSWSKLFALLEFPLIVPRRLTIPLVEEETWSKFYAVASAFLAPVLLAFLWNTRDNATLQSTILGYVFGVSVGSTLGVLAYWNTRSDSPPQRFLVLWVLGGFCMSIVWFYMIANELVALLQGVGVILGVKPTILGLTVLAWGNSMGDLVSNVALATNGGDGLQIALSGCYAGPMFNTLIGLGISMLLGAWTGETGSYTIPQDRSLFYTMGFLVSGLTWALVVLPRNDMRPNRMLGAGLIAIYLIFLSIRMSNAMGILPLFGLS 760
NP+ + S++ G S + VF RRQ+VE+ VNSS+ +D ++ NN++ C LF+H + S C++LKAHP+CSS GFFDY F+YCDC +++FA+++ G+WL ALFYLLGNTAADYFCCSLEKL+SLL+LSPTVAGV LLPLGNGAPDVFASIAAF+GT GDVGLNSVLGGA+FVTCVV GAVSLCVA+Q +ID KCFIRDI FF+ TL++L IL VG VS A+AFV IY Y F VA NEILRK RRLKLDVVTPLLPV+GS++SQ EDDSIYS+LLD+D+ +D S ++LPQWMWASNVAIYSN + K D ++P+WGW D+ T +S SFS SKLF+L+E PL +PRRLTIPLVEEE+WSK YAV SA LAP+LLAFLW+T+D+ +S + Y GVS+G LGVLA+ TRSD PPQ+FL+ WVLGGF MSIVWFYMIANELVALL G+GVILG+ P+ILGLTVLAWGNSMGDLVSNVALA NGGDG+QIALSGCYAGPMFNTLIGLGISMLLGAW+ + G YT+PQDRSL YTMGFL+SGL WALVVLPRNDMRP R LG GLIA+YLIFLS R+ +A GI+ L GLS
Sbjct: 39 RNPILRQSSTRGSYGGSSHSIVFHRRQVVEISVNSSNFIDGSDHNNNNNSSLSGSNPEFCAGLFNHVNFASRCEFLKAHPQCSSAGFFDYTVFFYCDCHENAFAYVILGIWLAALFYLLGNTAADYFCCSLEKLSSLLRLSPTVAGVTLLPLGNGAPDVFASIAAFLGTGTGDVGLNSVLGGAVFVTCVVVGAVSLCVAEQDVRIDRKCFIRDISFFIVTLLSLSLILYVGNVSVGGAIAFVLIYAVYAFAVAANEILRKHARRLKLDVVTPLLPVKGSVFSQGNQEDDSIYSTLLDMDTESDTIMSRSALPQWMWASNVAIYSNQSAKVFDNERPVWGWIDDGIETEHS-SFSCSKLFSLMELPLTMPRRLTIPLVEEESWSKVYAVGSASLAPILLAFLWSTQDSVGSKSRKVAYFLGVSIGCALGVLAFRYTRSDRPPQKFLLPWVLGGFLMSIVWFYMIANELVALLVGLGVILGINPSILGLTVLAWGNSMGDLVSNVALAMNGGDGVQIALSGCYAGPMFNTLIGLGISMLLGAWSEKPGLYTLPQDRSLVYTMGFLISGLIWALVVLPRNDMRPTRRLGVGLIALYLIFLSGRVISATGIISLAGLS 651
BLAST of DCAR_026419 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2Z7C4M3 ((Cation/calcium exchanger 4-like {ECO:0000313|EMBL:KZV41864.1}))
HSP 1 Score: 806.594 bits (2082), Expect = 0.000e+0
Identity = 396/582 (68.04%), Postives = 473/582 (81.27%), Query Frame = 0
Match: A0A2Z7C4M3 ((Cation/calcium exchanger 4-like {ECO:0000313|EMBL:KZV41864.1}))
HSP 1 Score: 806.594 bits (2082), Expect = 0.000e+0
Identity = 396/582 (68.04%), Postives = 473/582 (81.27%), Query Frame = 0
Query: 180 IVELGVNSSDAMDVTEPNNSSVLDDLSCYNLFHHQGYGSSCDYLKAHPECSSPGFFDYVKFYYCDCGQSSFAFIVFGVWLVALFYLLGNTAADYFCCSLEKLASLLKLSPTVAGVALLPLGNGAPDVFASIAAFVGTDAGDVGLNSVLGGALFVTCVVAGAVSLCVADQGFQIDHKCFIRDILFFMCTLMALLFILIVGKVSAWAAVAFVSIYLAYGFVVATNEILRKQVRRLKLDVVTPLLPVRGSIYSQSGLEDDSIYSSLLDIDSTADGDQSNASLPQWMWASNVAIYSN-TLKAIDGDKPLWGWSDESYGTGNSFSFSWSKLFALLEFPLIVPRRLTIPLVEEETWSKFYAVASAFLAPVLLAFLWNTRDNATLQSTILGYVFGVSVGSTLGVLAYWNTRSDSPPQRFLVLWVLGGFCMSIVWFYMIANELVALLQGVGVILGVKPTILGLTVLAWGNSMGDLVSNVALATNGGDGLQIALSGCYAGPMFNTLIGLGISMLLGAWTGETGSYTIPQDRSLFYTMGFLVSGLTWALVVLPRNDMRPNRMLGAGLIAIYLIFLSIRMSNAMGILPLFGLS 760
+VEL ++SS ++ + + S+ C L H+GY SSC++L+A+P+C G DY+KFYYCDCG+S + ++V GVWL ALFYLLGNTAADYFCCSL+KL+S+LKLSPTVAGV LLPLGNGAPDVFASIAAFVGT AGDVGLNSVLGGA+FVTC+V G VSLCVAD FQID KCFIRDI+FFM ++MALL IL+ G VS A+AF+SIY+ Y VVA NE+LR+Q +RLKLD VTPLLPVRGS++SQ ED+S+ S LLD+++ DG QS++SLPQWMWASNVAIYSN LK DG+K LWGW+DE G N + FS+SKL LLE PL VPRRLTIPLVEEETWSKFYAV SA LAPVLL+ +W+T+DN + QS I+GY+ GV +G T G+LAY +TRSD PPQ+FL+ WVLGGF MSIVWFYMIANELVALL G+GVILG+ P ILG TVLAWGNSMGDLVSNVAL+ NGGD +QIA+SGCYAGPMFN LIGLGISMLL AW+ + G IP+D SL+YT+ FL++GL WALVVLPRN MRPNRMLGAGLI IY++FLS R+ A+G++ G S
Sbjct: 1 MVELSMDSSVNLNGSTSDYLSIKKPELCSGLVDHKGYNSSCEFLEAYPQCKPGGLLDYMKFYYCDCGESVWTYLVLGVWLAALFYLLGNTAADYFCCSLQKLSSILKLSPTVAGVTLLPLGNGAPDVFASIAAFVGTGAGDVGLNSVLGGAVFVTCIVVGVVSLCVADHDFQIDRKCFIRDIIFFMVSIMALLLILVAGTVSVGTAIAFLSIYVVYAIVVAANEVLREQAQRLKLDAVTPLLPVRGSVFSQGTHEDESMLSPLLDLETDDDGAQSHSSLPQWMWASNVAIYSNQVLKIPDGEKSLWGWNDEDSGMENQY-FSYSKLCPLLELPLTVPRRLTIPLVEEETWSKFYAVGSALLAPVLLSCIWSTQDNVSSQSRIIGYLLGVVIGCTFGILAYNHTRSDHPPQKFLLPWVLGGFFMSIVWFYMIANELVALLVGLGVILGINPAILGSTVLAWGNSMGDLVSNVALSMNGGDSVQIAMSGCYAGPMFNMLIGLGISMLLAAWSAQPGWLKIPRDMSLYYTLSFLMAGLIWALVVLPRNGMRPNRMLGAGLITIYMLFLSFRVGTALGLISFAGFS 581
BLAST of DCAR_026419 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A0V0IU33 ((Putative cation/calcium exchanger 4-like {ECO:0000313|EMBL:JAP36008.1}))
HSP 1 Score: 805.823 bits (2080), Expect = 0.000e+0
Identity = 422/616 (68.51%), Postives = 496/616 (80.52%), Query Frame = 0
Match: A0A0V0IU33 ((Putative cation/calcium exchanger 4-like {ECO:0000313|EMBL:JAP36008.1}))
HSP 1 Score: 805.823 bits (2080), Expect = 0.000e+0
Identity = 422/616 (68.51%), Postives = 496/616 (80.52%), Query Frame = 0
Query: 149 TDYIANANNPVYTRW---SSKPGLSGRTPVFRRQIVELGVNSSDAMDVTEPNNSSVLDDLSCYNLFHHQGYGSSCDYLKAHPECSSPGFFDYVKFYYCDCGQSSFAFIVFGVWLVALFYLLGNTAADYFCCSLEKLASLLKLSPTVAGVALLPLGNGAPDVFASIAAFVGTDAGDVGLNSVLGGALFVTCVVAGAVSLCVADQGFQIDHKCFIRDILFFMCTLMALLFILIVGKVSAWAAVAFVSIYLAYGFVVATNEILRKQVRRLKLDVVTPLLPVRGSIYSQSGLEDDSIYSSLLDIDSTADGDQSNASLPQWMWASNVAIYSN-TLKAIDGDKPLWGWSDESYGTGNSFSFSWSKLFALLEFPLIVPRRLTIPLVEEETWSKFYAVASAFLAPVLLAFLWNTRDNATLQSTILGYVFGVSVGSTLGVLAYWNTRSDSPPQRFLVLWVLGGFCMSIVWFYMIANELVALLQGVGVILGVKPTILGLTVLAWGNSMGDLVSNVALATNGGDGLQIALSGCYAGPMFNTLIGLGISMLLGAWTGETGSYTIPQDRSLFYTMGFLVSGLTWALVVLPRNDMRPNRMLGAGLIAIYLIFLSIRMSNAMGILPLFGLS 760
++ I ++ V ++W S G S T V RR ++E+ + +D + V +P C LF H G+ SSCD+LK HP+CSS GFFDY+KFYYC C S++AF+VFGVWL +LFYLLGNTAADYFC SLEKLASLLKLSPTVAGV LLPLGNGAPDVFASIAAFVG+ AGDVGLNSVLGGA+FVTC+V GAVSLCVADQ Q+D KCFIRDI+FF+ TLM+LL ILIVG+VS A +AFV IY+ Y FVVA NEILRK RRL+LDVVTPLLPVRGSI+S+ E+DS+YSSLLD+++ + QS+ SLPQWMWASNVAIYSN +L+ DG++PLWGW DE S SFS S+L +LLE PL VPRRLTIPLVEEETWSK Y V SA LAPVLLA LWNT+DN + + V G+SVG TLG+LAY +TR+D PPQ FL+ WVLGGF MSIVWFYMIANELVALL G+GV+LGV P+ILGLTVLAWGNSMGDLVSNVALA NGGDG+QIALSGCYAGPMFNTLIGLGIS+ LGAW+ + S+ +P+DRSLFYT+ FL+ GL WALVVLP+NDMRPN+MLG GLI IYL+FLS+R+S+AMGI+ LFGLS
Sbjct: 39 SNLILKKSSLVSSQWHPSSRFDGYSSHTRVVRRGMLEVNGSDADDLVVKKPQ--------LCAGLFDHVGFKSSCDFLKVHPDCSSGGFFDYLKFYYCGCNGSAWAFVVFGVWLASLFYLLGNTAADYFCGSLEKLASLLKLSPTVAGVVLLPLGNGAPDVFASIAAFVGSGAGDVGLNSVLGGAVFVTCIVVGAVSLCVADQDVQVDKKCFIRDIVFFIVTLMSLLLILIVGEVSVIATIAFVLIYVVYAFVVAANEILRKHARRLRLDVVTPLLPVRGSIFSEGTQEEDSVYSSLLDVETEDNSIQSHGSLPQWMWASNVAIYSNQSLRVHDGERPLWGWIDEGVEV-KSPSFSCSQLCSLLELPLTVPRRLTIPLVEEETWSKPYTVGSATLAPVLLAALWNTQDNVSYLGRSVAIVLGISVGCTLGILAYKHTRADRPPQMFLLPWVLGGFIMSIVWFYMIANELVALLVGLGVVLGVNPSILGLTVLAWGNSMGDLVSNVALAMNGGDGVQIALSGCYAGPMFNTLIGLGISLFLGAWSEKPSSFILPRDRSLFYTICFLLFGLLWALVVLPKNDMRPNKMLGVGLIIIYLVFLSVRLSSAMGIVSLFGLS 645
BLAST of DCAR_026419 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1BWC6 ((Cation/calcium exchanger 4 {ECO:0000313|EnsemblPlants:PGSC0003DMT400054444}))
HSP 1 Score: 805.438 bits (2079), Expect = 0.000e+0
Identity = 423/616 (68.67%), Postives = 495/616 (80.36%), Query Frame = 0
Match: M1BWC6 ((Cation/calcium exchanger 4 {ECO:0000313|EnsemblPlants:PGSC0003DMT400054444}))
HSP 1 Score: 805.438 bits (2079), Expect = 0.000e+0
Identity = 423/616 (68.67%), Postives = 495/616 (80.36%), Query Frame = 0
Query: 149 TDYIANANNPVYTRW---SSKPGLSGRTPVFRRQIVELGVNSSDAMDVTEPNNSSVLDDLSCYNLFHHQGYGSSCDYLKAHPECSSPGFFDYVKFYYCDCGQSSFAFIVFGVWLVALFYLLGNTAADYFCCSLEKLASLLKLSPTVAGVALLPLGNGAPDVFASIAAFVGTDAGDVGLNSVLGGALFVTCVVAGAVSLCVADQGFQIDHKCFIRDILFFMCTLMALLFILIVGKVSAWAAVAFVSIYLAYGFVVATNEILRKQVRRLKLDVVTPLLPVRGSIYSQSGLEDDSIYSSLLDIDSTADGDQSNASLPQWMWASNVAIYSN-TLKAIDGDKPLWGWSDESYGTGNSFSFSWSKLFALLEFPLIVPRRLTIPLVEEETWSKFYAVASAFLAPVLLAFLWNTRDNATLQSTILGYVFGVSVGSTLGVLAYWNTRSDSPPQRFLVLWVLGGFCMSIVWFYMIANELVALLQGVGVILGVKPTILGLTVLAWGNSMGDLVSNVALATNGGDGLQIALSGCYAGPMFNTLIGLGISMLLGAWTGETGSYTIPQDRSLFYTMGFLVSGLTWALVVLPRNDMRPNRMLGAGLIAIYLIFLSIRMSNAMGILPLFGLS 760
++ I ++ V ++W S G S T V RR ++E+ + +D + V +P C LF H G+ SSCD+LK HP+CSS GFFDY+KFYYC C S++AF VFGVWL ALFYLLGNTAADYFC SLEKLASLLKLSPTVAGV LLPLGNGAPDVFASIAAFVG+ AGDVGLNSVLGGA+FVTC+V GAVSLCVADQ Q+D KCFIRDI+FF+ TLM+LL ILIVG+VS A +AFV IY+ Y FVVA NEILRK RRL+LDVVTPLLPVRGSI+S+ E+DS+YSSLLD+++ + QS+ SLPQWMWASNVAIYSN +L+ DG++PLWGW DE S SFS S+L +LLE PL VPRRLTIPLVEEETWSK YAV SA LAP LLA LWNT+DN + + V G+SVG TLG+LAY +TR+D PPQ FL+ WVLGGF MSIVWFYMIANELVALL G+GV+LGV P+ILGLTVLAWGNSMGDLVSNVALA NGGDG+QIALSGCYAGPMFNTLIGLGIS+ LGAW+ + S+ +P+DRSLFYT+ FL+ GL WALVVLP+NDMRPN+MLG GLI IYL+FLS+R+S+AMGI+ LFGLS
Sbjct: 39 SNLILKKSSLVSSQWHPSSRFDGYSSHTRVVRRGMLEVNGSDADDLVVKKPQ--------LCAGLFDHVGFKSSCDFLKVHPDCSSGGFFDYLKFYYCGCNGSAWAFAVFGVWLAALFYLLGNTAADYFCGSLEKLASLLKLSPTVAGVVLLPLGNGAPDVFASIAAFVGSGAGDVGLNSVLGGAVFVTCIVVGAVSLCVADQDVQVDKKCFIRDIVFFIVTLMSLLLILIVGEVSVVATIAFVLIYVVYAFVVAANEILRKHARRLRLDVVTPLLPVRGSIFSEGTQEEDSVYSSLLDVETEDNSIQSHGSLPQWMWASNVAIYSNQSLRVHDGERPLWGWIDEGVEV-KSPSFSCSQLCSLLELPLTVPRRLTIPLVEEETWSKPYAVGSATLAPFLLAALWNTQDNVSYLGRSVAIVLGISVGCTLGILAYKHTRADRPPQMFLLPWVLGGFIMSIVWFYMIANELVALLVGLGVVLGVNPSILGLTVLAWGNSMGDLVSNVALAMNGGDGVQIALSGCYAGPMFNTLIGLGISLFLGAWSDKPSSFILPRDRSLFYTICFLMFGLLWALVVLPKNDMRPNKMLGVGLIVIYLVFLSVRLSSAMGIVSLFGLS 645
BLAST of DCAR_026419 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PW14 ((Cation/calcium exchanger like {ECO:0000313|EMBL:PSR96950.1}))
HSP 1 Score: 804.283 bits (2076), Expect = 0.000e+0
Identity = 418/588 (71.09%), Postives = 491/588 (83.50%), Query Frame = 0
Match: A0A2R6PW14 ((Cation/calcium exchanger like {ECO:0000313|EMBL:PSR96950.1}))
HSP 1 Score: 804.283 bits (2076), Expect = 0.000e+0
Identity = 418/588 (71.09%), Postives = 491/588 (83.50%), Query Frame = 0
Query: 175 VFRRQIVELGVNSSDAMDVTEPNNSSVLDDLS-CYNLFHHQGYGSSCDYLKAHPECSSPGFFDYVKFYYCDCGQSSFAFIVFGVWLVALFYLLGNTAADYFCCSLEKLASLLKLSPTVAGVALLPLGNGAPDVFASIAAFVGTDAGDVGLNSVLGGALFVTCVVAGAVSLCVADQGFQIDHKCFIRDILFFMCTLMALLFILIVGKVSAWAAVAFVSIYLAYGFVVATNEILRKQVRRLKLDVVTPLLPVRGSIYSQSGLEDDSIYSSLLDIDSTADGDQSNASLPQWMWASNVAIYSN-TLKAIDGDKPLWGWSDESYGTGNSFSFSWSKLFALLEFPLIVPRRLTIPLVEEETWSKFYAVASAFLAPVLLAFLWNTRDNATLQSTILGYVFGVSVGSTLGVLAYWNTRSDSPPQRFLVLWVLGGFCMSIVWFYMIANELVALLQGVGVILGVKPTILGLTVLAWGNSMGDLVSNVALATNGGDGLQIALSGCYAGPMFNTLIGLGISMLLGAWTGETGSYTIPQDRSLFYTMGFLVSGLTWALVVLPRNDMRPNRMLGAGLIAIYLIFLSIRMSNAMGILPLFGLS 760
+ R++VE+GVNSS+ +D T+ NN+ ++ C LF+H G+ S C++LKAHP+CSS GFFDYVKF+YC+C +S+FA+++ GVWL ALFYLLGNTAADYFCCSLEKL+SLLKLSPTVAGV LLPLGNGAPDVFASIAAFVGT G VGLNSVLGGA+FVTC+V G VSLCVADQ QID KCFIRDI FF+ TL++L IL VGKVS AA+AFVSIY+ Y V NEI RK RRLKLD VTPLLPVRGS++SQ E+DSIYSSLL++D+ ++ QS++S+PQWMWASNVAIYSN +LK D ++P+WGW D+S+ T +S SFS S+L +L+E PL VPRRLTIPLVEEETWSK YAV SA LAP+LLAFLW+T D+ QS +GY GVS+G LGVLAY NTRSD PPQ+FL+ WVLGGF MSIVWFYMIANELVA+L G+GVILGV P+ILGLTVLAWGNSMGDLVSNVALA NGGDG+QIALSGCYAGPMFNTLIGLGISMLLGAW+ + GSY +PQD SLFYTMGFL+SGL WALVVLPRNDMRP+R LG GLIA+Y IFL +R+ +A G++ L GLS
Sbjct: 69 IIHRRMVEIGVNSSNLIDETDNNNTVTVNYPEFCTGLFNHVGFASHCEFLKAHPQCSSGGFFDYVKFFYCNCQESAFAYVILGVWLAALFYLLGNTAADYFCCSLEKLSSLLKLSPTVAGVTLLPLGNGAPDVFASIAAFVGTGTGGVGLNSVLGGAVFVTCIVVGTVSLCVADQEVQIDRKCFIRDISFFIFTLLSLSLILFVGKVSVGAAIAFVSIYVVYALAVGANEIFRKHARRLKLDAVTPLLPVRGSVFSQGNQENDSIYSSLLNMDTESNTIQSHSSVPQWMWASNVAIYSNQSLKGFDSERPVWGWVDDSFETEHS-SFSCSQLCSLMELPLTVPRRLTIPLVEEETWSKVYAVGSASLAPILLAFLWSTLDSVGSQSVKVGYFLGVSIGCALGVLAYRNTRSDRPPQKFLLPWVLGGFLMSIVWFYMIANELVAVLVGLGVILGVNPSILGLTVLAWGNSMGDLVSNVALAMNGGDGVQIALSGCYAGPMFNTLIGLGISMLLGAWSEKPGSYLVPQDTSLFYTMGFLMSGLIWALVVLPRNDMRPSRRLGVGLIALYFIFLFLRLISATGVVLLAGLS 655
BLAST of DCAR_026419 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834YXV9 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8393636.1}))
HSP 1 Score: 801.201 bits (2068), Expect = 0.000e+0
Identity = 409/626 (65.34%), Postives = 489/626 (78.12%), Query Frame = 0
Match: A0A834YXV9 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8393636.1}))
HSP 1 Score: 801.201 bits (2068), Expect = 0.000e+0
Identity = 409/626 (65.34%), Postives = 489/626 (78.12%), Query Frame = 0
Query: 145 IRRNTDYIANANNPVYTRWSSKPGL---SGRTPVFRRQIVELGVNSSD---AMDVTEPNNSSVLDDLSCYNLFHHQGYGSSCDYLKAHPECSSPGFFDYVKFYYCDCGQSSF-AFIVFGVWLVALFYLLGNTAADYFCCSLEKLASLLKLSPTVAGVALLPLGNGAPDVFASIAAFVGTDAGDVGLNSVLGGALFVTCVVAGAVSLCVADQGFQIDHKCFIRDILFFMCTLMALLFILIVGKVSAWAAVAFVSIYLAYGFVVATNEILRKQVRRLKLDVVTPLLPVRGSIYSQSGLEDDSIYSSLLDIDSTADGDQSNASLPQWMWASNVAIYSNTLKAI---DGDKPLWGWSDESYGTGNSFSFSWSKLFALLEFPLIVPRRLTIPLVEEETWSKFYAVASAFLAPVLLAFLWNTRDNATLQSTILGYVFGVSVGSTLGVLAYWNTRSDSPPQRFLVLWVLGGFCMSIVWFYMIANELVALLQGVGVILGVKPTILGLTVLAWGNSMGDLVSNVALATNGGDGLQIALSGCYAGPMFNTLIGLGISMLLGAWTGETGSYTIPQDRSLFYTMGFLVSGLTWALVVLPRNDMRPNRMLGAGLIAIYLIFLSIRMSNAMGILPLFGLS 760
I RN ++ + + + +WSS+ G SG V R+ +E+GVNSSD +DV NN +V + C L +H+GY S C+YLK HP+C+S GFFDY+ F+YC + SF + V G+WL ALFYLLGNTAADYFCCSLEKL++LLKL PTVAGV+LLPLGNGAPDVFASIAAFVGTDAG+VGLNSVLGGALFVTC+V GAVSLCVA++ QID KCFIRDI FF+ T+++L ILI+GKVS A+ FVSIY+ Y F VA NEIL K RRL+LDVVTPLLP++GSI+S ED+SIYS LLD+DS +D + +LPQWMWASNVAIYSN + + +PLWGW+DES S SFS SKLF L+E PL +PRRLTIP+VEEE WSK YAVASA LAP+LLA LWN++DN QS I YV GV+VG TLGVLA+ TR+D PP++FL WV GGF MSIVWFY++ANELVALL +GVILG+ P+ILGLTVLAWGNSMGDL+SNVALATNGGDG+QIALSGCYAGPMFNTL GLGISMLL AW+ SY +P+D SLFYT+ FL+SGL WAL VLPRNDMRP+R+LG GLI IYL FL+IR+S+AMG++ L GLS
Sbjct: 37 ILRN-QFLRQSPSMLSPQWSSRGGFYDRSGHLGVIHRRTIEVGVNSSDNIVGIDVANQNNLTVKNPALCAGLSNHKGYTSRCEYLKTHPQCTSGGFFDYIMFFYCKWEKFSFFGYAVLGIWLAALFYLLGNTAADYFCCSLEKLSNLLKLPPTVAGVSLLPLGNGAPDVFASIAAFVGTDAGEVGLNSVLGGALFVTCIVVGAVSLCVAEKRVQIDRKCFIRDIGFFILTILSLSMILIIGKVSFVGAIVFVSIYVVYAFFVAANEILGKHARRLRLDVVTPLLPIKGSIFSHGSEEDESIYSPLLDVDSQSDPPHLHTTLPQWMWASNVAIYSNQALKVSMEESTRPLWGWTDESREIDCS-SFSCSKLFLLMEMPLTLPRRLTIPIVEEERWSKAYAVASASLAPILLALLWNSQDNVGSQSRIDAYVIGVAVGGTLGVLAFLYTRTDQPPRKFLFPWVFGGFLMSIVWFYIVANELVALLVALGVILGINPSILGLTVLAWGNSMGDLMSNVALATNGGDGVQIALSGCYAGPMFNTLAGLGISMLLRAWSDRPASYIVPRDSSLFYTIIFLLSGLVWALFVLPRNDMRPSRLLGLGLIIIYLTFLTIRVSSAMGVVSLAGLS 660
BLAST of DCAR_026419 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6N2CLA5 ((Uncharacterized protein {ECO:0000313|EMBL:TMX05762.1}))
HSP 1 Score: 801.201 bits (2068), Expect = 0.000e+0
Identity = 420/613 (68.52%), Postives = 492/613 (80.26%), Query Frame = 0
Match: A0A6N2CLA5 ((Uncharacterized protein {ECO:0000313|EMBL:TMX05762.1}))
HSP 1 Score: 801.201 bits (2068), Expect = 0.000e+0
Identity = 420/613 (68.52%), Postives = 492/613 (80.26%), Query Frame = 0
Query: 152 IANANNPVYTRWSSKP---GLSGRTPVFRRQIVELGVNSSDAMDVTEPNNSSVLDDLSCYNLFHHQGYGSSCDYLKAHPECSSPGFFDYVKFYYCDCGQSSFAFIVFGVWLVALFYLLGNTAADYFCCSLEKLASLLKLSPTVAGVALLPLGNGAPDVFASIAAFVGTDAGDVGLNSVLGGALFVTCVVAGAVSLCVADQGFQIDHKCFIRDILFFMCTLMALLFILIVGKVSAWAAVAFVSIYLAYGFVVATNEILRKQVRRLKLDVVTPLLPVRGSIYSQSGLEDDSIYSSLLDIDSTADGDQSNASLPQWMWASNVAIYSN-TLKAIDGDKPLWGWSDESYGTGNSFSFSWSKLFALLEFPLIVPRRLTIPLVEEETWSKFYAVASAFLAPVLLAFLWNTRDNATLQSTILGYVFGVSVGSTLGVLAYWNTRSDSPPQRFLVLWVLGGFCMSIVWFYMIANELVALLQGVGVILGVKPTILGLTVLAWGNSMGDLVSNVALATNGGDGLQIALSGCYAGPMFNTLIGLGISMLLGAWTGETGSYTIPQDRSLFYTMGFLVSGLTWALVVLPRNDMRPNRMLGAGLIAIYLIFLSIRMSNAMGILPLFGLS 760
I ++ V ++W+ G S T V RR ++E+ + +D + V +P C LF H G+ SSCD+LK HP+CSS GFFDY+KFYYC C S++AF+VFGVWL ALFYLLGNTAADYFC SLEKLASLLKLSPTVAGV LLPLGNGAPDVFASIAAFVG+ AGDVGLNSVLGGA+FVTCVV GAVSLCVADQ Q+D KCFIRDI FF+ TLM+LL ILIVG+VS A +AFV IY+ Y FVVA NEILRK RRL+LDVVTPLLPVRGSI+S+ E+DS+YS+LLD+++ + QS+ SLPQWMWASNVAIYSN +L+ DG++PLWGW DE S SFS S+L +LLE PL VPRRLTIPLVEEETWSK YAV SA LAP LL LWNT+D+ + + V G+SVG TLG+LAY +TR+D PPQ FL+ WVLGGF MSIVWFYMIANELVALL G+GV+LGV P+ILGLTVLAWGNSMGDLVSNVALA NGGDG+QIALSGCYAGPMFNTLIGLGIS+ LGAW+ + S+ +P+DRSLFYT+ FL+ GL WALVVLP+NDMRPN+MLG GLI IYL+FLS+R+S+AMGI+ LFGLS
Sbjct: 42 IIKKSSLVSSQWNQSSRFDGYSSHTRVVRRGMLEVNGSDADDLVVKKPQ--------LCAGLFDHVGFKSSCDFLKVHPDCSSGGFFDYLKFYYCGCNGSAWAFVVFGVWLAALFYLLGNTAADYFCGSLEKLASLLKLSPTVAGVVLLPLGNGAPDVFASIAAFVGSGAGDVGLNSVLGGAVFVTCVVVGAVSLCVADQDVQVDKKCFIRDIAFFIVTLMSLLLILIVGEVSVVATIAFVLIYVIYAFVVAANEILRKHARRLRLDVVTPLLPVRGSIFSEGTQEEDSVYSTLLDVETEDNSIQSHGSLPQWMWASNVAIYSNQSLRVHDGERPLWGWIDEGVEV-KSPSFSCSQLCSLLELPLTVPRRLTIPLVEEETWSKPYAVGSATLAPFLLTALWNTQDHVSYLGRSVAIVLGISVGCTLGILAYKHTRADRPPQMFLLPWVLGGFIMSIVWFYMIANELVALLVGLGVVLGVNPSILGLTVLAWGNSMGDLVSNVALAMNGGDGVQIALSGCYAGPMFNTLIGLGISLFLGAWSEKPSSFILPRDRSLFYTICFLLFGLLWALVVLPKNDMRPNKMLGVGLIIIYLVFLSVRLSSAMGIVSLFGLS 645
BLAST of DCAR_026419 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6XIR6 ((cation/calcium exchanger 3-like {ECO:0000313|RefSeq:XP_027126826.1}))
HSP 1 Score: 799.275 bits (2063), Expect = 0.000e+0
Identity = 414/601 (68.89%), Postives = 488/601 (81.20%), Query Frame = 0
Match: A0A6P6XIR6 ((cation/calcium exchanger 3-like {ECO:0000313|RefSeq:XP_027126826.1}))
HSP 1 Score: 799.275 bits (2063), Expect = 0.000e+0
Identity = 414/601 (68.89%), Postives = 488/601 (81.20%), Query Frame = 0
Query: 161 TRWSSKPGLSGRTPVFRRQIVELGVNSSDAMDVTEPNNSSVLDDLSCYNLFHHQGYGSSCDYLKAHPECSSPGFFDYVKFYYCDCGQSSFAFIVFGVWLVALFYLLGNTAADYFCCSLEKLASLLKLSPTVAGVALLPLGNGAPDVFASIAAFVGTDAGDVGLNSVLGGALFVTCVVAGAVSLCVADQGFQIDHKCFIRDILFFMCTLMALLFILIVGKVSAWAAVAFVSIYLAYGFVVATNEILRKQVRRLKLDVVTPLLPVRGSIYSQSGLEDDSIYSSLLDIDSTADGDQSNASLPQWMWASNVAIYSN-TLKAIDGDKPLWGWSDESYGTGNSFSFSWSKLFALLEFPLIVPRRLTIPLVEEETWSKFYAVASAFLAPVLLAFLWNTRDNATLQSTILGYVFGVSVGSTLGVLAYWNTRSDSPPQRFLVLWVLGGFCMSIVWFYMIANELVALLQGVGVILGVKPTILGLTVLAWGNSMGDLVSNVALATNGGDGLQIALSGCYAGPMFNTLIGLGISMLLGAWTGETGSYTIPQDRSLFYTMGFLVSGLTWALVVLPRNDMRPNRMLGAGLIAIYLIFLSIRMSNAMGILPLFGLS 760
+W+S G T R++VEL +NSS +++ ++PN+ S C L H GY SSC++LKAHPECSS GFFDY+KFYYC C SS+AF+VFGVWLVALFYLLGNTAADYFCCSLEKLA LLKLSP+VAGVALLPLGNGAPDVFASIAAFVG+DAG+VGLNSVLGGA+FVTC+VAGAVSLCVA+Q QID CFIRD+ FF+ L++LL IL+ GKV A+AF+ IY+ Y FVVA NEILRK+V RLKLD VTPLLPVRGSI+SQ ED+SIY+ LLD ++ +DG QS ++LPQWMWASNVAIYSN +LK +D D+P+WGW+DE S SFS SKL ++LE PL VPRRLTIP VEEE WSKFYAV +A LAP+LLA LWN+ D A+ QS + Y GVS G LG+LA TRS+ PP++FL+ WVLGGF MSIVWFYMIANELVALL G+GV+LGV P++LGLTVLAWGNSMGDLVSNVALA NGGDG+QIA+SGCYAGPMFNTLIGLG SMLLGAW+ + G + +P DRSL+ T+GFL+SGL WALVVLPRNDM P+RMLG GLI IYLIFLS+R+ +AMG+ L GLS
Sbjct: 54 VQWTSTSGYHIYTGKIHRRMVELSINSSISVNGSDPNSLSDKHPEFCSGLIEHVGYKSSCEFLKAHPECSSGGFFDYIKFYYCSCSGSSWAFLVFGVWLVALFYLLGNTAADYFCCSLEKLAGLLKLSPSVAGVALLPLGNGAPDVFASIAAFVGSDAGEVGLNSVLGGAVFVTCIVAGAVSLCVAEQDVQIDRNCFIRDVTFFIVALLSLLAILVSGKVGVGGAIAFLMIYVVYAFVVAANEILRKEVERLKLDAVTPLLPVRGSIFSQGTQEDESIYNPLLDFETGSDGIQSRSTLPQWMWASNVAIYSNQSLKVLDEDRPVWGWNDEGIEIEYS-SFSCSKLCSILELPLTVPRRLTIPAVEEERWSKFYAVGNASLAPILLACLWNSADTASGQSGKVAYFLGVSSGCVLGILACKYTRSEHPPRKFLLPWVLGGFLMSIVWFYMIANELVALLVGLGVVLGVNPSLLGLTVLAWGNSMGDLVSNVALAINGGDGVQIAMSGCYAGPMFNTLIGLGFSMLLGAWSEKPGLFIVPMDRSLYCTLGFLISGLLWALVVLPRNDMHPSRMLGTGLITIYLIFLSVRVCSAMGMFSLGGLS 653
BLAST of DCAR_026419 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4DM06 ((Uncharacterized protein {ECO:0000313|EMBL:THG04002.1}))
HSP 1 Score: 798.505 bits (2061), Expect = 0.000e+0
Identity = 412/614 (67.10%), Postives = 489/614 (79.64%), Query Frame = 0
Match: A0A4S4DM06 ((Uncharacterized protein {ECO:0000313|EMBL:THG04002.1}))
HSP 1 Score: 798.505 bits (2061), Expect = 0.000e+0
Identity = 412/614 (67.10%), Postives = 489/614 (79.64%), Query Frame = 0
Query: 156 NNPVYTRWSSKP--GLSGRTPVF-RRQIVELGVNSSDAMDVTEPNNSSVLDDLS-----CYNLFHHQGYGSSCDYLKAHPECSSPGFFDYVKFYYCDCGQSSFAFIVFGVWLVALFYLLGNTAADYFCCSLEKLASLLKLSPTVAGVALLPLGNGAPDVFASIAAFVGTDAGDVGLNSVLGGALFVTCVVAGAVSLCVADQGFQIDHKCFIRDILFFMCTLMALLFILIVGKVSAWAAVAFVSIYLAYGFVVATNEILRKQVRRLKLDVVTPLLPVRGSIYSQSGLEDDSIYSSLLDIDSTADGDQSNASLPQWMWASNVAIYSN-TLKAIDGDKPLWGWSDESYGTGNSFSFSWSKLFALLEFPLIVPRRLTIPLVEEETWSKFYAVASAFLAPVLLAFLWNTRDNATLQSTILGYVFGVSVGSTLGVLAYWNTRSDSPPQRFLVLWVLGGFCMSIVWFYMIANELVALLQGVGVILGVKPTILGLTVLAWGNSMGDLVSNVALATNGGDGLQIALSGCYAGPMFNTLIGLGISMLLGAWTGETGSYTIPQDRSLFYTMGFLVSGLTWALVVLPRNDMRPNRMLGAGLIAIYLIFLSIRMSNAMGILPLFGLS 760
NP+ + S++ G S + VF RRQ+VE+ VNSS+ +D ++ N ++ C LF+H + S C++LKAHP+CSS GFFDY F+YCDC +++FA+++ G+WL ALFYLLGNTAADYFCCSLEKL+SLL+LSPTVAGV LLPLGNGAPDVFASIAAF+GT GDVGLNSVLGGA+FVTCVV GAVSLCVA+Q +ID KCFIRDI FF+ TL++L IL VG VS +AFV IY Y F VA NEILRK RRLKLDVVT LLPV+GS++SQ EDDSIYS+LLD+D+ +D S ++LPQWMWASNVAIYSN + K D ++P+WGW D+ T +S SFS SKLF+L+E PL +PRRLTIPLVEEE+WSK YAV SA LAP+LLAFLW+T+D+ +S + Y GVS+G LGVLA+ TRSD PPQ+FL+ WVLGGF MSIVWFYMIANELVALL G+GVILG+ P+ILGLTVLAWGNSMGDLVSNVALA NGGDG+QIALSGCYAGPMFNTLIGLGISMLLGAW+ + G YT+PQDRSL YTMGFL+S L W L VLPRNDMRP R LG GLIA+YLIFLS R+ +A GI+ L GLS
Sbjct: 39 RNPILRQSSTRGSYGGSSHSIVFHRRQVVEISVNSSNFIDGSDHNINNNSSLSGSNPEFCAGLFNHVNFASRCEFLKAHPQCSSAGFFDYTVFFYCDCHENAFAYVILGIWLAALFYLLGNTAADYFCCSLEKLSSLLRLSPTVAGVTLLPLGNGAPDVFASIAAFLGTGTGDVGLNSVLGGAVFVTCVVVGAVSLCVAEQDVRIDRKCFIRDISFFIVTLLSLSLILYVGNVSVGGTIAFVLIYAVYAFAVAANEILRKHARRLKLDVVTLLLPVKGSVFSQGNQEDDSIYSTLLDMDTESDTIVSRSALPQWMWASNVAIYSNQSAKVFDNERPVWGWIDDGIETEHS-SFSCSKLFSLMELPLTMPRRLTIPLVEEESWSKVYAVGSASLAPILLAFLWSTQDSVGSKSRKVAYFLGVSIGCALGVLAFRYTRSDRPPQKFLLPWVLGGFLMSIVWFYMIANELVALLVGLGVILGINPSILGLTVLAWGNSMGDLVSNVALAMNGGDGVQIALSGCYAGPMFNTLIGLGISMLLGAWSEKPGLYTLPQDRSLVYTMGFLISALIWVLAVLPRNDMRPTRRLGVGLIALYLIFLSGRVISATGIISLAGLS 651
| Match Name | Stats | Description |
|---|---|---|
| A0A6A4LFQ1 | E-Value: 0.000e+0, PID: 67.22 | (Uncharacterized protein {ECO:0000313|EMBL:KAE9453... [more] |
| A0A4S4EPE2 | E-Value: 0.000e+0, PID: 68.08 | (Uncharacterized protein {ECO:0000313|EMBL:THG1815... [more] |
| A0A2Z7C4M3 | E-Value: 0.000e+0, PID: 68.04 | (Cation/calcium exchanger 4-like {ECO:0000313|EMBL... [more] |
| A0A0V0IU33 | E-Value: 0.000e+0, PID: 68.51 | (Putative cation/calcium exchanger 4-like {ECO:000... [more] |
| M1BWC6 | E-Value: 0.000e+0, PID: 68.67 | (Cation/calcium exchanger 4 {ECO:0000313|EnsemblPl... [more] |
| A0A2R6PW14 | E-Value: 0.000e+0, PID: 71.09 | (Cation/calcium exchanger like {ECO:0000313|EMBL:P... [more] |
| A0A834YXV9 | E-Value: 0.000e+0, PID: 65.34 | (Uncharacterized protein {ECO:0000313|EMBL:KAF8393... [more] |
| A0A6N2CLA5 | E-Value: 0.000e+0, PID: 68.52 | (Uncharacterized protein {ECO:0000313|EMBL:TMX0576... [more] |
| A0A6P6XIR6 | E-Value: 0.000e+0, PID: 68.89 | (cation/calcium exchanger 3-like {ECO:0000313|RefS... [more] |
| A0A4S4DM06 | E-Value: 0.000e+0, PID: 67.10 | (Uncharacterized protein {ECO:0000313|EMBL:THG0400... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |