Resource Type:
Polypeptide
Name:
DCAR_018795
Identifier:
DCAR_018795.mRNA-protein
Sequence:
MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGES
ETGRSLKTKVLLRVFSEDYERVKKKILDPRGVKDNLCIDIGTTLEVILTI
VRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDF
WIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIF
PLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEAC
WRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFG
IYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAI
IIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQE
LRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPL
FDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTT
NGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVE
AFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRY
KKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTR
MGVNVHPGSSPVNSLQKPEEPDFSVDEE*
Sequence Length:
679
Sequence Checksum:
cc30ca8c5f12c1206dff8c802a0145e4
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_018795, derives from mRNA, DCAR_018795. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_018795 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_018795 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EZM9 (Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042})
HSP 1 Score: 1110.52 bits (2871), Expect = 0.000e+0
Identity = 542/711 (76.23%), Postives = 598/711 (84.11%), Query Frame = 0
Match: A0A4S4EZM9 (Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042})
HSP 1 Score: 1110.52 bits (2871), Expect = 0.000e+0
Identity = 542/711 (76.23%), Postives = 598/711 (84.11%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESET---GRSLKTKVLLRVFSEDYERVKKKILDPRG-----------------------------VKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTRMGVN--VHPGSSPVNSLQKPEEPDFSVDE 677
MAYGNSRSVRFQDD LP +N D+V+KVKYKIDG+Q ++SSS+ E ET GRSLK KVL RVFSEDYERVK+KILDPRG V+D++CIDIG TLEV+LTI+RSI DVFYMIQI+VRFRTAYVAPSSRVFGRGELVI++SKIA +YL K FWID IAA+P+PQ+LIWI+IPSL GSTMANTKNVLRF + QYLPRLF+IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHVLGACWYLL++ER E+CW+ VC++D C+ D+FDC KV D R W SSN+T +C N DSY+FGIYGDA S VT++ FFNKYFYCLWWGLKNLSSLGQ L+T+TYVGEISFAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWM HRQLP ELRQSVRKYDQYKWVAT GVDEETLL+GLP+DLRRDIKRHLC DLVRRVPLFDQMDE+MLDAICERLKPALCT+GT LVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRPSV PSSTRTVKA+SEVEAFAL+AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACF+QAAWRRYKKRK AELKAKE P ++ L D +VP PGSGFA+YAA+L ASTR G N SS V+SLQKP EPDFSV+E
Sbjct: 1 MAYGNSRSVRFQDDLELEKLPTINRDSVVKVKYKIDGTQISESSSRNSEKETEMTGRSLKAKVLSRVFSEDYERVKRKILDPRGPTIQRWNKIFLVACLVSLFVDPLFFYLPEVRDDICIDIGYTLEVVLTIIRSIADVFYMIQIYVRFRTAYVAPSSRVFGRGELVIDTSKIAARYLRKSFWIDAIAAVPVPQLLIWIIIPSLGGSTMANTKNVLRFFLFLQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLSIERQESCWKKVCHVDNQSCQSDFFDCHKVEDPNRKAWLLSSNVTNLCDPNNDSYSFGIYGDATISHVTSTKFFNKYFYCLWWGLKNLSSLGQNLSTSTYVGEISFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMRHRQLPPELRQSVRKYDQYKWVATHGVDEETLLKGLPMDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALCTQGTSLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVTFPSSTRTVKALSEVEAFALLAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRYKKRKSVAELKAKECPVVGESELLIGQLDMDVPPPGSGFAVYAARLAASTRRGGNKVSGSDSSVVSSLQKPAEPDFSVEE 711
BLAST of DCAR_018795 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BQS2 (Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042})
HSP 1 Score: 1105.12 bits (2857), Expect = 0.000e+0
Identity = 544/715 (76.08%), Postives = 604/715 (84.48%), Query Frame = 0
Match: A0A5J5BQS2 (Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042})
HSP 1 Score: 1105.12 bits (2857), Expect = 0.000e+0
Identity = 544/715 (76.08%), Postives = 604/715 (84.48%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESET---GRSLKTKVLLRVFSEDYERVKKKILDPRG-----------------------------VKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCS---KVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTRMGVNVH--PGSSPVNSLQKPEEPDFSVDEE 678
MAYGNSRSVRFQ+D A L +NGD++IKVKYKIDG+Q +SSS++GE ET G+SLK KVL RVFSEDYERVKKKILDPRG V+ N CI IG TLEV+LTI+RSI DVFYMIQI+VRFRTAYVAPSSRVFGRGELVI+SSKIA +YL + FWID IAALPLPQ+LIW++IP+L+GSTM NTKNVLRFI+IFQYLPRLF+IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHVLGACWYLL++ER EACWR C+++++ C++ +FDC +V DS R WF+SSN+T +C N SY FGIYGDALT +VT+S FFNKYFYCLWWGLKNLSSLGQ L T+T VGEI FAIIIA +GLVLFA LIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLP EL+QSVRKYDQYKW+ATRGVDEE LL+GLPLDLRRDIKRHLC DLVRRV LFDQMDE+MLDAICERLKPALCT+GT LVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRP+VILPSSTRTVKAISEVEAFALMAEDL FVASQFRRLHSKQLRHKFR +SHQWRTWAACF+QAAWRR+KKRK AELKA+ENP AA+ + D NVP PGSG A+YAA+L ASTR GVN H SS +SLQKPEEPDFSV++E
Sbjct: 1 MAYGNSRSVRFQNDLELAKLSTINGDSMIKVKYKIDGTQIPESSSRKGEMETDMIGKSLKAKVLSRVFSEDYERVKKKILDPRGQTIHRWNKILLVACLVSLFVDPLFFYLPVVRGNFCIYIGITLEVVLTIIRSIADVFYMIQIYVRFRTAYVAPSSRVFGRGELVIDSSKIALRYLRRGFWIDAIAALPLPQILIWVIIPNLNGSTMMNTKNVLRFILIFQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWRHACSLEKTSCQYSFFDCHGVVEVEDSNRTIWFRSSNVTYLCDPNNSSYPFGIYGDALTYNVTSSKFFNKYFYCLWWGLKNLSSLGQSLATSTNVGEICFAIIIATLGLVLFAQLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPLELKQSVRKYDQYKWLATRGVDEEALLKGLPLDLRRDIKRHLCLDLVRRVQLFDQMDERMLDAICERLKPALCTQGTSLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPNVILPSSTRTVKAISEVEAFALMAEDLTFVASQFRRLHSKQLRHKFRSYSHQWRTWAACFIQAAWRRFKKRKSAAELKARENPTAAEDELAQEQMDINVPPPGSGRAMYAARLAASTR-GVNKHSVSDSSIASSLQKPEEPDFSVEQE 714
BLAST of DCAR_018795 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9TZ15 ((protein CNGC15b isoform X2 {ECO:0000313|RefSeq:XP_011089272.1}))
HSP 1 Score: 1103.58 bits (2853), Expect = 0.000e+0
Identity = 539/713 (75.60%), Postives = 593/713 (83.17%), Query Frame = 0
Match: A0A6I9TZ15 ((protein CNGC15b isoform X2 {ECO:0000313|RefSeq:XP_011089272.1}))
HSP 1 Score: 1103.58 bits (2853), Expect = 0.000e+0
Identity = 539/713 (75.60%), Postives = 593/713 (83.17%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGE---SETGRSLKTKVLLRVFSEDYERVKKKILDPRG-----------------------------VKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTRMGVNVH--PGSSPVNSLQKPEEPDF-SVDEE 678
MAY NSRSVRF DD F+ LPI NG+NVIKVKYKIDG++ +SSSK+GE + +SLK KVL RVFSEDYERVKKKILDPRG VK ++CIDIG TLEVILTIVRS+ D+FYMIQI++RFRTAYVAPSSRVFGRGELVI+SSKIA +Y + FWID IAALPLPQVLIW VIP+L GSTM NTKNVLRFIIIFQY+PRLF+IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASH+LGA WYLLA+ER EACWR CN++ C++ YFDC +V DS R WF+SSNIT C Y FGIYGDA+ ++VTT+ FFNKYFYCLWWGLKNLSSLGQ L T+TYVGEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKW ATRGVDEE LL+GLPLDLRRDIKRHLCYDLVRRVPLFDQMDE+MLDAICERLKPALCT+GTCL+REGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFAL AEDLKFVA+QFRRLHSKQLRHKFRF+SHQWR WAACFVQAAWRRYKKRK AEL+A E+ + ++K P+PGSGF++YAA+L AS R + H GS V SLQKP EPDF SVD++
Sbjct: 1 MAYTNSRSVRFHDDVEFSKLPIANGENVIKVKYKIDGTRVAESSSKKGEKSGNSGSKSLKAKVLSRVFSEDYERVKKKILDPRGPTVRRWNKIFLIACLVSLFVDPLFFYLPVVKKDICIDIGFTLEVILTIVRSVADIFYMIQIYIRFRTAYVAPSSRVFGRGELVIDSSKIASRYFRRYFWIDAIAALPLPQVLIWAVIPNLRGSTMMNTKNVLRFIIIFQYIPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHILGASWYLLAIERQEACWRHSCNLESPSCQYKYFDCRRVADSARNAWFRSSNITNRCNPENSLYPFGIYGDAVMAEVTTAKFFNKYFYCLWWGLKNLSSLGQNLGTSTYVGEIMFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWAATRGVDEEALLKGLPLDLRRDIKRHLCYDLVRRVPLFDQMDERMLDAICERLKPALCTQGTCLMREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALRAEDLKFVAAQFRRLHSKQLRHKFRFYSHQWRAWAACFVQAAWRRYKKRKSAAELRALESLVMETETSNGAGAEKESPAPGSGFSVYAARLAASRRGVHHKHSDSGSGTVGSLQKPAEPDFSSVDDD 713
BLAST of DCAR_018795 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3YLG8 ((Cyclic nucleotide-gated channel 16 {ECO:0000313|EMBL:AWN82517.1}) (Cyclic nucleotide-gated channel 17 {ECO:0000313|EMBL:AWN82518.1}) (putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|RefSeq:XP_016453101.1}))
HSP 1 Score: 1102.04 bits (2849), Expect = 0.000e+0
Identity = 539/711 (75.81%), Postives = 595/711 (83.68%), Query Frame = 0
Match: A0A1S3YLG8 ((Cyclic nucleotide-gated channel 16 {ECO:0000313|EMBL:AWN82517.1}) (Cyclic nucleotide-gated channel 17 {ECO:0000313|EMBL:AWN82518.1}) (putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|RefSeq:XP_016453101.1}))
HSP 1 Score: 1102.04 bits (2849), Expect = 0.000e+0
Identity = 539/711 (75.81%), Postives = 595/711 (83.68%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESE---TGRSLKTKVLLRVFSEDYERVKKKILDPRG-----------------------------VKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTR-MGVNVHPGSSPVNSLQKPEEPDFSVDEE 678
MAYGNSRSVRFQDD +NGDN+IKVKYKIDGSQ + ++++ E E TG+SLK KVL RVFSEDYERVKKKILDPRG V+D +CIDIGT LEV+LT++RSI DVFYMIQI+VRFRTAYVAPSSRVFGRGELVI+SSKI +Y K FWID+IAALPLPQVLIW +IP+LSGSTMANTKNVLRFIIIFQYLPRL++IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHV GACWYLL++ER EACWR C+ +E C YFDC +V D R WF+SSNITK C N Y FGIY D++T++VTT+ FFNKYFYCLWWGLKNLSSLGQ L T+TYVGEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRI+RTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEE LL+GLPLDLRRDIKRHLCYDLVRRVPLFDQMDE+MLDAICERLKPALCT+GTCLVREGDPVNEMLFIIRGNLDS+TTNGGRTGFFNSC IG GDFCGEELLTWALDPRP VILPSSTRTVKA+SEVE+FAL+AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACFVQAAWRRYKKRK AEL+A EN +T ++ DKN +PGSGF++YAA+L AS R S+ V+SLQKP EPDFSV+EE
Sbjct: 1 MAYGNSRSVRFQDDLESTKFATINGDNLIKVKYKIDGSQLPELANRKNEKEDIRTGKSLKAKVLSRVFSEDYERVKKKILDPRGPTIRRWNKIFLVACLVALFVDPLFFYLPVVQDKVCIDIGTNLEVVLTVIRSIADVFYMIQIYVRFRTAYVAPSSRVFGRGELVIDSSKIGHRYFKKGFWIDIIAALPLPQVLIWAIIPNLSGSTMANTKNVLRFIIIFQYLPRLYLIFPLSSQIVKTTGVVTETAWAGAAYNLMLYMLASHVGGACWYLLSIERQEACWRHTCSFEERSCDFGYFDCRRVKDPQRNAWFQSSNITKQCNPNTSDYPFGIYSDSVTANVTTAPFFNKYFYCLWWGLKNLSSLGQNLATSTYVGEIGFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEEALLKGLPLDLRRDIKRHLCYDLVRRVPLFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIIRGNLDSHTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPGVILPSSTRTVKAVSEVESFALVAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKKRKSAAELRALEN-IMNETESVSGQLDKNASAPGSGFSVYAAKLAASRRGHHKRSSSDSTAVSSLQKPAEPDFSVEEE 710
BLAST of DCAR_018795 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PQ37 ((Protein CNGC15c like {ECO:0000313|EMBL:PSR95201.1}))
HSP 1 Score: 1099.73 bits (2843), Expect = 0.000e+0
Identity = 532/710 (74.93%), Postives = 590/710 (83.10%), Query Frame = 0
Match: A0A2R6PQ37 ((Protein CNGC15c like {ECO:0000313|EMBL:PSR95201.1}))
HSP 1 Score: 1099.73 bits (2843), Expect = 0.000e+0
Identity = 532/710 (74.93%), Postives = 590/710 (83.10%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESETGRSLKTKVLLRVFSEDYERVKKKILDPRG-----------------------------VKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTRMGVNVHPGSSP---VNSLQKPEEPDFSVDEE 678
MAY NSRSVRF DD A LP +NGD V+KVKYK+DG + + S + S TGRSLK KVL RVFSEDYERVKKKILDPRG V+ ++CI+I TLE++LTI+RSITDVFY IQIFVRFRTAYVAPSSRVFGRGELVI+SSKIA +YL FWID++AALPLPQVLIW++IP+L GSTMANTKNVLRFI+IFQYLPRLF+IFPLS+QIVK+ GVVT TAWAGAAYNLMLYMLASHVLGACWYLL++ER EACWR+ C + C+ +FDC +V DS R+ WF+SSNIT +C N SY FGIY DA+T+++T+S F NKYFYCLWWGLKNLS LGQ L+T+TYVGEISFAII+A +GLVLFALLIGNMQ YLQSTTVRLEEWRIKRTDTEQWMHHRQLP ELRQSVRKYDQYKWVATRGVDEE LL+GLP+DLRRDIKRHLC DLVRRVPLFDQMDE+MLDAICERLKPALCTEGT LVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFAL AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACF+QAAWRR+K+RK AE K++E P A++ L D VP PGSGFA+YA++L AS R G N P S V+SLQKP EPDFSVDEE
Sbjct: 1 MAYTNSRSVRFHDDLELAKLPTINGDGVMKVKYKMDGKEIPGTRSNKAGS-TGRSLKAKVLSRVFSEDYERVKKKILDPRGPVIRRWNKIFLVACLVSLFVDPLFFYLPEVRGDVCINIAITLELVLTIIRSITDVFYAIQIFVRFRTAYVAPSSRVFGRGELVIDSSKIASRYLRTSFWIDVVAALPLPQVLIWVIIPNLRGSTMANTKNVLRFILIFQYLPRLFLIFPLSSQIVKAAGVVTATAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWRNACKFENQSCQSGFFDCHRVKDSDRVAWFQSSNITTLCDPNASSYPFGIYSDAMTTNLTSSMFLNKYFYCLWWGLKNLSCLGQNLSTSTYVGEISFAIIVATLGLVLFALLIGNMQRYLQSTTVRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEALLKGLPMDLRRDIKRHLCLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTSLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCCIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALRAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKRRKTAAEFKSQEYPTVAESEPLTEQLDVEVPPPGSGFAVYASRLAASIRRGAN-KPSRSDLDVVSSLQKPAEPDFSVDEE 708
BLAST of DCAR_018795 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G2VQA1 (Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042})
HSP 1 Score: 1099.35 bits (2842), Expect = 0.000e+0
Identity = 538/711 (75.67%), Postives = 593/711 (83.40%), Query Frame = 0
Match: A0A2G2VQA1 (Cyclic nucleotide-binding domain-containing protein {ECO:0000259|PROSITE:PS50042})
HSP 1 Score: 1099.35 bits (2842), Expect = 0.000e+0
Identity = 538/711 (75.67%), Postives = 593/711 (83.40%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKR-GESE---TGRSLKTKVLLRVFSEDYERVKKKILDPRG-----------------------------VKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTRMGVNVHPGSSPVNSLQKPEEPDFSVDEE 678
MAYGNSRSVRFQDD +NGDNVIKVKYKIDGS+ + R E E TG+SLK KVL RVFSEDYERVK+KILDPRG V+D +CIDIGT LE+ LT++RSI DVFYMIQI++RFRTAYVAPSSRVFGRGELVI+SSKIA++Y K FWIDLIAALPLPQVLIW +IP+LSGSTMANTKNVLRFIIIFQYLPR ++IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHV GACWYLL++ER EACWR C+ +E C YFDC +V + +R WF+SSNITK C N Y FGIY DA+T+ VTT+SFFNKYFYCLWWGLKNLSSLGQ L T+TY+GEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRI+RTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEE L++GLPLDLRRDIKRHLCYDLVRRVPLFDQMDE+MLDAICERLKPALCT+GTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRP VILPSSTRTVKA+SEVE+FAL+AEDLKFVA+QFRRLHSKQLRHKFRF+SHQWRTWAACF+QAAWRR+KKRK AEL+A EN +T +L SDKN SPG GF AA+L A++R G + H S V+SLQKP EPDFSVDEE
Sbjct: 1 MAYGNSRSVRFQDDLESTKYATMNGDNVIKVKYKIDGSRLPEPPGSRMSEKEPDRTGKSLKAKVLSRVFSEDYERVKRKILDPRGPTVRRWNKILLVACLIGLFVDPLFFYLPVVQDEVCIDIGTNLEIALTVIRSIADVFYMIQIYIRFRTAYVAPSSRVFGRGELVIDSSKIAQRYYKKGFWIDLIAALPLPQVLIWGIIPNLSGSTMANTKNVLRFIIIFQYLPRFYLIFPLSSQIVKTTGVVTETAWAGAAYNLMLYMLASHVGGACWYLLSIERQEACWRHACSFEERSCDFGYFDCRRVKEPLRSAWFRSSNITKQCDPNASDYPFGIYSDAVTASVTTASFFNKYFYCLWWGLKNLSSLGQNLTTSTYIGEIGFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEEALMKGLPLDLRRDIKRHLCYDLVRRVPLFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPGVILPSSTRTVKAVSEVESFALVAEDLKFVAAQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKNAAELRALEN-LIDETESLNGQSDKNAASPGPGF---AARL-ATSRRGHHKHTSSDGVSSLQKPAEPDFSVDEE 706
BLAST of DCAR_018795 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7XP13 ((putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|RefSeq:XP_009788225.1}))
HSP 1 Score: 1098.96 bits (2841), Expect = 0.000e+0
Identity = 539/711 (75.81%), Postives = 595/711 (83.68%), Query Frame = 0
Match: A0A1U7XP13 ((putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|RefSeq:XP_009788225.1}))
HSP 1 Score: 1098.96 bits (2841), Expect = 0.000e+0
Identity = 539/711 (75.81%), Postives = 595/711 (83.68%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESE---TGRSLKTKVLLRVFSEDYERVKKKILDPRG-----------------------------VKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTR-MGVNVHPGSSPVNSLQKPEEPDFSVDEE 678
MAYGNSRSVRFQDD +NGDN+IKVKYKIDGS+ + +S++ E E TG+SLK KVL RVFSEDYERVKKKILDPRG V+D +CIDIGT LEV+LT++RSI DVFYMIQI+VRFRTAYVAPSSRVFGRGELVI+SSKI +Y K FWID+IAALPLPQVLIW +IP+LSGSTMANTKNVLRFIIIFQYLPRL++IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHV GACWYLL++ER EACWR C+ +E C YFDC +V D R WF+SSNITK C N Y FGIY D++T++VTT+ FFNKYFYCLWWGLKNLSSLGQ L T+TYVGEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRI+RTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEE LL+GLPLDLRRDIKRHLCYDLVRRVPLFDQMDE+MLDAICERLKPALCT+GTCLVREGDPVNEMLFIIRGNLDS+TTNGGRTGFFNSC IG GDFCGEELLTWALDPRP VILPSSTRTVKA+SEVE+FAL+AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACFVQAAWRRYKKRK AEL+A EN +T ++ DKN +PGSGF++YAA+L AS R S+ V+SLQKP EPDFSV+EE
Sbjct: 1 MAYGNSRSVRFQDDLDTTKYATINGDNLIKVKYKIDGSRLPELASRKNEKEDITTGKSLKAKVLSRVFSEDYERVKKKILDPRGPTIRRWNKIFLVACLVALFVDPLFFYLPVVQDKVCIDIGTNLEVVLTVIRSIADVFYMIQIYVRFRTAYVAPSSRVFGRGELVIDSSKIGHRYFKKGFWIDIIAALPLPQVLIWAIIPNLSGSTMANTKNVLRFIIIFQYLPRLYLIFPLSSQIVKTTGVVTETAWAGAAYNLMLYMLASHVGGACWYLLSIERQEACWRHACSFEERSCDFGYFDCWRVKDPQRNAWFQSSNITKQCNPNTSDYPFGIYSDSVTANVTTAPFFNKYFYCLWWGLKNLSSLGQNLATSTYVGEIGFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEEALLKGLPLDLRRDIKRHLCYDLVRRVPLFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIIRGNLDSHTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPGVILPSSTRTVKAVSEVESFALVAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKKRKSAAELRALEN-IMNETESVSGQMDKNASAPGSGFSVYAAKLAASRRGHHKRSSSDSTAVSSLQKPAEPDFSVEEE 710
BLAST of DCAR_018795 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2U8YL68 ((Cyclic nucleotide-gated channel 14 {ECO:0000313|EMBL:AWN82515.1}))
HSP 1 Score: 1098.96 bits (2841), Expect = 0.000e+0
Identity = 539/711 (75.81%), Postives = 595/711 (83.68%), Query Frame = 0
Match: A0A2U8YL68 ((Cyclic nucleotide-gated channel 14 {ECO:0000313|EMBL:AWN82515.1}))
HSP 1 Score: 1098.96 bits (2841), Expect = 0.000e+0
Identity = 539/711 (75.81%), Postives = 595/711 (83.68%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKRGESE---TGRSLKTKVLLRVFSEDYERVKKKILDPRG-----------------------------VKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTR-MGVNVHPGSSPVNSLQKPEEPDFSVDEE 678
MAYGNSRSVRFQDD +NGDN+IKVKYKIDGS+ + +S++ E E TG+SLK KVL RVFSEDYERVKKKILDPRG V+D +CIDIGT LEV+LT++RSI DVFYMIQI+VRFRTAYVAPSSRVFGRGELVI+SSKI +Y K FWID+IAALPLPQVLIW +IP+LSGSTMANTKNVLRFIIIFQYLPRL++IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHV GACWYLL++ER EACWR C+ +E C YFDC +V D R WF+SSNITK C N Y FGIY D++T++VTT+ FFNKYFYCLWWGLKNLSSLGQ L T+TYVGEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRI+RTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEE LL+GLPLDLRRDIKRHLCYDLVRRVPLFDQMDE+MLDAICERLKPALCT+GTCLVREGDPVNEMLFIIRGNLDS+TTNGGRTGFFNSC IG GDFCGEELLTWALDPRP VILPSSTRTVKA+SEVE+FAL+AEDLKFVASQFRRLHSKQLRHKFRF+SHQWRTWAACFVQAAWRRYKKRK AEL+A EN +T ++ DKN +PGSGF++YAA+L AS R S+ V+SLQKP EPDFSV+EE
Sbjct: 1 MAYGNSRSVRFQDDLDTTKYATINGDNLIKVKYKIDGSRLPELASRKNEKEDITTGKSLKAKVLSRVFSEDYERVKKKILDPRGPTIRRWNKIFLVACLVALFVDPLFFYLPVVQDKVCIDIGTNLEVVLTVIRSIADVFYMIQIYVRFRTAYVAPSSRVFGRGELVIDSSKIGHRYFKKGFWIDIIAALPLPQVLIWAIIPNLSGSTMANTKNVLRFIIIFQYLPRLYLIFPLSSQIVKTTGVVTETAWAGAAYNLMLYMLASHVGGACWYLLSIERQEACWRHACSFEERSCDFGYFDCWRVKDPQRNAWFQSSNITKQCNPNTSDYPFGIYSDSVTANVTTAPFFNKYFYCLWWGLKNLSSLGQNLATSTYVGEIGFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEEALLKGLPLDLRRDIKRHLCYDLVRRVPLFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIIRGNLDSHTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPGVILPSSTRTVKAVSEVESFALVAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFVQAAWRRYKKRKSAAELRALEN-IMNETESVSGQMDKNASAPGSGFSVYAAKLAASRRGHHKRSSSDSTAVSSLQKPAEPDFSVEEE 710
BLAST of DCAR_018795 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G2YHN6 ((Putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|EMBL:PHT69273.1}))
HSP 1 Score: 1097.8 bits (2838), Expect = 0.000e+0
Identity = 538/711 (75.67%), Postives = 592/711 (83.26%), Query Frame = 0
Match: A0A2G2YHN6 ((Putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|EMBL:PHT69273.1}))
HSP 1 Score: 1097.8 bits (2838), Expect = 0.000e+0
Identity = 538/711 (75.67%), Postives = 592/711 (83.26%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKR-GESE---TGRSLKTKVLLRVFSEDYERVKKKILDPRG-----------------------------VKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTRMGVNVHPGSSPVNSLQKPEEPDFSVDEE 678
MAYGNSRSVRFQDD +NGDNVIKVKYKIDGS+ + R E E TG+SLK KVL RVFSEDYERVK+KILDPRG V+D +CIDIGT LE+ LT++RSI DVFYMIQI++RFRTAYVAPSSRVFGRGELVI+SSKIA++Y K FWIDLIAALPLPQVLIW +IP+LSGSTMANTKNVLRFIIIFQYLPR ++IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHV GACWYLL++ER EACWR C+ +E C YFDC +V + +R WF+SSNITK C N Y FGIY DA+T+ VTT+SFFNKYFYCLWWGLKNLSSLGQ L T+TY+GEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRI+RTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEE L++GLPLDLRRDIKRHLCYDLVRRVPLFDQMDE+MLDAICERLKPALCT+GTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRP VILPSSTRTVKA+SEVE+FAL+AEDLKFVA+QFRRLHSKQLRHKFRF+SHQWRTWAACF+QAAWRR+KKRK AEL+A EN +T L SDKN SPG GF AA+L A++R G + H S V+SLQKP EPDFSVDEE
Sbjct: 1 MAYGNSRSVRFQDDLESTKYATMNGDNVIKVKYKIDGSRLPEPPGSRMSEKEPDRTGKSLKAKVLSRVFSEDYERVKRKILDPRGPTVRRWNKILLVACLIGLFVDPLFFYLPVVQDEVCIDIGTNLEIALTVIRSIADVFYMIQIYIRFRTAYVAPSSRVFGRGELVIDSSKIAQRYYKKGFWIDLIAALPLPQVLIWGIIPNLSGSTMANTKNVLRFIIIFQYLPRFYLIFPLSSQIVKTTGVVTETAWAGAAYNLMLYMLASHVGGACWYLLSIERQEACWRHACSFEERSCDFGYFDCRRVKEPLRSAWFRSSNITKQCDPNASDYPFGIYSDAVTASVTTASFFNKYFYCLWWGLKNLSSLGQNLTTSTYIGEIGFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEEALMKGLPLDLRRDIKRHLCYDLVRRVPLFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPGVILPSSTRTVKAVSEVESFALVAEDLKFVAAQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKNAAELRALEN-LIDETEPLNGQSDKNAASPGPGF---AARL-ATSRRGHHKHTSSDGVSSLQKPAEPDFSVDEE 706
BLAST of DCAR_018795 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G3BBP3 ((Putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|EMBL:PHU03879.1}))
HSP 1 Score: 1097.8 bits (2838), Expect = 0.000e+0
Identity = 538/711 (75.67%), Postives = 592/711 (83.26%), Query Frame = 0
Match: A0A2G3BBP3 ((Putative cyclic nucleotide-gated ion channel 15 {ECO:0000313|EMBL:PHU03879.1}))
HSP 1 Score: 1097.8 bits (2838), Expect = 0.000e+0
Identity = 538/711 (75.67%), Postives = 592/711 (83.26%), Query Frame = 0
Query: 1 MAYGNSRSVRFQDDPGFANLPIVNGDNVIKVKYKIDGSQFTQSSSKR-GESE---TGRSLKTKVLLRVFSEDYERVKKKILDPRG-----------------------------VKDNLCIDIGTTLEVILTIVRSITDVFYMIQIFVRFRTAYVAPSSRVFGRGELVIESSKIAKKYLYKDFWIDLIAALPLPQVLIWIVIPSLSGSTMANTKNVLRFIIIFQYLPRLFVIFPLSAQIVKSTGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERLEACWRSVCNIDESLCKHDYFDCSKVNDSVRIDWFKSSNITKICYLNVDSYAFGIYGDALTSDVTTSSFFNKYFYCLWWGLKNLSSLGQGLNTTTYVGEISFAIIIAVMGLVLFALLIGNMQTYLQSTTVRLEEWRIKRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEETLLQGLPLDLRRDIKRHLCYDLVRRVPLFDQMDEQMLDAICERLKPALCTEGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCPIGSGDFCGEELLTWALDPRPSVILPSSTRTVKAISEVEAFALMAEDLKFVASQFRRLHSKQLRHKFRFHSHQWRTWAACFVQAAWRRYKKRKITAELKAKENPAAAQTANLKLHSDKNVPSPGSGFALYAAQLTASTRMGVNVHPGSSPVNSLQKPEEPDFSVDEE 678
MAYGNSRSVRFQDD +NGDNVIKVKYKIDGS+ + R E E TG+SLK KVL RVFSEDYERVK+KILDPRG V+D +CIDIGT LE+ LT++RSI DVFYMIQI++RFRTAYVAPSSRVFGRGELVI+SSKIA++Y K FWIDLIAALPLPQVLIW +IP+LSGSTMANTKNVLRFIIIFQYLPR ++IFPLS+QIVK+TGVVTETAWAGAAYNLMLYMLASHV GACWYLL++ER EACWR C+ +E C YFDC +V + +R WF+SSNITK C N Y FGIY DA+T+ VTT+SFFNKYFYCLWWGLKNLSSLGQ L T+TY+GEI FAIIIA +GLVLFALLIGNMQTYLQSTTVRLEEWRI+RTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEE L++GLPLDLRRDIKRHLCYDLVRRVPLFDQMDE+MLDAICERLKPALCT+GTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSC IG GDFCGEELLTWALDPRP VILPSSTRTVKA+SEVE+FAL+AEDLKFVA+QFRRLHSKQLRHKFRF+SHQWRTWAACF+QAAWRR+KKRK AEL+A EN +T L SDKN SPG GF AA+L A++R G + H S V+SLQKP EPDFSVDEE
Sbjct: 1 MAYGNSRSVRFQDDLESTKYATMNGDNVIKVKYKIDGSRLPEPPGSRMSEKEPDRTGKSLKAKVLSRVFSEDYERVKRKILDPRGPTVRRWNKILLVACLIGLFVDPLFFYLPVVQDEVCIDIGTNLEIALTVIRSIADVFYMIQIYIRFRTAYVAPSSRVFGRGELVIDSSKIAQRYYKKGFWIDLIAALPLPQVLIWGIIPNLSGSTMANTKNVLRFIIIFQYLPRFYLIFPLSSQIVKTTGVVTETAWAGAAYNLMLYMLASHVGGACWYLLSIERQEACWRHACSFEERSCDFGYFDCRRVKEPLRSAWFRSSNITKQCDPNASDYPFGIYSDAVTASVTTASFFNKYFYCLWWGLKNLSSLGQNLTTSTYIGEIGFAIIIATLGLVLFALLIGNMQTYLQSTTVRLEEWRIRRTDTEQWMHHRQLPQELRQSVRKYDQYKWVATRGVDEEALMKGLPLDLRRDIKRHLCYDLVRRVPLFDQMDERMLDAICERLKPALCTQGTCLVREGDPVNEMLFIIRGNLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPGVILPSSTRTVKAVSEVESFALVAEDLKFVAAQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKNAAELRALEN-LIDETEPLNGQSDKNAASPGPGF---AARL-ATSRRGHHKHTSSDGVSSLQKPAEPDFSVDEE 706
| Match Name | Stats | Description |
|---|---|---|
| A0A4S4EZM9 | E-Value: 0.000e+0, PID: 76.23 | Cyclic nucleotide-binding domain-containing protei... [more] |
| A0A5J5BQS2 | E-Value: 0.000e+0, PID: 76.08 | Cyclic nucleotide-binding domain-containing protei... [more] |
| A0A6I9TZ15 | E-Value: 0.000e+0, PID: 75.60 | (protein CNGC15b isoform X2 {ECO:0000313|RefSeq:XP... [more] |
| A0A1S3YLG8 | E-Value: 0.000e+0, PID: 75.81 | (Cyclic nucleotide-gated channel 16 {ECO:0000313|E... [more] |
| A0A2R6PQ37 | E-Value: 0.000e+0, PID: 74.93 | (Protein CNGC15c like {ECO:0000313|EMBL:PSR95201.1... [more] |
| A0A2G2VQA1 | E-Value: 0.000e+0, PID: 75.67 | Cyclic nucleotide-binding domain-containing protei... [more] |
| A0A1U7XP13 | E-Value: 0.000e+0, PID: 75.81 | (putative cyclic nucleotide-gated ion channel 15 {... [more] |
| A0A2U8YL68 | E-Value: 0.000e+0, PID: 75.81 | (Cyclic nucleotide-gated channel 14 {ECO:0000313|E... [more] |
| A0A2G2YHN6 | E-Value: 0.000e+0, PID: 75.67 | (Putative cyclic nucleotide-gated ion channel 15 {... [more] |
| A0A2G3BBP3 | E-Value: 0.000e+0, PID: 75.67 | (Putative cyclic nucleotide-gated ion channel 15 {... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |