DCAR_020802

Resource Type: 
Polypeptide
Name: 
DCAR_020802
Identifier: 
DCAR_020802.mRNA-protein
Sequence: 
MVIEDDSFIRPDSHKQSRSSPLPKPGSEFSVVLSPPSMSNLHDHEEDCCS
TVSRGGRRRFRNISGVYQVMSFAIRALNKDDVDPSYMTRIAKLVTSELIS
SKELNADWQRAAAGVLVSIGSHCPDLVRTSTVEALGQMVGLVARLQLKAA
LPRLVPTILELYGKDQEVSFLATCSLYNLLNASLLSESGPLLEFEDVKVI
LSSLLPVICSYNDNNDRSDFSMGLKTYNKVQHCFLTVGMVYSEELFLFLL
NLIMVMASHCYLVGSSGELFVEYLVRNCAMSDKERDNLESFKEYSRSGSS
YYSFQYKRLELKIGVCPSELRAISEKGLLLITITIPEMEELFARLLVLLH
DPLAREQLATQILTIPKMKAYVSDTEDLKQDPSYQETWDDMIVHFLAESL
DVVQDNNWIISLGNAFAEQYELYTFDDDHSALLHRCFGMLLQKVDSRSYV
REKIDWMYKQADIACPTNRLGLAKAVGLVAASHLDTVLEKLKSILDNVGQ
SFVQRFLSFFSERAKHMDDSDDIHAALALMYGYAARYAPSTVIEARIDAL
VGTNMLSRLLHVQNPKAKQAVITAIDLLGRAVINAAGNGISFPLKKRDLL
LDYIVTLMGLDDDNDIYDSSIELLHTQATLGLFALPNEPSDVVNPLIDNL
ITLLCAILVTSGEDGRSRAEQLLYLLGQIDQYVSSPVDYQRRRGCLAAYE
MLLKFRTLCVTGYCPVGCAGSCTHIKQVNRSLQRNSNLPSAFTLPSRDAL
GLGNRIVSYLPRCADTNSEVRKISAQIIGQLFSISLSLPRPVPHTSVTNS
EMSYGALSSLEDVIAILRSDASIDPSEVFNRVVSSVCTLLTTDELVATLS
NCSAAISDKIKQSAEGAIQAVVEFVTKRGNDLNESAISSEVLASAGRDIV
TKDISRLRGGWPMQDAFYIPGISLILSKYLNRTLNVQREAAAAALSEFAR
YSEGLSSLLEEIVEALCRHVSDDSPTVRRLCLKGLVQMSSIHVNQYTTQV
LGVILALLDDSNESVQLTAVSCLLMVLESSPNDAVEPILLSLSVRLRNLQ
VCMNMKIRAHAFAAFGTLSKYGIGELRDPFIEQVHAVFPRLVLHIHDEDR
SVRQACQNTLKRVADLVGMEEMTVLFSTHRISSDHRTDYEDFLRDIAKQI
TQNLASRSSTYMASIVQVFSVLVGQTSQSAHEIVRATCTSAIGLLLKASN
PSSWRNARLDQLESSRNSHESDSSRM*
Sequence Length: 
1227
Sequence Checksum: 
cb0c67e99e400c8931842596b3790d4c
View location in JBrowse: 
DCARv2_Chr6:28184959..28218630+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, DCAR_020802, derives from mRNA, DCAR_020802.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of DCAR_020802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
[Close]
BLAST of DCAR_020802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5FLH9 ((protein SHOOT GRAVITROPISM 6 isoform X2 {ECO:0000313|RefSeq:XP_020094313.1}))

HSP 1 Score: 1208.36 bits (3125), Expect = 0.000e+0
Identity = 651/1186 (54.89%), Postives = 800/1186 (67.45%), Query Frame = 0
 
Query:  249 LLNLIMVMASHCYLVGSSGELFVEYLVRNCAMSDKERDNLESFKEYSRSGSSYYSFQYKRLELKIG-VCPSELRAISEKGLLL--ITIT-----------------------------------------------------IPEMEELFARLLVLLHDPLAREQLATQILT--------------------IPKMKAYVSDTEDLKQDPSYQETWDDMIVHFLAESLDVVQDNNWIISLGNAFAEQYELYTFDDDHSALLHRCFGMLLQKVDSRSYVREKIDWMYKQADIACPTNRLGLAKAVGLVAASHLDTVLEKLKSILDNVGQSFVQRFLSFFSERAKHMDDSDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVQNPKAKQAVITAIDLLGRAVINAAGNGISFPLKKRDLLLDYIVTLMGLDDDNDIYDSSIELLHTQ---------------------------ATLGLFALPNEPSDVVNPLIDNLITLLCAILVTSGEDGRSRAEQLLYLLGQIDQYVSSPVDYQRRRGCLAAYEMLLKFRTLCVTGYCPVGCAGSCTHIKQVNRSLQRN-SNLPSAFTLPSRDALGLGNRIVSYLPRCADTNSEVRKISAQIIGQLFSISLSLPRPVPHTSVTNSEMSYGALSSLEDVIAILRSDASIDPSEVFNRVVSSVCTLLTTDELVATLSNCSAAISDKIKQSAEGAIQAVVEFVTKRGNDLNESAIS---------------------------------------SEVLASAGRDIVTKDISRLRGGWPMQDAFYI-----------PGISL---------------------ILSKYLNRTLNVQREAAAAALSEFARYSEGLSSLLEEIVEALCRHVSDDSPTVRRLCLKGLVQMSSIHVNQYTTQVLGVILALLDDSNESVQLTAVSCLLMVLESSPNDAVEPILLSLSVRLRNLQVCMNMKIRAHAFAAFGTLSKYGIGELRDPFIEQVHAVFPRLVLHIHDEDRSVRQACQNTLKRVADLVGMEEMTVLFSTHRISSDHRTDYEDFLRDIAKQITQNLASRSSTYMASIV------------------------------------QVFSVLVGQTSQSAHEIVRATCTSAIGLLLKASNP-SSWRNARLDQLESSRNSHESD 1222
            L  LI+VMASHCYL G  GEL VE+L+R+CA+S+++ D+ ++ +   + G     F YKRLE+ +G V P ELRA+ EK LLL  ITI                                                      +P  E LFARL+VLLHDPLAREQLATQILT                    +PKMKAY+SD +DLKQD SYQETWDDMI++FLAESLDVV+DN W++SLG+AFA QY LY  DD+HSA+LHRC GMLLQKVD R YVREKI+WMYK A+I+ PTNRLGLAK +GLVAASHLDTVLEKLK+ILD+VGQ+  QRFL+ FS R K ++D DD +AALALMYGYAARYAPSTVIEARI+ALVGTNMLSR+LHVQ+P AKQAVITAIDLLGRAVINAA  G+ FPLK+RD LLDY++TLMG D+ +D+ DSSIELLHTQ                           ATLG FALPNEPS++V PLI NLITLLCAIL+TSGEDGRSRAEQLL++L Q+D YVS PV++QRRRGC+AAYEML+KFR LC  G C +GC  SCTH KQV+R +QRN SNLPSAF LP+RD+L LG R+++YLPRCADT++EVRK++ QI+   FSISLSLP+ +   SV + E+SY ALSSLEDVI+ILR DASID SEVFNRVVSSVC LLT DELV  L +C+ A+ DKIKQSA+GAIQAV E +TKRG +LNES ++                                       +EVL +AGRD+VTKDISR+RGGWPM DAFYI             I L                     IL K L+R    QREAAAAALSEF R+S    SLLE +VEA+C HVSD+SP VR LCL+GLVQ+   H+ +Y  QVL VI+ALL+D +ESVQLTAV CLL VL +SP DAV+PIL++LSVRLRN+Q+ MN K+R++AFAA+G LS YG+G     F+EQVHA  PRL+LH+HD+D +VR AC+NT K++A L+ ++ ++ L +    +SD R+DYEDF+RD+AKQ+ Q  A+R  +Y+ S +                                    QVF+ LVG+ S+S   +VRA C SA+GLL+K +NP SS  + +LD+++SSRNS +SD
Sbjct:  419 LAELIVVMASHCYLSGHPGELAVEFLIRHCAISNEDVDDFKTKEVAWKRGP----FLYKRLEVIVGPVSPVELRAVCEKSLLLLAITIPEMEHILWPFILKMIIPKKYTAAVATVCKGINELCRHRSSHTSSTYSEFNSSNDVPNPEHLFARLIVLLHDPLAREQLATQILTTLCYLGPLFPRNLSLLWQDEVPKMKAYISDPDDLKQDSSYQETWDDMIINFLAESLDVVRDNEWVMSLGDAFASQYILYDSDDEHSAMLHRCLGMLLQKVDDRRYVREKINWMYKHANISIPTNRLGLAKGIGLVAASHLDTVLEKLKNILDSVGQNRFQRFLALFSSRGK-LEDGDDTYAALALMYGYAARYAPSTVIEARINALVGTNMLSRVLHVQHPTAKQAVITAIDLLGRAVINAAEMGVLFPLKRRDQLLDYVLTLMGRDETDDVVDSSIELLHTQSLALSACTTLVSIEPRLPMETRNRVMKATLGFFALPNEPSEIVEPLISNLITLLCAILLTSGEDGRSRAEQLLHILRQLDCYVSCPVEHQRRRGCVAAYEMLMKFRALCSGGICGLGCHLSCTHSKQVDRGVQRNFSNLPSAFVLPNRDSLSLGERVIAYLPRCADTSTEVRKVAVQIVCLFFSISLSLPK-LASGSVIDLEVSYAALSSLEDVISILRRDASIDQSEVFNRVVSSVCVLLTKDELVVLLHSCTTAVCDKIKQSADGAIQAVTELITKRGKELNESDVARTTQSLLSAAVSVTDKHIRQEVLYTISCLAESTNHSVVFTEVLLAAGRDLVTKDISRIRGGWPMLDAFYILARDGEQTEKEKWIELIQEIACCTSIKRPKEVSPTCTILRKALHRNQIFQREAAAAALSEFIRHSNVDPSLLEHMVEAMCLHVSDESPIVRSLCLRGLVQVPDSHMPRYIPQVLSVIVALLEDPDESVQLTAVQCLLNVLNTSPKDAVDPILINLSVRLRNIQISMNTKLRSNAFAAYGALSNYGVGSQHQAFLEQVHATLPRLILHLHDDDLNVRLACRNTFKQLAPLMEVDGLSSLLNKQYFTSDRRSDYEDFIRDLAKQLCQLSAARVDSYLESAIQAFDAPWPVIEANAICFSSCLLSLLDDQPSLAPYFSQVFATLVGKMSRSPDAVVRAACFSALGLLVKTANPLSSSASQQLDRIDSSRNSQDSD 1598

HSP 2 Score: 166.777 bits (421), Expect = 7.895e-39
Identity = 107/271 (39.48%), Postives = 145/271 (53.51%), Query Frame = 0
 
Query:  127 VRTSTVEALGQMVGLVARLQLKAALPRLVPTILELYGKDQEVSFLATCSLYNLLNASLLSESG-PLLEFEDVKVILSSLLPVICSYNDNNDRSDFSMGLKTYNKVQHCFLTVGMVYSEELFLFLLNLI---------------------MVMASHCY------------------LVGSSGELFVEYLVRNCAMSDKERDNLESF--KEYSRSGSSYYSFQYKRLELKIG-------------VCPSELRAISEKGLLLITITIPEMEELF 342
            VR S+ EALG+MVGLV R QLKAALPRL+ T+L+L  K+QE++F+A  SL+N+L A L SESG PLL+FE++ + L +LLPV    N  ++ +DFSMGLKTYN++QHCFL +G VY E+L LFLLN                       ++   HC                   +  +  EL V  +  +C +S    +    F  +  + S      F+ K +  K G             V P ELRA+ EK LLL+ ITIPEME + 
Sbjct:  240 VRLSSAEALGEMVGLVTRSQLKAALPRLILTVLDLCKKEQEIAFVAARSLHNILTACLFSESGPPLLDFEELTITLCTLLPVASINNTKDEHTDFSMGLKTYNEIQHCFLVIGSVYPEDLCLFLLNKCKSKDEASIIGALCVIKHLLPRLLEVWHCKRTLLVEVVTLLLDEHSLGIRKALAELIV-VMASHCYLSGHPGELAVEFLIRHCAISNEDVDDFKTKEVAWKRGPFLYKRLEVIVGPVSPVELRAVCEKSLLLLAITIPEMEHIL 509

HSP 3 Score: 124.405 bits (311), Expect = 6.448e-26
Identity = 60/129 (46.51%), Postives = 88/129 (68.22%), Query Frame = 0
 
Query:   47 DCCSTVSRGGRRRFRNISGVYQVMSFAIRALNKDDVDPSYMTRIAKLVTSELISSKELNADWQRAAAGVLVSIGSHCPDLVRTSTV-------EALGQMVGLVARL----------QLKAALPRLVPTI 158
            DCCS +SRGGRRRF N++GV+ VM+ A+RA+++ +V+P+YMT++AK+ T+E+++SK+ NADWQRAA+ +LVSIGSH PDL+             AL  MV ++A            +LK  L R++P I
Sbjct:   50 DCCSAISRGGRRRFGNLAGVFSVMACAVRAMDQKNVEPTYMTKLAKIATAEIVTSKDFNADWQRAASSLLVSIGSHVPDLMMEEVFLHLSGPNSALPAMVQILADFASAEALQFTRRLKDVLLRVLPII 178
[Close]
BLAST of DCAR_020802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6HKD5 (PWWP domain-containing protein {ECO:0000259|PROSITE:PS50812})

HSP 1 Score: 1189.1 bits (3075), Expect = 0.000e+0
Identity = 630/976 (64.55%), Postives = 726/976 (74.39%), Query Frame = 0
 
Query:  100 SSKELNAD---WQRAAAGVLVSIGSHCPDL-VRTSTVEALGQMVGLVARLQLKAALPRLVPTILELYGKDQEVSFLATCSLYNLLNASLLSESGP-LLEFEDVKVILSSLLPVICSYNDNNDRSDFSMGLKTYNKVQHCFLTVGMVYSEELFLFLLNLIMVMASHCYLVGSSGELFVEYLVRNCAMSDKERDNLESFKEYSRSGSSYYSFQYKRLELKIG-VCPSELRAISEKG--LLLITIT-----------------------------------------------------IPEMEELFARLLVLLHDPLAREQLATQILT--------------------IPKMKAYVSDTEDLKQDPSYQETWDDMIVHFLAESLDVVQDNNWIISLGNAFAEQYELYTFDDDHSALLHRCFGMLLQKVDSRSYVREKIDWMYKQADIACPTNRLGLAKAVGLVAASHLDTVLEKLKSILDNVGQSFVQRFLSFFSERAKHMDDSDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVQNPKAKQAVITAIDLLGRAVINAAGNGISFPLKKRDLLLDYIVTLMGLDDDNDIYDSSIELLHTQ---------------------------ATLGLFALPNEPSDVVNPLIDNLITLLCAILVTSGEDGRSRAEQLLYLLGQIDQYVSSPVDYQRRRGCLAAYEMLLKFRTLCVTGYCPVGCAGSCTHIKQVNRSLQRN-SNLPSAFTLPSRDALGLGNRIVSYLPRCADTNSEVRKISAQIIGQLFSISLSLPRPVPHTSVTNSEMSYGALSSLEDVIAILRSDASIDPSEVFNRVVSSVCTLLTTDELVATLSNCSAAISDKIKQSAEGAIQAVVEFVTKRGNDLNE---------------------------SAISS------------EVLASAGRDIVTKDISRLRGGWPMQDAFYIPGISLILS 927
            S+  L+AD   +  +A  +L+ + +   DL VR S+VEALGQMVGL+ R QLKAALPRLVPTILELY KD +++FLATCSL+NLLNASLLSE+GP LL+FE++ VILS+LLPV+C  ND+ ++SDFS+GLKTYN+VQHCFLTVG+VY E+LF+FLLNL+++MASHCYLVG SGELFVEYLVRNCA+SD+E   LE+ KE  RS ++ Y  QYKRLE+K G VC +ELR+I EKG  LL ITI                                                      IP  EELFARL+VLLH+PLAREQLATQ+LT                    IPKMKAYVSDT+DLKQDPSYQETWDDMI++FLAESLDV+QD  W+ISLGNAF+ QYELYT DD+HSALLHRC G+LLQKVD R YV EKI+WMY QA+IA P+NRLGLAKA+GLVAASHLDTVLEKLK ILDNVGQS  QR LSFFS+R + M++SDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHV++P AKQAVITAIDLLGRAVINAA +G SFPLK+RD LLDYI+TLMG DDD+   +SS+ELLHTQ                           ATLG FALPNEPSDVV+PLIDNLITLLCAIL+TSGEDGRSRAEQLL++L QIDQYVSSP++YQR+R CLA YEMLLKF+++CV+GYC +GC GSCTH K ++R+L  N SNLPSAF LPSRD+L LGNR++ YLPRCADTNSEVRKISAQI+   FSISLSLPRPV  +   + E+SY ALSSLEDVIAILRSDASIDPSEVFNRVVSSVC LLT DELVA L  C+ AI DKIKQSAEGAIQAV +FV KRG++LNE                           +AISS            EVL +A RDIVTKDISRLRGGWPMQDAFY     ++LS
Sbjct:  465 STSPLDADVMSFLNSAFELLLRVWATSRDLKVRVSSVEALGQMVGLITRAQLKAALPRLVPTILELYKKDLDIAFLATCSLHNLLNASLLSENGPPLLDFEELMVILSTLLPVVCINNDSKEQSDFSVGLKTYNEVQHCFLTVGLVYPEDLFMFLLNLVVIMASHCYLVGPSGELFVEYLVRNCALSDQESYALENSKEVIRSNNNNYGCQYKRLEVKSGAVCLTELRSICEKGLLLLTITIPEMEHILWPFLLKMIIPRAYTGAAATVCRCISELCRHGSSYANTMLSECKARIDIPNPEELFARLVVLLHNPLAREQLATQVLTVLYYLAPLFPKNINLFWQDEIPKMKAYVSDTDDLKQDPSYQETWDDMIINFLAESLDVIQDTEWVISLGNAFSRQYELYTSDDEHSALLHRCLGILLQKVDDRLYVLEKINWMYTQANIAFPSNRLGLAKAMGLVAASHLDTVLEKLKDILDNVGQSIFQRILSFFSDRGR-MEESDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVRHPTAKQAVITAIDLLGRAVINAAESGASFPLKRRDQLLDYILTLMGCDDDDGFAESSLELLHTQALALSACTTLVSVEPKLTIETRNHVMKATLGFFALPNEPSDVVDPLIDNLITLLCAILLTSGEDGRSRAEQLLHILRQIDQYVSSPLEYQRKRSCLAVYEMLLKFKSVCVSGYCALGCHGSCTHSKHIDRTLHGNFSNLPSAFVLPSRDSLCLGNRVIMYLPRCADTNSEVRKISAQILDLFFSISLSLPRPVGSSFGVDIELSYSALSSLEDVIAILRSDASIDPSEVFNRVVSSVCVLLTKDELVAALHYCTGAICDKIKQSAEGAIQAVTDFVMKRGHELNEMDVSRTTQSLLSAAAHVTEKYLRQETLAAISSLAENTSSKIVFNEVLTTAARDIVTKDISRLRGGWPMQDAFYAFSQHIVLS 1439

HSP 2 Score: 396.356 bits (1017), Expect = 1.412e-112
Identity = 203/349 (58.17%), Postives = 254/349 (72.78%), Query Frame = 0
 
Query:  904 ISRLRGGWPMQDAFYIPGISLILSKYLNRTLNVQREAAAAALSEFARYSEGLSSLLEEIVEALCRHVSDDSPTVRRLCLKGLVQMSSIHVNQYTTQVLGVILALLDDSNESVQLTAVSCLLMVLESSPNDAVEPILLSLSVRLRNLQVCMNMKIRAHAFAAFGTLSKYGIGELRDPFIEQVHAVFPRLVLHIHDEDRSVRQACQNTLKRVADLVGMEEMTVLFSTHRISSDHRTDYEDFLRDIAKQITQNLASRSSTYMASIVQ------------------------------------VFSVLVGQTSQSAHEIVRATCTSAIGLLLKASNPSSWRNARLDQLESSR 1216
            I  L G   ++    +P I LIL+K L+R    QREAAAAALSEF RYS+GL SLLE++VEALCRH SDDSPTVR LCL+GLVQ+ SIH+ QYT QVLGVI+ALL+DS+ESVQLTAVSCLL VLESSPNDAVEPIL++LSVR+RNLQ+C N+K+RA+AFA  G+LS YG+G  R+ F+EQVHA FPRLVLHIHD+D SVR AC++TLKR+A L+ +E M  LF+TH  +SDHR+DYEDF+RD++KQ +  L+SR  TYMAS +Q                                    VF +L+ + S SA EIVRATC+SA+GLLLK++N   WR + LD+ +S+R
Sbjct: 1570 IGDLAGCISIKRPKEVPTICLILTKSLDRHQGFQREAAAAALSEFVRYSDGLDSLLEQMVEALCRHASDDSPTVRCLCLRGLVQIPSIHILQYTNQVLGVIMALLEDSDESVQLTAVSCLLKVLESSPNDAVEPILINLSVRIRNLQICTNVKMRANAFAGLGSLSNYGVGAQREAFLEQVHAAFPRLVLHIHDDDLSVRLACRSTLKRIAPLMELEGMFALFNTHSFNSDHRSDYEDFVRDLSKQFSLRLSSRVDTYMASTIQAFDAPWPTIQANAIYFSSSMLSVSDDQHILALYYTRVFGMLISKMSHSADEIVRATCSSALGLLLKSTNLLQWRASGLDRADSAR 1918

HSP 3 Score: 130.183 bits (326), Expect = 1.449e-27
Identity = 66/129 (51.16%), Postives = 87/129 (67.44%), Query Frame = 0
 
Query:   47 DCCSTVSRGGRRRFRNISGVYQVMSFAIRALNKDDVDPSYMTRIAKLVTSELISSKELNADWQRAAAGVLVSIGSHCPDLVRTSTV-------EALGQMVGLVARL----------QLKAALPRLVPTI 158
            +CC  VSRGGRRRF N+SG++QVM+ A+RAL K DVDP +M ++AK+ T+E+ISSKEL+ADWQRAAAG+LVSIGSH PDL+             AL  MV ++A            +LK  L R++P +
Sbjct:  306 ECCCAVSRGGRRRFGNMSGLFQVMASAVRALEKRDVDPPFMAKLAKIATAEMISSKELSADWQRAAAGLLVSIGSHLPDLMMEEIFLHLPGPNSALPAMVQILADFASADALQFTPRLKGVLSRVLPIL 434
[Close]
BLAST of DCAR_020802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J5VGC5 (Cnd1 domain-containing protein {ECO:0000259|Pfam:PF12717})

HSP 1 Score: 1153.27 bits (2982), Expect = 0.000e+0
Identity = 615/992 (62.00%), Postives = 713/992 (71.88%), Query Frame = 0
 
Query:  127 VRTSTVEALGQMVGLVARLQLKAALPRLVPTILELYGKDQEVSFLATCSLYNLLNASLLSESGP-LLEFEDVKVILSSLLPVICSYNDNNDRSDFSMGLKTYNKVQHCFLTVGMVYSEELFL--------------------------------------------FLLN------------LIMVMASHCYLVGSSGELFVEYLVRNCAMSDKERDNLESFKEYSRSGSSYYSFQYKRLELKIG-VCPSELRAISEKGLLL--ITIT----------------------------------------------------IPEMEELFARLLVLLHDPLAREQLATQILT--------------------IPKMKAYVSDTEDLKQDPSYQETWDDMIVHFLAESLDVVQDNNWIISLGNAFAEQYELYTFDDDHSALLHRCFGMLLQKVDSRSYVREKIDWMYKQADIACPTNRLGLAKAVGLVAASHLDTVLEKLKSILDNVGQSFVQRFLSFFSERAKHMDDSDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVQNPKAKQAVITAIDLLGRAVINAAGNGISFPLKKRDLLLDYIVTLMGLDDDNDIYDSSIELLHTQ---------ATLGLFALPNEPSDVVNPLIDNLITLLCAILVTSGEDGRSRAEQLLYLLGQIDQYVSSPVDYQRRRGCLAAYEMLLKFRTLCVTGYCPVGCAGSCTHIKQVNRSLQRN-SNLPSAFTLPSRDALGLGNRIVSYLPRCADTNSEVRKISAQIIGQLFSISLSLPRPVPHTSVTNSEMSYGALSSLEDVIAILRSDASIDPSEVFNRVVSSVCTLLTTDELVATLSNCSAAISDKIKQSAEGAIQAVVEFVTKRGNDLNE---------------------------SAISS------------EVLASAGRDIVTKDISRLRGGWPMQDAFYIPGISLILSK-YLNRTLNV 936
            VR S+VEALGQMVGL+ R QLKAALPRLVPTILELY +DQ+V+FLATCSL+NLL+ASLLSESGP LL+FE++ VILS+LLPV+C  NDN + SDFS+GLKTYN+VQ CFLTVG+VY E+LF+                                            FLL+            LI+VMASHCYL+G SGELFVEYLVR+CA++DK+ ++LE  K+   SG+    FQYKRLE+KIG +CP+ELRAI EKGLLL  ITI                                                     IP  EELF RL+VLLHDPLAREQLA+QILT                    IPK+KAYVSDTEDL+QDP YQETWDDMI++F AESLDV+QD++W+I LGNA  +QY LYT DD+HSALLHRCFG+ LQKV+ R+YVR+KIDWMYKQA+I  PTNRLGLAKA+GLVAASHLDTVLEKLK ILDNV QS  +RFLSFFS+  K  +DSDDIHAALALMYGYAA+YAPSTVIEARIDALVGTNMLSRLLHV++P AKQAVITAIDLLGRAVINAA NG SFPLK+RD +LDYI+TLMG DD     D+S+ELL TQ         ATLG FALPN+P DVVNPLIDNLITLLCAIL+TSGEDGRSRAEQLL++L QIDQYVSSP+DYQRRRGCLA +EMLLKFRT+C+T +C +GC GSCTH KQ +R+L  N SNLPSAF LPSR+AL LG+R++ YLPRCADTNSEVR +SAQI+ QLFSISLSLPRP   +   + E+SY ALSSLEDVIAILRSDASIDPSEVFNR++SSVC LLT +EL+ATL  C++AI DKIKQSAEGAIQAV+EFVT+RGN+L+E                           +AISS            EVLA++GRDIVTKDISRLRGGWPMQDAFY      +LS  +L   + V
Sbjct:  241 VRISSVEALGQMVGLITRTQLKAALPRLVPTILELYKRDQDVAFLATCSLHNLLHASLLSESGPPLLDFEELTVILSTLLPVVCINNDNKEHSDFSVGLKTYNEVQRCFLTVGLVYPEDLFVFLINKCRLKEEPLTFGALCVLKHLLPRLSEAWHNKRHNLVEAVQFLLDDQDLGVRKVLSELIVVMASHCYLIGPSGELFVEYLVRHCALTDKDSNDLERSKD--ASGNPDIPFQYKRLEVKIGTLCPAELRAICEKGLLLLTITIPEMEHILWPFLLKMIIPQAYTGAVAMVCRCISELCRHRSNSNTMLAECKARADIPNPEELFVRLVVLLHDPLAREQLASQILTVLCYLAPLFPKNINLFWQDEIPKLKAYVSDTEDLRQDPCYQETWDDMIINFFAESLDVIQDSDWVIPLGNAITKQYGLYTSDDEHSALLHRCFGVFLQKVNDRAYVRDKIDWMYKQANITIPTNRLGLAKAMGLVAASHLDTVLEKLKGILDNVEQSIFRRFLSFFSDDFK-TEDSDDIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHPTAKQAVITAIDLLGRAVINAAENGSSFPLKRRDQMLDYILTLMGRDDSESFSDTSLELLGTQVSNTFGVIVATLGFFALPNDPIDVVNPLIDNLITLLCAILLTSGEDGRSRAEQLLHILRQIDQYVSSPMDYQRRRGCLAVHEMLLKFRTVCITAHCALGCQGSCTHKKQFDRNLHGNFSNLPSAFVLPSREALSLGDRVIMYLPRCADTNSEVRTVSAQILDQLFSISLSLPRPETSSYGVDIELSYSALSSLEDVIAILRSDASIDPSEVFNRIISSVCILLTKNELIATLHGCTSAICDKIKQSAEGAIQAVIEFVTRRGNELSEADVSRTTQALLMAATHVTEKHLRQETLAAISSLAESTSSKVVFNEVLATSGRDIVTKDISRLRGGWPMQDAFYAFSQHTVLSSLFLKHVIGV 1229

HSP 2 Score: 412.92 bits (1060), Expect = 8.182e-119
Identity = 211/341 (61.88%), Postives = 252/341 (73.90%), Query Frame = 0
 
Query:  919 IPGISLILSKYLNRTLNVQREAAAAALSEFARYSEGLSSLLEEIVEALCRHVSDDSPTVRRLCLKGLVQMSSIHVNQYTTQVLGVILALLDDSNESVQLTAVSCLLMVLESSPNDAVEPILLSLSVRLRNLQVCMNMKIRAHAFAAFGTLSKYGIGELRDPFIEQVHAVFPRLVLHIHDEDRSVRQACQNTLKRVADLVGMEEMTVLFSTHRISSDHRTDYEDFLRDIAKQITQNLASRSSTYMASIV------------------------------------QVFSVLVGQTSQSAHEIVRATCTSAIGLLLKASNPSSWRNARLDQLESSRNSHESDS 1223
            +  I +ILSK LNR    QREAAAAALSEF RYS+G  SLLE+IVE LCRHVSD+SPTVRRLCL+GLVQ+ SIH+ QYTTQVLGVILALLDDS+ESVQLTAVSCLL +LESSPNDAVEPILL+LSVRLRNLQ+CMN K+RA+AFAAFG LS YGIG   + F+EQVHA  PRLVLH+HD+D SVRQAC++TLKR+A L+ ME +  LF+ H  + DHRTDYEDF+RD+ KQ  Q+L SR  TYMAS +                                    QVF  LVG+ S+SA  +VRATC++A+GLLLK S  SSW+ AR+D++ES R SH+S +
Sbjct: 1365 VQSICVILSKSLNRHQRYQREAAAAALSEFVRYSDGFGSLLEQIVEVLCRHVSDESPTVRRLCLRGLVQIPSIHMLQYTTQVLGVILALLDDSDESVQLTAVSCLLTMLESSPNDAVEPILLNLSVRLRNLQICMNPKMRANAFAAFGALSNYGIGAQHEAFLEQVHAAIPRLVLHLHDDDVSVRQACRSTLKRIAPLLEMEGLLPLFNMHCFNHDHRTDYEDFVRDLTKQFAQHLPSRVDTYMASTIQAFDAPWPIIQANAIYFSSCMLSLSDDQHILTLYYAQVFGTLVGKMSKSADAVVRATCSAALGLLLKFSKSSSWKAARVDRVESGRRSHDSSA 1705

HSP 3 Score: 131.339 bits (329), Expect = 6.020e-28
Identity = 65/118 (55.08%), Postives = 84/118 (71.19%), Query Frame = 0
 
Query:   47 DCCSTVSRGGRRRFRNISGVYQVMSFAIRALNKDDVDPSYMTRIAKLVTSELISSKELNADWQRAAAGVLVSIGSHCPDLVRTSTV-------EALGQMVGLVARLQLKAAL---PRL 154
            DCCS  SRGGRRRF N++GV+QVM++ +RAL+KD+VDP +M++IAK+ T+E+ISSKELN DWQRAA+G+LVSIG H PDL+             AL  MV ++A      AL   PRL
Sbjct:   51 DCCSASSRGGRRRFGNMAGVFQVMAYGVRALDKDEVDPLFMSKIAKIATAEIISSKELNTDWQRAASGLLVSIGLHLPDLMMEEIFLHLPGPNSALPAMVQILADFAYADALQFTPRL 168
[Close]
BLAST of DCAR_020802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2N9GPC2 ((Uncharacterized protein {ECO:0000313|EMBL:SPD01191.1}))

HSP 1 Score: 1148.27 bits (2969), Expect = 0.000e+0
Identity = 609/947 (64.31%), Postives = 698/947 (73.71%), Query Frame = 0
 
Query:  125 DLVRTSTVEALGQMVGLVARLQLKAALPRLVPTILELYGKDQEVSFLATCSLYNLLNASLLSESGP-LLEFEDVKVILSSLLPVICSYNDNNDRSDFSMGLKTYNKVQHCFLTVGMV-----------YSEELFL-----FLLN------------LIMVMASHCYLVGSSGELFVEYLVRNCAMSDKERDNLESFKEYSRSGSSYYSFQYKRLELKIG-VCPSELRAISEKGLLLITITIPEME---------------------------------ELFARLLVLLHDPLAREQLATQILTIPKMKAYVSDTEDLKQDPSYQETWDDMIVHFLAESLDVVQDNNWIISLGNAFAEQYELYTFDDDHSALLHRCFGMLLQKVDSRSYVREKIDWMYKQADIACPTNRLGLAKAVGLVAASHLDTVLEKLKSILDNVGQSFVQRFLSFFSERAKHMDDSDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVQNPKAKQAVITAIDLLGRAVINAAGNGISFPLKKRDLLLDYIVTLMG---LDDDNDIYDSSIELLHTQA---------------------------TLGLFALPNEPSDVVNPLIDNLITLLCAILVTSGEDGRSRAEQLLYLLGQIDQYVSSPVDYQRRRGCLAAYEMLLKFRTLCVTGYCPVGCAGSCTHIKQVNRSLQRN-SNLPSAFTLPSRDALGLGNRIVSYLPRCADTNSEVRKISAQIIGQLFSISLSLPRPVPHTSVTNSEMSYGALSSLEDVIAILRSDASIDPSEVFNRVVSSVCTLLTTDELVATLSNCSAAISDKIKQSAEGAIQAVVEFVTKRGND-----------------------------------------------LNESAISS------------EVLASAGRDIVTKDISRLRGGWPMQDAFY 918
            +LVR S+VEALGQMVGL+ R QLK+ALPRLVPTILELY KDQ+++F+ATCSLYNLLNASL+SESGP LL+FE++ VILSSLLPV+C  +D+N+ SDFS+ LK   +    F  + ++           +S+   L     FLL+            LI+VMASHCYLVG SGELFVEYLVR+C + D+ R+ L + KE   S S++ SFQYKRLE+KIG VCP+ELRAI EKGLLL+TITIPEME                                 EL ARL+VLLHDPLAREQLATQILTIPKMKAYVSDTEDLKQDPSYQETWDDMI++FLAESLDV+QD NW+ISLGNAF +QYELYT DD+HSALLHRC G+LLQKV+ R+YVR++IDWMYKQA+IA PTNRLGLAKA+GLVAASHLDTVL+KLK ILDNVGQS  QRFLSFF++  +  ++ DDIHAALALMYGYAA+YAPSTVIEARIDALVGTNMLSRLLHV++P AKQAVITAI+LLG AVINAA NG SFPLK+RD LLDYI+TLMG    DD     DS++ELLHTQA                           TLG FALPN+P DVVNPLIDNLITLLCAIL+TSGEDGRSRAEQLL++L QIDQYVSSPV+YQRRRGC A YEM+LKFR +C++G C +GC GSCTH KQV+R++  N SNLPSAF LPSR+AL LG+R+V YLPRCADTNSEVRK+SAQI+ QLFSISLSLPRP       + E SYGALSSLEDVIAILRSDASIDPSEVFNR++SSVC LL  DELVATL  CS+AI DKIKQSAEGAIQAV+EFVTKRG++                                               LN   ISS            EVLA+AGRDIVTKDISRLRGGW MQDAFY
Sbjct:  222 ELVRISSVEALGQMVGLITRTQLKSALPRLVPTILELYKKDQDIAFVATCSLYNLLNASLMSESGPPLLDFEELTVILSSLLPVVCINSDSNEHSDFSVALKVLKEEPLTFGALSVLKHLLPRLSEAWHSKRPLLVEAVKFLLDEQNLGVRKALSELIVVMASHCYLVGPSGELFVEYLVRHCTLPDQNRNELGNSKEDLGSSSAHVSFQYKRLEVKIGAVCPTELRAICEKGLLLLTITIPEMEVCRCISELCRHRPSHSDTMLSECKARSDIPNPEELLARLVVLLHDPLAREQLATQILTIPKMKAYVSDTEDLKQDPSYQETWDDMIINFLAESLDVIQDTNWVISLGNAFTKQYELYTSDDEHSALLHRCLGVLLQKVNDRAYVRDEIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDTVLDKLKDILDNVGQSIFQRFLSFFTDSFR-AEECDDIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHPTAKQAVITAINLLGCAVINAAENGTSFPLKRRDQLLDYILTLMGREAQDDYEGFVDSNLELLHTQALALSACTTLVSVEPKLTVETRNLVLKATLGFFALPNDPVDVVNPLIDNLITLLCAILLTSGEDGRSRAEQLLHMLRQIDQYVSSPVEYQRRRGCRAVYEMVLKFRMVCISGNCALGCHGSCTHSKQVDRTVHGNFSNLPSAFVLPSREALCLGDRVVMYLPRCADTNSEVRKVSAQILDQLFSISLSLPRPTASNFSVDIESSYGALSSLEDVIAILRSDASIDPSEVFNRIISSVCILLAKDELVATLHGCSSAICDKIKQSAEGAIQAVIEFVTKRGHELSEIDVSRTTQSLLSATVHVTEKHLRLETLGALPFLYLVVPLSLKPILNFQKISSLAENTSSKIVFNEVLATAGRDIVTKDISRLRGGWSMQDAFY 1167

HSP 2 Score: 132.494 bits (332), Expect = 1.891e-28
Identity = 55/81 (67.90%), Postives = 73/81 (90.12%), Query Frame = 0
 
Query:   47 DCCSTVSRGGRRRFRNISGVYQVMSFAIRALNKDDVDPSYMTRIAKLVTSELISSKELNADWQRAAAGVLVSIGSHCPDLV 127
            DCC  VSRGGRRRF N++GV+QVM+F +RAL+K++VDP+++ + AK+ T+E+ISSKELNADWQRAA+G+LVSIGSH PDL+
Sbjct:   51 DCCWAVSRGGRRRFGNMAGVFQVMAFGVRALDKNNVDPTFVAKFAKIATAEMISSKELNADWQRAASGLLVSIGSHLPDLM 131
[Close]
BLAST of DCAR_020802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J6GYY5 ((Uncharacterized protein {ECO:0000313|EMBL:KAF4388133.1}))

HSP 1 Score: 1147.5 bits (2967), Expect = 0.000e+0
Identity = 620/1010 (61.39%), Postives = 712/1010 (70.50%), Query Frame = 0
 
Query:  111 AAAGVLVSIGSHCPDL-VRTSTVEALGQMVGLVARLQLKAALPRLVPTILELYGKDQEVSFLATCSLYNLLNASLLSESGP-LLEFEDVKVILSSLLPVICSYNDNNDRSDFSMGLKTYNKVQHCFLTVGMVYSEELFL--------------------------------------------FLLN------------LIMVMASHCYLVGSSGELFVEYLVRNCAMSDKERDNLESFKEYSRSGSSYYSFQYKRLELKIG-VCPSELRAISEKGLLLITITIPEME----------------------------ELF---------------------------ARLLVLLHDPLAREQLATQILT--------------------IPKMKAYVSDTEDLKQDPSYQETWDDMIVHFLAESLDVVQDNNWIISLGNAFAEQYELYTFDDDHSALLHRCFGMLLQKVDSRSYVREKIDWMYKQADIACPTNRLGLAKAVGLVAASHLDTVLEKLKSILDNVGQSFVQRFLSFFSERAKHMDDSDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVQNPKAKQAVITAIDLLGRAVINAAGNGISFPLKKRDLLLDYIVTLMGLDDDN-DIYDSSIELLHTQ---------------------------ATLGLFALPNEPSDVVNPLIDNLITLLCAILVTSGEDGRSRAEQLLYLLGQIDQYVSSPVDYQRRRGCLAAYEMLLKFRTLCVTGYCPVGCAGSCTHIKQVNRSLQRN-SNLPSAFTLPSRDALGLGNRIVSYLPRCADTNSEVRKISAQIIGQLFSISLSLPRPVPHTSVTNSEMSYGALSSLEDVIAILRSDASIDPSEVFNRVVSSVCTLLTTDELVATLSNCSAAISDKIKQSAEGAIQAVVEFVTKRGNDLNE---------------------------SAISS------------EVLASAGRDIVTKDISRLRGGWPMQDAFY 918
            +A  +L+ + +   DL +R S+V+ALGQMVGL+ R QLKAALPRLVPTILELY KDQ+++ LAT SL++LL+A+LLSESGP LL+FE++ V+LSSLLPV+C  ND+ + SD+S+GLKTYN+VQHCFLTVG+VYSE+LF+                                            FLL+            LI+VMASHCYLVG SGELFVEYLVR+CA++D++ ++ +  KE S SG +Y   Q KRLE+KIG VC  ELRAI EKGLLL+TITIPEME                            ELF                           ARLLVLLHDPLAR+QLATQILT                    IPKMKAYVSDTEDLKQDP YQETWDDMI++FLAESLDV+QD  W+ISLGNAF  QYELYT DD+HSA+LHRCFG+LLQKV  R YVR KIDWMY+QA+I  PTNRLGLAKA GLVAASHLDTVL+KLK ILDNVGQS  QRFLSFFS+  K  ++SDDIHA LALMYGYAA+YAPSTVIEARIDALVGTNMLSRLLHV++P AKQAVITAIDLLGRAVINAA NG SFPLK+RD +LDYI+TLMG DD+N D  DS++ELL TQ                           ATLG FALPN+P DVVNPLIDNLITLLCAIL+TSGEDGRSRAEQLL++L QID YVSS VDYQRRRGC+A +EMLLKFR +C++GYC +GC GSCTH KQ++R+L  N SNLPSAF LPSR AL LG+R+++YLPRCADTNSEVRK+SAQI+ QLFSISLSLPRP       + E+SY ALSSLEDVIAILRSDASIDPSEVFNR+VSSVC LLT DELVATL+ C+AAI DK KQSAEG IQAVVEFVTKRGN+L E                            AISS            +VLA AGRDIVTKDISRLRGGWPMQDAF+
Sbjct:  224 SAFELLLKVWASSRDLKIRLSSVDALGQMVGLITRTQLKAALPRLVPTILELYKKDQDIALLATSSLHSLLSATLLSESGPPLLDFEELTVVLSSLLPVVCINNDSKENSDYSVGLKTYNEVQHCFLTVGLVYSEDLFMFLLNKCRLKEEPLTFGALCVLKHLLPRLSEAWHNKRPLLVETVKFLLDEQNLGVRKALSELIVVMASHCYLVGVSGELFVEYLVRHCALTDQDDNDHQRSKEVSVSGKAYVPSQRKRLEVKIGSVCLIELRAICEKGLLLLTITIPEMEHILWPFLLKMIIPRVYTGAVATVCRCISELFRHQSLNGNAMLNECKARADLPNPEELFARLLVLLHDPLARDQLATQILTVICYLAPLFPKNINLFWQDEIPKMKAYVSDTEDLKQDPMYQETWDDMIINFLAESLDVIQDAEWVISLGNAFTRQYELYTTDDEHSAVLHRCFGILLQKVSDRGYVRNKIDWMYRQANITIPTNRLGLAKAFGLVAASHLDTVLDKLKDILDNVGQSIFQRFLSFFSDSFKP-EESDDIHAGLALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHPTAKQAVITAIDLLGRAVINAADNGASFPLKRRDQMLDYILTLMGRDDNNEDFADSTLELLRTQALALSACTTLVSVEPKLTIETRNHVLKATLGFFALPNDPMDVVNPLIDNLITLLCAILLTSGEDGRSRAEQLLHILRQIDLYVSSSVDYQRRRGCIAVHEMLLKFRMMCISGYCALGCQGSCTHSKQIDRTLHGNFSNLPSAFVLPSRAALCLGDRVIAYLPRCADTNSEVRKVSAQILDQLFSISLSLPRPAASKFSPDIELSYSALSSLEDVIAILRSDASIDPSEVFNRIVSSVCILLTKDELVATLNGCTAAICDKSKQSAEGTIQAVVEFVTKRGNELTEIDVSRTTQSLLAATNHVTDKHLRLETLGAISSLAENTSTKVVFNDVLAMAGRDIVTKDISRLRGGWPMQDAFH 1232

HSP 2 Score: 371.703 bits (953), Expect = 1.795e-104
Identity = 194/335 (57.91%), Postives = 248/335 (74.03%), Query Frame = 0
 
Query:  922 ISLILSKYLNRTLNVQREAAAAALSEFARYSEGLSSLLEEIVEALCRHVSDDSPTVRRLCLKGLVQMSSIHVNQYTTQVLGVILALLDDSNESVQLTAVSCLLMVLESSPNDAVEPILLSLSVRLRNLQVCMNMKIRAHAFAAFGTLSKYGIGELRDPFIEQVHAVFPRLVLHIHDEDRSVRQACQNTLKRVADLVGMEEMTVLFSTHRISSDHRTDYEDFLRDIAKQITQNLASRSSTYMASIV------------------------------------QVFSVLVGQTSQSAHEIVRATCTSAIGLLLKASNPSSWRNARLDQLESSRNSHE 1220
            I L+LSK L+R    QREAAAAA SEF RYS G  SLLE++VE LC+HVSD+S TVRRLCL+GLVQ+ SIH+ +YT QVLGVILALLDDS+ESVQLTAVSCLL +LES+P+DAVEP+L++LSVRLRNLQVCMN K+RA+AFAAFG LS +G+G  RDPF+EQ+H   PRL+LH+HD+D  VRQAC+NT+K+++ L+ ME ++VL S H  +SDHR+DYEDF+R+ +KQ  Q+L SR  T MASI+                                    QVF VLVG+ S+S+  +VRATC+SAIGLLLK++N  SWR  RLD+++S+R  ++
Sbjct: 1390 ICLLLSKSLDRQQKYQREAAAAASSEFVRYSGGFGSLLEQMVEVLCQHVSDESSTVRRLCLRGLVQIPSIHILRYTAQVLGVILALLDDSDESVQLTAVSCLLTILESAPSDAVEPVLINLSVRLRNLQVCMNSKMRANAFAAFGVLSNFGVGVQRDPFLEQIHIALPRLILHLHDDDVGVRQACRNTVKQISLLLEMEGLSVLLSLHCFNSDHRSDYEDFVREFSKQFVQHLPSRVDTCMASIIKVFDAPWPVIQANAIYFSSSMLSFSDDQHILARHFTQVFGVLVGKMSRSSDAVVRATCSSAIGLLLKSTNSISWRADRLDRVDSNRRGND 1724

HSP 3 Score: 134.035 bits (336), Expect = 7.440e-29
Identity = 57/81 (70.37%), Postives = 72/81 (88.89%), Query Frame = 0
 
Query:   47 DCCSTVSRGGRRRFRNISGVYQVMSFAIRALNKDDVDPSYMTRIAKLVTSELISSKELNADWQRAAAGVLVSIGSHCPDLV 127
            DCC +VSRGGRRRF N++GV+QVM+F +RAL+K D DPS+MT++AK+ T+E+ISSKELN DWQRAAA +LVSIGSH PDL+
Sbjct:   51 DCCCSVSRGGRRRFGNMAGVFQVMAFGVRALDKKDADPSFMTKLAKIATAEMISSKELNTDWQRAAAWLLVSIGSHFPDLM 131
[Close]
BLAST of DCAR_020802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J6I6V0 ((Uncharacterized protein {ECO:0000313|EMBL:KAF4403332.1}))

HSP 1 Score: 1146.72 bits (2965), Expect = 0.000e+0
Identity = 620/1010 (61.39%), Postives = 712/1010 (70.50%), Query Frame = 0
 
Query:  111 AAAGVLVSIGSHCPDL-VRTSTVEALGQMVGLVARLQLKAALPRLVPTILELYGKDQEVSFLATCSLYNLLNASLLSESGP-LLEFEDVKVILSSLLPVICSYNDNNDRSDFSMGLKTYNKVQHCFLTVGMVYSEELFL--------------------------------------------FLLN------------LIMVMASHCYLVGSSGELFVEYLVRNCAMSDKERDNLESFKEYSRSGSSYYSFQYKRLELKIG-VCPSELRAISEKGLLLITITIPEME----------------------------ELF---------------------------ARLLVLLHDPLAREQLATQILT--------------------IPKMKAYVSDTEDLKQDPSYQETWDDMIVHFLAESLDVVQDNNWIISLGNAFAEQYELYTFDDDHSALLHRCFGMLLQKVDSRSYVREKIDWMYKQADIACPTNRLGLAKAVGLVAASHLDTVLEKLKSILDNVGQSFVQRFLSFFSERAKHMDDSDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVQNPKAKQAVITAIDLLGRAVINAAGNGISFPLKKRDLLLDYIVTLMGLDDDN-DIYDSSIELLHTQ---------------------------ATLGLFALPNEPSDVVNPLIDNLITLLCAILVTSGEDGRSRAEQLLYLLGQIDQYVSSPVDYQRRRGCLAAYEMLLKFRTLCVTGYCPVGCAGSCTHIKQVNRSLQRN-SNLPSAFTLPSRDALGLGNRIVSYLPRCADTNSEVRKISAQIIGQLFSISLSLPRPVPHTSVTNSEMSYGALSSLEDVIAILRSDASIDPSEVFNRVVSSVCTLLTTDELVATLSNCSAAISDKIKQSAEGAIQAVVEFVTKRGNDLNE---------------------------SAISS------------EVLASAGRDIVTKDISRLRGGWPMQDAFY 918
            +A  +L+ + +   DL +R S+V+ALGQMVGL+ R QLKAALPRLVPTILELY KDQ+++ LAT SL++LL+A+LLSESGP LL+FE++ V+LSSLLPV+C  ND+ + SD+S+GLKTYN+VQHCFLTVG+VYSE+LF+                                            FLL+            LI+VMASHCYLVG SGELFVEYLVR+CA++D++ ++ +  KE S SG +Y   Q KRLE+KIG VC  ELRAI EKGLLL+TITIPEME                            ELF                           ARLLVLLHDPLAR+QLATQILT                    IPKMKAYVSDTEDLKQDP YQETWDDMI++FLAESLDV+QD  W+ISLGNAF  QYELYT DD+HSA+LHRCFG+LLQKV  R YVR KIDWMY+QA+I  PTNRLGLAKA GLVAASHLDTVL+KLK ILDNVGQS  QRFLSFFS+  K  ++SDDIHA LALMYGYAA+YAPSTVIEARIDALVGTNMLSRLLHV++P AKQAVITAIDLLGRAVINAA NG SFPLK+RD +LDYI+TLMG DD+N D  DS++ELL TQ                           ATLG FALPN+P DVVNPLIDNLITLLCAIL+TSGEDGRSRAEQLL++L QID YVSS VDYQRRRGC+A +EMLLKFR +C++GYC +GC GSCTH KQ++R+L  N SNLPSAF LPSR AL LG+R+++YLPRCADTNSEVRK+SAQI+ QLFSISLSLPRP       + E+SY ALSSLEDVIAILRSDASIDPSEVFNR+VSSVC LLT DELVATL+ C+AAI DK KQSAEG IQAVVEFVTKRGN+L E                            AISS            +VLA AGRDIVTKDISRLRGGWPMQDAF+
Sbjct:  224 SAFELLLKVWASSRDLKIRLSSVDALGQMVGLITRTQLKAALPRLVPTILELYKKDQDIALLATSSLHSLLSATLLSESGPPLLDFEELTVVLSSLLPVVCINNDSKENSDYSVGLKTYNEVQHCFLTVGLVYSEDLFMFLLNKCRLKEEPLTFGALCVLKHLLPRLSEAWHNKRPLLVETVKFLLDEQNLGVRKALSELIVVMASHCYLVGVSGELFVEYLVRHCALTDQDDNDHQRSKEVSVSGKAYVPSQRKRLEVKIGSVCLIELRAICEKGLLLLTITIPEMEHILWPFLLKMIIPRVYTGAVATVCRCISELFRHQSLNGNAMLNECKARADLPNPEELFARLLVLLHDPLARDQLATQILTVICYLAPLFPKNINLFWQDEIPKMKAYVSDTEDLKQDPMYQETWDDMIINFLAESLDVIQDAEWVISLGNAFTRQYELYTTDDEHSAVLHRCFGILLQKVSDRGYVRNKIDWMYRQANITIPTNRLGLAKAFGLVAASHLDTVLDKLKDILDNVGQSIFQRFLSFFSDSFKP-EESDDIHAGLALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHPTAKQAVITAIDLLGRAVINAADNGASFPLKRRDQMLDYILTLMGRDDNNEDFADSTLELLRTQALALSACTTLVSVEPKLTIETRNHVLKATLGFFALPNDPVDVVNPLIDNLITLLCAILLTSGEDGRSRAEQLLHILRQIDLYVSSSVDYQRRRGCIAVHEMLLKFRMMCISGYCALGCQGSCTHSKQIDRTLHGNFSNLPSAFVLPSRAALCLGDRVIAYLPRCADTNSEVRKVSAQILDQLFSISLSLPRPAASKFSPDIELSYSALSSLEDVIAILRSDASIDPSEVFNRIVSSVCILLTKDELVATLNGCTAAICDKSKQSAEGTIQAVVEFVTKRGNELTEIDVSRTTQSLLAATNHVTDKHLRLETLGAISSLAENTSTKVVFNDVLAMAGRDIVTKDISRLRGGWPMQDAFH 1232

HSP 2 Score: 370.548 bits (950), Expect = 3.810e-104
Identity = 194/335 (57.91%), Postives = 247/335 (73.73%), Query Frame = 0
 
Query:  922 ISLILSKYLNRTLNVQREAAAAALSEFARYSEGLSSLLEEIVEALCRHVSDDSPTVRRLCLKGLVQMSSIHVNQYTTQVLGVILALLDDSNESVQLTAVSCLLMVLESSPNDAVEPILLSLSVRLRNLQVCMNMKIRAHAFAAFGTLSKYGIGELRDPFIEQVHAVFPRLVLHIHDEDRSVRQACQNTLKRVADLVGMEEMTVLFSTHRISSDHRTDYEDFLRDIAKQITQNLASRSSTYMASIV------------------------------------QVFSVLVGQTSQSAHEIVRATCTSAIGLLLKASNPSSWRNARLDQLESSRNSHE 1220
            I L+LSK L+R    QREAAAAA SEF RYS G  SLLE++VE LC+HVSD+S TVRRLCL+GLVQ+ SIH+ +YT QVLGVILALLDDS+ESVQLTAVSCLL +LES+P+DAVEP+L++LSVRLRNLQVCMN K+RA+AFAAFG L+ +G+G  RDP +EQ+H   PRLVLH+HD+D  VRQAC+NT+K++A L+ ME ++VL S H  +SDHR+DYEDF+R+ +KQ  Q+L SR  T MASI+                                    QVF VLVG+ S+S+  +VRATC+SAIGLLLK++N  SWR  RLD+++S+R  ++
Sbjct: 1390 ICLLLSKSLDRQQKYQREAAAAASSEFVRYSGGFGSLLEQMVEVLCQHVSDESSTVRRLCLRGLVQIPSIHILRYTAQVLGVILALLDDSDESVQLTAVSCLLTILESAPSDAVEPVLINLSVRLRNLQVCMNSKMRANAFAAFGVLTNFGVGVQRDPLLEQIHIALPRLVLHLHDDDVGVRQACRNTVKQIAPLLEMEGLSVLLSLHCFNSDHRSDYEDFVREFSKQFVQHLPSRVDTCMASIIKVFDAPWPAIQANAIYFSSSMLSFSDDQHILARHFTQVFGVLVGKMSRSSDAVVRATCSSAIGLLLKSTNSISWRADRLDRVDSNRRGND 1724

HSP 3 Score: 132.88 bits (333), Expect = 2.150e-28
Identity = 56/81 (69.14%), Postives = 72/81 (88.89%), Query Frame = 0
 
Query:   47 DCCSTVSRGGRRRFRNISGVYQVMSFAIRALNKDDVDPSYMTRIAKLVTSELISSKELNADWQRAAAGVLVSIGSHCPDLV 127
            DCC +VSRGGRRRF N++GV+QVM++ +RAL+K D DPS+MT++AK+ T+E+ISSKELN DWQRAAA +LVSIGSH PDL+
Sbjct:   51 DCCCSVSRGGRRRFGNMAGVFQVMAYGVRALDKKDADPSFMTKLAKIATAEMISSKELNTDWQRAAAWLLVSIGSHFPDLM 131
[Close]
BLAST of DCAR_020802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6RFZ0 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8098392.1}))

HSP 1 Score: 1144.41 bits (2959), Expect = 0.000e+0
Identity = 610/995 (61.31%), Postives = 701/995 (70.45%), Query Frame = 0
 
Query:  127 VRTSTVEALGQMVGLVARLQLKAALPRLVPTILELYGKDQEVSFLATCSLYNLLNASLLSESGP-LLEFEDVKVILSSLLPVICSYNDNNDRSDFSMGLKTYNKVQHCFLTVGMVYSEELFL--------------------------------------------FLLN------------LIMVMASHCYLVGSSGELFVEYLVRNCAMSDKERDNLESFKEYSRSGSSYYSFQYKRLELKIG-VCPSELRAISEKGLLL--ITIT-----------------------------------------------------IPEMEELFARLLVLLHDPLAREQLATQILT--------------------IPKMKAYVSDTEDLKQDPSYQETWDDMIVHFLAESLDVVQDNNWIISLGNAFAEQYELYTFDDDHSALLHRCFGMLLQKVDSRSYVREKIDWMYKQADIACPTNRLGLAKAVGLVAASHLDTVLEKLKSILDNVGQSFVQRFLSFFSERAKHMDDSDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVQNPKAKQAVITAIDLLGRAVINAAGNGISFPLKKRDLLLDYIVTLMG---LDDDNDIYDSSIELLHTQ---------------------------ATLGLFALPNEPSDVVNPLIDNLITLLCAILVTSGEDGRSRAEQLLYLLGQIDQYVSSPVDYQRRRGCLAAYEMLLKFRTLCVTGYCPVGCAGSCTHIKQVNRSLQRN-SNLPSAFTLPSRDALGLGNRIVSYLPRCADTNSEVRKISAQIIGQLFSISLSLPRPVPHTSVTNSEMSYGALSSLEDVIAILRSDASIDPSEVFNRVVSSVCTLLTTDELVATLSNCSAAISDKIKQSAEGAIQAVVEFVTKRGNDLNESAIS---------------------------------------SEVLASAGRDIVTKDISRLRGGWPMQDAFY 918
            VR S+VEALGQMVGLV R QLK ALPRLVPTILELY KDQ+++FLATCSL++LLNASLLSESGP LL+FED+  ILS+LLPV+C   D+ + SDFS+ LKTYN+VQ CFLTVG VYSE+LF+                                            FLL+            LI+VMASHCYLVG SGELFVEYLVR+C++ D++R  L+S KE   S S+Y   QYKRLE+KIG VCP ELRAI EKGLLL  ITI                                                      IP  EELFARL+VLLHDPLAREQLAT IL                     IPKMKAYVSDTEDLKQDP YQETWDDMI++FLAESLDV+QD NW+ISLGNAF +QYELYT DD+HSALLHRC G+LLQKV+ R+YVR+K+DWMYKQA++A P NRLGLAKA+GLVAASHLDTVL+KLK ILDN+GQS  QRFLSFFS+  K  ++SDDIHAALALMYGYAA+YAPSTVIEARIDAL+GTNMLSRLLHV++P AKQAVITAIDLLGRAVINAA NG SF LK+RD++LDYI+TLMG    DD+    DS++ELLHTQ                           ATLG FALPN+P DVVNPLIDNLITLLCAIL+TSGEDGRSRAEQLL++L QIDQYVSSP++YQRRRGC A +EMLLKFR +C++GYC +GC GSCTH KQV+R++  N SNLPSAF LPSR+AL LG+R+V YLPRCADT+SEVRK+SA I+ QLFSISLSLPRP       + E+SYGALSSLEDVIAIL+SD SIDPSEVFNR++SSVC LLT DELVATL  C++AI DKIKQSAEG +QA++EFVTKRGN+L+ES IS                                       +EVLA+AGRDIVTKDISRLRGGW MQDAFY
Sbjct:  241 VRISSVEALGQMVGLVTRTQLKTALPRLVPTILELYKKDQDIAFLATCSLHSLLNASLLSESGPPLLDFEDLTFILSTLLPVVCINGDSKEHSDFSVALKTYNEVQRCFLTVGFVYSEDLFMFLLNKCRLKEQPLTFGALSVLKHLLPRLSEAWHSKRPLLVEAVNFLLDEQNLGVRKALAELIVVMASHCYLVGPSGELFVEYLVRHCSLPDQDRSELQSSKEVFVSSSTYSPPQYKRLEVKIGAVCPMELRAICEKGLLLLTITIPEMEHILWPFLLKMIIPRDYTGAAATVCRCISELCRHKSSYSDTMLSECKARSDIPNPEELFARLVVLLHDPLAREQLATHILMVLCYLAPLFPKNINMFWQDEIPKMKAYVSDTEDLKQDPFYQETWDDMIINFLAESLDVIQDANWVISLGNAFTKQYELYTSDDEHSALLHRCLGVLLQKVNDRAYVRDKMDWMYKQANVAIPMNRLGLAKAMGLVAASHLDTVLDKLKEILDNIGQSIFQRFLSFFSDSFK-TEESDDIHAALALMYGYAAKYAPSTVIEARIDALIGTNMLSRLLHVRHPTAKQAVITAIDLLGRAVINAAENGASFSLKRRDIMLDYILTLMGREAQDDNEGFVDSNLELLHTQALALSACTTLVSVEPKLTIETRNHVMKATLGFFALPNDPGDVVNPLIDNLITLLCAILLTSGEDGRSRAEQLLHMLRQIDQYVSSPMEYQRRRGCRAVHEMLLKFRMVCISGYCTLGCYGSCTHGKQVDRAIHGNFSNLPSAFVLPSREALCLGDRVVMYLPRCADTDSEVRKVSALILDQLFSISLSLPRPAASNFGMDMEVSYGALSSLEDVIAILKSDTSIDPSEVFNRIISSVCILLTKDELVATLHGCTSAICDKIKQSAEGVLQAIIEFVTKRGNELSESDISRTTQSLLSATVHVTEKHLRMEILGAISSLAENTSSKIVFNEVLAAAGRDIVTKDISRLRGGWSMQDAFY 1234

HSP 2 Score: 337.035 bits (863), Expect = 8.217e-93
Identity = 202/344 (58.72%), Postives = 250/344 (72.67%), Query Frame = 0
 
Query:  919 IPGISLILSKYLNRTLNVQREAAAAALSEFARYSEGLSSLLEEIVEALCRHVSDDSPTVRRLCLKGLVQMSSIHVNQYTTQVLGVILALLDDSNESVQLTAVSCLLMVLESSPNDA-VEPILLSLSVRLRNLQVCMNMKIRAHAFAAFGTLSKYGIGELRDPFIEQVHAVFPRLVLHIHDEDRSVRQACQNTLKRVADLVGMEEMTVLFSTHRISSDHRTDYEDFLRDIAKQITQNLASRSSTYMASIV------------------------------------QVFSVLVGQTSQSAHEIVRATCTSAIGLLLKASNPSSWRNARLDQLESSRNSHESDSSR 1225
            +  I +ILSK LNR    QR+AAAAALSEF RYS G  +LLEE+VE LCRHVSDD+PTVRRLCL+GLVQ+ SIH+ QYT+QVLGVILALLDD +E VQLTAVSCLL +LESSPNDA VEP+LL+LS+RLRNLQ+CMN  +RA+AFAAFG LS YG G   + F+EQVHA  PRLVLH+HD+D +VRQAC+NT KR++ L+  + +  +F+TH  +SDHR DYEDF+RD+ KQ+ Q+L SR  TYMAS +                                    QVF +LVG+ S+SA  IVRAT +SA+GLLLK+SNP SWR  RLD+ +SSR +HES+S +
Sbjct: 1389 VESICIILSKSLNRQQRYQRQAAAAALSEFVRYSGGFGALLEEMVELLCRHVSDDAPTVRRLCLRGLVQIPSIHILQYTSQVLGVILALLDDLDELVQLTAVSCLLKILESSPNDAAVEPVLLNLSLRLRNLQICMNTMMRANAFAAFGALSNYGFGAQHEAFLEQVHAAIPRLVLHLHDDDINVRQACRNTFKRISPLLETQGLVSVFNTHCFNSDHRGDYEDFVRDLTKQLAQHLPSRVDTYMASTIQAFDTPWPIIQANAVYFSSSMLSISDDQNILSRYYTQVFGILVGKLSRSADAIVRATSSSALGLLLKSSNPLSWRVDRLDRTDSSRRAHESESPK 1732

HSP 3 Score: 136.732 bits (343), Expect = 1.123e-29
Identity = 67/129 (51.94%), Postives = 90/129 (69.77%), Query Frame = 0
 
Query:   47 DCCSTVSRGGRRRFRNISGVYQVMSFAIRALNKDDVDPSYMTRIAKLVTSELISSKELNADWQRAAAGVLVSIGSHCPDLVR-------TSTVEALGQMVGLVARL----------QLKAALPRLVPTI 158
            DCC  VSRGGRRRF N++GV+QVM+F +RAL+K DVDP +M ++AK+ T+E+ISSKELNADWQRAA+G+LVSIGSH PDL+        + +  AL  MV ++A            +LK  L R++P +
Sbjct:   51 DCCWAVSRGGRRRFGNMAGVFQVMAFGVRALDKKDVDPPFMAKLAKIATAEMISSKELNADWQRAASGLLVSIGSHLPDLMMEEIFIHLSGSNPALPAMVQILADFAAADVLQFTPRLKGVLSRVLPIL 179
[Close]
BLAST of DCAR_020802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A6KNJ3 ((Uncharacterized protein {ECO:0000313|EMBL:KAF2289845.1}))

HSP 1 Score: 1134.4 bits (2933), Expect = 0.000e+0
Identity = 612/992 (61.69%), Postives = 696/992 (70.16%), Query Frame = 0
 
Query:  127 VRTSTVEALGQMVGLVARLQLKAALPRLVPTILELYGKDQEVSFLATCSLYNLLNASLLSESGP-LLEFEDVKVILSSLLPVICSYNDNNDRSDFSMGLKTYNKVQHCFLTVGMVY--------------SEELFLF------------------------------------------LLNLIMVMASHCYLVGSSGELFVEYLVRNCAMSDKERDNLESFKEYSRSGSSYYSFQYKRLELKIG-VCPSELRAISEKGLL----------------LITITIPEM---------------------------------------EELFARLLVLLHDPLAREQLATQILT--------------------IPKMKAYVSDTEDLKQDPSYQETWDDMIVHFLAESLDVVQDNNWIISLGNAFAEQYELYTFDDDHSALLHRCFGMLLQKVDSRSYVREKIDWMYKQADIACPTNRLGLAKAVGLVAASHLDTVLEKLKSILDNVGQSFVQRFLSFFSERAKHMDDSDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVQNPKAKQAVITAIDLLGRAVINAAGNGISFPLKKRDLLLDYIVTLMGLDDDNDIYDSSIELLHTQ---------------------------ATLGLFALPNEPSDVVNPLIDNLITLLCAILVTSGEDGRSRAEQLLYLLGQIDQYVSSPVDYQRRRGCLAAYEMLLKFRTLCVTGYCPVGCAGSCTHIKQVNRSLQRN-SNLPSAFTLPSRDALGLGNRIVSYLPRCADTNSEVRKISAQIIGQLFSISLSLPRPVPHTSVTNSEMSYGALSSLEDVIAILRSDASIDPSEVFNRVVSSVCTLLTTDELVATLSNCSAAISDKIKQSAEGAIQAVVEFVTKRGNDLNES---------------------------AISS------------EVLASAGRDIVTKDISRLRGGWPMQDAFY 918
            VRTS+VEALGQMVGL+ R QLKAALPRLVPT+LELY KDQ+++ LAT SL+NLLNASLLSE+GP LL+FED+ VILS+LLPV+C  ND+ + SDFS+GLKTYN+VQ CFLTVG+VY               EE   F                                          L  LI+VMASHCYLVG SGELFVEYLVR+CA+SD +R++ E+ K                  +K+G  CP ELRAI EKGLL                L+T+ IP +                                       EELFARLLVLLHDPL REQLATQILT                    IPKMKAYVSDTEDLK DPSYQETWDDMI++FL+ESLDV+QD +W+ISLGNAF  QYELYT DD+H+ALLHRC GMLLQKVD+R+YVR KIDWMYKQA+IA PTNRLGLAKA+GLVAASHLDTVL+KLK IL NVGQS  QR LSFFS+  K  ++SDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHV++P AKQAVITAIDLLGRAVINAA NG SFPLK+RD LLDYI+TLMG D+++ + DSS+ELLHTQ                           ATLG FALPNEP DVVNPLIDNLITLLCAIL+TSGEDGRSRAEQLL++L QIDQYVSSPVDYQRRRGCLA +EMLLKFR LCV+GYC +GC GSCTH KQ++R+L  N SNLPSAF LPSR+AL LG R++ YLPRCADTNSEVRK+SAQI+ QLFSISLSLP+PV  ++  + E+SYGALSSLEDVIAILRSDASIDPSEVFNR+VSS+C LLT +ELVATL  C+AAI DKIKQSAEGAIQAV+EFV+KRG +L+E+                           AISS            E+LASA RDIVTKDISRLRGGWPMQ+AFY
Sbjct:  250 VRTSSVEALGQMVGLITRTQLKAALPRLVPTVLELYKKDQDIALLATSSLHNLLNASLLSETGPPLLDFEDLTVILSTLLPVVCINNDSKEHSDFSVGLKTYNEVQRCFLTVGLVYPDDLFAFLLNKCRLKEESLTFGSLCVLKHLLPRSSEAWYNKRPLLVEAVKSLLDEQNLGVRMALSELIVVMASHCYLVGPSGELFVEYLVRHCALSDVDRNDPENSK------------------VKLGRFCPIELRAICEKGLLLITITIPEMEHILWPFLLTMIIPRVYTAAVATVCRCISELCRHRSSNISSMLSECKARADIPSPEELFARLLVLLHDPLVREQLATQILTVLCYLAPLFPKNINLFWQDEIPKMKAYVSDTEDLKLDPSYQETWDDMIINFLSESLDVIQDPDWVISLGNAFTNQYELYTPDDEHAALLHRCLGMLLQKVDNRAYVRNKIDWMYKQANIAIPTNRLGLAKAMGLVAASHLDTVLDKLKDILANVGQSIFQRLLSFFSDSYK-TEESDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVRHPTAKQAVITAIDLLGRAVINAAENGASFPLKRRDQLLDYILTLMGRDENDGVADSSLELLHTQALALSACTTLVSVEPKLTIETRNHVMKATLGFFALPNEPVDVVNPLIDNLITLLCAILLTSGEDGRSRAEQLLHILRQIDQYVSSPVDYQRRRGCLAVHEMLLKFRMLCVSGYCALGCHGSCTHSKQIDRTLHGNFSNLPSAFVLPSREALCLGERVIMYLPRCADTNSEVRKVSAQILDQLFSISLSLPKPVGSSTGVDVELSYGALSSLEDVIAILRSDASIDPSEVFNRIVSSICILLTKNELVATLHGCTAAICDKIKQSAEGAIQAVIEFVSKRGKELSETDVTRTTQSLLSAVVHVTEKHLRLETLGAISSLAENTSSKIVFDELLASAARDIVTKDISRLRGGWPMQEAFY 1222

HSP 2 Score: 410.223 bits (1053), Expect = 2.947e-117
Identity = 208/340 (61.18%), Postives = 250/340 (73.53%), Query Frame = 0
 
Query:  922 ISLILSKYLNRTLNVQREAAAAALSEFARYSEGLSSLLEEIVEALCRHVSDDSPTVRRLCLKGLVQMSSIHVNQYTTQVLGVILALLDDSNESVQLTAVSCLLMVLESSPNDAVEPILLSLSVRLRNLQVCMNMKIRAHAFAAFGTLSKYGIGELRDPFIEQVHAVFPRLVLHIHDEDRSVRQACQNTLKRVADLVGMEEMTVLFSTHRISSDHRTDYEDFLRDIAKQITQNLASRSSTYMASIVQ------------------------------------VFSVLVGQTSQSAHEIVRATCTSAIGLLLKASNPSSWRNARLDQLESSRNSHESDSSR 1225
            ISLIL+K LNR    QREAAAAALSEF RYS G SSLLE++VEALCRHVSD+SPTVR LCL+GLVQ+ SIH+ QYTTQ+LGVI+ALLDD +ESVQLTAVSCLL VLESSP+DAVEPILL+LSVRLRNLQ+C+N KIR+ AFAAFGTLS YG+G   + F+EQ+HA  PRL+LH+HDED SVRQAC+NTLKR+  L+ ME +  L +    +SDHR DYEDFLRD  +QI Q+L SR  TYM S +Q                                    VF +LVG+ S+SA  +VRATC+SA+GLLLK++N  SWR ARLD++ES R  H+S+S R
Sbjct: 1380 ISLILTKSLNRHQRFQREAAAAALSEFVRYSGGFSSLLEQMVEALCRHVSDESPTVRCLCLRGLVQIPSIHIYQYTTQILGVIVALLDDLDESVQLTAVSCLLTVLESSPSDAVEPILLNLSVRLRNLQICLNTKIRSTAFAAFGTLSSYGVGAHHEIFLEQIHAAIPRLILHLHDEDISVRQACRNTLKRITPLMEMEGLATLLNLQYFTSDHRNDYEDFLRDFTRQIAQHLPSRVDTYMVSTIQALDAPWPIIQANAIYLASSMLSLSDDQRILALYYTKVFGMLVGKISRSADAVVRATCSSALGLLLKSTNSLSWRTARLDRVESFRRGHDSESKR 1719

HSP 3 Score: 139.043 bits (349), Expect = 2.350e-30
Identity = 69/129 (53.49%), Postives = 89/129 (68.99%), Query Frame = 0
 
Query:   47 DCCSTVSRGGRRRFRNISGVYQVMSFAIRALNKDDVDPSYMTRIAKLVTSELISSKELNADWQRAAAGVLVSIGSHCPDLVR-------TSTVEALGQMVGLVARL----------QLKAALPRLVPTI 158
            DCCS VSRGGRRRF N++GV+QVM+  +RAL+K DVDPSYM ++AK+ T+E+ISSKELNADWQRAAAG+L SIGSH PDL+        +    AL  MV ++A            +LK  L R++P +
Sbjct:   60 DCCSAVSRGGRRRFWNVAGVFQVMALGVRALDKRDVDPSYMAKLAKIATTEMISSKELNADWQRAAAGLLASIGSHLPDLMMEEIFLHLSGPSSALPAMVQILADFASADALQFTPRLKGVLSRVLPIL 188
[Close]
BLAST of DCAR_020802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5SY47 ((protein SHOOT GRAVITROPISM 6 isoform X1 {ECO:0000313|RefSeq:XP_021821730.1}))

HSP 1 Score: 1133.24 bits (2930), Expect = 0.000e+0
Identity = 611/991 (61.65%), Postives = 705/991 (71.14%), Query Frame = 0
 
Query:  127 VRTSTVEALGQMVGLVARLQLKAALPRLVPTILELYGKDQEVSFLATCSLYNLLNASLLSESGP-LLEFEDVKVILSSLLPVICSYNDNNDRSDFSMGLKTYNKVQHCFLTVGMVYSEELFL--------------------------------------------FLLN------------LIMVMASHCYLVGSSGELFVEYLVRNCAMSDKERDNLESFKEYSRSGSSYYSFQYKRLELKIG-VCPSELRAISEKGLLL--ITIT----------------------------------------------------IPEMEELFARLLVLLHDPLAREQLATQILT--------------------IPKMKAYVSDTEDLKQDPSYQETWDDMIVHFLAESLDVVQDNNWIISLGNAFAEQYELYTFDDDHSALLHRCFGMLLQKVDSRSYVREKIDWMYKQADIACPTNRLGLAKAVGLVAASHLDTVLEKLKSILDNVGQSFVQRFLSFFSERAKHMDDSDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVQNPKAKQAVITAIDLLGRAVINAAGNGISFPLKKRDLLLDYIVTLMGLDDDNDIYDSSIELLHTQ---------------------------ATLGLFALPNEPSDVVNPLIDNLITLLCAILVTSGEDGRSRAEQLLYLLGQIDQYVSSPVDYQRRRGCLAAYEMLLKFRTLCVTGYCPVGCAGSCTHIKQVNRSLQRN-SNLPSAFTLPSRDALGLGNRIVSYLPRCADTNSEVRKISAQIIGQLFSISLSLPRPVPHTSVTNSEMSYGALSSLEDVIAILRSDASIDPSEVFNRVVSSVCTLLTTDELVATLSNCSAAISDKIKQSAEGAIQAVVEFVTKRGNDLNE---------------------------SAISS------------EVLASAGRDIVTKDISRLRGGWPMQDAFY 918
            VR S+VEALGQMVGL+ R QLKAALPRLVPTILELY +DQ+++FLATCSL NLL+ASLLSESGP LL+FE++ VILS+LLPV+C  NDN + SDFS+GLKTYN+VQ CFLTVG+VY E+LF+                                            FLL+            LI+VMASHCYL+G SGELFVEYLVR+CA++DK+ ++LE  K+   SG+ Y  FQYKRLE+KIG +CP+ELRAI EKGLLL  ITI                                                     IP  EELF RL+VLLHDPLAREQLA+QILT                    IPK+KAYVSDTEDLKQDPSYQETWDDMI++F AESLDV+QD++W+I  GNA  +QY LYT DD+HSALLHRCFG+ LQKV+ R+YVR+KIDWMYKQA+I  PTNRLGLAKA+GLVAASHLDTVLEKLK ILDNV QS  +RFLSFFS+  K  ++SDDIHAALALMYGYAA+YAPSTVIEARIDALVGTNMLSRLLHV++P AKQAVITAIDLLGRAVINAA NG SFPLK+RD +LDYI+TLMG DD     DSS+ELL TQ                           ATLG FALPN+P DVVNPLIDNLITLLCAIL+TSGEDGRSRAEQL ++L QIDQYVSSP+DYQRRRGCLA +EMLLKFRT+C+T +C +GC GSCTH K+ +R+L  N SNLPSAF LPSR+AL LG+R++ YLPRCADTNSEVR +SAQI+ QLFSISLSLPRP   +   + E+SY ALSSLEDVIAILRSDASIDPSEVFNR++SSVC LLT +ELVATL  C++AI DKIKQSAEGAIQAV+EFVT+RGN+L+E                           +AISS            EVLA++GRDIVTKDISRLRGGWPMQDAFY
Sbjct:  241 VRISSVEALGQMVGLITRAQLKAALPRLVPTILELYKRDQDIAFLATCSLNNLLHASLLSESGPPLLDFEELTVILSTLLPVVCINNDNKEHSDFSVGLKTYNEVQRCFLTVGLVYPEDLFVFLINKCRLKEEPLTFGALCVLKHLLPRLSEAWHCKRHNLVEAVQFLLDDQDLGVRKVLSELIVVMASHCYLIGPSGELFVEYLVRHCALTDKDSNDLERSKD--ASGNPYIPFQYKRLEVKIGTLCPAELRAICEKGLLLLTITIPEMEHILWPFLLKMIIPQAYTGAVAMVCRCISELCRHRSNSNTMLAECKARADIPNPEELFVRLVVLLHDPLAREQLASQILTVLCYLAPLFPKNINLFWQDEIPKLKAYVSDTEDLKQDPSYQETWDDMIINFFAESLDVIQDSDWVIPFGNAITKQYGLYTSDDEHSALLHRCFGVFLQKVNDRAYVRDKIDWMYKQANITIPTNRLGLAKAMGLVAASHLDTVLEKLKGILDNVEQSIFRRFLSFFSDDFK-TEESDDIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHPTAKQAVITAIDLLGRAVINAAENGSSFPLKRRDQMLDYILTLMGRDDSESFSDSSLELLDTQARALSACTTLVSVDPKLTIETRNHVLKATLGFFALPNDPIDVVNPLIDNLITLLCAILLTSGEDGRSRAEQLSHILRQIDQYVSSPMDYQRRRGCLAVHEMLLKFRTVCITAHCALGCQGSCTHNKKFDRNLHGNLSNLPSAFVLPSREALSLGDRVIMYLPRCADTNSEVRTVSAQILDQLFSISLSLPRPETSSYGVDIELSYSALSSLEDVIAILRSDASIDPSEVFNRIISSVCILLTKNELVATLHGCTSAICDKIKQSAEGAIQAVIEFVTRRGNELSEADVSRTTQALLMAANHVTEKHLRQETLAAISSLAESTSSKVVFNEVLATSGRDIVTKDISRLRGGWPMQDAFY 1228

HSP 2 Score: 412.92 bits (1060), Expect = 1.215e-118
Identity = 211/341 (61.88%), Postives = 251/341 (73.61%), Query Frame = 0
 
Query:  919 IPGISLILSKYLNRTLNVQREAAAAALSEFARYSEGLSSLLEEIVEALCRHVSDDSPTVRRLCLKGLVQMSSIHVNQYTTQVLGVILALLDDSNESVQLTAVSCLLMVLESSPNDAVEPILLSLSVRLRNLQVCMNMKIRAHAFAAFGTLSKYGIGELRDPFIEQVHAVFPRLVLHIHDEDRSVRQACQNTLKRVADLVGMEEMTVLFSTHRISSDHRTDYEDFLRDIAKQITQNLASRSSTYMASIVQ------------------------------------VFSVLVGQTSQSAHEIVRATCTSAIGLLLKASNPSSWRNARLDQLESSRNSHESDS 1223
            +  I +ILSK LNR    QREAAAAALSEF RYS+G  SLLE+IVE LCRHVSD+SPTVRRLCL+GLVQ+ SIH+ QYTTQVLGVILALLDDS+ESVQLTAVSCLL +LESSPNDAVEPILL+LSVRLRNLQ+CMN K+RA+AFAAFG LS YGIG   + F+EQVHA  PRLVLH+HD+D SVRQAC++TLKR+A L+ ME +  LF+ H  + DHRTDYEDF+RD+ KQ  Q+L SR  TYMAS +Q                                    VF  LVG+ S+S   +VRATC+SA+GLLLK S  SSW+ AR+D++ES R SH+S +
Sbjct: 1383 VQSICVILSKSLNRHQRYQREAAAAALSEFVRYSDGFGSLLEQIVEVLCRHVSDESPTVRRLCLRGLVQIPSIHMLQYTTQVLGVILALLDDSDESVQLTAVSCLLTMLESSPNDAVEPILLNLSVRLRNLQICMNPKMRANAFAAFGALSNYGIGAQHEAFLEQVHAAIPRLVLHLHDDDVSVRQACRSTLKRIAPLLEMEGLLPLFNMHCFNHDHRTDYEDFVRDLTKQFAQHLPSRVDTYMASTIQAFDAPWPIIQANAIYLSSCMLSLSDDQHILTLYYAQVFGTLVGKMSKSTDAVVRATCSSALGLLLKFSKSSSWKAARVDRVESGRRSHDSSA 1723

HSP 3 Score: 129.413 bits (324), Expect = 2.002e-27
Identity = 64/118 (54.24%), Postives = 84/118 (71.19%), Query Frame = 0
 
Query:   47 DCCSTVSRGGRRRFRNISGVYQVMSFAIRALNKDDVDPSYMTRIAKLVTSELISSKELNADWQRAAAGVLVSIGSHCPDLVRTSTV-------EALGQMVGLVARLQLKAAL---PRL 154
            DCCS  SRGGRRRF N++GV+QVM++ +RAL+KD+VDP +M++IAK+ T+E+ISSKELN +WQRAA+G+LVSIG H PDL+             AL  MV ++A      AL   PRL
Sbjct:   51 DCCSASSRGGRRRFGNMAGVFQVMAYGVRALDKDEVDPLFMSKIAKIATAEIISSKELNTNWQRAASGLLVSIGLHLPDLMMEEIFLHLPGPNSALPAMVQILADFAYADALQFTPRL 168
[Close]
BLAST of DCAR_020802 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P5T4A2 ((protein SHOOT GRAVITROPISM 6 isoform X2 {ECO:0000313|RefSeq:XP_021821738.1}))

HSP 1 Score: 1132.09 bits (2927), Expect = 0.000e+0
Identity = 611/991 (61.65%), Postives = 705/991 (71.14%), Query Frame = 0
 
Query:  127 VRTSTVEALGQMVGLVARLQLKAALPRLVPTILELYGKDQEVSFLATCSLYNLLNASLLSESGP-LLEFEDVKVILSSLLPVICSYNDNNDRSDFSMGLKTYNKVQHCFLTVGMVYSEELFL--------------------------------------------FLLN------------LIMVMASHCYLVGSSGELFVEYLVRNCAMSDKERDNLESFKEYSRSGSSYYSFQYKRLELKIG-VCPSELRAISEKGLLL--ITIT----------------------------------------------------IPEMEELFARLLVLLHDPLAREQLATQILT--------------------IPKMKAYVSDTEDLKQDPSYQETWDDMIVHFLAESLDVVQDNNWIISLGNAFAEQYELYTFDDDHSALLHRCFGMLLQKVDSRSYVREKIDWMYKQADIACPTNRLGLAKAVGLVAASHLDTVLEKLKSILDNVGQSFVQRFLSFFSERAKHMDDSDDIHAALALMYGYAARYAPSTVIEARIDALVGTNMLSRLLHVQNPKAKQAVITAIDLLGRAVINAAGNGISFPLKKRDLLLDYIVTLMGLDDDNDIYDSSIELLHTQ---------------------------ATLGLFALPNEPSDVVNPLIDNLITLLCAILVTSGEDGRSRAEQLLYLLGQIDQYVSSPVDYQRRRGCLAAYEMLLKFRTLCVTGYCPVGCAGSCTHIKQVNRSLQRN-SNLPSAFTLPSRDALGLGNRIVSYLPRCADTNSEVRKISAQIIGQLFSISLSLPRPVPHTSVTNSEMSYGALSSLEDVIAILRSDASIDPSEVFNRVVSSVCTLLTTDELVATLSNCSAAISDKIKQSAEGAIQAVVEFVTKRGNDLNE---------------------------SAISS------------EVLASAGRDIVTKDISRLRGGWPMQDAFY 918
            VR S+VEALGQMVGL+ R QLKAALPRLVPTILELY +DQ+++FLATCSL NLL+ASLLSESGP LL+FE++ VILS+LLPV+C  NDN + SDFS+GLKTYN+VQ CFLTVG+VY E+LF+                                            FLL+            LI+VMASHCYL+G SGELFVEYLVR+CA++DK+ ++LE  K+   SG+ Y  FQYKRLE+KIG +CP+ELRAI EKGLLL  ITI                                                     IP  EELF RL+VLLHDPLAREQLA+QILT                    IPK+KAYVSDTEDLKQDPSYQETWDDMI++F AESLDV+QD++W+I  GNA  +QY LYT DD+HSALLHRCFG+ LQKV+ R+YVR+KIDWMYKQA+I  PTNRLGLAKA+GLVAASHLDTVLEKLK ILDNV QS  +RFLSFFS+  K  ++SDDIHAALALMYGYAA+YAPSTVIEARIDALVGTNMLSRLLHV++P AKQAVITAIDLLGRAVINAA NG SFPLK+RD +LDYI+TLMG DD     DSS+ELL TQ                           ATLG FALPN+P DVVNPLIDNLITLLCAIL+TSGEDGRSRAEQL ++L QIDQYVSSP+DYQRRRGCLA +EMLLKFRT+C+T +C +GC GSCTH K+ +R+L  N SNLPSAF LPSR+AL LG+R++ YLPRCADTNSEVR +SAQI+ QLFSISLSLPRP   +   + E+SY ALSSLEDVIAILRSDASIDPSEVFNR++SSVC LLT +ELVATL  C++AI DKIKQSAEGAIQAV+EFVT+RGN+L+E                           +AISS            EVLA++GRDIVTKDISRLRGGWPMQDAFY
Sbjct:   57 VRISSVEALGQMVGLITRAQLKAALPRLVPTILELYKRDQDIAFLATCSLNNLLHASLLSESGPPLLDFEELTVILSTLLPVVCINNDNKEHSDFSVGLKTYNEVQRCFLTVGLVYPEDLFVFLINKCRLKEEPLTFGALCVLKHLLPRLSEAWHCKRHNLVEAVQFLLDDQDLGVRKVLSELIVVMASHCYLIGPSGELFVEYLVRHCALTDKDSNDLERSKD--ASGNPYIPFQYKRLEVKIGTLCPAELRAICEKGLLLLTITIPEMEHILWPFLLKMIIPQAYTGAVAMVCRCISELCRHRSNSNTMLAECKARADIPNPEELFVRLVVLLHDPLAREQLASQILTVLCYLAPLFPKNINLFWQDEIPKLKAYVSDTEDLKQDPSYQETWDDMIINFFAESLDVIQDSDWVIPFGNAITKQYGLYTSDDEHSALLHRCFGVFLQKVNDRAYVRDKIDWMYKQANITIPTNRLGLAKAMGLVAASHLDTVLEKLKGILDNVEQSIFRRFLSFFSDDFK-TEESDDIHAALALMYGYAAKYAPSTVIEARIDALVGTNMLSRLLHVRHPTAKQAVITAIDLLGRAVINAAENGSSFPLKRRDQMLDYILTLMGRDDSESFSDSSLELLDTQARALSACTTLVSVDPKLTIETRNHVLKATLGFFALPNDPIDVVNPLIDNLITLLCAILLTSGEDGRSRAEQLSHILRQIDQYVSSPMDYQRRRGCLAVHEMLLKFRTVCITAHCALGCQGSCTHNKKFDRNLHGNLSNLPSAFVLPSREALSLGDRVIMYLPRCADTNSEVRTVSAQILDQLFSISLSLPRPETSSYGVDIELSYSALSSLEDVIAILRSDASIDPSEVFNRIISSVCILLTKNELVATLHGCTSAICDKIKQSAEGAIQAVIEFVTRRGNELSEADVSRTTQALLMAANHVTEKHLRQETLAAISSLAESTSSKVVFNEVLATSGRDIVTKDISRLRGGWPMQDAFY 1044

HSP 2 Score: 412.149 bits (1058), Expect = 3.115e-119
Identity = 211/341 (61.88%), Postives = 251/341 (73.61%), Query Frame = 0
 
Query:  919 IPGISLILSKYLNRTLNVQREAAAAALSEFARYSEGLSSLLEEIVEALCRHVSDDSPTVRRLCLKGLVQMSSIHVNQYTTQVLGVILALLDDSNESVQLTAVSCLLMVLESSPNDAVEPILLSLSVRLRNLQVCMNMKIRAHAFAAFGTLSKYGIGELRDPFIEQVHAVFPRLVLHIHDEDRSVRQACQNTLKRVADLVGMEEMTVLFSTHRISSDHRTDYEDFLRDIAKQITQNLASRSSTYMASIVQ------------------------------------VFSVLVGQTSQSAHEIVRATCTSAIGLLLKASNPSSWRNARLDQLESSRNSHESDS 1223
            +  I +ILSK LNR    QREAAAAALSEF RYS+G  SLLE+IVE LCRHVSD+SPTVRRLCL+GLVQ+ SIH+ QYTTQVLGVILALLDDS+ESVQLTAVSCLL +LESSPNDAVEPILL+LSVRLRNLQ+CMN K+RA+AFAAFG LS YGIG   + F+EQVHA  PRLVLH+HD+D SVRQAC++TLKR+A L+ ME +  LF+ H  + DHRTDYEDF+RD+ KQ  Q+L SR  TYMAS +Q                                    VF  LVG+ S+S   +VRATC+SA+GLLLK S  SSW+ AR+D++ES R SH+S +
Sbjct: 1199 VQSICVILSKSLNRHQRYQREAAAAALSEFVRYSDGFGSLLEQIVEVLCRHVSDESPTVRRLCLRGLVQIPSIHMLQYTTQVLGVILALLDDSDESVQLTAVSCLLTMLESSPNDAVEPILLNLSVRLRNLQICMNPKMRANAFAAFGALSNYGIGAQHEAFLEQVHAAIPRLVLHLHDDDVSVRQACRSTLKRIAPLLEMEGLLPLFNMHCFNHDHRTDYEDFVRDLTKQFAQHLPSRVDTYMASTIQAFDAPWPIIQANAIYLSSCMLSLSDDQHILTLYYAQVFGTLVGKMSKSTDAVVRATCSSALGLLLKFSKSSSWKAARVDRVESGRRSHDSSA 1539
Match NameStatsDescription
A0A6P5FLH9E-Value: 7.895e-39, PID: 54.89(protein SHOOT GRAVITROPISM 6 isoform X2 {ECO:0000... [more]
F6HKD5E-Value: 1.412e-112, PID: 64.55PWWP domain-containing protein {ECO:0000259|PROSIT... [more]
A0A6J5VGC5E-Value: 8.182e-119, PID: 62.00Cnd1 domain-containing protein {ECO:0000259|Pfam:P... [more]
A0A2N9GPC2E-Value: 1.891e-28, PID: 64.31(Uncharacterized protein {ECO:0000313|EMBL:SPD0119... [more]
A0A7J6GYY5E-Value: 1.795e-104, PID: 61.39(Uncharacterized protein {ECO:0000313|EMBL:KAF4388... [more]
A0A7J6I6V0E-Value: 3.810e-104, PID: 61.39(Uncharacterized protein {ECO:0000313|EMBL:KAF4403... [more]
A0A5N6RFZ0E-Value: 8.217e-93, PID: 61.31(Uncharacterized protein {ECO:0000313|EMBL:KAE8098... [more]
A0A6A6KNJ3E-Value: 2.947e-117, PID: 61.69(Uncharacterized protein {ECO:0000313|EMBL:KAF2289... [more]
A0A6P5SY47E-Value: 1.215e-118, PID: 61.65(protein SHOOT GRAVITROPISM 6 isoform X1 {ECO:0000... [more]
A0A6P5T4A2E-Value: 3.115e-119, PID: 61.65(protein SHOOT GRAVITROPISM 6 isoform X2 {ECO:0000... [more]

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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
DCAR peptide blastp to SwissProt and TrEMBL without DCAR

This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions.
DCAR V1.0 Gene Prediction

For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins.

Data from this analysis can be viewed in JBrowse here.