Resource Type:
Polypeptide
Name:
DCAR_018827
Identifier:
DCAR_018827.mRNA-protein
Sequence:
MEKGVKFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLIT
RENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRI
KITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTK
SSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTA
SQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEF
EQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTP
LRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWR
DRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSG
TTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQ
QSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQ
RIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLE
HPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLH
PGASLLAVGKQSPPIFALYWDKKAQFSLQATMWDSMLLLCHRIKIAYGGI
VRGVHLGSSALDILPILDEDDEN*
Sequence Length:
674
Sequence Checksum:
13c2dd4fbdd196ae77b74969f2c4c9cd
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_018827, derives from mRNA, DCAR_018827. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_018827 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_018827 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BZM2 ((Uncharacterized protein {ECO:0000313|EMBL:MPA73441.1}))
HSP 1 Score: 993.416 bits (2567), Expect = 0.000e+0
Identity = 508/671 (75.71%), Postives = 575/671 (85.69%), Query Frame = 0
Match: A0A5B7BZM2 ((Uncharacterized protein {ECO:0000313|EMBL:MPA73441.1}))
HSP 1 Score: 993.416 bits (2567), Expect = 0.000e+0
Identity = 508/671 (75.71%), Postives = 575/671 (85.69%), Query Frame = 0
Query: 6 KFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQS-LFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQA--TMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 673
KF+VY+NPALSAAL + SLRPSK FL ILSLSTASAF+LL++I+RE+GIID LKL + S+ V YL KAIQ ++GLIL+G M+AL KA+SLWR + GVTV SPSKG EQ LTNRQLGLLGIRP+ EQV SE SKK K+K ++V PS L+PLHQP+ SSSR SR SS+KSN+SGGSK HSFSTP+KS S S L+L+ +Q SV SPG DQLVA+PWSNK+ASSTKEITTEE+ EQFLAD+ EKISESA KLATPPPT SGFG+ATPNTISSS NTSGT RSTPLRPVRMSPGSQKFSTPPKKGEGDLPP MSMEESI+A+EHLGIYPQIE+WRD LRQWFSSVLLNP+L+KIE SHI+VMQAAAKL IS+TI+Q+GTDLP++GT+ SPI+RT++WQPA ++DE+GLLHQLR LDA M KLP GN QQSPQQNS IP++QECI+AI EHQRLHALM+GEWVKGLLP SSVRADY VQRI+ELAEG+C+KNYEYLGSGEVYDKVNKK TLELPTDSHLLLYLFCAFLEHP WMLHVD T YAGAQSSKNPLFLG+LPPKERFPEKYLAV+SGVPSVLHPGA +LAVGKQSPPIFALYWDKK QFSLQ +WDS+LLLCHRI I YGG+VRG+HLGSSAL ILP+LD + E
Sbjct: 19 KFSVYQNPALSAALTSNSLRPSKSTFLCILSLSTASAFALLSIISRESGIIDTLKLRYVSKEVTYLLAKAIQTMMGLILIGTMLALFKAISLWRARNAAGVTVISPSKGTKEQTCLTNRQLGLLGIRPKVEQVVSEPSKKPPKSKFNSVSPSDFLVPLHQPITSSSRSSRLSSNKSNTSGGSKIHSFSTPSKSPGSSSPLYLV------SQLPSVQTSPGLDQLVATPWSNKQASSTKEITTEEKLEQFLADVAEKISESAVKLATPPPTISGFGIATPNTISSSANTSGTRRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPHMSMEESIEAFEHLGIYPQIEQWRDHLRQWFSSVLLNPVLNKIEASHIQVMQAAAKLGISITINQMGTDLPTTGTSATVSPIERTSEWQPAFTLDEDGLLHQLRV----TLDAFMSKLPAGNLQQSPQQNSLIPLIQECINAIAEHQRLHALMKGEWVKGLLPQSSVRADYTVQRIRELAEGTCLKNYEYLGSGEVYDKVNKKRTLELPTDSHLLLYLFCAFLEHPKWMLHVDSTSYAGAQSSKNPLFLGVLPPKERFPEKYLAVISGVPSVLHPGACILAVGKQSPPIFALYWDKKPQFSLQGRTALWDSILLLCHRINIGYGGVVRGMHLGSSALGILPVLDTETEE 679
BLAST of DCAR_018827 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BLL7 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8544015.1}))
HSP 1 Score: 967.222 bits (2499), Expect = 0.000e+0
Identity = 492/673 (73.11%), Postives = 567/673 (84.25%), Query Frame = 0
Match: A0A5J5BLL7 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8544015.1}))
HSP 1 Score: 967.222 bits (2499), Expect = 0.000e+0
Identity = 492/673 (73.11%), Postives = 567/673 (84.25%), Query Frame = 0
Query: 3 KGVKFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQ--ATMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 673
K KF+VY+NPALS+AL + SLRPSK F+ ILSL TASAF+LL +I+RE GIID KL + S+ V YL KAIQ ++GL+L+G M+AL KA+SLWR + GVTV SPSKG EQ LTNRQLGLLGIRP+ V SE S K K+K +++ PS L+PLHQ + SS+R SR S++KSN+SG S HSFSTP+KS S S + VP Q SV SPG DQLVA+PWS KRASSTKEITTEE+ EQFLAD+ EKISESA KLATPPPT GFG+ATPNTI+SS NTSGTTRSTPLR VRMSPGSQKFSTPPKKGEGDLPPPMSMEESI+A+EHLGIYPQIE+WRD LRQWFSSVLLNPL++KIE SH++VM+AAAKL IS+ ++QVG+ LP++G + SPI+RT++WQPA ++DE+GLLHQLR LVQALDASMPKL +GN QQSPQQNS IPI+QECIDAITEHQRLHALM+GEWVKGLLP SSVRADY VQR++ELAEG+C+KNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYL CAFLEHP WMLHVD T YAGAQSSKNPLFLG+LPPKERFPEKYLAV+SGVPSVLHPGA +LAVG+QSPPIFA YWDKK QFSLQ + +WDS+LLL HRIK YGG+VRGVHLGSS+L ILP+LD + E+
Sbjct: 16 KPAKFSVYQNPALSSALTSNSLRPSKSTFICILSLFTASAFALLNIISREGGIIDTSKLRYVSKEVTYLIAKAIQTMVGLVLIGTMLALIKAISLWRTRNAAGVTVLSPSKGTKEQTRLTNRQLGLLGIRPK---VVSEPSMKPPKSKFNSLSPSDVLVPLHQAITSSNRSSRLSNNKSNTSGRSTMHSFSTPSKSPGSSSPLYL-VPAISPQLPSVQTSPGLDQLVATPWSIKRASSTKEITTEEKLEQFLADVAEKISESAVKLATPPPTIKGFGIATPNTITSSANTSGTTRSTPLRAVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIEAFEHLGIYPQIEQWRDHLRQWFSSVLLNPLVNKIETSHMQVMKAAAKLGISIKVNQVGSGLPTTGASATVSPIERTSEWQPAFTLDEDGLLHQLRTTLVQALDASMPKLLVGNLQQSPQQNSFIPIIQECIDAITEHQRLHALMKGEWVKGLLPQSSVRADYTVQRVQELAEGTCLKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLLCAFLEHPKWMLHVDSTSYAGAQSSKNPLFLGVLPPKERFPEKYLAVISGVPSVLHPGACILAVGRQSPPIFASYWDKKPQFSLQGRSALWDSILLLLHRIKTGYGGVVRGVHLGSSSLAILPVLDPETED 684
BLAST of DCAR_018827 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2KNB9 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL01p023227:mrna}))
HSP 1 Score: 962.6 bits (2487), Expect = 0.000e+0
Identity = 469/670 (70.00%), Postives = 555/670 (82.84%), Query Frame = 0
Match: A0A7N2KNB9 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL01p023227:mrna}))
HSP 1 Score: 962.6 bits (2487), Expect = 0.000e+0
Identity = 469/670 (70.00%), Postives = 555/670 (82.84%), Query Frame = 0
Query: 6 KFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQA--TMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 673
KF+VY+N ALSAAL SL P KY L I LS+ASAF+LLT+++RENG ID LK Q AYLF KAIQ ++GL+ G + AL KA+SL R + V V S +KG +Q L+NRQL LLGI+P+ +QVAS+SSKK K++S P S L+PLHQP+ S +R SR S+D+SNSSGG++ + STP+KS +S S + VP + +Q SV NSPG D +V+SPWSNKR SS KEIT+EE+ EQFLA++DEKI+ESA +LATPPPT SGFG+A+PNT++SS NTSGTTRSTPLR VRMSPGSQKFSTPPKKGEGDLP PMSMEESI+A+EHLGIYPQIE+WRD +RQWFSSVLLNPLL KIE SHI+VMQAAA+L IS+TISQVG+DLP++GT T SPI R+ +WQPA ++DE+G+LHQLRA LVQA+D+S KLP+ N QQSPQQN IPI+QEC+DAITEHQRLHAL++GEWVKGLLP SSVRADY VQRI+ELAEG+C+KNYEYLGSGEVYDK NKKWTLELPTDSHLLLYLFCAFLEHP WMLHVDPT Y GAQS KNPLFLG+LPPKERFP+KY+AVVSGVPS HPGAS+L +G+QSPPIFALYWDKK QFSLQ +WDS+LLLCHRIK+ YGGIVRG+HLGSSAL ILP+L + E+
Sbjct: 16 KFSVYQNAALSAALTAKSLEPPKYTLLCIFCLSSASAFALLTVLSRENGFIDDLKFISLPQETAYLFAKAIQTIVGLVFFGTIFALFKAISLCRERNIAAVPVLSSNKGNKDQTSLSNRQLELLGIKPKVKQVASDSSKKPPKSRSHLTPSSDVLVPLHQPITSPNRSSRTSADRSNSSGGNRIRAVSTPSKSPSSSSSLYL-VPGSVSQLPSVQNSPGVDSVVSSPWSNKRTSSGKEITSEEQLEQFLAEVDEKITESAGQLATPPPTISGFGIASPNTVASSANTSGTTRSTPLRSVRMSPGSQKFSTPPKKGEGDLPAPMSMEESIEAFEHLGIYPQIEQWRDHIRQWFSSVLLNPLLKKIEMSHIQVMQAAARLGISITISQVGSDLPTTGTPTTVSPIDRSKEWQPAFTLDEDGILHQLRATLVQAIDSSTSKLPLANLQQSPQQNPLIPIMQECVDAITEHQRLHALVKGEWVKGLLPQSSVRADYTVQRIRELAEGTCLKNYEYLGSGEVYDKKNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHVDPTSYVGAQSIKNPLFLGVLPPKERFPDKYVAVVSGVPSFFHPGASILIIGRQSPPIFALYWDKKLQFSLQGRTALWDSILLLCHRIKVGYGGIVRGMHLGSSALSILPVLTLETED 684
BLAST of DCAR_018827 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068UHN9 ((Uncharacterized protein {ECO:0000313|EMBL:CDP07143.1}))
HSP 1 Score: 957.977 bits (2475), Expect = 0.000e+0
Identity = 462/668 (69.16%), Postives = 556/668 (83.23%), Query Frame = 0
Match: A0A068UHN9 ((Uncharacterized protein {ECO:0000313|EMBL:CDP07143.1}))
HSP 1 Score: 957.977 bits (2475), Expect = 0.000e+0
Identity = 462/668 (69.16%), Postives = 556/668 (83.23%), Query Frame = 0
Query: 6 KFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQATMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 673
KF VY+NPALSAAL + S RPS FLVIL+LS+ASA +L T E G+ D L+L Q V+ +F K IQ + L+L G ++A KA+S+W+++ VT+ S SKG +E +HLT RQLGL+G++P+ E +SSKK K+K+++ PS L+PLHQP+ + SR DKS++S G+K H+FS+ +KS +S SL+L VPT +QS V NSPG D+L+A+PWSNKRA+S KEITTE+E E+FLAD+DEKISESASKLATPPPT +GF A+P TI SS NTSGTTRSTPLRPVRMSPGSQKFSTPPKKGE DLPPPMS+EESI+A+EHLGIYP+IE+WRDRLRQWFSSVLLNPLL+KI++SH++VMQAAAKL +++TI+QVG+D PS GT SP+KRTN+WQPA++VDE+GLL QLR LVQALDA +PKLP+GN QQSPQQNS +PILQECIDAITEHQRLH LM+GEW KGLLP SSV+ADY VQRI+ELAEG+CVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHP+WMLHVDPT YAG+QSSKNPLFLG+LPPK+RFPEKY+AVVS PS+LHPGA +LAVGKQSPPIF LYWDKK QFSLQAT+WDS++LLC++IK +YG IVRG+HLGSSAL ILP+ + N
Sbjct: 14 KFTVYQNPALSAALTSKSRRPSVSTFLVILALSSASAVALFTATCWEKGLADILRLRNVPQDVSSVFVKVIQTITSLVLFGTVVAFIKAISIWKVRDAAEVTILSSSKGKEEHLHLTARQLGLIGVKPKVEPAVVDSSKKPPKSKNASASPSQTLVPLHQPIPAPGYSSRVRGDKSSTSRGNKMHAFSSSSKSPSSPSLYL--VPTASSQS-PVQNSPGSDKLLANPWSNKRATSHKEITTEQELEKFLADVDEKISESASKLATPPPTINGFSRASPTTIVSSANTSGTTRSTPLRPVRMSPGSQKFSTPPKKGESDLPPPMSIEESIEAFEHLGIYPEIEQWRDRLRQWFSSVLLNPLLTKIDSSHVRVMQAAAKLGVTITITQVGSDTPSKGTMATLSPVKRTNEWQPAIAVDEDGLLQQLRTTLVQALDACLPKLPLGNIQQSPQQNSLVPILQECIDAITEHQRLHTLMKGEWGKGLLPQSSVQADYTVQRIRELAEGTCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPSWMLHVDPTSYAGSQSSKNPLFLGVLPPKDRFPEKYIAVVSCFPSILHPGACILAVGKQSPPIFVLYWDKKPQFSLQATLWDSIILLCYKIKTSYGDIVRGMHLGSSALRILPVFHPETVN 678
BLAST of DCAR_018827 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4F2M9 ((Uncharacterized protein {ECO:0000313|EMBL:THG23165.1}))
HSP 1 Score: 955.281 bits (2468), Expect = 0.000e+0
Identity = 482/715 (67.41%), Postives = 555/715 (77.62%), Query Frame = 0
Match: A0A4S4F2M9 ((Uncharacterized protein {ECO:0000313|EMBL:THG23165.1}))
HSP 1 Score: 955.281 bits (2468), Expect = 0.000e+0
Identity = 482/715 (67.41%), Postives = 555/715 (77.62%), Query Frame = 0
Query: 3 KGVKFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPI-KRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQ---------------------------------FSLQATM-------WDSMLLLCHR---IKIAYGGIVRGVHLGSSALDILPILDEDDEN 673
K KFAVY+NPALSAA+ T SLRP+K FL ILSLSTASAF+LL+ RENG+ID LKLGF S VAYLF KAIQI+LG +G M A KA+SLWR + G+ V SPSKG EQ LTNRQLGLLGIR S+ +E +K KTK ++ + L+PLHQP+ SS+R S+ S KSN+S GSK HSFSTP+K + S SL + VP +Q S SPG DQLVA+PW NKRAS KEITTEEE EQFLAD+ EKISESA K+ATPPPT SGFG+A+PN I+SS NTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESI+A+E LGI+PQIE WRDR+RQWFSSVLLNPLL+KIE SH++VMQAAAKL IS+TIS+VG+DLP++GT SPI +R NDW+PA +DE+GLLHQLRA LVQALDASMPKLP+GN QQSPQQN+ PI+QECIDAITEHQRLH+LM+GEW KGLLP SSVRAD+ VQRI+ELAEG+C+KNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHP WMLHVDPT AGAQSSKNPLFLG+LPPKERFPEKY+A +SGVP VLHPGA +LA+G+QSPPIFALYWDKK Q FS + D++L C + IK+A GGIVRG++LGSSAL ILP+L + E+
Sbjct: 19 KPSKFAVYQNPALSAAMSTNSLRPTKPTFLCILSLSTASAFALLSFSARENGLIDSLKLGFISPDVAYLFAKAIQIMLGSFFVGTMFAFIKAISLWRARNAAGIAVISPSKGTKEQTLLTNRQLGLLGIR--SKVAVTEPLRKPPKTKFNSASTADVLVPLHQPVTSSNRSSQLSGGKSNTSSGSKTHSFSTPSKPSGSPSLLYL-VPAASSQLPSAQTSPGFDQLVATPWLNKRASFNKEITTEEELEQFLADVGEKISESAGKMATPPPTISGFGMASPNAIASSANTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIEAFERLGIFPQIELWRDRIRQWFSSVLLNPLLNKIETSHMQVMQAAAKLGISITISKVGSDLPTTGTPATVSPIERRPNDWKPAFDLDEDGLLHQLRATLVQALDASMPKLPLGNLQQSPQQNTMTPIVQECIDAITEHQRLHSLMKGEWAKGLLPQSSVRADFTVQRIRELAEGTCLKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHVDPTSSAGAQSSKNPLFLGVLPPKERFPEKYVAAISGVPHVLHPGACILAIGRQSPPIFALYWDKKPQTFVCKLLGQSHIDQRGTLQPIISVLAPSTLQEAFSFEEEQNREAPAKVDNILPGCEKPVMIKVASGGIVRGMNLGSSALGILPVLGPETED 730
BLAST of DCAR_018827 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PF21 ((Transmembrane protein {ECO:0000313|EMBL:PSR89985.1}))
HSP 1 Score: 951.429 bits (2458), Expect = 0.000e+0
Identity = 475/667 (71.21%), Postives = 558/667 (83.66%), Query Frame = 0
Match: A0A2R6PF21 ((Transmembrane protein {ECO:0000313|EMBL:PSR89985.1}))
HSP 1 Score: 951.429 bits (2458), Expect = 0.000e+0
Identity = 475/667 (71.21%), Postives = 558/667 (83.66%), Query Frame = 0
Query: 6 KFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQA--TMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDED 670
KFAVY+NPALSAAL T SLRPS FL ILS+ ASAF+LL++I RENG ID KLGF S VAY FTKAIQ +LG I +G M+AL KA+SLW+ + + G+ SPSKG EQ LTNRQLGLLGIRP++E+ +E KK SKTK P L+PLHQP+ SS+R S+ SS KSN++ GSK HSFSTP++S+ S S + VP +Q S PG DQLV++PWS+KRASS K ITTEEE EQFLAD+ E+I ESA KLATPPPT SGFG+A+PNTI++S N+SGTTRSTPLRPVRMSPGSQKFSTPPKK EGDLPPPMS+EESI+A+E++GIYPQIE+WRDRLRQWFSSVLLNPLL+KI+ SH++VMQ AAKL ISVT+S+VG DLP++GTT SP++R N+WQPA+++DE+ LLHQLRA LVQALD S K +GN +QS QQNS IPI+Q+C+DAITEHQRLHALM+GEW KGLLP SSVR DY VQRI+E AEG+C+KNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHP WMLHVD + YAG+QSSKNPLFLG+LPPK+RFPEKY+AV+SGVPSVLHPGA +LAVG+QSPPIF LYWDK+AQFSLQ +WDS+LLLCHRIK+AYGGIVRG+HLGSSAL ILP+LD +
Sbjct: 17 KFAVYQNPALSAALTTNSLRPSASTFLCILSIFAASAFALLSVIARENGFIDSFKLGFISSNVAYYFTKAIQTMLGSIFVGTMLALVKAISLWKARDSAGIGAMSPSKGTKEQTLLTNRQLGLLGIRPKAEKAVTEPLKKPSKTKLGLAPSEDVLVPLHQPVTSSNRSSQLSSGKSNTTSGSKTHSFSTPSRSSGSPSPLYL-VPAAGSQLPSAQTPPGFDQLVSTPWSSKRASSAKGITTEEELEQFLADVGERIFESAGKLATPPPTISGFGIASPNTIATSGNSSGTTRSTPLRPVRMSPGSQKFSTPPKKREGDLPPPMSVEESIRAFENVGIYPQIEQWRDRLRQWFSSVLLNPLLNKIDTSHMQVMQEAAKLGISVTVSKVGNDLPTTGTTATVSPVQRPNEWQPAITLDEDSLLHQLRATLVQALDTSTAKFSLGNMKQSSQQNSMIPIMQDCLDAITEHQRLHALMKGEWSKGLLPQSSVREDYTVQRIREFAEGTCLKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHVDSSSYAGSQSSKNPLFLGVLPPKDRFPEKYVAVISGVPSVLHPGACILAVGRQSPPIFTLYWDKRAQFSLQGRTALWDSILLLCHRIKVAYGGIVRGMHLGSSALGILPVLDPE 682
BLAST of DCAR_018827 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6U7H4 ((transmembrane protein 209-like {ECO:0000313|RefSeq:XP_027086543.1}))
HSP 1 Score: 950.658 bits (2456), Expect = 0.000e+0
Identity = 460/670 (68.66%), Postives = 553/670 (82.54%), Query Frame = 0
Match: A0A6P6U7H4 ((transmembrane protein 209-like {ECO:0000313|RefSeq:XP_027086543.1}))
HSP 1 Score: 950.658 bits (2456), Expect = 0.000e+0
Identity = 460/670 (68.66%), Postives = 553/670 (82.54%), Query Frame = 0
Query: 6 KFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQA--TMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 673
KF VY+NPALSAAL + S RPS FLVIL+LS+ASA +L T RE G+ D L+L Q V+ +F K IQ + L+L G ++A KA+S+W+++ VT+ S SKG +EQ+HLT RQLGL+G++P+ E +SSKK K+K+++ PS L+PLHQP+ + SR DKS+ S G+K H+FS+ +KS +S SL+L VPT +QS V NSPG D+L+A+PWSNKRA+S KEITTE+E E+FLAD+DEKISESASKLATPP T +GF A+P I SS NTSGTTRSTPLRPVRMSPGSQKFSTPPKKGE DLPPPMS+EESI+A+EHLGIYP+IE+WRDRLRQWFSSVLLNPLL+KI++SH++VMQAAAKL +++TI+QVG+D PS GT SP+KRTN+WQPA++VDE+GLL QLR LVQALDA +PKLP+GN Q+SPQQNS +PILQECIDAITEHQRLH LM+GEW KGLLP SSVRADY VQRI+ELAEG+CVKNYEYLG+GEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHP+WMLHVDPT YAG+QSSKNPLFLG+LPPK+RFPEKY+AVVS PS+LHPGA +LAVGKQSPPIF LYWDKK QFSLQ +WDS+LLLC++IK +YG IVRG+HLGSSAL ILP+ + N
Sbjct: 14 KFTVYQNPALSAALTSKSRRPSVSTFLVILALSSASAVALFTATCREKGLADILRLRNVPQDVSSVFVKVIQTITSLLLFGTVVAFIKAISIWKVRDAAEVTILSSSKGKEEQLHLTTRQLGLIGVKPKVEPAVVDSSKKPPKSKNASASPSQTLVPLHQPIPAPGYSSRVRGDKSSMSSGNKMHAFSSSSKSPSSPSLYL--VPTASSQS-PVQNSPGSDKLLANPWSNKRATSHKEITTEQELEKFLADVDEKISESASKLATPPATINGFSRASPTPIVSSANTSGTTRSTPLRPVRMSPGSQKFSTPPKKGESDLPPPMSIEESIEAFEHLGIYPEIEQWRDRLRQWFSSVLLNPLLTKIDSSHVRVMQAAAKLGVTITITQVGSDTPSKGTMATLSPVKRTNEWQPAIAVDEDGLLQQLRTTLVQALDACLPKLPLGNIQRSPQQNSLVPILQECIDAITEHQRLHTLMKGEWGKGLLPQSSVRADYTVQRIRELAEGTCVKNYEYLGNGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPSWMLHVDPTSYAGSQSSKNPLFLGVLPPKDRFPEKYIAVVSCFPSILHPGACILAVGKQSPPIFVLYWDKKPQFSLQGRTALWDSILLLCYKIKTSYGDIVRGMHLGSSALRILPVFHAETVN 680
BLAST of DCAR_018827 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4EJH2 ((transmembrane protein 209 {ECO:0000313|RefSeq:XP_018819545.1}))
HSP 1 Score: 947.577 bits (2448), Expect = 0.000e+0
Identity = 458/670 (68.36%), Postives = 553/670 (82.54%), Query Frame = 0
Match: A0A2I4EJH2 ((transmembrane protein 209 {ECO:0000313|RefSeq:XP_018819545.1}))
HSP 1 Score: 947.577 bits (2448), Expect = 0.000e+0
Identity = 458/670 (68.36%), Postives = 553/670 (82.54%), Query Frame = 0
Query: 6 KFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQA--TMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 673
KF+VY+N ALS+AL T SLRPS Y+ L I + S+ASAF+LLT+I+RENG ID LK Q VAYLF KAIQ V+GL+ G + AL KA+SL R + T V V S SKG +Q HLT QLGLLGI+ + EQV SE+SKK K++ P S L+PLHQPM+S +R SR +D+SNSSGG++ S TP+KS +S S + VP +Q SV NSPG D LV++PWSNKRASS KEIT+EE+ E+FLA+I+EKI+ESA KL+TPPPT SGF +A+PNT+SSS NTSGTTRSTPLRPVRMSPGSQKFST PKKGEGDLPPPMS+EESI+A++HLGIYP IE+WRD LRQWFSSVL+NPLL KIE SH++VMQAAA++ IS+TISQVG+DLP++G PI RT DWQPA ++DE+G+LHQLRA LVQA+DAS+ KLP+ N QQ PQQN IP++Q+C+DAITE+Q+LHALM+GE VKGLLP S++ADY+VQRI+ELAEG+C+K+YEYLGSGEVYDK NKKWTLELPTDSHLLLYLFCAFLEHP WMLHVDPT ++G QS K+PLFLG+LPPKERFPEKY+AV+SGVPSVLHPGAS+L VG+QSPPIFALYWDKK QFSLQ +WDS+LL CHRIK+ +GGIVRG+HLGSSAL ILP+LD + ++
Sbjct: 19 KFSVYQNEALSSALTTKSLRPSNYSLLCIFTFSSASAFALLTVISRENGFIDSLKFKNVPQAVAYLFAKAIQTVVGLVFFGTIFALVKAISLRRARNTADVPVLSSSKGNKDQTHLTKHQLGLLGIKSKVEQVVSETSKKPPKSRPHLTPSSDILVPLHQPMISPNRSSRTITDRSNSSGGNRMRSVGTPSKSPSSSSSLYL-VPGGVSQLSSVQNSPGVDSLVSTPWSNKRASSGKEITSEEKLEKFLAEIEEKITESAGKLSTPPPTISGFRIASPNTVSSSANTSGTTRSTPLRPVRMSPGSQKFSTSPKKGEGDLPPPMSLEESIEAFQHLGIYPHIEQWRDHLRQWFSSVLINPLLKKIETSHLQVMQAAARIGISMTISQVGSDLPTAGIPATMFPIDRTKDWQPAFTLDEDGILHQLRATLVQAIDASLLKLPLANLQQPPQQNPLIPVMQQCVDAITEYQKLHALMKGELVKGLLPQISIQADYIVQRIQELAEGTCLKSYEYLGSGEVYDKKNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHVDPTSHSGVQSIKDPLFLGVLPPKERFPEKYVAVISGVPSVLHPGASVLVVGRQSPPIFALYWDKKLQFSLQGRTALWDSILLFCHRIKVGHGGIVRGIHLGSSALSILPVLDLETDD 687
BLAST of DCAR_018827 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7FRI8 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5930953.1}))
HSP 1 Score: 946.421 bits (2445), Expect = 0.000e+0
Identity = 464/631 (73.53%), Postives = 527/631 (83.52%), Query Frame = 0
Match: A0A7J7FRI8 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5930953.1}))
HSP 1 Score: 946.421 bits (2445), Expect = 0.000e+0
Identity = 464/631 (73.53%), Postives = 527/631 (83.52%), Query Frame = 0
Query: 3 KGVKFAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPI-KRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQATM 632
K KFAVY+NPALSAA+ T SLRP+K FL ILSLSTASAF+LL+ RENG+ID LKLGF S VAYLF KAIQI+LG +G M A KA+SLWR + G+ V SPSKG EQ LTNRQLGLLGIR S+ +E +K KTK ++ + L+PLHQP+ SS+R S+ S KSN+S GSK HSFSTP+K + S SL + VP +Q S SPG DQLVA+PW NKRAS KEITTEEE EQFLAD+ EKISESA K+ATPPPT SGFG+A+PN I+SS NTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESI+A+E LGI+PQIE WRDR+RQWFSSVLLNPLL+KIE SH++VMQAAAKL IS+TIS+VG+DLP++GT SPI +R NDW+PA +DE+GLLHQLRA LVQALDASMPKLP+GN QQSPQQN+ IPI+QECIDAITEHQRLHALM+GEW KGLLP SSVRAD+ VQRI+ELAEG+C+KNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHP WMLHVDPT AGAQSSKNPLFLG+LPPKERFPEKY+A +SGVP VLHPGA +LA+G+QSPPIFALYWDKK QFSLQA +
Sbjct: 19 KPSKFAVYQNPALSAAMSTNSLRPTKPTFLCILSLSTASAFALLSFSARENGLIDSLKLGFISPDVAYLFAKAIQIMLGSFFVGTMFAFIKAISLWRARNAAGIAVISPSKGTKEQTLLTNRQLGLLGIR--SKVAVTEPLRKPPKTKFNSASTADVLVPLHQPVTSSNRSSQLSGGKSNTSSGSKIHSFSTPSKPSGSPSLLYL-VPAASSQLPSAQTSPGFDQLVATPWLNKRASFNKEITTEEELEQFLADVGEKISESAGKMATPPPTISGFGMASPNAIASSANTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIEAFERLGIFPQIELWRDRIRQWFSSVLLNPLLNKIETSHMQVMQAAAKLGISITISKVGSDLPTTGTPATVSPIERRPNDWKPAFDLDEDGLLHQLRATLVQALDASMPKLPLGNLQQSPQQNTMIPIVQECIDAITEHQRLHALMKGEWAKGLLPQSSVRADFTVQRIRELAEGTCLKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHVDPTSSAGAQSSKNPLFLGVLPPKERFPEKYVAAISGVPHVLHPGACILAIGRQSPPIFALYWDKKPQFSLQAKL 646
BLAST of DCAR_018827 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A660KU51 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8038885.1}))
HSP 1 Score: 941.799 bits (2433), Expect = 0.000e+0
Identity = 470/669 (70.25%), Postives = 549/669 (82.06%), Query Frame = 0
Match: A0A660KU51 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8038885.1}))
HSP 1 Score: 941.799 bits (2433), Expect = 0.000e+0
Identity = 470/669 (70.25%), Postives = 549/669 (82.06%), Query Frame = 0
Query: 7 FAVYRNPALSAALDTTSLRPSKYAFLVILSLSTASAFSLLTLITRENGIIDGLKLGFFSQGVAYLFTKAIQIVLGLILMGAMIALAKAVSLWRIKITTGVTVNSPSKGLDEQMHLTNRQLGLLGIRPRSEQVASESSKKLSKTKSSTVPPSSPLIPLHQPMVSSSRLSRGSSDKSNSSGGSKFHSFSTPTKSTASQSLFLMNVPTTPTQSLSVSNSPGPDQLVASPWSNKRASSTKEITTEEEFEQFLADIDEKISESASKLATPPPTSSGFGVATPNTISSSTNTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEESIQAYEHLGIYPQIEEWRDRLRQWFSSVLLNPLLSKIENSHIKVMQAAAKLNISVTISQVGTDLPSSGTTTAASPIKRTNDWQPALSVDEEGLLHQLRAALVQALDASMPKLPIGNFQQSPQQNSSIPILQECIDAITEHQRLHALMRGEWVKGLLPHSSVRADYVVQRIKELAEGSCVKNYEYLGSGEVYDKVNKKWTLELPTDSHLLLYLFCAFLEHPNWMLHVDPTPYAGAQSSKNPLFLGILPPKERFPEKYLAVVSGVPSVLHPGASLLAVGKQSPPIFALYWDKKAQFSLQA--TMWDSMLLLCHRIKIAYGGIVRGVHLGSSALDILPILDEDDEN 673
F+VY+N ALSAAL SL+PSK L S S+ SAF+LLTLI+ EN ID LK Q AYL KA+Q V+GL+ G + +L KA+SL R + TGV+V S KG +Q LTNRQLGLLGI+P+ EQV SESSKK K++ P S L+PLH PM S SR SR S+D+SNSSGGS+ H+ STP+KS +S S + +Q S+ +SPG D +V++PWSNKR SS KEIT+EE+ EQFLA++DEKI+ESA KLATPPPT SGFG+A+PNT++SS NTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEE+ +A+EHLGIYPQIE+WRD LRQWFSSVLLNPLL KIE SHI+VMQAAA+L IS+TISQVG+DLP++GT SPI R+ DWQPA ++DE+G+LH+LRA LVQA+D SMPKLP+ N QQSPQQN IPI+QEC+DAITEHQRLHALM+GEWVKGLLP S VRA+Y VQRI+ELA G+C+KNYEYLGSGEVYDK NKKWTLELPTDSHLLLYLFCAFLEHP WMLHVDPT Y GAQSSKNPLFLG+LPPKERFPE Y+AV+SGVPS LHPGAS+L VG++SPP FALYWDKKAQFSLQ +WDS+LLLCHRIKI YGGIVRG+HLGSSAL ILP+LD + E+
Sbjct: 20 FSVYQNAALSAALTAKSLQPSKCTLLCAFSFSSVSAFALLTLISWENCFIDNLKFRGLPQETAYLIAKALQTVVGLVFFGTVFSLFKAISLHRARNVTGVSVLSSGKGNKDQTCLTNRQLGLLGIKPKVEQVTSESSKKPPKSR----PHSDVLVPLHPPMTSPSRSSRTSADRSNSSGGSRRHAVSTPSKSPSSLSSLYLVPGAV-SQLPSLQSSPGLDSMVSTPWSNKRPSSGKEITSEEKLEQFLAEVDEKITESAGKLATPPPTISGFGIASPNTVASSANTSGTTRSTPLRPVRMSPGSQKFSTPPKKGEGDLPPPMSMEEATEAFEHLGIYPQIEQWRDHLRQWFSSVLLNPLLKKIETSHIQVMQAAARLGISITISQVGSDLPTTGTPATVSPIDRSKDWQPAFTLDEDGILHRLRATLVQAIDTSMPKLPLANLQQSPQQNPLIPIMQECVDAITEHQRLHALMKGEWVKGLLPQSGVRANYTVQRIRELAGGTCLKNYEYLGSGEVYDKKNKKWTLELPTDSHLLLYLFCAFLEHPKWMLHVDPTSYIGAQSSKNPLFLGVLPPKERFPEHYVAVISGVPSALHPGASILVVGRKSPPSFALYWDKKAQFSLQGRTALWDSILLLCHRIKIGYGGIVRGMHLGSSALSILPVLDSETED 683
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7BZM2 | E-Value: 0.000e+0, PID: 75.71 | (Uncharacterized protein {ECO:0000313|EMBL:MPA7344... [more] |
| A0A5J5BLL7 | E-Value: 0.000e+0, PID: 73.11 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8544... [more] |
| A0A7N2KNB9 | E-Value: 0.000e+0, PID: 70.00 | (Uncharacterized protein {ECO:0000313|EnsemblPlant... [more] |
| A0A068UHN9 | E-Value: 0.000e+0, PID: 69.16 | (Uncharacterized protein {ECO:0000313|EMBL:CDP0714... [more] |
| A0A4S4F2M9 | E-Value: 0.000e+0, PID: 67.41 | (Uncharacterized protein {ECO:0000313|EMBL:THG2316... [more] |
| A0A2R6PF21 | E-Value: 0.000e+0, PID: 71.21 | (Transmembrane protein {ECO:0000313|EMBL:PSR89985.... [more] |
| A0A6P6U7H4 | E-Value: 0.000e+0, PID: 68.66 | (transmembrane protein 209-like {ECO:0000313|RefSe... [more] |
| A0A2I4EJH2 | E-Value: 0.000e+0, PID: 68.36 | (transmembrane protein 209 {ECO:0000313|RefSeq:XP_... [more] |
| A0A7J7FRI8 | E-Value: 0.000e+0, PID: 73.53 | (Uncharacterized protein {ECO:0000313|EMBL:KAF5930... [more] |
| A0A660KU51 | E-Value: 0.000e+0, PID: 70.25 | (Uncharacterized protein {ECO:0000313|EMBL:KAE8038... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |