DCAR_025958

Resource Type: 
Polypeptide
Name: 
DCAR_025958
Identifier: 
DCAR_025958.mRNA-protein
Sequence: 
METISPPLHKKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEI
FEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFD
FALYEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGD
IHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTS
PSKHVEVESLPVQIERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTE
ASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSS
RLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERA
QEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEKNIKFDMLKSSKGDI
FSPKYAREGSEIKTFAEENEKKARNMIHVASSATEGKEDIHSKQGKEHMQ
SQVPHETEGTVAWREATQLYEVVEEKKISEACRSADHSTSSDSGVGETGI
ATAVELQECQMQTKATSADHECQGNVEKFEVFKGGHEQVKIKAAQGSIWQ
EEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQ
DQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENT
IKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNK
EKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEK
IEKGSKITIEQWQNTEREEKASEEAASEERPNDLSEQDETEKRLKEAWEK
KEKWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGKGEGFIEHDI
VQEQLMRVVSDGILNLNQGNYTTMEEPKIFDGGSGHIHEPSVPVENESLE
MEHKTHEREVEVNNEPQEANVNSNLDQNGLQYEGINDKNKDEPLCQIGIT
DMYNEDGIDQTTGIHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQ
PDQHAFNQAENEDKFTAPRVVKKSVENERKPGNVLPAKKFTSQNPEVEET
NFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTA
TREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARER
LIADKASDARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPV
TDKFSAYSRNGGFRQCSSSNDLQNLQHQGMGPSRDLKHSHSSVSGGLEGE
SAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDAD
VKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKA
TLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER*
Sequence Length: 
1392
Sequence Checksum: 
7b0de1c63459c38db83b7c77e9556306
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, DCAR_025958, derives from mRNA, DCAR_025958.
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Blast Results: 
The following BLAST results are available for this feature:
BLAST of DCAR_025958 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_025958 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AS83 (J domain-containing protein {ECO:0000259|PROSITE:PS50076})

HSP 1 Score: 911.753 bits (2355), Expect = 0.000e+0
Identity = 689/1520 (45.33%), Postives = 893/1520 (58.75%), Query Frame = 0
 
Query:    1 METISPPLHKKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQ----IERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIG-QRGEKNIKFDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEG-------KEDIHSKQGKEHMQSQVPHETEGTVAWREA--TQLYEVVEEKKISEACRSAD---HSTSS-DSGVGETGIATAVELQE-CQMQTKATSADHECQGNVEKFEVFKGGHE----QVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEE-----NEVIFIQKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEK-------------GSKITIEQWQNTEREEKASEEAASEERPNDLSEQDETEKRLKEAWEKKEKWKRSREARESE---KRVELLFKEDEIMDRSSEANVW------IKE-GKGEGFIEHDIVQEQL--------------MRV--------VSDGILNL--NQGNYTTMEEPKIFDGGSGHIHEPSVPVENESLEMEHKTHERE---VEVNNEPQEANVNSNL---DQNGLQYEGINDKNKDEPLCQIGITDMYNEDGIDQTTGI---HIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKS-------VENERKPGNVLPAKKFTSQNPEVEETNFQKKTRLEEREKE-RLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNDLQNLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERA-----------------------------------AKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1391
            ME +S  L +KSY +GN  A K  YDDVF   PK  V TLSPR EDY+EIF  FH SR SSIP+LDLP V E    DV FDVRSS FDYSEVF   NG D A+ YE+LF QS A +DSS E WTPAQSESLSDESDPS CSEKNQSLS+G+ ++S D  KQFNISYHKAN + K+N+ + MTHV QL A+PG+ + +++T P   +E E+  +Q    +  + D  G + EGK+LRKT+S P    +G+Q   +    L  N +  S    F++VSD++L+T PS LPPPSRPPP+ A +  +  R NSK KASKSY FE+  + +S P+FDVE+DASSSAAASAAA+KDA+E+AQ +L +AKE+MERKK+GL++  K   K D   + GE +  FD   S   +        +GS +K FA E  KK        S + EG       K+ +  K G E+  SQ  H+T+ TVAWRE   +++ EV + KK+ E     +   H+T S D G  +     A + QE    + KA     E +    K EV +G  E    + + KA + S+ QEEH+ K K+AQM  +    +K+ R   + G+        DKYE ++     +LEE     N V   QK+   NE  +      +A ER+  G             +K + + ++   +  EA  Q   +K +KE  E    E +    +E  +N+++  E  E + K  +L +  + E    RL   L+W+E +K+     E E+ EK               K  +EQ +N +++++A E   +E+R N+  E+++ EK  KEAWE +E  +R +EA ESE   KR+E  FK++EI  RS + + W      +K+ GK +         EQ+               RV         SDG   L  N+  YT +       G      E     E+  +  E +  ERE   VE+ N   E  +NS +   D   L+   I  ++ +E LC         EDGI    GI   HI+      EMASD EN ++ TH R E   + K +Q     F+  E++D+  +  + KK        +E  R      P K  T Q+ E +E N  +    EEREKE R+++ER+LE D LRK+EEE+EREREREKDRM V+ ATREA +RAFA+ R RAERAAVERATAEVR RA+AEARERLEKASAEARER++ DKAS +ARL+AERAAVERATAEARERA EKA AEKA++ +R+R ER + DK    SR+ G R CSSS+D   LQ QG+G S   ++SHSSV GG+EGESAQRCKARLER+QRTAERA                                   AKALAEKNMRDL+A REQ ER+RLAE LDA+VKRWSSGKEGNLRALLSTLQYILGP+SGWQPIPLT+VIT+ AVKKAYRKATLCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:    1 MENLSNSLSRKSY-NGNGFAAKAVYDDVFGGPPKFGVATLSPRVEDYTEIFRSFHTSRASSIPILDLPVVDE---VDVSFDVRSSKFDYSEVFSGFNGLDLAISYEELFNQSNAGDDSSEEAWTPAQSESLSDESDPSACSEKNQSLSNGNSYESLDGLKQFNISYHKANQRSKENMSNGMTHVAQLHAVPGFIYEVNETLP--RLENENTLLQGTSDLNLSMDFNGRIKEGKQLRKTMSHPANGSLGIQTFGSALKPL--NKRCSSLNGTFLTVSDISLQTNPSQLPPPSRPPPVLAVKEADCGRQNSKLKASKSYDFEQMASDNSPPFFDVEVDASSSAAASAAAMKDAMEKAQAKLKSAKELMERKKEGLQS-CKLGLKNDKKVKEGEVSKFFDGSTSFNNERVQGTCDLDGSGMKAFAAEERKKVTKTTRAVSDSIEGERHINVAKKAVEKKHGWEYSSSQAFHKTDRTVAWRELPFSEVVEVDKSKKVIEQSNDENILVHNTKSHDCGQEKKAAMEAFDHQEKNNRKIKAAREAPEWKEKENKSEVAEGAWEWDEYKGRSKATKESLVQEEHENKIKVAQMVCQQAENEKKLRVGQRHGDIERILTEADKYEENE-----KLEEVPRGSNGVNVTQKLKEVNERIKNEKRFEDAHEREDKG-----------RKVKETVEREEHDKRLTEAIEQKENEKRQKEALEQEEKEIQEKVAHEREENEKRLKETYEREEKEKRLNDALKSEVDEKRLKEALEWEENEKKHKLAYEREENEKRLVEALKQEENQKKLKEALEQEENAKKQKEAYEREENEKRINEACEREDKEKS-KEAWEVEENKQRLQEAHESEESEKRLEEAFKQEEIEKRSEKVSEWEETDIGLKDAGKWKVLNGQSKDHEQMGMDGNEKKPKPDQETRVHMERENLKASDGACKLGDNKKQYTQVACKNKNSGKLEMTKEVLSCEEDGVVRTELRGSERELEAVELENVQFEEIINSCIMVEDGTQLEKNQIRTEDDNESLCVHDSVKKLVEDGI----GIGQTHIESKKKALEMASDSEN-HVFTHERGERGTHMKELQV---TFDPEESKDRLMSSHIEKKMGISLPVVLEGTRNAQKTAP-KVGTRQSSERKEKNLNETLTPEEREKEARMKRERELEKDHLRKIEEEREREREREKDRMAVERATREACDRAFAEARGRAERAAVERATAEVRLRAMAEARERLEKASAEARERMLTDKASVEARLRAERAAVERATAEARERAFEKAMAEKAAFGARERAERSIADKLFTASRD-GVRHCSSSSD---LQFQGLGSSSGSRYSHSSVYGGVEGESAQRCKARLERHQRTAERAACVFFPFCFALFKKLRIFCLPRNRKYLKLFLALFQAKALAEKNMRDLLAQREQAERNRLAEVLDAEVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITSVAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1481    
BLAST of DCAR_025958 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RLH0 ((Auxilin-like protein {ECO:0000313|EMBL:PSS30835.1}))

HSP 1 Score: 864.759 bits (2233), Expect = 0.000e+0
Identity = 632/1494 (42.30%), Postives = 873/1494 (58.43%), Query Frame = 0
 
Query:    1 METISPPLHKKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQ----IERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEKNIK-FDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEGKEDIH-SKQGKEHMQ-----SQVPHETEGTVAWREATQLYEVVE---EKKISEACRSADHSTSSDSGVGETGIATAVELQECQMQTKATSADHECQGN---------VEKFEVFKGGHEQVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSG---------------MERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQWQNTER-------------EEKASEEAASEERPNDLSEQDETEKRLKEAWEKKE---KWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGKGEGFIEHDIV----------------QEQLMRVVSDGILNLNQGNYTTMEEPKIFDGGSGHIHE--PSVPVENE----SLEMEHKTHEREVEVNNEPQEANV-NSNLDQNGLQYEGINDKNKDEPLCQIGITD----MYNEDGI------DQTTGIHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERKPGN----VLPAKK---------FTSQNPEVEETNFQKKTRLEEREKER-LEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNDLQNLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1391
            ME +S  + K++Y +GN    KT YDDVF   PK  VPTLSPR EDY+EIF  FH+S  SSIP+LD+PA+ E    D  FDVR+S FDYS+VFG  N  DFA+ +++L  QSK   DSS+E WTPAQSESLSDESDPS  SE++QSLS+G  +QS D   QF+ISY+KA    K+N+   M  VTQL ++PG +F++++T PS+ ++  + P+     +  N D  G + EGK+ RKT+S P   + G Q   T+   + +   +    K+F+SVSD++LRT+PS LPPP R PP+ A R  NS R  SK  ASKS+         S P+FDVE+DA SSAA S AA++DA+E+A  +L +AKE++E  K+GL++ TK   K D   +  K  K  D     K +       R+ S  +T+A E  +       + S++ EG++ I+  K   + M      SQ  ++TEG VAWR+  Q YEVVE    +KI E  +        +S    +G            + KATSA  +  G+         V +++V KG       KA + S  QE+H++K K+ Q     + + ++ R  +Q G   +  N  D        T+ Q ++NEV   +K+    E  E         ERK +G               ++  A  + +E  +K S D+++E  +  EA  +  K K +KE  E+  NE +  + +E  +NK++             L+E  ++EE+  RL + ++ +E +K QN   E  +IEK     + + +N +R             +++A+E   SEERP +  E++E EKRL EAWE+ E   K + + E  ES+KR    FK  E   ++ EAN   +  KG     H  V                 +Q   V  +G   +      T+++ +    G     +   ++ V+      S E +  T    +++N + +   V N++L++   +  G+   ++     QIG  D     Y +D +      D  TG H+ +    +E AS++  ++  TH       N K ++ +       E +DK  +  V ++ +E+ RK G+    VL  K+          T QN E +E N       EEREKE  +++ER+LE D L+++EE++ER+REREKDRM VD AT EARERAFA+TRERAERA+VERATAEVRQR +AEAR+RLEKAS EARER +++KAS +ARL+AERAAVERATAEARERA +KA AEKA +E+R+ +ER V DK S   + GG RQ SS +DLQ++Q  G+G S    +S+SSV GG+EGESAQRCKARLER+QRTAERAAKALAEKNMRDL+A REQ ER+RLAE+LDA+VKRWSSGKEGNLRALLSTLQYILGP+SGWQPIPLT+VIT+AAVKKAYRKA LCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:    1 MENLSHSVSKRAY-NGNGFGDKTLYDDVFGGPPKFGVPTLSPRVEDYAEIFGGFHSSPASSIPILDIPALAE---ADFSFDVRNSHFDYSQVFGGFNALDFAVSFDELLNQSKNRYDSSDEAWTPAQSESLSDESDPSAFSERSQSLSNGGSYQSCDAANQFSISYNKACQTSKENMSTGMACVTQLHSVPGLTFVVNETPPSQKIQDRNTPLLATDVLHPNVDLSGELREGKQFRKTMSYPANRNFGTQTLGTDPKPVRYGRTASLTNKSFVSVSDISLRTQPSQLPPPLRLPPVLAAREINSDRQISKLTASKSFSMGGMAGDCSPPFFDVEVDARSSAAVSTAAMRDAMEKAPAKLRSAKELIE-SKEGLQSHTKFGLKYDAKDKKLKASKSIDGSNCLKDERAHGSCQRDCSPEETYAWEERQTVMKTTQLVSNSIEGEKHINVGKPSADKMHGKDRSSQESYKTEGPVAWRQEAQYYEVVETDKSRKIFEQAKDERLLVQKNSQFHGSG-----------QERKATSAFQQQDGDRRKIKAGWEVHEWDVNKGSS-----KATKESSRQEKHEKKVKVNQEACNQEEIGRKPR-MVQNGNIENIRNEGDN------PTEVQRKQNEVEIEKKLKEVAEGIEDGKPHRIGHERKDNGRRLEETGERERYDYRLKVAAKQEELEKRLKESLDLEKEEKQQREACEREVKGKRQKEARESEENEMRLKEAFEQEENKKR-------------LKEALDREENEKRLKMVIERKENEKRQNLACERNEIEKRLVKDLRREENEKRLSGAFQLEVNGRDQKEANEWEESEERPKEAREREENEKRLDEAWEQIENTNKLQEAHEREESQKRSNEAFKPKENAKKTEEANEGQETQKGIEVAGHCEVLKGCSTEHEQKERKPKSDQRTHVQPEGERFIASDEECTLDDYEDLQSGQAACKQDIKNIKVKKNQRALSFEEDRTTRAESIDINGQVEAVEVVNASLEEQP-KSSGVALVDQQHDKNQIGKNDDTKSPYQQDNVTGSVEADNGTGPHVNRHKTASETASNLGKSHALTHELGRRVINVKEVENE-------ETKDKLMSSHVGRELMESGRKIGSDQTTVLVEKRNAQSTAQKDRTRQNIERKEKNILAP---EEREKEDGIKRERELEKDRLKRIEEDRERKREREKDRMAVDRATLEARERAFAETRERAERASVERATAEVRQRVMAEARDRLEKASTEARERSLSEKASMEARLRAERAAVERATAEARERAFQKAMAEKAHFEAREHIERSVADKSSGACKGGGLRQSSSLSDLQDVQCPGVGASSGPIYSYSSVHGGVEGESAQRCKARLERHQRTAERAAKALAEKNMRDLLAQREQAERNRLAEALDAEVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITSAAVKKAYRKANLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1442    
BLAST of DCAR_025958 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BWM0 (J domain-containing protein {ECO:0000259|PROSITE:PS50076})

HSP 1 Score: 863.988 bits (2231), Expect = 0.000e+0
Identity = 674/1545 (43.62%), Postives = 896/1545 (57.99%), Query Frame = 0
 
Query:    1 METISPPLHKKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQIERN----TDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRS-PGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQR-GEKNIKFDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATE-------GKEDIHSKQGKEHMQSQVPHETEGTVAWREATQLYEVVE---EKKISEACRS----ADHSTSSDSGVGETGIATAVELQECQMQTKATSADHECQGNVEKFE--VFKGGHEQVKIK----AAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKI--EKGSKITI--------------------EQWQNTEREEKASEEAASEERPNDLSEQDETEKRLKEA-----------------------------------------WEKKEKWKRSREAR---ESEKRVELLFKEDEIMDRSSEANVWIKE-------GKGEGFIEHDIVQEQLMRVVSDGILNLNQGNYTTMEEPKIFDGGSGHIHEPSVPVE-NESLEM-----EHKTHEREVEVN--------------------NEPQEANVNSNLDQNGLQYEGINDKNKDEPLCQIGITD---MYNEDGIDQTT--GI-----HIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERKPGNVLPAKKFTSQNPEVEETNFQKKTRLEEREK--------------ERLEKERDLENDFLRKLE---EEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNDLQNLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1391
            ME IS  +  KSY +GN  A +T YDDVF   P   VPTLSPR EDY+EIF  F A+R SSIP+LDLP V E    DV F+V SS FDYS+VF   NG DFA+ YE+LF QSK  +DSS E W+PAQSESLSDESD S CSEKN SLS+GD +QS+D  KQFN SY KAN +  +++ +  THVTQL A+PG+SF++ + SP   +E ES P+Q+  +     D  G + EGK+ RKT+SQP  S  G+Q   ++   L    ++ S P   F+ +S+++LRT PS LPPPSRPPP FA +  +S R NSK KASKS+ FERT AG S P  DVE+DASSSAAASAAA+KDA+E+AQ +L +AKE+MERKK+GL++R    FK DI  + GE    FD   S   +     Y  E S +K FA E  +K      V S + E        K  +  K GKE+  SQ   +TEGTV WREA Q YEVVE    KK+ E  +      +++   + G  +     A E QE +   K  +A   C+   ++ E  V +G HE  + K    A + S  Q+EH+ K K+ Q   E +  +K+ R   Q G+        DKYE+ +   + Q +ENEV   +K    N+  +    + +A ER           D  E T+K + + ++   +  EA  ++  +K +KE  ++   E +  +  E  +N+E+Q E  E            EQEE      V L+ + C++E+N  S+ E    E+  K+ +                    EQ +  + E++A E   +E+   +  E+ E EKRLKEA                                         WE++E  KR +EAR   ESEKR++   K +EI  RS EA  W K        GK E        +EQ+    +   L L+Q  +  M      DG +    + +  ++ NE+L++     +H     ++EV                      E +   V + L +      GI     +    +IG  D   ++  D + ++   GI     H ++    +EMASD E  N+ TH R E   +F  +Q    +F+Q E++++  + +V+++ VE+ RK G    A    ++N +      +   R+E +EK              ER+++ER+LE D LRK++    E EREREREKDRM V+  T EARERAFA+ RERAERAAVERATAE RQRA+AEARERLEKASAEARER +A+KAS +ARL+ ERAAVERATAEARERA+ K+  EKA++E++++VER + DKFSA  R+ G RQ SSS+ LQ+LQ QG+G S  L++S+SS  GG+EGESAQRCKARLER+QRTAERAAKALAEKNMRDL+A RE  ER+RLAESLDA+VKRWSSGKEGNLRALLSTLQYILGP+ GWQPIPLT+V+T+ AVKKAYRKATLCVHPDKLQQRGASI QKYI EKVFDLLKEAWNKFNSEER
Sbjct:    1 MENISHSISMKSY-NGNSLAARTVYDDVFGGPPTFGVPTLSPRVEDYAEIFGSFRATRASSIPILDLPVVDE---GDVSFNVGSSRFDYSDVFSGFNGLDFAVSYEELFDQSKGGDDSSEEAWSPAQSESLSDESDLSACSEKNLSLSNGDSYQSFDGVKQFNKSYCKANQRSNEDMSNGATHVTQLHAVPGFSFVVDEISPK--LEHESPPLQVTDDLNFSMDFNGRIMEGKQFRKTMSQPASSSFGIQTFGSDLKPLKGYGRTVSGPNGTFLKLSEISLRTEPSQLPPPSRPPPAFAVKDGDSGRQNSKLKASKSFAFERT-AGGSYPLVDVEVDASSSAAASAAAMKDAMEKAQAKLKSAKELMERKKEGLQSRMNMGFKNDIKDKEGEAGKIFDGSNSLNDERVQETYDLEYSGMKAFAGEGRQKVMKTAQVVSDSIEEGKYINVAKNTLEEKYGKEYRSSQSSQKTEGTVTWREAVQFYEVVETDKSKKVFEQAKGEKVLVNNTKFRECGQEKKSAMEAFEQQE-EGNRKVKTARDACEWKEKEIELKVAEGAHEWDEYKGRSEATKESCRQKEHKNKLKVTQKVCEQEQNEKKLRAGQQCGDIEKMVTEADKYEDCENLLEIQQKENEVDVKKKPKEINKRIKNEKRLKDAHER-----------DESERTLKETVEREKYEKRLTEAIERAENEKRQKEALKHEEKEKQEKEAREREKNEERQKEAGE-----------REQEEK-----VKLEKEACEREENEKSQQEACGREQEEKVKLQKEVREREENEKRRKEACEREQEEKVKLEKEAREREENEKTQKEARERKENEKRLKEALEQEENVKKQTEAYEREDNKKRLNEAHEREEKEKEKRVREVWEQEENKKRLQEARESEESEKRLKETIKHEEIEKRSEEATDWEKTENRFKYVGKWEVLKGRSNDREQIEMEKNKRKLKLDQEIHLHM------DGENSKASDWACKLDNNENLQVTQVASKHNKDSGQLEVTKEALSRQEGGMAWTELKDSEGESEAVGVENVLVKERFNSCGIAQDCTEHEKNKIGTEDAESLHVHDSVKKSAEDGIGIGQTHFERKKKASEMASDPEYPNVLTHERGERGTHFMEVQA---SFDQKESKNRLMSSQVLREHVESGRKMGAAQSAVLEGTRNAQKVAHKVKTGRRIERKEKNLNQILTAEEREKEERMKRERELEQDCLRKIQEREREMEREREREKDRMAVERTTNEARERAFAEARERAERAAVERATAEFRQRAMAEARERLEKASAEARERSLAEKASMEARLREERAAVERATAEARERAVGKSVIEKAAFEAQEQVERSIADKFSASLRDDGVRQGSSSSVLQDLQFQGVGFSSGLRYSYSSGDGGVEGESAQRCKARLERHQRTAERAAKALAEKNMRDLLAQRELAERNRLAESLDAEVKRWSSGKEGNLRALLSTLQYILGPDCGWQPIPLTEVLTSVAVKKAYRKATLCVHPDKLQQRGASIQQKYISEKVFDLLKEAWNKFNSEER 1501    
BLAST of DCAR_025958 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PAM3 ((Auxilin-like protein {ECO:0000313|EMBL:PSR88062.1}))

HSP 1 Score: 809.675 bits (2090), Expect = 0.000e+0
Identity = 624/1473 (42.36%), Postives = 868/1473 (58.93%), Query Frame = 0
 
Query:    1 METISPPLHKKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPV----QIERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFK---KDIGQRGEKNIKFDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEGKEDIH---SKQGKEHMQ---SQVPHETEGTVAWREATQLYEVVEEKKISEACRSAD------HSTSSDSGVGETGIATAVELQECQMQTKATSADHECQGNVEKFEVFKGGHEQVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSG--MERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQWQNTER-------------EEKASEEAASEERPNDLSEQDETEKR-------------LKEAWEKKEKWKRS------REARESEKRVELLFKEDEIMDRSSEANVWIKEGKGEGFIEHDIVQEQLMR-VVSDGILNLNQGNYTTMEEPKIFDGGSGHIHEPSVPVENESLEMEH-KTHERE-VEVNNEPQEAN-VNSNLDQNGLQYEGIN----DKNKDEPLCQIGITDMYNEDGI------DQTTGIHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERK----PGNVLPAKK---------FTSQNPEVEETNFQKKTRLEEREKE-RLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKASDARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNDLQNLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1391
            ME +S  + K++Y SGN    KT YDDVF  RPK  VPTLSPR EDY+EIF  FH+SR SSIP LDLP++ E    D+ FDVRSS FDYS+VFG  N  DF++ +E+L  QSK   DSS+E WTPAQSESLSDESDPS   E+++S+S+G  +QS +   QFNISY K     ++N+   M  VTQL ++PG++F++++T PS+++   + P      ++ N D  G + EG + RKT+S P  S+   Q   T+   + +   +    ++F+SVSD++LRTRPS LPPP RPPP+ A++  +S R  SK  ASKS+         S P+FDVE+DASSSAA S AA++DA+E AQ +L +AKE+MERK +GL++RTK   K   KD   +  K+I  D     K +       R  S ++T+  E  +       + S+  EG++ I+   +   K+H +   S+  ++TEG VAWR+A Q YEVVE  K S+    A          S   G G+   AT+  LQ+     +   AD E    V +++V KG     + KA + S  QE+H++K K+ Q     +   ++ R A Q G   +        E +++ T+ Q +ENEV   +K+    E  E      +  ER+  G  ++ T   +  E  +K +A   +   +  E+     K+ L++E  E    E +  +  E  +N+++  E  E      +L+E  EQEE+  RL +DL+ +E +K QN   E ++IEK     + + +N +R             +++A+E   SEERP    E++E EKR             L+EA E++E  K S      +E  E++K +E+    + + + S+E     ++ K     +   VQ +  R + SD    LN  +Y  ++  +        +    V     +L  E  +T + E +++N + +    VN +L++  + + G+      ++K++     G    +  D +      D  TG H+ +    +E AS+   +++ TH   E  R    ++     F   E +DK  + +VV++ +EN RK       VL  ++          TSQN E +E N       EEREKE R+++ER++E D LR+ EEE+EREREREKDRM VD AT EARER+F + RERAERAAVERATAEVRQR +AEAR+RLEKAS EAR            L+AERAAVERATAEARERA +KA AEKA +E+R+R+ER V DK S   + G  RQ SS +DLQ +Q QG+G S    +S+SSV GG+EGESAQRCKARLER++RTAERAAKALAEKNMRDL+A REQ ER+RLAE+L A+VKRWS+GKEGNLRALLSTLQYILGP+SGWQPIPLT+VIT+AAVKKAYRKATLCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:    1 MENLSHSVSKRAY-SGNGFGDKTLYDDVFGGRPKFGVPTLSPRVEDYAEIFGCFHSSRASSIPTLDLPSLAE---TDLSFDVRSSHFDYSQVFGGFNALDFSVSFEELLNQSKTRYDSSDEAWTPAQSESLSDESDPSAFLERSRSMSNGGSYQSCEAVNQFNISYDKVCQSSEENMSTGMAFVTQLHSVPGFTFVVNETPPSRNILGRNTPFLATDDLDPNVDLSGELREGNQFRKTMSYPANSNFAAQTLGTDPKPVRYGRSTSLTNESFVSVSDISLRTRPSQLPPPLRPPPVLAEKDADSDRQKSKLTASKSFSLGGMACDYSPPFFDVEVDASSSAAVSTAAMRDAMENAQAKLRSAKELMERK-EGLQSRTKLGLKYDAKDTNVKASKSI--DGSNCYKDERAHGSCQRACSPVETY--EGRQNVMKTTLLVSNPIEGEKHINVGKTSADKKHAKDSSSKESYKTEGPVAWRQAAQYYEVVETDKCSKIFEQAKDERLLVQKKSQFHGPGQERKATST-LQQQDEDHRKIKADWE----VREWDVNKG-----RSKATKESNRQEKHEKKVKVNQEACNQEENGRKPRIA-QNGNIENIPT-----EGNNL-TEVQRKENEVEIEKKLKEVCEGIEDGKPHKDGHEREDHGRRLKETGERERYEKRLKVAAKQAELEKRLKESLDLEEKENLQREACEREVREKRQKEARESEENEKRLKEAFEQDENKKRLKEGLEQEENEKRLKMDLERKENEKRQNLACERDEIEKRLVKDLRREENEKRLRGTFRLEVNGRDQKEANERKESEERPKKSCEREENEKRLDEAWEQNENTNKLQEAHEREESEKSSNEDFKPKEGHETQKGIEVAGHCEVLKECSTEYEQNERKLKS---AQRTHVQTEGERFIASDETCKLN--DYEDLQSGQA--ACKQDVENIKVKKNQRALSFEEDRTMKAESIDINGQVEAVEIVNVSLEEQPISF-GVALVDPQRDKNQIRKNDGTESPHQHDNVTGSVEADNGTGPHVNRHKTASETASNPLKSHVLTH---ELDRRGINVKEVDVMFENEETKDKLMSSQVVRELMENGRKIESDQTTVLEERRNVQSTAQKVSTSQNIERKEKNILTP---EEREKEDRIKREREMEMDRLRRREEEREREREREKDRMAVDRATLEARERSFGEARERAERAAVERATAEVRQRVMAEARDRLEKASMEAR------------LRAERAAVERATAEARERAFQKAMAEKAPFEARERIERSVADKSSGAYKGGALRQSSSLSDLQEVQCQGVGSSSGPIYSYSSVRGGVEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAEALHAEVKRWSNGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1421    
BLAST of DCAR_025958 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834LD75 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7130860.1}))

HSP 1 Score: 783.867 bits (2023), Expect = 0.000e+0
Identity = 616/1458 (42.25%), Postives = 849/1458 (58.23%), Query Frame = 0
 
Query:    8 LHKKSYRSGN-VAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQI----ERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEK-NIKFDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEGKEDIHS---------KQGKEHMQSQVPHETEGTVAWREATQLYEVVEEKKISEACRS-----ADHSTSSDSGVGETGIATAVE---LQECQMQTKATSADHECQGNVEKFEVFKGGHEQVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQP-----GETNDKANAVDKYENDDIGTQ---------DQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSE--AEKIEKGSKITIEQWQNTEREEKASE-EAASEERPNDLSEQDETEKRLKEAWEKKEKWKRSREA---RESEKRVELLFKEDEIMDRSSEANVWIKEGKG---EGFIE----------HDIVQEQLMRVVSDGILNLNQGNYTTMEEPKIFDGGSGHIHEPSVPVENESLEMEHKTHEREVEVNNEPQEANVNSN-LDQNGLQYEGINDKNKDEPLCQIGITDMYN--EDGIDQTTGIHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERKP-------------GNVLPAKKFTSQNPEVEETNFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNDLQNLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1391
            L KK+Y +GN     +  YDDVF   PK  +PTLSPR EDY+EIF  FHASR SSIP+LDLPA+  D + +  F+  SS FDYS+VF +SN  DFA+ +EQLF QS  + +S +E WTPAQSESLSDESDPS  SE+++SLS+G+ HQS D  K FNI Y+KA+   K++I   M H TQL A+PG++ I +   PS+       P  +      + D  G   EGK+ RKTVS    S  G   C+T+   + H   +     AF++V+D++LRT+PS LPPP RPPP+ A +  +S    +KFKASKS+    T    S P+ DVE+DASSSAA SAAA+KDA+E A+ +L + KE+ ERKK+GL++RTK     D   R EK + + D+      D     + R+ S +KTF+ +  K+      V S +T  KE+ H          K GK+++ SQV + +E +VAWR+A   Y +VE  K    CR+      D+  S ++           E   LQE +       AD E        E+  G  E  + KA++ S  QE+      + + G  C+  +K  +   QP      + ++    + + ++++ G +         +++E++E    QK     E  E+ ++     ER   G++       IE  +K + + ++   +  EA     K+K +KE  E   NE +  ++ E  +NK++  E  E +    +L+   E+EE+  +L +  +  E   E+  + +   ++IEK  K   +Q  + E++++A E E  S+ER     +++E EKRL EAWE+ EK +R +E     ESEKR++   + +EI  R   AN   +  KG    G++E            +  E   R++S      NQG +                    V  + E+L+  + T    VEV N   E   NS+ L ++  Q+E  N   K   +  + + D     E GID +  I I +   T+ +AS+    ++ +    E+  N   ++  +  F   E EDKF + +V  + VEN +K                 +P K  TSQ  + +  +       E+REK+   K R+LE D  RK+EEE+EREREREKDRM VD A  EARE AF + RERAERA +ERAT+EVRQR +AEARERLEKA  EARER +A+KAS +ARL+AERAAVER TAEARERA +KA  EKA++E+R+RV R V DK SA   NGG RQ +  +DLQ++Q QG+G SR+  +S SSV  G EGESAQRCKARLER+QRTAERAAKALAEKNMRDL+A +EQ E++RLAE+LDA+VKRWSSGKEGNLRALLSTLQYILGP+SGWQPIPLT+VIT+AAVKKAYRKATLCVHPDKLQQRGASI +KYICEKVFDLLKEAW+KFNSEER
Sbjct:    4 LSKKAYNNGNGFGDHQAVYDDVFRGPPKFGLPTLSPRVEDYAEIFGGFHASRASSIPILDLPAL--DHEANFSFE-ESSHFDYSQVFSASNACDFAVTFEQLFNQS--NKNSCDEAWTPAQSESLSDESDPSAGSERSRSLSNGESHQSSDGIKHFNILYNKASQGSKEDISTGMAHRTQLLAVPGFTCIFNGNPPSQKKGDRDTPFLVTDVLNPSVDFSGRTREGKQFRKTVSHQATSSFGTTACRTDLKPVRHGRSASCMDGAFVTVTDISLRTQPSQLPPPLRPPPVIAAKDGDSETQKAKFKASKSFSLGETAGDSSPPFLDVEVDASSSAAVSAAAMKDAMENAEAKLKSVKELAERKKEGLQSRTKLGLHNDAKYRKEKPSREIDVSNCFNEDRALGTFQRDCSGMKTFSGDERKELMMTTLVDSDST--KEERHKNLAKISADKKHGKDNL-SQVRNGSEASVAWRQAHN-YRLVETDK----CRNNFDPVEDYRVSMENAPFHEPRQEQKEPAALQEQEDDNTQIRADREA------LELDDGKEE--RSKASKESSRQEKQGTNVNMHEEG--CEQEEKGKQSVAQPKIPVEADKSEVCENLAQVKHNEHGVKVERKLKEATEKIEDDET---QKDCCEREENERRLKETLERERYEKGLKEATERAEIEKRLKEALNQEEREKQQGEACESKNKEKRQKEAREREENEKRSNESLEQEENKKRFKEALEREDTAKKLKMALEEEENEKQLKLARERDE--NEERLLDDHRRQEIEKKLKGAYQQGGDGEKQKEAHEREEKSKERLPVAYKREENEKRLTEAWEQDEKERRLQEVCEREESEKRLKEDLEHEEIDKRPEGANQCEETLKGIEVAGYLEEFKGCSNDHEQHVKDENGRRLIS------NQGTF--------------------VNAKLETLKASNVT----VEVVNVLTEEQSNSSGLAEDDPQHEK-NQTRKKYSMESLHLHDSVKSVEAGID-SKPIQIDRDEKTSGIASNNGKPHVLSSQPGESGPN---VEEVEVMFEMEETEDKFMSSQVATELVENGKKMRADQTAVLEEKINAQRIPQKASTSQYIKRKGKSLSNILAPEKREKQDSMK-RELEEDCQRKIEEEREREREREKDRMAVDRAGPEARESAFVEARERAERAILERATSEVRQRVMAEARERLEKAHTEARERSLAEKASVEARLRAERAAVERVTAEARERAFQKAMNEKATFEARERVGRSVADKASASCNNGGIRQNTLFSDLQDMQCQGVGFSRN-SYSSSSVHCGFEGESAQRCKARLERHQRTAERAAKALAEKNMRDLLALKEQTEKNRLAEALDAEVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQKKYICEKVFDLLKEAWHKFNSEER 1396    
BLAST of DCAR_025958 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7SPB0 (J domain-containing protein {ECO:0000259|PROSITE:PS50076})

HSP 1 Score: 748.814 bits (1932), Expect = 0.000e+0
Identity = 636/1491 (42.66%), Postives = 867/1491 (58.15%), Query Frame = 0
 
Query:   15 SGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPV----QIERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERT----NAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQR-GEKNIKFDMLKSSK--GDIFSPK-YAREGS--EIKT---FAEENEKKARNMIHVASSATEGKEDIHSKQGKEHMQSQVPHETEGTVAWREATQLYEVVEEKKISEACRSADHSTSSDSGVGETGIA---TAVELQECQMQT-KATSADHECQGNVEKFEVFKGGHEQVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGS--GMERTASFDSIENTIKFSAD-------VKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQWQNTEREEKASEEAASEERPNDLSEQDETEKRLKEAW----------------EKKEKWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGKGEGFIEHDIVQEQLMRVVSDGILNLN-------QGNYTTMEEPKIFDGGSGHIHEPSVPVENESLEMEHKTHEREVEVNNEPQEANVNSNLDQNGLQYEGINDKNKDEPLCQIGITDMYNEDGI--------------DQTTG----------------------IHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERK-----------PGNVLPAKKFTS--QNPEVEETNFQKKTRLEEREKERLEKERDLE-NDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNDLQNLQHQGMGPSRDLKHSHSSVSG---------GLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1391
            +GN  + ++ YDDVF   PK  VPT+SPR EDY+EIF  FHASR SSIPVLDLPAV E    DV+FDV+    DYS++FG   G DFA+ Y++L  QSK  +DSS E WTPA++ SLS+ESD SG   KN+S+S GD HQS+DD K FNIS+HKAN + K ++ +   HVTQLDA+PGY+ ++ D +P +    E+ P+     I  +   GG   E K L KT+S P  S+ G+   + E  V  + +      + FI+VS+++LRT+PS +PPP RPPP+   +  +SSR  S+ KA+K+Y FE T    + G S P+FDVE+DASSSAAASAAA+K+A+E+AQ +L NAKE+MER+K+GL++RTK   + D   + G+ +   + LK  K  G   +PK + RE S  E+KT    ++  E +A   ++VA  + EG+       GKE   SQ  ++TEGT  W+EAT+ YE+V   K  +   + +     +  V E+       A+E  E Q ++ K T+A  E  G  E                A+ +   EEH EK ++A +    +  +K  R  ++  E   K N  D++E  DI  + Q ++NEV   + +   NE      ++ EA ER G+   +++    +  E  +K + +       +K E  K  EA +    +K +KE  E   NE +     +  +N++KQ E  E +    +L++  EQEE+  RL   LK ++  K+Q    E E+ +K  K  +E       EE   ++ A E+R  +  E++E EK+LK+A                 E K +  ++ E +ESEKR+E + + +E   R  EA   ++E +       D+ + + ++   D I+N N       QG Y  MEE            E     EN++++      + EV      QEA       +   + +GI+   K   +  I + +++   G+              D +TG                       H++K     +MAS+ E+  +  +   E     K ++    +F   +++DKF   +V+K+ VEN +K            GN+    +  S  Q+ E +E N  +   LEERE+E   K       D LRKLEEE+EREREREKDRM VD ATREAR+RA+ + RERAERAAVE+ATAE RQRAL EARERLEKA AEARE+ ++DK S +ARL+AERAAVERATAEARERA EKA AEKA  ++R+R+ER V+DKFSA SRN G RQ SSS+DLQ+        SR   + +SSV G         G+EGESAQRCKARLERY+RTA+RAAKALAEKN RDL+A REQ ER+RLAE+LDADVKRWSSGKEGNLRALLSTLQYILGP+SGWQPIPLTDVITA AVKKAYRKATLCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:   21 NGNGFSDRSAYDDVFGGPPKFGVPTISPRVEDYTEIFGSFHASRASSIPVLDLPAVDE---ADVFFDVQE--VDYSDIFGGFRGLDFAVSYDELLGQSKDGDDSSEEAWTPAETGSLSEESDYSG---KNESMSYGDAHQSFDDGKDFNISFHKANQRSKGDMSNG-AHVTQLDAVPGYTVVV-DGTPLQKTNYENPPLWVTGDISLSRSFGGGKIEEKHLWKTMSYPQNSNDGMHTFEIEPQV-GYGENGSHSSETFITVSEISLRTQPSPVPPPLRPPPIVDVKKGDSSRSASQLKANKNYAFEGTAGGSSPGSSPPFFDVEVDASSSAAASAAAMKEAMEKAQAKLKNAKEIMERRKEGLQSRTKLGSRNDTKHKEGKLSSISNSLKDEKVQGSCETPKDFVREASQKEMKTTQVLSDSREGEA--FLNVAKKSAEGR------HGKESWSSQESYKTEGTGKWKEATEFYELVRGDKFRKEQANNEKVLVKNKKVIESRQKEKRAAIESFEQQEESDKKTNAAQEAHGWEEN--------------EAKEACRHEEH-EKVEVAHVLCGWKENEKTWRVGMEHEEAEHKLNVADEWEEHDILIEIQQKQNEVEVKEAMKQENER-----KLKEAKERTGNERKLKKARENEKSEKRLKEALEQEETEKKLKAENEKRLEALKWQENEKKKKEAREREENERRLKVALDWEENEKKQKEACEREENEKRLKQAIEQEENEKRLKEALKQEQILKKQKEACEREENDKRLKEALEH------EENEKKQKAHEKRLKEACEREEIEKKLKDAREREEIEKRRKDVHRQAEDKRRLNKTHERKESEKRLEEMPEWEETDKRLKEATK-LEESEKRPGDSGDVEELKGLKKAHDQIVNENEKKLKSCQGTYAQMEENNF-----KATDEACKLHENKNIQAAQVAPKYEVNSLEANQEALGQEEKLKIAAESQGIHKDFKAVEMENILVEEIFEASGMADGDAEQEKNKIRMDNSTGSVLLDENVKKSLEAGIGIGIGQAHLEKNLRAAQMASNPED--LKKNFTSEWGEGEKSMKQTSVSFEPEDSKDKFRPSQVLKEWVENGKKVEAAQTATLEGKGNIQKTAQQVSNGQSTEKKEKNINETPTLEEREREERMKRERELEKDRLRKLEEEREREREREKDRMAVDRATREARDRAYVEARERAERAAVEKATAEARQRALTEARERLEKACAEAREKTLSDKTSIEARLRAERAAVERATAEARERAFEKAMAEKAVSDARERMERSVSDKFSASSRNSGLRQSSSSSDLQSQSTGSSSGSR---YPYSSVYGASYNTEKSEGVEGESAQRCKARLERYRRTADRAAKALAEKNKRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTDVITAVAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1455    
BLAST of DCAR_025958 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061DH07 ((Chaperone DnaJ-domain superfamily protein, putative isoform 1 {ECO:0000313|EMBL:EOX91036.1}))

HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0
Identity = 604/1508 (40.05%), Postives = 835/1508 (55.37%), Query Frame = 0
 
Query:   20 AGKTPYDDVFAARPKVKV--PTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQS------KADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQIERNTDC--GGAVTEGKRLRKTVSQPPISDIGLQGCKTEASV-LAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGD-SQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEKNIK-FDMLKSSKGDIFSPKYAREGSEI-KTFAEENEKKARNMIHVASSATEG-------KEDIHSKQGKEHMQSQVPHETEGTVAWREATQLYEVVEEKKISEACRSADHSTSSDSGVGETGIATAVELQECQMQTKATSADHECQGNVE-------KFEVFKGGHEQVKI----KAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQ----DQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEV--------------------------FEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQWQNTEREEKASEEAASEERPNDLSEQDETE-------------KRLKEAWEKKEKWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGKGEGFIEHDIVQEQLMRVVSDGILNLNQGNYTT-----MEEPKIFDGGSGHIH--EPSVPVENESLEMEHKTHEREVEVNNEPQ----EANVNSNLDQNGLQYEGIND-KNKDEPLCQIGITDMYN---------------------------EDGIDQT--TGIHI-----KKTSGTNEMASDIENANIS-THTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERKP----GNVLPAKKFT---------SQNPEVEETNFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKASDARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNDLQNLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1391
            +GKT YDDVF   P+     PTLSPR EDY+EIF  FHASRG+SIPVLDLP V  D+  +V FDVR+  F+Y+EVFG  +G DFA  YE+L +Q+        D DSS E W  A++ESLS+ SD SG   K Q  S+GD ++  D + +FNISYHKAN +   ++ + +THV QL A P Y+++I   +P +  +  + P+ +  + D      VT+ K LRKT+S P     G     T  S+   +     S  + F+++S++NLRT PS +PPPSRPPPL     +N    N +  AS   +      GD S P+FDVEID+SS+AAASAAA+K+A+++AQ +L +AKE++ERK++G++N TK   K +   + E+  K        K +     Y +E   I ++  EE +K  +     A  + EG       K  +  K GKE        + +    W+EATQ +E+V     ++  R     T++D  + ++       +Q  ++Q KA     E  G +E       K E  +  HE  K+    K A+ S  + E    SK A+     +  +K+ + A +     +   ++   +    G +    D+LE+ E     K V A +   KV E+  A E K +G +   +  SIEN  +             E +++    K  +EVFE   NE+K     +  +N+++  E  E + K  +L+E                            EQ E+  RL      +  ++ Q    E E++EK  +   E+ ++  R E+ +E+   E +  ++ +++ETE             K LKEA EK+E  KR +EA E E  +E + KE      + E   + K  K     E ++ Q+ + +V ++ +  +N  +  T      ++ KI +G   H+   +P V  E   L+   K  E ++  NN+      E    S L++NG +     D + K E + +  +   +N                           +DG+ +    GI I     +K +    M SD  N  +   +  RE  RN K  Q   H     EN+DKF + + VK+SVE  RKP     +VL  K  T         SQ+ E  + N       EE+E ERL++ER+LE + LRK+EEE+EREREREKDRM VD A  EARER + +TRERA RAAVERATAE RQRA+AEAR+RLEKA AEARE+     + +ARL+AERAAVERATAEARERA+EKA AE+A++E+R+RVER ++DKFS  SRN G R  +SS+DLQ+   Q  G    L++ +SS   G+EGESAQRCKARLERY+RTAERAAKAL EKNMRDLIA REQ ER+RLAE+LDADVKRWSSGKEGNLRALLSTLQYILGP+SGW PIPLT+VIT+AAVKKAYRKATLCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:   33 SGKTMYDDVFGGPPRFGTGGPTLSPRPEDYTEIFGGFHASRGASIPVLDLPLV--DDSDEVMFDVRNPRFNYAEVFGGFDGLDFAASYEELMRQANGGGDHDRDGDSSEEAWMQAETESLSEGSDHSG---KYQYFSNGDYYEQIDSSMEFNISYHKANLRRNRDMSNGVTHVAQLHADPEYAYVIE--TPLQKTDNLNPPLHVTDDIDLEFTSRVTKKKHLRKTLSHPSNWTAGGGQTFTNDSIQREYRRNGSSSNEMFVTISEINLRTLPSDVPPPSRPPPLVD--VKNGDYENGQTAASGGRM------GDGSPPFFDVEIDSSSAAAASAAAMKEAMDKAQAKLKSAKELLERKREGIKNSTKPGSKSNGKGKKERASKAVHGFSDIKDERLQGIYEKEDGGIERSVREERQKGVKTQ---APISLEGEKIFNVPKRFVVEKHGKESQSILEVDDIDAADEWQEATQFFELVR----TDKSRMGFEQTNNDKVLMQS-------MQSNELQHKAKK---ESIGALELQLDSDNKVEAVREDHELEKVERDMKTAKESCERGEPTGISKAAKEARRHKGHEKKVKEAQEVSVLEENGQSITARKPLRNGKKPTGADELEQRE-----KRVNAQQKEIKV-EVGLAMELKENGQQEKETSKSIENAKRV------------EESQEREGQKRWREVFEQEKNETK----CKQAENEKRLSEALEQEEKEKRLKEAREREEIKKKEKEACELEESEKIWRMALEQIENEKRLKQAHMQEVNERRQRKALEQEEMEKKQREVHEKEESKRRLEQVTEQGKEERQQKEVIQREETENKIKEACEKVAIDKGLKEACEKEETAKRLKEAHEKEN-IEKMLKE------AVEQKDYSKPVKEAQDTEDEVKQKVVEQVETEEVQGVNCVHQHTERVENGKKLKIAEGTHQHVEGEDPVVSDEVNKLDCGKKHQENQLVGNNDQNCDELEQTEESRLEENGKKEAEFRDGEKKSEAMGKGNVDGKFNASEMAPGDLEVKVNQFRKDEVSDLCHQDDGVKKAGEAGIGIGQRNAEKINSVPGMDSDNNNQGLKFAYEWRERARNNKEAQVPSHL---EENKDKFVSAQSVKESVETGRKPEVAKSSVLEGKGSTQRTVQQVKISQSTERRDKNINDSLTPEEKEAERLKRERELEMERLRKMEEEREREREREKDRMAVDRAALEARERGYVETRERAARAAVERATAEARQRAMAEARDRLEKACAEAREK----SSMEARLRAERAAVERATAEARERAVEKAMAERAAFEARERVERSMSDKFSTSSRNSGMRTSTSSSDLQDQHFQSTGSFGGLRYPYSSAYNGVEGESAQRCKARLERYRRTAERAAKALEEKNMRDLIAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1472    
BLAST of DCAR_025958 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4ENL0 ((auxilin-like protein 1 {ECO:0000313|RefSeq:XP_018820978.1}))

HSP 1 Score: 672.544 bits (1734), Expect = 0.000e+0
Identity = 598/1523 (39.26%), Postives = 810/1523 (53.18%), Query Frame = 0
 
Query:    5 SPPLH-KKSYRSGNVAAGKTPYDDVFAARPKVKVPTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQL-FQQSKA-DNDSSN-EVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQIERN----TDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRS-PGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQR-GEKNIKFDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEG-------KEDIHSKQGKEHMQSQVPHETEGTVAWREATQLYEVVEEKKISEACRSADH-------STSSDSGVGETGIATAVELQECQMQTKATSA------DHECQGNVEK--------------FEVFKGGHEQVKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYEN--DDIGTQDQLEENEVIFI-------QKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENTIKFSADVKQERGKFNEATRQSAKD-KLEKEVFENHGNESKHVK--TYEMGQNKEKQDEVAECKGKTNQLEEVFEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQ----------------------WQNTEREEKASEEAASEERP-NDLSEQDETEKRLKEAWEKKEKWKRSREARESEKRVELLFKEDEIMDRSSEANVW------IKEGKGEGFIEHDIVQEQLMRVVSDGILNLNQGNYTT--MEEPKIFDGG-----SGHIHEPSVPVEN-------------------ESLEMEHKTHEREVEV--NNEPQEANV--NSNLDQNGLQYE----GINDKNKDEPLCQIGITDMYNEDG--IDQTTGIHIKKTSGTNEMASDIENANISTHTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERK-----------PGNVLPAKKFTS--QNPEVEETNFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS-DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNDLQNLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1391
            + P H  K+   G   A K  +DDV+   PK  V TLSPR EDYSEIFE FH+SR SSIPVLDLPAV E E   V+FDVRSS  DY+EVF   +G D A+ YE L F Q K  D DSS+ E WTPA S  LS++SD S   EKN   S+GD  Q +D   +  +SYHKAN     ++    THVT+LDA+PG +F++ +    +  + E+  +Q+  +     D    + +GK  +KT+SQP       Q  + +        +S S   + F++VSD++LRT+PS LPPPSRPPP      E S RL S    SKS   E ++   S P+FDVE+DASSSAAA    +K+A+ +AQ +L +AKE MERK +G +   K   K  I  + G+ +   D   + + D       RE + +K    E  +K R +      + EG       K+    K  KE+  S  P + EG+  W+EA Q  E+V   K   A   + H       + + + G  +       ELQE +   K  SA      ++E +  VE               FEV     E  + KAA+    + +H++K K AQ+  E    +K+ R A +  ET +K+      EN  D +  Q +  ++EV          QK+  AN+  E+   I     ++ +   +  +F+  EN           RG  +E     A+D K  KE  E+ G+E K +K    E  +N++ + E  + + + + L+E  EQEE    L   ++ +E  K    + E E  EK  K  +E+                      +Q TE E++  +  A EE+     SEQ++  ++LK A E  +  +RS+E           F+ +EI   S+EA++W      +K+  G+       VQEQ  R  +   LNL +G      +E+  + DG      S ++  P +  ++                   E  E E K  E++ EV  N +   A+    S++ Q  L  +     + D  K  PL   G      E G  + QT   HI K+    + +  I       H   E   N K  QP     NQ E++D+    +V K  VEN +K            GN+  A    +  Q  E +E    + +  E++E ER+++ER+LE D LRK+EEE+EREREREKDRM VD  T E RERA+ + R++AERAAVERA        +AEARERLEKA AEARE+  ++KA+ +ARL+AERAAVERAT EARERA+E+  AEKA++  R+RVER V+DKF A  RN   +Q SS            G +   + S      G+EGES QRCKARLERYQRT ERAAKALAEKNMRDL+A REQ ER+RLAE+LDADV+RWSSGKEGNLRALLSTLQYILGP SGWQPIPLT+VITAA+VKKAYRKATLCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:   15 AAPTHANKTVNYGGFEA-KALFDDVYGGPPKFGVSTLSPRAEDYSEIFESFHSSRASSIPVLDLPAVDESE---VFFDVRSSSLDYAEVFRDFDGLDCAVSYEDLLFDQYKGGDRDSSDDEAWTPAGSGYLSEDSDHS---EKNHCFSNGDFCQPFDSDAE--MSYHKANQTSSKDMCSGATHVTELDAVPGCTFVLEEIDRLQKTD-ENPILQMTDDDNLSMDFSEGMMKGKHRKKTMSQPFNDSTCRQTFRNDLKPEKAYARSGSLSNEMFVTVSDISLRTQPSQLPPPSRPPPSTDVTKEVSRRLTSN---SKSIASEGSDGDSSPPFFDVEVDASSSAAA----MKEAMMKAQVKLRSAKEFMERK-EGFQGSAKMGSKNHITDKEGKVSKIVDECDNLRNDRVQSTCNREDNSMKFSVREEIQKVRKVAQDVPDSMEGEKLLQAAKKSAEKKHSKEYWSSLGPVKIEGSSDWKEAFQSIELVRTVKSGNALEQSSHIEISVHNAKTHEQGCEKDADLGLFELQE-EENKKVMSAIGKHDLEYEKKSKVENEVWEGEEKGEEEYSFEVL---GENERSKAAK----EAQHKKKVKEAQVVFEKLKNEKKVRIAQKHTETENKSTGAGVSENCNDLLEVQKEKYKSEVEQAMNHKENEQKLKEANKRMEREELIRGLCGKEDNEKRKNKTFEVDENV----------RG--HEELLDGAEDAKNVKEALEHKGSE-KRLKQEANERDENQKNKKEACKTQERESILKEALEQEEKTKLLQNIVEQEEKTKLLQNIVEREVHEKRLKEGLEEKDDEKQREFHKGEKKEKKQQETYQITENEKRLKDACAKEEKNLYGASEQEDKSEKLKGAQEGSDCGRRSKEG----------FELEEIEKESTEASIWKESEKRLKDAGGKELKGLSEVQEQSERDENGKTLNLAEGTCVRKELEDLGVSDGAWNLDDSENLQAPKLASKDNENGGKLEETQESLAHEQKEKTESEQKDKEKDTEVVENADAPAADKFEASDIAQGDLGLKEDQSRMEDATKSPPL--DGNAKKVGEPGFGVRQT---HIYKSVFQVD-SFPINQERKIVHELGERGNNVKQAQP---VLNQEESKDRSLPTQVRKDWVENGKKIEAARPAVLEVKGNIQKAAPHVNARQTRERQEKKLNETSTSEDKEMERVKRERELEMDRLRKMEEEREREREREKDRMAVDRKTLETRERAYTEARDKAERAAVERA--------MAEARERLEKACAEAREKTFSEKATVEARLRAERAAVERATTEARERAVERTMAEKAAFGMRERVERSVSDKFPASVRNNELKQSSS--------FSCYGAAYPTEQSE-----GVEGESPQRCKARLERYQRTTERAAKALAEKNMRDLLAQREQAERNRLAETLDADVRRWSSGKEGNLRALLSTLQYILGPESGWQPIPLTEVITAASVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1458    
BLAST of DCAR_025958 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4U5PUX1 ((Trichohyalin-related family protein {ECO:0000313|EMBL:TKS00207.1}))

HSP 1 Score: 669.078 bits (1725), Expect = 0.000e+0
Identity = 594/1500 (39.60%), Postives = 815/1500 (54.33%), Query Frame = 0
 
Query:   22 KTPYDDVFAARPKV-KVPTLSPRDEDYSEIFEVFHASRG--SSIPVLDLPAVGEDEDPDVYFDVRS-SGFDYSEVFGSSNG--FDFALYEQLFQQSKADNDSSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQI----ERNTDCGGAVTEGKRLRKTVSQPPISDIGLQGCKTEASVLAHNDKSRS---PGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQPYFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEKNIKFDMLKSSKGDIFSPKYAREGSEIKTFAEENEKKARNMIHVASSATEGKEDIHS-------KQGKEHMQSQVPHETEGTVAWREATQLYEVVEE---KKISEACRSADHSTSSDSGVGETG-----IATAV--ELQECQMQTKATSADHECQGNVEKFEVFKGGHEQ--------------------VKIKAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPGETNDKANAVDKYENDDIGTQDQLEENEVIFIQKIVGANESYEKVIEIMEAPE------RKGSGMERT--ASFDSIENTIKFSADVKQ---ERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEVFEQEES---NNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQWQNTEREEKASEEAASEERPNDLSEQDETEKRLKEAWEKKEKWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGK------GE----GFIEHDIVQEQLMRVVSDGILNLNQGNYTTMEEPKIFD--GGSGHIHEPSVPV-ENESL-------EMEHKTHEREV-------EVNNEP-------QEANVN------------SNLDQNGLQYEGINDKNKDEPLCQI-GITDMYNEDGIDQTTG-IHIKKTSGTNEMASDIENANIS-THTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERK-----PGNVLPAKKFT---SQNPEVEE---TNFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKAS--DARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNDLQNLQHQGMGPSRDLKHSHSSV----SGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1391
            KT YDDVF+A P+    PTLSPR EDY EIF  FHA RG  SSIPVLDLP V  +   DV+FDVRS SGFDY+EVFG  N   FD +  E + + S   + SS+E WTP   E LS+ESD S    KNQ LS+GD H+S D + +FNISYHKA+     ++ + +THVT+L  +PGY+F++  +      + E  P+ +      N D  G +   K+LRKT+S P  ++    G      V  H +  R+   P + F++VSDVNL+T PS LPPPSRPPP F  +  + S+     +   S     +    S PYFDVE+DASSSAAASAAA+K+A+E+AQ +L +AKE+MERK+DG ++RTKS  K D   R  +  K D + SSK      KY     E +   E +  + R  I +  S  EGK   ++       K G+E + SQ     +    W+EATQ +E+V     +K++E+ ++ D+    +  + E G      AT    + QE   + +  +ADHE +   +  +V K  H+                     +K++ AQ  +++ E +E+ ++       Q +  E R          +AN   K+EN      +   E   I +++  G  E      E + + E      RK  G ER   ++F+  EN     A ++Q   ER +  EA +Q  K++   E       E K  + YE  + +++     E +    +L+E F +EE+     RLG     +E ++ Q  V E E+ EK  K  +E+ QN  R  +  +   +E+RP +  E  E +K+ KEA E++   K+S+E  E+E  +E   +++    R  E N  ++ GK      GE    G  E + + +    + + G + +   + +  +E  +    GG+  + + +    EN +L       + E K  ++EV       E++  P       +EA V             S +DQ  L++E      +D+    + G   M         TG + I+KT    ++ SD  N        R E R+N     P     NQ + +D F +    KKS+   RK     P + L AK  T   +Q   V E    N  K    EE+E ERL +E++LE + LRK+EEE+EREREREKDRM VD A  EARER   +  +RAERAAVERA        + EARERLEKA  EARE+ +AD  +  +ARL+ ERAAVERATAE RERA  K  +E+ ++E+R+RVER V+DKFSA SRNGG                 MGPS      + S     S G+EGES QRCKARLER++RTAERAAKALAEKN RDL+A REQ ER+RLAE+LDADVKRWSSGKEGNLRALLSTLQYILGP+SGWQPIPLT+VIT+AAVKK YRKATLCVHPDKLQQRGAS+ QKYICEKVFDLLKEAWNKFNSEER
Sbjct:   23 KTVYDDVFSAPPRFGAAPTLSPRVEDYGEIFGAFHAPRGASSSIPVLDLPLVDNEAAEDVFFDVRSCSGFDYNEVFGGFNASDFDVSFEELMMEHSNGRDFSSDEAWTPEDPEYLSEESDNSA---KNQCLSNGDSHESIDGSMEFNISYHKASQSSNKDMTNGITHVTKLFDVPGYAFMVDKSMSLPKTDNEYPPLHVSDDGHLNIDFMGEMMGEKKLRKTMSHP--ANGSADGLVFGNEVRPHKEYVRNVSLPNETFVTVSDVNLKTYPSQLPPPSRPPPAFDFKKRDFSKSTPNCQGVAS---SGSAGDSSPPYFDVEVDASSSAAASAAAIKEAMEKAQAKLKSAKELMERKRDGFQSRTKSGSKNDRKDREGRVSKNDDVSSSK------KYEEGTCERENKIEFSVMEERKKIRIPDS-VEGKRHRNAAEKSSDEKHGRESLSSQGSDRIDEAGEWKEATQFFELVRTNVPRKVTESEKN-DNILLQNINIHEQGQKVKKAATEAMQQQQENGKEVQTFTADHELEEYAKNPKVSKPAHDHGGSNGRSEAAKVSHGEKGLAMKVQVAQ-EVFRVEDEERFRM-----NLQSIGTEKR--------QTRANGSQKHEN----VVEVPREQSKIEVRQTAGDKEKGPWPKEAIRSVENEKQLIRKKDGGERRGRSTFEQEENEKMLKAPLEQMENER-RLKEALKQGEKERRINEACVREETEKKQREAYEKEEKEKRLRAALEWEENERKLKEAFVKEENARYERRLGEATDREENERRQREVREREENEKRLKEALEKEQNEGRLREFCQSEENEKRPKEALEH-ENKKKQKEANEREGSEKQSKEVFENEG-IEETLEQEANEKRLEETNELVESGKLREALEGEASELGTCEPEEIGDASQEICNLGNIEVTLKDVSENDELGVLHEMGGNCRVAKQACETDENRNLGSTRLVGKHEGKNRKQEVTGENAHEEISKVPPGLKIGNKEATVETVNVQVDRQTKVSGVDQGNLEHEKNQSIVEDDAAASVYGDERMRKAGEAGNGTGQMSIEKTKKAFQIESDTANQGKEFAQDRGERRKNM----PQAVVMNQEDRKDNFMSTGAEKKSIVTGRKIEAAQPAD-LEAKGSTLGSTQQFNVSERKMKNLNKTLSPEEKEAERLRREKELEMECLRKMEEEREREREREKDRMAVDRAVLEARERVHTEACDRAERAAVERA--------ITEARERLEKACVEAREKSLADNKTYLEARLR-ERAAVERATAEVRERAFGKVMSERTAFETRERVERSVSDKFSASSRNGG-----------------MGPSSSSSVYNGSYYMERSEGVEGESPQRCKARLERHRRTAERAAKALAEKNTRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTEVITSAAVKKVYRKATLCVHPDKLQQRGASLQQKYICEKVFDLLKEAWNKFNSEER 1454    
BLAST of DCAR_025958 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1BN47 ((auxilin-like protein 1 isoform X1 {ECO:0000313|RefSeq:XP_021300856.1}))

HSP 1 Score: 663.685 bits (1711), Expect = 0.000e+0
Identity = 604/1506 (40.11%), Postives = 836/1506 (55.51%), Query Frame = 0
 
Query:   20 AGKTPYDDVFAARPKVKV--PTLSPRDEDYSEIFEVFHASRGSSIPVLDLPAVGEDEDPDVYFDVRSSGFDYSEVFGSSNGFDFAL-YEQLFQQSKADND------SSNEVWTPAQSESLSDESDPSGCSEKNQSLSSGDIHQSYDDTKQFNISYHKANPKGKDNILDAMTHVTQLDAIPGYSFIISDTSPSKHVEVESLPVQIERNTDC--GGAVTEGKRLRKTVSQPP-ISDIGLQGCKTEASVLAHNDKSRSPGKAFISVSDVNLRTRPSHLPPPSRPPPLFADRAENSSRLNSKFKASKSYVFERTNAGDSQP-YFDVEIDASSSAAASAAAVKDAVERAQEQLSNAKEMMERKKDGLENRTKSHFKKDIGQRGEKNIKFDMLKSS-KGDIFSPKYARE-GSEIKTFAEENEKKARNMIHVASSATE----GKEDIHSKQGKEHMQSQVPHETEGTVAWREATQLYEVVEEKKISEACRSADHSTSSDSGVGETGIATAVELQECQMQTKATS---ADHECQGNVEK-FEVFKGGHEQVKI----KAAQGSIWQEEHQEKSKLAQMGDECQHMDKETRGALQPG--ETNDKANAVDK-YENDDIGT-QDQLEENEVIFIQKIVGANESYEKVIEIMEAPERKGSGMERTASFDSIENTIKFSADVKQERGKFNEATRQSAKDKLEKEVFENHGNESKHVKTYEMGQNKEKQDEVAECKGKTNQLEEV--------------------------FEQEESNNRLGVDLKWQECKKEQNFVSEAEKIEKGSKITIEQWQNTEREEKASEEAASEERPNDLSEQDETE-------------KRLKEAWEKKEKWKRSREARESEKRVELLFKEDEIMDRSSEANVWIKEGKGEGFIEHDIVQEQLMRVVSDGILNLNQGNYTTMEEP---------KIFDGGSGHIH--EPSVPVENESLEMEHKTHEREVEVNNEPQ----EANVNSNLDQNG-LQYEGINDKNKDEPLCQIGITDMYN---------------------------EDGIDQT--TGIHI-----KKTSGTNEMASDIENANIS-THTRREARRNFKGIQPDQHAFNQAENEDKFTAPRVVKKSVENERKP----GNVLPAKKFT---------SQNPEVEETNFQKKTRLEEREKERLEKERDLENDFLRKLEEEKEREREREKDRMGVDTATREARERAFADTRERAERAAVERATAEVRQRALAEARERLEKASAEARERLIADKASDARLKAERAAVERATAEARERAIEKAKAEKASYESRDRVERPVTDKFSAYSRNGGFRQCSSSNDLQNLQHQGMGPSRDLKHSHSSVSGGLEGESAQRCKARLERYQRTAERAAKALAEKNMRDLIAHREQIERSRLAESLDADVKRWSSGKEGNLRALLSTLQYILGPNSGWQPIPLTDVITAAAVKKAYRKATLCVHPDKLQQRGASIHQKYICEKVFDLLKEAWNKFNSEER 1391
            +GKT YDDVF   P+     PTLSPR EDY+EIF  FHASRG+SIPVLDLP V  D+  +V FDVR+  F+Y+EVFG  +G DFA  YE+L +Q+    D      SS E W  A++ESLS+ SD SG   K Q  S+GD ++  D + +FN+SYHKAN +   ++ + +THV QL A P Y+++I   +P +  +  + P+ +  + D      VT+ K LRKTVS P   +  G Q    +A+   +     S  + F+++S++NLRT PS +PPPSRPPPL     +N    N +  AS   +      GDS P +FDVEID+SS+AAASAAA+K+A+++AQ +L +AKE++ERK++G++N TK   K D   + E+  K     S  K +     Y +E G   ++  EE +K  +    ++  A +     K  +    GKE   +    + +G   W+EATQ +E+V     ++  R     T++D  + ++       +Q  ++Q KA +      E Q + +K  E  +  HE  K+    K A+ S  + E    SK A+     +  +K+ + A +    E N ++ A  K   N    T  D+LE+ E     K V A +   KV E+  A E K +G +   +  SIEN  +             E +++    K  +EVFE   NE+K     +  +N+++  E  E + K  +L+E                            EQ E+  RL      +  ++ Q    E E++EK  +   E+ ++  R E+ +E    E +  ++ +++ETE             K LKEA EK+E  KR +E RE E  +E + KE      + E   + K  K     E ++ Q    +VV        QG     + P         KI +G   H+   +P V  E   L+   K  E ++  NN+      E    S L+++G L+ E  + + + E + +  +   +N                           +DG+ +    GI I     +K +    M SD  N  +   +  RE  RN K  Q   H     EN+DK  + + VK+SVE  RKP     +VL  K  T         SQ+ E  + N       EE++ ERL+++R+LE + LRK+EEE+EREREREKDRM VD A+ EARER +A+ RERA RAAVERATAE RQRA+AEAR+RLEKA AEARE+     + +ARL+AERAAVERATAEARERA+EKA AE+A++E+R+R+ER ++DKFS  SRN G R  SSS+DLQ+   Q  G    +++ +SS   G+EGESAQRCKARLERY+RTAERAAKAL EKNMRDLIA REQ ER+RLAE+LDADVKRWSSGKEGNLRALLSTLQYILGP+SGW PIPLT+VIT+AAVKKAYRKATLCVHPDKLQQRGASI QKYICEKVFDLLKEAWNKFNSEER
Sbjct:   33 SGKTMYDDVFGGPPRFGAGGPTLSPRPEDYTEIFGGFHASRGASIPVLDLPLV--DDSDEVMFDVRNPRFNYAEVFGGFDGLDFAASYEELMRQADGGGDHDRDGDSSEEAWMQAETESLSEGSDHSG---KYQYFSNGDYYEQIDSSMEFNVSYHKANLRSNRDMSNGVTHVAQLHADPEYAYVIE--TPLQKTDNLNPPLHVTDDIDLEFTSRVTKKKHLRKTVSHPSNWTAGGRQTFTNDATQREYRRNDSSSNEMFVTISEINLRTLPSDVPPPSRPPPLVD--VKNGDYENGQTAASGGRM------GDSSPTFFDVEIDSSSAAAASAAAMKEAMDKAQAKLKSAKELLERKREGIKNSTKPGSKSDGKGKKERASKAVHGSSDIKDERLQGIYEKEDGGVERSVREERQKAVKTQAPISLEAEKLFNVPKRFVVETHGKESQSTLEVDDIDGADEWQEATQFFELVR----TDKSRMGFEQTNNDKVLMQS-------MQSYELQHKAKTESIGALELQLDSDKEVEAVREDHELEKVERDMKTAKESCERGEPTGISKAAKEARRHKGHEKKVKEAQEVSVLEENGQSIAARKPLRNGKKPTGADELEQRE-----KRVNAQQKEIKV-EVGLAMELKENGQQEKETSISIENPKRV------------EESQEREGQKSWREVFEREKNETK----LKQAENEKRLSEALEQEEKEKRLKEAHEREEIEKKEKEARELEESEKIWRMALEQIENEKRLKQAHMQEVNERRQRKALEHEEMEKKQREAHEKEESKRRLEQVTERGKEERQQKEVIQREETENKIKEACEKVGIDKGLKEACEKEETAKRLKEVREKEN-IEKMLKE------AVEQKDYSKPVKEVQDTEDEVKQ----KVVERVETEEVQGVNCVHQHPERVENGKKLKIAEGTHQHVEGEDPVVSDEVNKLDYSKKCQENQLAGNNDQNCDELEQTEESTLEESGKLEAEFGDGEKQSEAMGKGDVDGKFNASAMAPGDLEVKVNQYRKDEVSDLCHQDDGVKKAGEAGIGIGQRNAEKINSVPGMDSDNNNQGLKFAYECRERARNNKEAQVPSHL---EENKDKLVSAQSVKESVETGRKPEVAKSSVLEGKGSTQRTVQQVKISQSTERRDKNKNDSLTSEEKDAERLKRDRELEMERLRKMEEEREREREREKDRMAVDRASLEARERGYAEARERAARAAVERATAEARQRAMAEARDRLEKACAEAREK----SSMEARLRAERAAVERATAEARERAVEKAMAERAAFEARERIERSMSDKFST-SRNSGMRTSSSSSDLQDQHFQSTGSFGGVRYPYSSAYNGVEGESAQRCKARLERYRRTAERAAKALEEKNMRDLIAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKEAWNKFNSEER 1471    
Match NameStatsDescription
A0A5J5AS83E-Value: 0.000e+0, PID: 45.33J domain-containing protein {ECO:0000259|PROSITE:P... [more]
A0A2R6RLH0E-Value: 0.000e+0, PID: 42.30(Auxilin-like protein {ECO:0000313|EMBL:PSS30835.1... [more]
A0A5J5BWM0E-Value: 0.000e+0, PID: 43.62J domain-containing protein {ECO:0000259|PROSITE:P... [more]
A0A2R6PAM3E-Value: 0.000e+0, PID: 42.36(Auxilin-like protein {ECO:0000313|EMBL:PSR88062.1... [more]
A0A834LD75E-Value: 0.000e+0, PID: 42.25(Uncharacterized protein {ECO:0000313|EMBL:KAF7130... [more]
D7SPB0E-Value: 0.000e+0, PID: 42.66J domain-containing protein {ECO:0000259|PROSITE:P... [more]
A0A061DH07E-Value: 0.000e+0, PID: 40.05(Chaperone DnaJ-domain superfamily protein, putati... [more]
A0A2I4ENL0E-Value: 0.000e+0, PID: 39.26(auxilin-like protein 1 {ECO:0000313|RefSeq:XP_018... [more]
A0A4U5PUX1E-Value: 0.000e+0, PID: 39.60(Trichohyalin-related family protein {ECO:0000313|... [more]
A0A6J1BN47E-Value: 0.000e+0, PID: 40.11(auxilin-like protein 1 isoform X1 {ECO:0000313|Re... [more]

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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions.

For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins.

Data from this analysis can be viewed in JBrowse here.

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