Resource Type:
Polypeptide
Name:
DCAR_018658
Identifier:
DCAR_018658.mRNA-protein
Sequence:
MMMYPSAASSSSANSASVRVEKATSEFLNGPDWTLNIDICDAINLNHWLA
KDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDM
IKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVE
FPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLS
LSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQ
MLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTE
VPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAEEEEEEDEFAQLARRH
SKTQSATSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLA
LSTTDTPPPAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSY
VAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFS
SGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQ
QAQYQTHSQPQQPQYQTHSQPQQPQYQTHGQPQQPQFQTQRQPQQTQFQT
QGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPRQQVNTTAYRPMQGAGS
LQHVNSANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNG
DGRSKTNNTSPSLSGTTQSMGGGWK*
Sequence Length:
726
Sequence Checksum:
41e001bd8bd47dc6232427723b5dacf3
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_018658, derives from mRNA, DCAR_018658. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_018658 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_018658 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1AXI6 ((target of Myb protein 1-like {ECO:0000313|RefSeq:XP_021291594.1, ECO:0000313|RefSeq:XP_021291596.1}))
HSP 1 Score: 655.981 bits (1691), Expect = 0.000e+0
Identity = 407/753 (54.05%), Postives = 495/753 (65.74%), Query Frame = 0
Match: A0A6J1AXI6 ((target of Myb protein 1-like {ECO:0000313|RefSeq:XP_021291594.1, ECO:0000313|RefSeq:XP_021291596.1}))
HSP 1 Score: 655.981 bits (1691), Expect = 0.000e+0
Identity = 407/753 (54.05%), Postives = 495/753 (65.74%), Query Frame = 0
Query: 17 SVRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAP-STVVINAAAEEEEEEDEFAQLARRHSK--------------------TQSATSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTP----PPAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPR-QAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQTHSQPQQPQYQTHSQPQQPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPRQ-----------QVNTTAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSK-TNNTSPSLSGT-TQSMGGGWK 725
+V V+KATS+ L GPDWT+NIDICD++N NHW AKD+VKA+KKRLQHK+S V LLALTLLETMVKNCGD VH QI ERNIL +M+KIVKKK +M VR+KILVLLDSWQ+AFGG GG++PQYYWAY+ELRR GVEFP+R+ D++ IFTPP TH T+ H H GYGMPSNSS RLDE MA+EIE+LSLSS++SM++V++LLS MLQAV+P+DR+A+KDEVIVDLV RCRSN KKLMQMLTTT DEELL +GLELND +Q+ LAKHDAIA+G PLP QV + + E S+S K ++ K S +P +PSAP +TV N EEEEEED+FAQLARRHS+ +A + S AS + P NAL + DPP PV+TTKEQD+ID LS+ LSTT PP P S++ QNM Q PV P+ QG PYA QTY G+Q ++ + SYV PWAQPQP Q+ +Q PQ QPP +Q + R Q+Q+Q QS + + QT Q QS+ S QPQ+Q Q+QS P Q QP Q Q + Q Q Q + Q QP Q Q Q Q F Q Q Q QYSS YPPPPWAATPGY+ +P Q+N P+ G LQHVNS +NG+ + D +S G GQK F+P+YRLFEDLNVLGN DGR K T++TSPSLSGT +QSM GG K
Sbjct: 13 TVAVDKATSDLLIGPDWTMNIDICDSVNSNHWQAKDVVKAVKKRLQHKSSKVQLLALTLLETMVKNCGDYVHFQIAERNILGEMVKIVKKKADMVVRDKILVLLDSWQEAFGGPGGKHPQYYWAYDELRRSGVEFPKRSLDASPIFTPPATHPTMRHNHPGYGMPSNSSRRLDETMATEIESLSLSSLDSMRDVMELLSDMLQAVNPDDRVAVKDEVIVDLVNRCRSNQKKLMQMLTTTGDEELLVRGLELNDSLQSLLAKHDAIASGSPLPIQVTNASSKPAEA-STSNKSNEVKNSSLTPNISPSAPIATVTRNQIDEEEEEEDDFAQLARRHSRAQSTSSQSTSAGTSEGIVPINNTAPTTSYVPAASTSTP--CNALALPDPPAPVRTTKEQDLIDLLSITLSTTSASSPHTPPTP-SASYQNMHQVPVPPSTQGYPYASQTYPGSQRQLPYDSYVVPWAQPQPHPQKPSQ------PQIQPPYHSQQEVRPQSQHQIDQQSQSQTQFHTDSQT---QIQSNSLS----QAQPQFQTQSQS------LPRPQSQPLQLQASSQI-------QLQPQLQSQPQRQAQQQNQPHLQAQSQTQTQSFLQPQHQPQFQPQYPQYSSGYPPPPWAATPGYFNSPNHLSSANNMFSTPQMNVATSNPIIGNRPLQHVNSFPARGSNGAPMNGDSWASTGHRNPTPVAGQKPFIPSYRLFEDLNVLGNADGRLKMTSSTSPSLSGTSSQSMVGGRK 735
BLAST of DCAR_018658 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061EHP0 ((ENTH/VHS/GAT family protein {ECO:0000313|EMBL:EOY04530.1}))
HSP 1 Score: 629.017 bits (1621), Expect = 0.000e+0
Identity = 397/761 (52.17%), Postives = 477/761 (62.68%), Query Frame = 0
Match: A0A061EHP0 ((ENTH/VHS/GAT family protein {ECO:0000313|EMBL:EOY04530.1}))
HSP 1 Score: 629.017 bits (1621), Expect = 0.000e+0
Identity = 397/761 (52.17%), Postives = 477/761 (62.68%), Query Frame = 0
Query: 17 SVRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAP-STVVINAAAEEEEEEDEFAQLARRHSK--------------------TQSATSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTP----PPAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQTHSQPQQPQYQTHSQPQ--------------------QPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPRQQVNTTAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSK-TNNTSPSLSGT-TQSMGGGWK 725
+V V+KATS+ L GPDWT+NIDICD++N NHW AKD+VKA+KKRLQHK+S V LLALTLLETMVKNCGD VH QI ERNIL +M+KIVKKK +M VR+KILVLLDSWQ+AFGG GG++P YYWAY+ELRR GVEFP+R+ D+A IFTPP TH TV H H GYGMPSNSS RLDE MA+EIE+LSLSS++SM++V++LLS MLQAV+P+DR A+KDEVIVDLV RCRSN KKLMQMLTTT DEELLA+GLELND +Q+ LAKHDAIA+G PLP QV + + E S+S K ++ K S +P +PSAP +TV + EEEEEED+FAQLARRHS+ +A + S AS + P NAL + DPP PV+TTKEQD+ID LS+ LSTT PP P S++ QNM QAPV P+ QG PYA QTY G+Q ++ ++SYV PWAQPQP Q+ +Q PQ QP +Q Q Q Q S + T Q Q QS+ S QP +Q Q+QS P Q P Q Q + Q Q + QPQ+Q H QPQ PQ YSS YPPPPWAATPG RP LQHVNS +NG+ + D +S G GQK F+P+YRLFEDLNVLGN DGR K T++TSPSLSGT +QSM GG K
Sbjct: 13 TVAVDKATSDLLIGPDWTMNIDICDSVNSNHWQAKDVVKAVKKRLQHKSSKVQLLALTLLETMVKNCGDYVHFQIAERNILGEMVKIVKKKADMVVRDKILVLLDSWQEAFGGPGGKHPHYYWAYDELRRSGVEFPKRSLDAAPIFTPPATHPTVRHNHPGYGMPSNSSRRLDETMATEIESLSLSSLDSMRDVMELLSDMLQAVNPDDRAAVKDEVIVDLVNRCRSNQKKLMQMLTTTGDEELLARGLELNDSLQSLLAKHDAIASGSPLPIQVTNVSSKPAEA-STSNKSNEVKDSSLTPNISPSAPIATVTRSQIDEEEEEEDDFAQLARRHSRAQSTSSQSTSAGTSEGIVPINNTAPTTSYVPAASTSSPC--NALALPDPPAPVRTTKEQDLIDLLSITLSTTSASSPHTPPTP-SASYQNMHQAPVPPSTQGYPYASQTYPGSQRQLPYNSYVVPWAQPQPHPQKPSQ------PQVQPQYLSQQQVHPQSQHQIDQQSQSQSQFHTDS--QTQIQSNSLS----QAQPHFQTQSQS------LPRPQSHPLQLQAASQIQLQPQSQSQPQRQAQQQTQPRLQAQSQTQTQSFLQPQHQPHFQPQYPQ---------------------------YSSGYPPPPWAATPG-------------NRP------LQHVNSFPARGSNGAPMNGDSWASTGYKNPTPVAGQKPFIPSYRLFEDLNVLGNTDGRLKMTSSTSPSLSGTSSQSMVGGRK 705
BLAST of DCAR_018658 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U8E3W5 ((target of Myb protein 1-like {ECO:0000313|RefSeq:XP_016541942.1}))
HSP 1 Score: 624.394 bits (1609), Expect = 0.000e+0
Identity = 390/740 (52.70%), Postives = 452/740 (61.08%), Query Frame = 0
Match: A0A1U8E3W5 ((target of Myb protein 1-like {ECO:0000313|RefSeq:XP_016541942.1}))
HSP 1 Score: 624.394 bits (1609), Expect = 0.000e+0
Identity = 390/740 (52.70%), Postives = 452/740 (61.08%), Query Frame = 0
Query: 18 VRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAEE----EEEEDEFAQLARRHSKTQSA---------TSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTP-PPAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQTHSQPQQPQYQTHSQ-PQQPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPR-----------QQVNTTAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGTTQ-SMGGGWK 725
VRVEKATSEFL GPDWT+NIDICD IN N WLAKD VKA+KKRLQHKN V LL+LTLLETMVKNCGD H QI ER+ILQDM+KIVKKKT+M VR K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+ + D+A IFTPPVTH GYGMP NSSTRLDEAMA+E+ LSLSSINSM+++ DLL+ MLQAV P DR+A+KDEVIVDLV+RCRSN KKLMQMLTTT DEELLA+GLELND +Q LAKHDAIA+G PLP Q + E+ SLK + K S + A PSAP V+ A A + E+EED+FAQLARRHSKT A + S F A +P +NAL++ D P TKE D+ID LSL LS + P P +S TQN Q P++ QG+PYA QTY G Q + +F+SYVAPWA PQPQ Q H Q Q Q QPQ+Q P Q QFQ QPQ Q QS P Q + H+ Q PQ S+ +QP+ Q PQ Q P Q Q QY SAYPPPPWAATPGY +NP Q T A P+QG S+Q+ NS +NG I D + L P A GQKTF+P+YRLFEDLNV GNGD R +N+S LSGT SM GG K
Sbjct: 21 VRVEKATSEFLIGPDWTMNIDICDTINSNQWLAKDTVKAVKKRLQHKNPKVQLLSLTLLETMVKNCGDNAHFQIAERSILQDMVKIVKKKTDMHVRHKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKPSFDTAPIFTPPVTHPAPRQPQPGYGMPINSSTRLDEAMAAEVGNLSLSSINSMRDIADLLADMLQAVTPGDRLAVKDEVIVDLVDRCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQTVLAKHDAIASGSPLPTQFPNDNISAREMNDPSLKPAEVKSPSPTADAKPSAP---VLPATAGQIDEEEDEEDDFAQLARRHSKTSPAALTHEGMVPANTSNFT-AEPMDPVTNNALILHDSPATSTPTKELDIIDLLSLTLSPSVYPETPQNSASATQNTHQEPLASTTQGNPYASQTYLGYQDQ-SFNSYVAPWAHPQPQ-----QFHPQ---------------YQHQGQPQLQHP-----------TQVQFQP----------QPQSQIHHQSRPQPSNQPQPQQPQESPLQSQHTSQQLPQSPLQSELNEQPRTQLELHPQSQQL----------------PPHAQTQFLQY-SAYPPPPWAATPGYLSNPSPSARPTFMYSTPQATTNASVPLQGPRSIQNFNSFPTMGSNGVAINGDTRVPLHPKTTTPASGQKTFIPSYRLFEDLNVFGNGDQR---HNSSSGLSGTNSPSMVGGRK 694
BLAST of DCAR_018658 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6IRI4 ((Uncharacterized protein {ECO:0000313|EMBL:OIS97760.1}))
HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0
Identity = 396/736 (53.80%), Postives = 478/736 (64.95%), Query Frame = 0
Match: A0A1J6IRI4 ((Uncharacterized protein {ECO:0000313|EMBL:OIS97760.1}))
HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0
Identity = 396/736 (53.80%), Postives = 478/736 (64.95%), Query Frame = 0
Query: 18 VRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAE---EEEEEDEFAQLARRHSKTQSA--------TSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPP-PAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQTHSQPQQPQYQTHSQPQQPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPRQQV----------NTTAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGT-TQSMGGGWK 725
VRVEKATSEFL GPDWT+NIDICD IN NHWLAKD+VKA+KKRLQHKN V LL+LTLLETMVKNCGD VH QI ER+ILQDM+KIVKKKT+M VR+K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+R+ DSA IFTPPVTH GYGMPSNSSTRLDEAMA+E+E LSLSSINSM+EV DLL+ MLQAV P DR+A++DEVIVDLV++CRSN KKLMQMLTTT DEELLA+GLELND +Q LAKHDAIA+G PLP +V + E+ SLK + K + + A PSAP V+ A + EE+EED+FAQLARRHSKT A ++ ++ + +P SNAL++ DPP TKEQD+ID LSL LS++ P P +S + Q PV+ QG+PYA Q Y G Q + +F+SYVAPWAQ QPQ Q Q+Q Q PQ Q +Q Q QP QY Q Q+P + Q Q Q P +P QPQY PQ++ Q+ Q+ + PQ P QT QQP+ Q + PQ Q P + Q Q QY SAYPPPPWA+TPGY++NP NT+ P+QG +Q+VNS +NG I D Q P +S GQK F+P+YRLFEDL+V GNGD R +N+S +SGT +QSM GG K
Sbjct: 30 VRVEKATSEFLIGPDWTINIDICDTINSNHWLAKDVVKAVKKRLQHKNPKVQLLSLTLLETMVKNCGDNVHFQIAERSILQDMVKIVKKKTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDSAPIFTPPVTHPAPRQPQPGYGMPSNSSTRLDEAMAAEMENLSLSSINSMKEVADLLADMLQAVTPGDRLAVQDEVIVDLVDQCRSNQKKLMQMLTTTRDEELLAQGLELNDNLQMVLAKHDAIASGSPLPTEVPNNNILAREMHDPSLKPAEVKPPTPAADAKPSAP--VLAPTAGQIDEEEDEEDDFAQLARRHSKTSPAAQTSEGMVSANNSNSTGESLDPVTSNALILRDPPPTAMPTKEQDIIDLLSLTLSSSIYPETPQNSASANHSTHQEPVASTTQGNPYASQAYLGYQDQ-SFNSYVAPWAQAQPQPQPQSQSQPQFRPQFQSAAQPQSQP---QYHHQFQTPTQAQFQAQPQPQAQPLHQPQSQP-HPRPQPQY-------------------PQESSLQS-------QHTSQQLPQSP-LQTELN-QQPRTQLELHPQPQQL-----PPRAQTQFPQY-SAYPPPPWASTPGYFSNPNHSTRPSYMYSTPQNTSM--PLQGPRPVQNVNSIPTMGSNGVAINGDAQIRPSPKTTSSTAGQKPFIPSYRLFEDLSVFGNGDQR---HNSSSGVSGTNSQSMVGGRK 719
BLAST of DCAR_018658 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6N2B547 ((Uncharacterized protein {ECO:0000313|EMBL:TMW89004.1}))
HSP 1 Score: 617.461 bits (1591), Expect = 0.000e+0
Identity = 406/740 (54.86%), Postives = 482/740 (65.14%), Query Frame = 0
Match: A0A6N2B547 ((Uncharacterized protein {ECO:0000313|EMBL:TMW89004.1}))
HSP 1 Score: 617.461 bits (1591), Expect = 0.000e+0
Identity = 406/740 (54.86%), Postives = 482/740 (65.14%), Query Frame = 0
Query: 16 ASVRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAE---EEEEEDEFAQLARRHSKTQSA--TSQSTF-AGASET-----EPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPPPAPDS-STTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSP-QFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQT-HSQPQQPQYQTHSQPQQPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSS--QYSSAYPPPPWAATPGYYTNPRQ---------QVNTTAYRPMQGAGSLQHVNS--ANGSN-IARDGQSSLGPTGNAS-AGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGT-TQSMGGGWK 725
A+VRVEKATSEFL GPDWT+NIDICD IN N WLAKD+VKA+KKRLQHKN V LLALTL+ETMVKNCGD VH QI ER ILQDM+KIVKKKT+M VR+K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+R+ D+A IFTPPVTH A GYGMP+NSSTRLDEAMA+++ LSLSSINSM++V DLL+ MLQAV P DR+A+KDEVIVDLV+RCRSN KKLMQMLTTT DEELLA+GLELND +Q LAKHDAIA+G PLP QV + E+ SLK + K S PSAP V++ A + EE+EED+FAQLARRHSKT A TS+ T A AS + +P SNAL++ DP P +TKEQD+ID LSL LS++ P + +S S TQN Q P++ G+PYA Q Y G Q + +F+SYVAPWAQPQPQ Q Q H P Q QGQP Q+ PQ Q P Q Q Q QS P QP Q Q Q QPQ++ Q+ H+ Q PQ P QP+ QQP+ Q + P Q +P P+ Q+ QY SAYPPPPWAATPGY +NP Q T +Q +Q+VNS GSN IA +G + + P + A GQKTF+P+YRLFEDLNV GN D R +N+S LSGT +QSM GG K
Sbjct: 19 AAVRVEKATSEFLIGPDWTMNIDICDTINSNQWLAKDVVKAVKKRLQHKNPKVQLLALTLMETMVKNCGDNVHFQITERTILQDMVKIVKKKTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDTAPIFTPPVTHPAPRQAQPGYGMPNNSSTRLDEAMAADVGNLSLSSINSMRDVADLLADMLQAVTPGDRLAVKDEVIVDLVDRCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQTVLAKHDAIASGSPLPTQVPNDNFSAREMHDPSLKPVEVKPPSPIADVKPSAP--VLVATAGQIDEEEDEEDDFAQLARRHSKTCPAAQTSEGTVSANASNSMGEPLDPVASNALILRDP--PATSTKEQDIIDLLSLTLSSSVYPETSQNSASATQNTHQEPLASTTHGNPYASQAYIGYQDQ-SFNSYVAPWAQPQPQHQSPPQFH--------PQYQHQGQP---QFHPQFQHPTQAQVQSQPQPHPQQQPQSQLHHQSRP--QPSTQPQRQ-------------QPQESSLQSQHTSQQLPQ-----SPVQPELN-----QQPRTQQELHP-------QSQPLSPRTQTQFLQY-SAYPPPPWAATPGYLSNPTSRPAYMYSTPQAATNTPMSLQATRPIQNVNSFPNMGSNGIAINGDTQVHPHPKTTPASGQKTFIPSYRLFEDLNVFGNSDQR---HNSSSGLSGTNSQSMVGGRK 706
BLAST of DCAR_018658 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4ADR9 ((target of Myb protein 1-like isoform X1 {ECO:0000313|RefSeq:XP_016474832.1}))
HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 395/738 (53.52%), Postives = 475/738 (64.36%), Query Frame = 0
Match: A0A1S4ADR9 ((target of Myb protein 1-like isoform X1 {ECO:0000313|RefSeq:XP_016474832.1}))
HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 395/738 (53.52%), Postives = 475/738 (64.36%), Query Frame = 0
Query: 18 VRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAE---EEEEEDEFAQLARRHSKTQSA--------TSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPP-PAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQT-HSQPQQPQYQTHSQPQQPQYQTHGQPQQP--QFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPRQQV----------NTTAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGTTQSMGGGWK 725
VRVEKATSEFL GPDWT+NIDICD IN NHWLAKD+ KA+KKRLQHKN V LLALTLLETMVKNCGD VH QI ER+ILQDM+KIVKKKT+M VR+K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+R+ D+A IFTPPVTH GYGMPSNSSTRLDEAMA+E+ LSLSSINSM+EV DLL+ MLQAV P DR+A++DEVIVDLV++CRSN KKLMQMLTTT DEELLA+GLELND +Q LAKHDAIA+G PLP +V + E+ SLK + K + + A PSAP V+ A + EE+EED+FAQLARRHSKT A ++ ++ + +P SNAL++ DPP TKEQD+ID LSL LS++ P P +S + Q PV+ QG+PYA Q Y G Q + +F+SYVAPWAQ QPQ Q Q+Q Q PQ Q +Q Q QP QY Q Q+P + Q Q Q P +P QPQY PQ++ Q+ H+ Q PQ P QP+ QQP Q + QPQQ P + Q Q QY SAYPPPPWA+TPGY++NP NT+ P+QG +Q+VNS +NG I D Q P +SA GQK F+P+YRLFEDLNV GNGD R N++S ++QSM GG K
Sbjct: 22 VRVEKATSEFLIGPDWTINIDICDTINSNHWLAKDVAKAVKKRLQHKNPKVQLLALTLLETMVKNCGDNVHFQIAERSILQDMVKIVKKKTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDTAPIFTPPVTHPAPRQPQPGYGMPSNSSTRLDEAMAAEMANLSLSSINSMKEVADLLADMLQAVIPGDRLAVQDEVIVDLVDQCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQMVLAKHDAIASGSPLPTEVPNNNISAREMHDPSLKPAEVKPPTPAADAKPSAP--VLAPTAGQIDEEEDEEDDFAQLARRHSKTSPAAQTSEGMVSANNSNSTGESLDPVTSNALILRDPPPTAMPTKEQDIIDLLSLTLSSSIYPETPQNSASANHSTHQEPVASTTQGNPYASQAYLGYQDQ-SFNSYVAPWAQAQPQPQPQSQSQPQFRPQFQSAAQPQSQP---QYHHQFQTPTQAQFQAQAQPQAQSLHQPQSQP-HPRPQPQY-------------------PQESSLQSQHTSQQLPQ-----SPLQPELN-----QQPRTQLELHSQPQQL-------PPRAQTQFPQY-SAYPPPPWASTPGYFSNPNHSTRPSYMYSTPQNTSM--PLQGPRPVQNVNSIPTMGSNGVAINGDAQIRSSPKTTSSAAGQKPFIPSYRLFEDLNVFGNGDQRH--NSSSGVSGTSSQSMVGGRK 711
BLAST of DCAR_018658 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4AEE4 ((target of Myb protein 1-like isoform X2 {ECO:0000313|RefSeq:XP_016474833.1}))
HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 395/738 (53.52%), Postives = 475/738 (64.36%), Query Frame = 0
Match: A0A1S4AEE4 ((target of Myb protein 1-like isoform X2 {ECO:0000313|RefSeq:XP_016474833.1}))
HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0
Identity = 395/738 (53.52%), Postives = 475/738 (64.36%), Query Frame = 0
Query: 18 VRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAE---EEEEEDEFAQLARRHSKTQSA--------TSQSTFAGASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPP-PAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQT-HSQPQQPQYQTHSQPQQPQYQTHGQPQQP--QFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTNPRQQV----------NTTAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGTTQSMGGGWK 725
VRVEKATSEFL GPDWT+NIDICD IN NHWLAKD+ KA+KKRLQHKN V LLALTLLETMVKNCGD VH QI ER+ILQDM+KIVKKKT+M VR+K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+R+ D+A IFTPPVTH GYGMPSNSSTRLDEAMA+E+ LSLSSINSM+EV DLL+ MLQAV P DR+A++DEVIVDLV++CRSN KKLMQMLTTT DEELLA+GLELND +Q LAKHDAIA+G PLP +V + E+ SLK + K + + A PSAP V+ A + EE+EED+FAQLARRHSKT A ++ ++ + +P SNAL++ DPP TKEQD+ID LSL LS++ P P +S + Q PV+ QG+PYA Q Y G Q + +F+SYVAPWAQ QPQ Q Q+Q Q PQ Q +Q Q QP QY Q Q+P + Q Q Q P +P QPQY PQ++ Q+ H+ Q PQ P QP+ QQP Q + QPQQ P + Q Q QY SAYPPPPWA+TPGY++NP NT+ P+QG +Q+VNS +NG I D Q P +SA GQK F+P+YRLFEDLNV GNGD R N++S ++QSM GG K
Sbjct: 16 VRVEKATSEFLIGPDWTINIDICDTINSNHWLAKDVAKAVKKRLQHKNPKVQLLALTLLETMVKNCGDNVHFQIAERSILQDMVKIVKKKTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDTAPIFTPPVTHPAPRQPQPGYGMPSNSSTRLDEAMAAEMANLSLSSINSMKEVADLLADMLQAVIPGDRLAVQDEVIVDLVDQCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQMVLAKHDAIASGSPLPTEVPNNNISAREMHDPSLKPAEVKPPTPAADAKPSAP--VLAPTAGQIDEEEDEEDDFAQLARRHSKTSPAAQTSEGMVSANNSNSTGESLDPVTSNALILRDPPPTAMPTKEQDIIDLLSLTLSSSIYPETPQNSASANHSTHQEPVASTTQGNPYASQAYLGYQDQ-SFNSYVAPWAQAQPQPQPQSQSQPQFRPQFQSAAQPQSQP---QYHHQFQTPTQAQFQAQAQPQAQSLHQPQSQP-HPRPQPQY-------------------PQESSLQSQHTSQQLPQ-----SPLQPELN-----QQPRTQLELHSQPQQL-------PPRAQTQFPQY-SAYPPPPWASTPGYFSNPNHSTRPSYMYSTPQNTSM--PLQGPRPVQNVNSIPTMGSNGVAINGDAQIRSSPKTTSSAAGQKPFIPSYRLFEDLNVFGNGDQRH--NSSSGVSGTSSQSMVGGRK 705
BLAST of DCAR_018658 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HJJ3 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5952401.1}))
HSP 1 Score: 600.127 bits (1546), Expect = 0.000e+0
Identity = 309/449 (68.82%), Postives = 355/449 (79.06%), Query Frame = 0
HSP 2 Score: 80.4925 bits (197), Expect = 4.756e-13
Identity = 68/131 (51.91%), Postives = 83/131 (63.36%), Query Frame = 0
Match: A0A7J7HJJ3 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5952401.1}))
HSP 1 Score: 600.127 bits (1546), Expect = 0.000e+0
Identity = 309/449 (68.82%), Postives = 355/449 (79.06%), Query Frame = 0
Query: 16 ASVRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAEEEEEEDEFAQLARRHSKTQSATSQSTFAGASETEPSL-------SNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPPPAPDS--STTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWA 455
A+VRVEKATS+ L GPDWT+N+DICD+IN NHW AKD+VKALKKRLQHKN VHLLALTLLETMVKNCGD VHSQIVERNILQ+MIKIVKKKT+M VR+KILVLLDSWQ+AFGG GG+ PQYYWAY+ELRR GV FPQR+ D+A IFTPPV HST+ HA AGYGMPSNSSTRLDEAMA+E+E LSLSSINSM+ VLDLL+ MLQAV+PNDR ++KDEVIVDLV RCRSN KKLMQMLTTT DEELL +GLELND +Q ELAKHDAIA+G PLP QV + PQ SSLK + K+ S +P S P A EEE+EED+FAQLARRHS+T+S TSQ T G +E+ S+ SNAL + DPP PV+TTKEQDMID LS+ LSTT P P + S++QN+Q PVSP QG PYA Q Y GN G+V ++SYV PWA
Sbjct: 13 ATVRVEKATSDLLIGPDWTMNMDICDSINSNHWEAKDVVKALKKRLQHKNPKVHLLALTLLETMVKNCGDYVHSQIVERNILQEMIKIVKKKTDMHVRDKILVLLDSWQEAFGGPGGKCPQYYWAYDELRRSGVVFPQRSFDTAPIFTPPVAHSTLRHAQAGYGMPSNSSTRLDEAMAAEMENLSLSSINSMRNVLDLLADMLQAVNPNDRASVKDEVIVDLVTRCRSNQKKLMQMLTTTGDEELLGQGLELNDSLQTELAKHDAIASGSPLPTQVTNLSPQSVPAHDSSLKPTEHKQPSQTPNVNRSPP------AVEEEEDEEDDFAQLARRHSRTRSTTSQDT-TGTNESVTSVNATNNIPSNALALPDPPAPVRTTKEQDMIDLLSITLSTTTPSPQTPHTPASSSQNIQHTPVSPTTQGYPYASQAYLGNVGQVPYNSYVVPWA 454
HSP 2 Score: 80.4925 bits (197), Expect = 4.756e-13
Identity = 68/131 (51.91%), Postives = 83/131 (63.36%), Query Frame = 0
Query: 615 SSAYPPPPWAATPGYYTN-----------PRQQVNT-TAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNA-SAGGQKTFVPTYRLFEDLNVLGNGDGRSK-TNNTSPSLSGT-TQSMGGGWK 725
SSAYPPPPWA TPGY++N Q+ N ++Y MQG L+ NS +NG+ + + + S PT A +A QK FVP+YRLFEDLNVLGN DGR K T+NTSPSLSGT +QSM GG K
Sbjct: 520 SSAYPPPPWAPTPGYFSNQNQFSTRPYALATQRANAPSSYTSMQGGRPLEQFNSFNARGSNGTPMNGELRVSPSPTITAPAAAVQKPFVPSYRLFEDLNVLGNADGRFKMTSNTSPSLSGTSSQSMVGGRK 650
BLAST of DCAR_018658 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VVC5 ((target of Myb protein 1-like {ECO:0000313|RefSeq:XP_009766354.1}))
HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0
Identity = 388/735 (52.79%), Postives = 467/735 (63.54%), Query Frame = 0
Match: A0A1U7VVC5 ((target of Myb protein 1-like {ECO:0000313|RefSeq:XP_009766354.1}))
HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0
Identity = 388/735 (52.79%), Postives = 467/735 (63.54%), Query Frame = 0
Query: 18 VRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAE---EEEEEDEFAQLARRHSKTQSA--TSQSTFAG------ASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPP-PAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQTHSQPQQP-QYQTHSQPQQPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTN------PRQQVNT--TAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGT-TQSMGGGWK 725
VRVEKATSEFL GPDWT+NIDICD IN NHWLAKD+VKA+KKRLQHKN V LL+LTLLETMVKNCGD VH QI ER+ILQDM+KIVKKKT+M VR+K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+R+ D+A IFTPPVTH GYGMPSNSSTRLDEAMA+++E LSLSSINSM+EV DLL+ MLQAV P DR+A++DEVIVDLV +CRSN KKLMQMLTTT DEELLA+GLELND +Q LAKHDAIA+G PLP +V + E+ SLK + + + + A PSAP V+ A + EE+EED+FAQLARRHSKT A TS+ + +P SNAL++ DPP TKEQD+ID LSL LS++ P P +S + Q PV+ QG+PYA Q Y G Q + +F+SYVAPWAQ QPQ Q Q+Q Q Q QY Q Q+P + Q Q L QP + Q Q PQ S Q+Q+ + PQ P Q + + QP+ Q + H QPQQ P + Q Q QY SAYPPPPWA+TPGY++N P +T P+QG +Q+VNS +NG I D Q P +S GQK F+P+YRLFEDLNV GNGD R +N+S +SGT +QSM GG K
Sbjct: 32 VRVEKATSEFLIGPDWTINIDICDTINSNHWLAKDVVKAVKKRLQHKNPKVQLLSLTLLETMVKNCGDNVHFQIAERSILQDMVKIVKKKTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDTAPIFTPPVTHPAPRQPQPGYGMPSNSSTRLDEAMAADMENLSLSSINSMKEVADLLADMLQAVTPGDRLAVQDEVIVDLVYQCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQMVLAKHDAIASGSPLPTEVPNNNISAREMHDPSLKPAEVEPPTPAADAKPSAP--VLAPTAGQIDEEEDEEDDFAQLARRHSKTSPAAQTSEGMVSAYNSNSTGESLDPVTSNALILRDPPPTAMPTKEQDIIDLLSLTLSSSIYPETPQNSASANHSTHQEPVASTTQGNPYASQAYLGYQDQ-SFNSYVAPWAQTQPQPQPQSQSQPQ---FPPQFQPQSQPQSQPQYHHQFQTPTQAQFQTQAQAQPQAQP---------LHQPHPRPQPQYPQES---------SLQSQHTSQQLPQCPLQTELNQQPRT-QLELHPQPQQ------------------LPPRAQTQFPQY-SAYPPPPWASTPGYFSNLNHSTRPSYMYSTPQNTSMPLQGPRPVQNVNSIPTMGSNGVAINGDAQIRPSPKTTSSTAGQKPFIPSYRLFEDLNVFGNGDQR---HNSSSGVSGTNSQSMVGGRK 719
BLAST of DCAR_018658 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3ZYU9 ((target of Myb protein 1-like isoform X1 {ECO:0000313|RefSeq:XP_016469481.1}))
HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0
Identity = 388/735 (52.79%), Postives = 467/735 (63.54%), Query Frame = 0
Match: A0A1S3ZYU9 ((target of Myb protein 1-like isoform X1 {ECO:0000313|RefSeq:XP_016469481.1}))
HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0
Identity = 388/735 (52.79%), Postives = 467/735 (63.54%), Query Frame = 0
Query: 18 VRVEKATSEFLNGPDWTLNIDICDAINLNHWLAKDIVKALKKRLQHKNSHVHLLALTLLETMVKNCGDPVHSQIVERNILQDMIKIVKKKTNMSVREKILVLLDSWQQAFGGAGGRYPQYYWAYEELRRGGVEFPQRASDSALIFTPPVTHSTVGHAHAGYGMPSNSSTRLDEAMASEIETLSLSSINSMQEVLDLLSAMLQAVDPNDRMAIKDEVIVDLVERCRSNHKKLMQMLTTTSDEELLAKGLELNDCIQNELAKHDAIAAGLPLPAQVMSPKPQLTEVPSSSLKVDDGKKFSSSPPAAPSAPSTVVINAAAE---EEEEEDEFAQLARRHSKTQSA--TSQSTFAG------ASETEPSLSNALVVSDPPVPVKTTKEQDMIDFLSLALSTTDTPP-PAPDSSTTQNMQQAPVSPNGQGSPYAPQTYTGNQGKVAFSSYVAPWAQPQPQIQQQAQLHQQPLPQQQPPSQAQGQPRQAQYQPQVQSPQFSSGYPTGQTQQPQFQSSQFSPGYPLGQPQYQAQAQSPQFSPGYPPGQGQPQQAQYQTHSQPQQP-QYQTHSQPQQPQYQTHGQPQQPQFQTQRQPQQTQFQTQGKPQQPQAQSSQYSSAYPPPPWAATPGYYTN------PRQQVNT--TAYRPMQGAGSLQHVNS-----ANGSNIARDGQSSLGPTGNASAGGQKTFVPTYRLFEDLNVLGNGDGRSKTNNTSPSLSGT-TQSMGGGWK 725
VRVEKATSEFL GPDWT+NIDICD IN NHWLAKD+VKA+KKRLQHKN V LL+LTLLETMVKNCGD VH QI ER+ILQDM+KIVKKKT+M VR+K+LVLLDSWQ+AFGG GG+YPQYYWAYEELRR GVEFP+R+ D+A IFTPPVTH GYGMPSNSSTRLDEAMA+++E LSLSSINSM+EV DLL+ MLQAV P DR+A++DEVIVDLV +CRSN KKLMQMLTTT DEELLA+GLELND +Q LAKHDAIA+G PLP +V + E+ SLK + + + + A PSAP V+ A + EE+EED+FAQLARRHSKT A TS+ + +P SNAL++ DPP TKEQD+ID LSL LS++ P P +S + Q PV+ QG+PYA Q Y G Q + +F+SYVAPWAQ QPQ Q Q+Q Q Q QY Q Q+P + Q Q L QP + Q Q PQ S Q+Q+ + PQ P Q + + QP+ Q + H QPQQ P + Q Q QY SAYPPPPWA+TPGY++N P +T P+QG +Q+VNS +NG I D Q P +S GQK F+P+YRLFEDLNV GNGD R +N+S +SGT +QSM GG K
Sbjct: 32 VRVEKATSEFLIGPDWTINIDICDTINSNHWLAKDVVKAVKKRLQHKNPKVQLLSLTLLETMVKNCGDNVHFQIAERSILQDMVKIVKKKTDMHVRDKVLVLLDSWQEAFGGPGGKYPQYYWAYEELRRAGVEFPKRSFDTAPIFTPPVTHPAPRQPQPGYGMPSNSSTRLDEAMAADMENLSLSSINSMKEVADLLADMLQAVTPGDRLAVQDEVIVDLVYQCRSNQKKLMQMLTTTGDEELLAQGLELNDNLQMVLAKHDAIASGSPLPTEVPNNNISAREMHDPSLKPAEVEPPTPAADAKPSAP--VLAPTAGQIDEEEDEEDDFAQLARRHSKTSPAAQTSEGMVSAYNSNSTGESLDPVTSNALILRDPPPTAMPTKEQDIIDLLSLTLSSSIYPETPQNSASANHSTHQEPVASTTQGNPYASQAYLGYQDQ-SFNSYVAPWAQTQPQPQPQSQSQPQ---FPPQFQPQSQPQSQPQYHHQFQTPTQAQFQTQAQAQPQAQP---------LHQPHPRPQPQYPQES---------SLQSQHTSQQLPQCPLQTELNQQPRT-QLELHPQPQQ------------------LPPRAQTQFPQY-SAYPPPPWASTPGYFSNLNHSTRPSYMYSTPQNTSMPLQGPRPVQNVNSIPTMGSNGVAINGDAQIRPSPKTTSSTAGQKPFIPSYRLFEDLNVFGNGDQR---HNSSSGVSGTNSQSMVGGRK 719
| Match Name | Stats | Description |
|---|---|---|
| A0A6J1AXI6 | E-Value: 0.000e+0, PID: 54.05 | (target of Myb protein 1-like {ECO:0000313|RefSeq:... [more] |
| A0A061EHP0 | E-Value: 0.000e+0, PID: 52.17 | (ENTH/VHS/GAT family protein {ECO:0000313|EMBL:EOY... [more] |
| A0A1U8E3W5 | E-Value: 0.000e+0, PID: 52.70 | (target of Myb protein 1-like {ECO:0000313|RefSeq:... [more] |
| A0A1J6IRI4 | E-Value: 0.000e+0, PID: 53.80 | (Uncharacterized protein {ECO:0000313|EMBL:OIS9776... [more] |
| A0A6N2B547 | E-Value: 0.000e+0, PID: 54.86 | (Uncharacterized protein {ECO:0000313|EMBL:TMW8900... [more] |
| A0A1S4ADR9 | E-Value: 0.000e+0, PID: 53.52 | (target of Myb protein 1-like isoform X1 {ECO:0000... [more] |
| A0A1S4AEE4 | E-Value: 0.000e+0, PID: 53.52 | (target of Myb protein 1-like isoform X2 {ECO:0000... [more] |
| A0A7J7HJJ3 | E-Value: 4.756e-13, PID: 68.82 | (Uncharacterized protein {ECO:0000313|EMBL:KAF5952... [more] |
| A0A1U7VVC5 | E-Value: 0.000e+0, PID: 52.79 | (target of Myb protein 1-like {ECO:0000313|RefSeq:... [more] |
| A0A1S3ZYU9 | E-Value: 0.000e+0, PID: 52.79 | (target of Myb protein 1-like isoform X1 {ECO:0000... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |