Resource Type:
Polypeptide
Name:
DCAR_019406
Identifier:
DCAR_019406.mRNA-protein
Sequence:
MQQADPTVLSLRPGGGNRGGKTIGSRFDSSSSVFASADLPVFRPHGGSFP
IKTGDSRFEGRERIRFTRDQLLQLREYLGYLSKNLIQIEQSDPNIYSNPD
AVNITDEILKVKQVVEAEFFIEAQNWGHGESNPPVPQSQPQSRYSEPDSR
DWRGRSAQVPSSVEERSWIGDRESGGRLDSRQQDSNQYNRQDQLNSQFGR
GQYSSNQGGAPPTLVKAEVPWSVQRGNLSEKDRVLKTVKGILNKLTPEKF
DILKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAELCSDLNEKL
PPFPSDEPGGREITFKRVLLNNCQEAFEGADKLRAELREMTAPEQELERR
DKERMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADNKICPEEE
NVEAICHFFNTIGKQLDESPKSRRINDVYFLRLKDLSTNPQLAPRMRFMV
RDIIDLRSNNWVPRREEVKAKTITEIHNEAEKTMKLRPGSTASIRNSRGM
PSAAQGGMTAGGFPIHRPGTGGMMPGMPGARKMPGMPGIDNDNWEVTRSR
TMPRNDSSQPVGRVQPPFIGKSAVSNPRLLPQGSGGLISGRSSALLQGSS
STQVRPNYGIGFESPRQDPSPVRQIPTVSMPPVAAKPTTSSVRLNPEELR
RKTISLLEEYFSVRILDEALQCVEELKSPGYHAELVKEAISLALEKIPPC
VEPVAKLLEYLSVKKVLTAIDIQGGCLLYGSNLDDIGIDLPKAPNNFGEI
MGKLILAGQLDFKVVEEVLKKMEDNMFQKHVLSAALGTVTSSPSGQAFLD
SQAASIEACKSLF*
Sequence Length:
814
Sequence Checksum:
e690dbc380c15b0d055f7d07b0a2e123
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_019406, derives from mRNA, DCAR_019406. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_019406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_019406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A5BU43 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1161.75 bits (3004), Expect = 0.000e+0
Identity = 592/829 (71.41%), Postives = 662/829 (79.86%), Query Frame = 0
Match: A5BU43 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1161.75 bits (3004), Expect = 0.000e+0
Identity = 592/829 (71.41%), Postives = 662/829 (79.86%), Query Frame = 0
Query: 3 QADPTVLSLRPGG-------GNRGGKTIGSRFDSSSSVFASA--DLPVFRPHGG---SFPIKTGDSRFEGRERIRFTRDQLLQLREYLGYLSKNLIQIEQSDPNIYSNPDAVNITDEILKVKQVVEAEFFIEAQNWGHGESNPPVPQSQPQSRYSEPDSRDWRGRSAQVPSSVEERSWIGDRESGGRLDSRQQDSNQYNRQDQLNSQFGRGQYSSNQGGAPPTLVKAEVPWSVQRGNLSEKDRVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAELCSDLNEKLPPFPSDEPGGREITFKRVLLNNCQEAFEGADKLRAELREMTAPEQELERRDKERMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADNKICPEEENVEAICHFFNTIGKQLDESPKSRRINDVYFLRLKDLSTNPQLAPRMRFMVRDIIDLRSNNWVPRREEVKAKTITEIHNEAEKTMKLRPGSTASIRNSRGMPSAAQGGMTAGGFPIHRPGTGGMMPGMPGARKMPGMPGIDNDNWEVTRSRTMPRNDSSQPVGR-----VQPPFIGKSAVSNPRLLPQGSGGLISGRSSALLQGSSSTQVR-PNYGIGFESPRQDPSPVRQIPTVSMPPVAAKPTTSSVRLNPEELRRKTISLLEEYFSVRILDEALQCVEELKSPGYHAELVKEAISLALEKIPPCVEPVAKLLEYLSVKKVLTAIDIQGGCLLYGSNLDDIGIDLPKAPNNFGEIMGKLILAGQLDFKVVEEVLKKMEDNMFQKHVLSAALGTVTSSPSGQAFLDSQAASIEACKSLF 813
QAD TVLSLRPGG NRG + +G RFDSSSS + DLPV RPHGG SF IK GDSRFEGRER+RFTRD+LLQLRE V++ ++ILK+KQ +EAE F E QNWG GESN P +Q QSRYSEPD+RDWRGRSAQ+P+S EERSW DSRQQ++NQ+NRQDQLNSQF + Q SS QGG P LVKAEVPWS +R NLSEK+RVLKTVKGILNKLTPEKFD+LKGQLIDSGIT+ADILKGVISLIFDKAVLEPTFCPMYA LCSDLNEKLPPFPSDEPGG+EITFKRVLLNNCQEAFEG+DKLRAE+R+MTAPEQELERRDKERM+KLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLG DNK CP+EENVEAIC FFNTIGKQLDES KSRRIND+YF RLK+L+TNPQLAPR+RFMVRD++DLR+N+WVPRREEVKAKTITEIH EAEK + LRPG+TASIRNSR + S AQG M GGFPI RPG+GGMMPGMPG RKMPGMPGIDNDNWEV R+R MPR D S R VQ P +GKS N RLLPQGS G ISGR+SALLQGS R N+G+G E Q P P + +P S+ P A KP T + RLN ++LRRKT+SLLEEYF VRILDEALQCVEELKSP YH E+VKEAISLALEK PPCV+PVAKLLE+L KKVLT +DI GCL+YGS LDDIGIDLPKAPN+FGE++G L+LAG LDFKVV E++KK+ED+ FQK + A + V+SSPSGQ LDSQAA I AC+SL
Sbjct: 2 QADQTVLSLRPGGGGGGGGGANRGSRFLGPRFDSSSSSPFGSSSDLPVLRPHGGAPSSFSIKAGDSRFEGRERVRFTRDKLLQLRE------------------------VVDVPEDILKIKQEIEAELFGEDQNWGRGESNLP---NQSQSRYSEPDNRDWRGRSAQLPASGEERSW---------FDSRQQEANQFNRQDQLNSQFAKAQISSVQGGPAPALVKAEVPWSARRVNLSEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGSDKLRAEIRQMTAPEQELERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGHDNKSCPDEENVEAICQFFNTIGKQLDESTKSRRINDMYFSRLKELTTNPQLAPRLRFMVRDVLDLRANSWVPRREEVKAKTITEIHTEAEKNLGLRPGATASIRNSRNIVSGAQGTMGPGGFPITRPGSGGMMPGMPGTRKMPGMPGIDNDNWEVPRTRAMPRGDGSGVQTRVQQTHVQSPLMGKSMPLNSRLLPQGSAGFISGRTSALLQGSGPPPARTANFGLGMEPALQSPVPAKSVPVASIVPAAEKPVTPAARLNSDDLRRKTVSLLEEYFGVRILDEALQCVEELKSPAYHPEVVKEAISLALEKSPPCVDPVAKLLEFLFSKKVLTTMDIGTGCLMYGSMLDDIGIDLPKAPNSFGEVIGNLVLAGALDFKVVTEIMKKVEDDRFQKMIFDAVMRIVSSSPSGQGVLDSQAADIAACQSLL 794
BLAST of DCAR_019406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6HYK5 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1159.05 bits (2997), Expect = 0.000e+0
Identity = 591/829 (71.29%), Postives = 661/829 (79.73%), Query Frame = 0
Match: F6HYK5 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1159.05 bits (2997), Expect = 0.000e+0
Identity = 591/829 (71.29%), Postives = 661/829 (79.73%), Query Frame = 0
Query: 3 QADPTVLSLRPGG-------GNRGGKTIGSRFDSSSSVFASA--DLPVFRPHGG---SFPIKTGDSRFEGRERIRFTRDQLLQLREYLGYLSKNLIQIEQSDPNIYSNPDAVNITDEILKVKQVVEAEFFIEAQNWGHGESNPPVPQSQPQSRYSEPDSRDWRGRSAQVPSSVEERSWIGDRESGGRLDSRQQDSNQYNRQDQLNSQFGRGQYSSNQGGAPPTLVKAEVPWSVQRGNLSEKDRVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAELCSDLNEKLPPFPSDEPGGREITFKRVLLNNCQEAFEGADKLRAELREMTAPEQELERRDKERMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADNKICPEEENVEAICHFFNTIGKQLDESPKSRRINDVYFLRLKDLSTNPQLAPRMRFMVRDIIDLRSNNWVPRREEVKAKTITEIHNEAEKTMKLRPGSTASIRNSRGMPSAAQGGMTAGGFPIHRPGTGGMMPGMPGARKMPGMPGIDNDNWEVTRSRTMPRNDSSQPVGR-----VQPPFIGKSAVSNPRLLPQGSGGLISGRSSALLQGSSSTQVR-PNYGIGFESPRQDPSPVRQIPTVSMPPVAAKPTTSSVRLNPEELRRKTISLLEEYFSVRILDEALQCVEELKSPGYHAELVKEAISLALEKIPPCVEPVAKLLEYLSVKKVLTAIDIQGGCLLYGSNLDDIGIDLPKAPNNFGEIMGKLILAGQLDFKVVEEVLKKMEDNMFQKHVLSAALGTVTSSPSGQAFLDSQAASIEACKSLF 813
QAD TVLSLRPGG NRG + +G RFDSSSS + DLPV RPHGG SF IK GDSRFEGRER+RFTRD+LLQLRE V++ ++ILK+KQ +EAE F E QNWG GESN P +Q QSRYSEPD+RDWRGRSAQ+P+S EERSW DSRQQ++NQ+NRQDQLNSQF + Q SS GG P LVKAEVPWS +R NLSEK+RVLKTVKGILNKLTPEKFD+LKGQLIDSGIT+ADILKGVISLIFDKAVLEPTFCPMYA LCSDLNEKLPPFPSDEPGG+EITFKRVLLNNCQEAFEG+DKLRAE+R+MTAPEQELERRDKERM+KLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLG DNK CP+EENVEAIC FFNTIGKQLDES KSRRIND+YF RLK+L+TNPQLAPR+RFMVRD++DLR+N+WVPRREEVKAKTITEIH EAEK + LRPG+TASIRNSR + S AQG M GGFPI RPG+GGMMPGMPG RKMPGMPGIDNDNWEV R+R MPR D S R VQ P +GKS N RLLPQGS G ISGR+SALLQGS R N+G+G E Q P P + +P S+ P A KP T + RLN ++LRRKT+SLLEEYF VRILDEALQCVEELKSP YH E+VKEAISLALEK PPCV+PVAKLLE+L KKVLT +DI GCL+YGS LDDIGIDLPKAPN+FGE++G L+LAG LDFKVV E++KK+ED+ FQK + A + V+SSPSGQ LDSQAA I AC+SL
Sbjct: 2 QADQTVLSLRPGGGGGGGGGANRGSRFLGPRFDSSSSSPFGSSSDLPVLRPHGGAPSSFSIKAGDSRFEGRERVRFTRDKLLQLRE------------------------VVDVPEDILKIKQEIEAELFGEDQNWGRGESNLP---NQSQSRYSEPDNRDWRGRSAQLPASGEERSW---------FDSRQQEANQFNRQDQLNSQFAKAQISSVLGGPAPALVKAEVPWSARRVNLSEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGSDKLRAEIRQMTAPEQELERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGHDNKSCPDEENVEAICQFFNTIGKQLDESTKSRRINDMYFSRLKELTTNPQLAPRLRFMVRDVLDLRANSWVPRREEVKAKTITEIHTEAEKNLGLRPGATASIRNSRNIVSGAQGTMGPGGFPITRPGSGGMMPGMPGTRKMPGMPGIDNDNWEVPRTRAMPRGDGSGVQTRVQQTHVQSPLMGKSMPLNSRLLPQGSAGFISGRTSALLQGSGPPPARTANFGLGMEPALQSPVPAKSVPVASIVPAAEKPVTPAARLNSDDLRRKTVSLLEEYFGVRILDEALQCVEELKSPAYHPEVVKEAISLALEKSPPCVDPVAKLLEFLFSKKVLTTMDIGTGCLMYGSMLDDIGIDLPKAPNSFGEVIGNLVLAGALDFKVVTEIMKKVEDDRFQKMIFDAVMRIVSSSPSGQGVLDSQAADIAACQSLL 794
BLAST of DCAR_019406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AAC4 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1157.13 bits (2992), Expect = 0.000e+0
Identity = 602/825 (72.97%), Postives = 676/825 (81.94%), Query Frame = 0
Match: A0A5B7AAC4 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1157.13 bits (2992), Expect = 0.000e+0
Identity = 602/825 (72.97%), Postives = 676/825 (81.94%), Query Frame = 0
Query: 3 QADPTVLSLRPGGGNRGGKTIG--SRFDSSSSVFASA-DLPVFRPHGG---SFPIKTGDSRFEGRERIRFTRDQLLQLREYLGYLSKNLIQIEQSDPNIYSNPDAVNITDEILKVKQVVEAEFFIEAQNWGHGESNPPVPQSQPQSRYSEPDSRDWRGRSAQVPSSVEERSWIG---DRESGGRLDSRQQDSNQYNRQDQLNSQFGRGQYSSNQG-GAPPTLVKAEVPWSVQRGNLSEKDRVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAELCSDLNEKLPPFPSDEPGGREITFKRVLLNNCQEAFEGADKLRAELREMTAPEQELERRDKERMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADNKICPEEENVEAICHFFNTIGKQLDESPKSRRINDVYFLRLKDLSTNPQLAPRMRFMVRDIIDLRSNNWVPRREEVKAKTITEIHNEAEKTMKLRPGSTASIRNSRGMPSAAQGGMTAGGFPIHRPGTGGMMPGMPGARKMPGMPGIDNDNWEVTRSRTMPRNDSS--QPVGRV-QPPFIGKSAVSNPRLLPQGSGGLISGRSSALLQGSSSTQVR-PNYGIGFESPRQDPSPVRQIPTVSMPPVAAKPTTSSVRLNPEELRRKTISLLEEYFSVRILDEALQCVEELKSPGYHAELVKEAISLALEKIPPCVEPVAKLLEYLSVKKVLTAIDIQGGCLLYGSNLDDIGIDLPKAPNNFGEIMGKLILAGQLDFKVVEEVLKKMEDNMFQKHVLSAALGTVTSSPSGQAFLDSQAASIEACKSLF 813
QAD TVLSLRPGGG SRF+SS+ + + DLPV RPHGG SF IKT DSRFE RER+++TRDQLLQL E VNIT++ILK+KQ VEAEFF E Q WG ESN Q+Q Q+RYSEPD+RDWRGRSAQ P+S EERSW +RE GGR DS+Q D+ QYNRQDQLNSQF R Q SSNQG G+ L+KAEVPWS +RGNLSEK+RVLKTVKGILNKLTPEKFD+LKGQLIDSGIT+ADILKGVISLIFDKAVLEPTFCPMYA LCSDLNEKLPPFPS+EPGG+EITFKRVLLNNCQEAFEG+D+L+AE+R+MTAPEQELERRDKERM+KLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLG D+K CPEEENVEAIC FFNTIGKQLDESPKSRRIND YF RLK+LSTNPQLAPR+RFMVR+++DLR+NNWVPRREEVKAKTI+EIH EAEK + LRPG+TASIRNSRG+ S QG ++ GGFPI+RPG+GGMMPGMPG RKMPGMPGIDNDNWEV RSR++PR D+S QP GRV QPP IGKS N +LLPQGSGG+ISGR+SALLQGS + VR N G + Q P+P + +P S PVA KP + RL+P+ELRRKT+SLLEEYFSVRILDEALQC+EELKSPGYH E+VKEAISLALEK PPCVEPVAKLLEYL KKVL A DI GCLLYGS LDDIGIDLPKAPNNFGE++GKLILAG LDF VV+EVLKK+ED+ FQK + +A + +TSSPSGQ LDSQA+ IEAC+SLF
Sbjct: 2 QADQTVLSLRPGGGGGNRGGRVLGSRFESSAFGSSLSSDLPVLRPHGGAPPSFSIKTADSRFESRERVQYTRDQLLQLGE------------------------VVNITEDILKIKQEVEAEFFGEDQTWGRAESNL---QNQSQNRYSEPDNRDWRGRSAQFPTSGEERSWETIRENREFGGRFDSKQ-DTIQYNRQDQLNSQFARAQISSNQGVGSTTALIKAEVPWSARRGNLSEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSEEPGGKEITFKRVLLNNCQEAFEGSDQLKAEMRQMTAPEQELERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGHDSKTCPEEENVEAICQFFNTIGKQLDESPKSRRINDGYFNRLKELSTNPQLAPRLRFMVRNVLDLRANNWVPRREEVKAKTISEIHTEAEKNLGLRPGATASIRNSRGIVSGGQGSISPGGFPINRPGSGGMMPGMPGTRKMPGMPGIDNDNWEVPRSRSIPRGDASTIQPTGRVLQPPLIGKSPSLNSKLLPQGSGGIISGRTSALLQGSGAPPVRMHNLSFGMDPASQVPAPAKPVPIASTLPVAEKP-VAPARLSPDELRRKTVSLLEEYFSVRILDEALQCMEELKSPGYHPEVVKEAISLALEKNPPCVEPVAKLLEYLFAKKVLAAGDIGTGCLLYGSTLDDIGIDLPKAPNNFGEVIGKLILAGGLDFNVVKEVLKKVEDDRFQKDIFAAVMTILTSSPSGQGILDSQASDIEACESLF 797
BLAST of DCAR_019406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A067KR86 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1149.42 bits (2972), Expect = 0.000e+0
Identity = 589/833 (70.71%), Postives = 668/833 (80.19%), Query Frame = 0
Match: A0A067KR86 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1149.42 bits (2972), Expect = 0.000e+0
Identity = 589/833 (70.71%), Postives = 668/833 (80.19%), Query Frame = 0
Query: 1 MQQADPTVLSLRPGGGNRGGKTIGSRFDSSSSV-----------FASADLPVFRPHGGSFPIKTGDSRFEGRERIRFTRDQLLQLREYLGYLSKNLIQIEQSDPNIYSNPDAVNITDEILKVKQVVEAEFFIEAQNWGHGESNPPVPQSQPQSRYSEPDSRDWRGRSAQVPSSVEERSWIGDRESG---GRLDSRQQDSNQYNRQDQLNSQFGRGQYSSNQGGAP-PTLVKAEVPWSVQRGNLSEKDRVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAELCSDLNEKLPPFPSDEPGGREITFKRVLLNNCQEAFEGADKLRAELREMTAPEQELERRDKERMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADNKICPEEENVEAICHFFNTIGKQLDESPKSRRINDVYFLRLKDLSTNPQLAPRMRFMVRDIIDLRSNNWVPRREEVKAKTITEIHNEAEKTMKLRPGSTASIRNSRGMPSAAQGGMTAGGFPIHRPGTGGMMPGMPGARKMPGMPGIDNDNWEVTRSRTMPRNDSS---QPVGRVQPPFIGKSAVSNPRLLPQGSGGLISGRSSALLQGSSSTQVRPNYGIGFESPRQDPSPVRQIP--TVSMPPVAAKPTTSSVRLNPEELRRKTISLLEEYFSVRILDEALQCVEELKSPGYHAELVKEAISLALEKIPPCVEPVAKLLEYLSVKKVLTAIDIQGGCLLYGSNLDDIGIDLPKAPNNFGEIMGKLILAGQLDFKVVEEVLKKMEDNMFQKHVLSAALGTVTSSPSGQAFLDSQAASIEACKSLF 813
MQQAD TVLSLRPGGG RG + R +SSSS A DLP+ RPHGG+ +KTGDSRFE RER+R+TRDQLLQLRE AV I+DEILK+K+ EAE F E Q+W GESNPPV QPQSRYSEPD+RDWRGR+ Q S EERSW RE+ GR DSRQQ++NQ++RQDQLNSQF R Q SSNQ G P P LVKAEVPWS +RGNLSE +RVLKTVKGILNKLTPEKFD+LKGQLIDSGITSADILKGVI L+F+KAVLEPTFCPMYA+LCSDLNEKLPPFPSDEPGG+EITFKRVLLN CQEAFEGADKLR E+R+MTAPEQELERRDKER++KLRTLGNIRLIGELLKQKMVPEKIVHHIV+ELLG DNK+CP EENVEAIC FFNTIGKQLDE PKS+RIND+YF RLK+L++NPQLAPR+RFM+RD++DLRSNNW+PRREEVKAKTITEIH+EAEK + LRPG+T+SIRNSRG+ SAA G GGFPI+RPGTGGMMPGMPG R+MPGMPGIDN+NWEV R+R++PR D + Q GRV P KS N RLLPQGSGG I G+SSALLQGS RP Y +G + +PSP IP T MPPVA KP S+ +NP+EL+RKTISLL+EYF++R+LDEALQCVEELKSP YH E+VKEAISL LE+ PPCVEPVAKLLEYL KKV+TA D+ GCLLYGS LDDIGIDLPKAP+NFGEI+GKL+LAG LDFKVV EVLKKMED+M+QK VL AA+ T+ SP+GQ LDSQA+ IEAC+SL
Sbjct: 1 MQQADQTVLSLRPGGG-RGNRLFNPRLESSSSNNSSSSALSSSSIAFGDLPLLRPHGGA-ALKTGDSRFEVRERVRYTRDQLLQLRE------------------------AVIISDEILKIKREFEAELFGEDQSWSRGESNPPV---QPQSRYSEPDNRDWRGRTPQFSSPGEERSWDSLRENRDLVGRYDSRQQEANQFSRQDQLNSQFARSQISSNQSGGPAPALVKAEVPWSARRGNLSENERVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVIQLVFEKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGADKLREEVRQMTAPEQELERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVKELLGPDNKVCPAEENVEAICQFFNTIGKQLDEGPKSQRINDIYFSRLKELASNPQLAPRLRFMIRDVLDLRSNNWIPRREEVKAKTITEIHSEAEKNLGLRPGATSSIRNSRGVISAAPGTTGPGGFPINRPGTGGMMPGMPGTRRMPGMPGIDNENWEVPRTRSIPRGDGATMQQSTGRVPSPMYNKSTSLNARLLPQGSGGFIGGKSSALLQGSGGPSPRP-YNVGLAT---EPSPQTPIPSKTPYMPPVAEKPVVSAASINPDELQRKTISLLKEYFNIRLLDEALQCVEELKSPAYHPEVVKEAISLGLEENPPCVEPVAKLLEYLFAKKVITAKDVGTGCLLYGSLLDDIGIDLPKAPHNFGEIIGKLVLAGALDFKVVREVLKKMEDDMYQKAVLDAAIRTIGCSPNGQGLLDSQASDIEACQSLL 800
BLAST of DCAR_019406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2C9VMG3 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1133.24 bits (2930), Expect = 0.000e+0
Identity = 582/827 (70.37%), Postives = 662/827 (80.05%), Query Frame = 0
Match: A0A2C9VMG3 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1133.24 bits (2930), Expect = 0.000e+0
Identity = 582/827 (70.37%), Postives = 662/827 (80.05%), Query Frame = 0
Query: 1 MQQADPTVLSLRPGGGNRGGKTIGSRFDSSSSVFAS------ADLPVFRPHGGSFPIKTGDSRFEGRERIRFTRDQLLQLREYLGYLSKNLIQIEQSDPNIYSNPDAVNITDEILKVKQVVEAEFFIEAQNWGHGESNPPVPQSQPQSRYSEPDSRDWRGRSAQVPSSVEERSWIGDRES---GGRLDSRQQDSNQYNRQDQLNSQFGRGQYSSNQGGAP-PTLVKAEVPWSVQRGNLSEKDRVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAELCSDLNEKLPPFPSDEPGGREITFKRVLLNNCQEAFEGADKLRAELREMTAPEQELERRDKERMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADNKICPEEENVEAICHFFNTIGKQLDESPKSRRINDVYFLRLKDLSTNPQLAPRMRFMVRDIIDLRSNNWVPRREEVKAKTITEIHNEAEKTMKLRPGSTASIRNSRGMPSAAQGGMTAGGFPIHRPGTGGMMPGMPGARKMPGMPGIDNDNWEVTRSRTMPRNDSS--QPVGRVQPPFIGKSAVSNPRLLPQGSGGLISGRSSALLQGSSSTQVRPNYGIGF--ESPRQDPSPVRQIPTVSMPPVAAKPTTSSVRLNPEELRRKTISLLEEYFSVRILDEALQCVEELKSPGYHAELVKEAISLALEKIPPCVEPVAKLLEYLSVKKVLTAIDIQGGCLLYGSNLDDIGIDLPKAPNNFGEIMGKLILAGQLDFKVVEEVLKKMEDNMFQKHVLSAALGTVTSSPSGQAFLDSQAASIEACKSLF 813
MQQ D TVLSLRPGGG RG + R +SSSS S DLP+ RPHGG+ P+KTGDSRFE +R+R+TRDQL+QLRE AV I+DEILK+K+ +E E F E Q+WG GE N P +Q QSRYSEPD+RDWRGR+AQ SS EERSW RE+ GGR DSRQ D++Q+NRQDQLNSQF R Q SSNQ G P P LVKAEVPWS ++GNLS+K+RVLKTVKGILNKLTPEKFD+LKGQLIDSGITSADILKGVI LIF+KAVLEPTFCPMYA+LCSDLNEKLPPFPS+EPGG+EITFKRVLLNNCQEAFEGADKLR E+R+MTAPEQELERRDKER++KLRTLGNIRLIGELLKQKMVPEKIVHHIV+ELLG D KICP EENVEAIC FFNTIGKQLDES KS+RIND+YFLR+K+LS+NPQLAPR+RFM+RD++DLR+NNW+PRREEVKAKTITEIH+EAEK + LRPG+T+SIRN+RG+ SAA G G FPI+RPG GGMMPGMPG R+MPGMPG+DNDNWEV ++R+MPR D S Q GRV P KS N RLLPQGSGG I G+SSALLQGSS RP YG+G E P Q P+P + P + P KP S+V LNPEEL RKT+SLL+EYF+ R+LDEALQCVEELKSP YH E+VKEAISLALE+ PPCVE VAKLL YL K V+TA DI GCLLYGS LDDIGIDLPKAPNNFGEI+GKL+LAG LDFKVV+EVLKKMED+ +QK V AA+GTV+ SP+ Q LDSQ + IE CKSLF
Sbjct: 1 MQQGDQTVLSLRPGGG-RGSRLFNPRLESSSSSALSSSSISFGDLPLLRPHGGA-PLKTGDSRFETHDRVRYTRDQLVQLRE------------------------AVVISDEILKIKREIEGELFGEDQSWGRGEINTP---NQSQSRYSEPDNRDWRGRTAQFSSSGEERSWDSLRENRDLGGRYDSRQPDTSQFNRQDQLNSQFARAQISSNQSGGPAPALVKAEVPWSARKGNLSDKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVIQLIFEKAVLEPTFCPMYAQLCSDLNEKLPPFPSEEPGGKEITFKRVLLNNCQEAFEGADKLRQEVRQMTAPEQELERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVKELLGPDTKICPAEENVEAICQFFNTIGKQLDESAKSQRINDIYFLRVKELSSNPQLAPRLRFMIRDVLDLRANNWIPRREEVKAKTITEIHSEAEKNLGLRPGATSSIRNNRGVISAAPGTAGPGVFPINRPGAGGMMPGMPGTRRMPGMPGMDNDNWEVPKTRSMPRGDGSTMQHTGRVSSPMYNKSTSLNTRLLPQGSGGFIGGKSSALLQGSSGPSPRP-YGVGSGNELPAQVPAPAKTSPAPYVAPSVEKPAASAVSLNPEELGRKTVSLLKEYFNARLLDEALQCVEELKSPTYHPEVVKEAISLALEENPPCVELVAKLLGYLLSKNVITARDIGTGCLLYGSLLDDIGIDLPKAPNNFGEIIGKLVLAGGLDFKVVKEVLKKMEDDRYQKAVFDAAMGTVSYSPNPQVILDSQESYIEDCKSLF 797
BLAST of DCAR_019406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A385JIT8 ((Eukaryotic translation initiation factor {ECO:0000313|EMBL:AXY97940.1}))
HSP 1 Score: 1131.7 bits (2926), Expect = 0.000e+0
Identity = 582/822 (70.80%), Postives = 657/822 (79.93%), Query Frame = 0
Match: A0A385JIT8 ((Eukaryotic translation initiation factor {ECO:0000313|EMBL:AXY97940.1}))
HSP 1 Score: 1131.7 bits (2926), Expect = 0.000e+0
Identity = 582/822 (70.80%), Postives = 657/822 (79.93%), Query Frame = 0
Query: 1 MQQADPTVLSLRPGGGNRGGKTIGSRFDSSSSVFAS----ADLPVFRPHGGSFPIKTGDSRFEGRERIRFTRDQLLQLREYLGYLSKNLIQIEQSDPNIYSNPDAVNITDEILKVKQVVEAEFFIEAQNWGHGESNPPVPQSQPQSRYSEPDSRDWRGRSAQVPSSVEERSWIGDRES---GGRLDSRQQDSNQYNRQDQLNSQFGRGQYSSNQGGAPPTLVKAEVPWSVQRGNLSEKDRVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAELCSDLNEKLPPFPSDEPGGREITFKRVLLNNCQEAFEGADKLRAELREMTAPEQELERRDKERMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADNKICPEEENVEAICHFFNTIGKQLDESPKSRRINDVYFLRLKDLSTNPQLAPRMRFMVRDIIDLRSNNWVPRREEVKAKTITEIHNEAEKTMKLRPGSTASIRNSRGMPSAAQGGMTAGGFPIHRPGTGGMMPGMPGARKMPGMPGIDNDNWEVTRSRTMPRNDSS-QPVGRVQPPFIGKSAVSNPRLLPQGSGGLISGRSSALLQGSSSTQVRP-NYGIGFESPRQDPSPVRQIPTVSMPPVAAKPTTSSVRLNPEELRRKTISLLEEYFSVRILDEALQCVEELKSPGYHAELVKEAISLALEKIPPCVEPVAKLLEYLSVKKVLTAIDIQGGCLLYGSNLDDIGIDLPKAPNNFGEIMGKLILAGQLDFKVVEEVLKKMEDNMFQKHVLSAALGTVTSSPSGQAFLDSQAASIEACKSLF 813
MQQ D TVLSLRPGGG RG + R + SSS +S DLP+ RPHGG+ KTGD RFEGRER+R+TRDQLLQLRE AV I DEILK+KQ +EAE F E Q+W GE+NPP +Q Q RYSEPD+RDWRGRSAQ S EERS RE+ GGR DSRQQ+ NQ NRQDQLNSQF R Q SS+QGG P LVKAEVPWS +R NLSEK+RVLKTVKGILNKLTPEKFD+LKGQLIDSGITS DILKGVISLIFDKAVLEPTFCPMYA+LCSDLNEKLP FPSDEPGG+EITFKRVLLN CQEAFEGADKLR ELR+MTAPEQELERRDKE+++KLRTLGN+RLIGELLKQ MVPEKIVHHIVQELLG DNK CP EE+VEAIC FFNTIGKQLDESPKSRRINDVYF RLK+L++NPQLAPR++FMVR ++DLR NNW+PRREEVKAKTITEIH+EAEKT+ LRPG+TASIRN+RG+ S A G GGFPI+RPGTGGMMPGMPG R+MPGMPGIDNDN E+ R+R MPR D Q GRVQ P KS++ N RLLP+GSGG I GRSSALL GS RP N G G E P Q P + +P S+PPV+ +P S+ R+NP+EL+RKT+SLL+EYFSV +LDEALQCVEELKSPGYH E+VKEAI +ALE PPCVEPVAKLLEYL KKVLTA DI GCLLYGS LDDIGIDLPKAPNNFGEI+GKL+L G LDFK+V EVLKKMED+M+++ + AA+ + SSP GQ LD+QA++IEAC+SLF
Sbjct: 1 MQQGDQTVLSLRPGGG-RGSRLFNPRLEQSSSSTSSSISFGDLPLLRPHGGATSFKTGDLRFEGRERVRYTRDQLLQLRE------------------------AVVIFDEILKIKQEIEAELFGEDQSWSRGETNPP---TQSQIRYSEPDNRDWRGRSAQFSPSGEERSRDSIRENRDFGGRYDSRQQEGNQSNRQDQLNSQFARAQISSHQGGPAPALVKAEVPWSTRRVNLSEKERVLKTVKGILNKLTPEKFDVLKGQLIDSGITSTDILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPSFPSDEPGGKEITFKRVLLNICQEAFEGADKLREELRQMTAPEQELERRDKEKLVKLRTLGNMRLIGELLKQSMVPEKIVHHIVQELLGPDNKGCPAEESVEAICQFFNTIGKQLDESPKSRRINDVYFGRLKELASNPQLAPRLKFMVRGVLDLRMNNWIPRREEVKAKTITEIHSEAEKTLGLRPGATASIRNNRGLISTAPGTTGPGGFPINRPGTGGMMPGMPGTRRMPGMPGIDNDNREIPRNRPMPRGDGPMQLGGRVQSPMFNKSSL-NTRLLPEGSGGFIGGRSSALLHGSGGPPSRPSNSGFGAEPPAQASLPSKTLPAPSVPPVSERPVVSAARVNPDELKRKTVSLLKEYFSVLLLDEALQCVEELKSPGYHPEVVKEAIFIALEANPPCVEPVAKLLEYLFSKKVLTAKDIGTGCLLYGSMLDDIGIDLPKAPNNFGEIIGKLVLVGGLDFKMVIEVLKKMEDDMYRRAMFDAAIRVIISSPDGQLVLDTQASAIEACRSLF 793
BLAST of DCAR_019406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: B9IMB5 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1131.7 bits (2926), Expect = 0.000e+0
Identity = 582/822 (70.80%), Postives = 657/822 (79.93%), Query Frame = 0
Match: B9IMB5 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1131.7 bits (2926), Expect = 0.000e+0
Identity = 582/822 (70.80%), Postives = 657/822 (79.93%), Query Frame = 0
Query: 1 MQQADPTVLSLRPGGGNRGGKTIGSRFDSSSSVFAS----ADLPVFRPHGGSFPIKTGDSRFEGRERIRFTRDQLLQLREYLGYLSKNLIQIEQSDPNIYSNPDAVNITDEILKVKQVVEAEFFIEAQNWGHGESNPPVPQSQPQSRYSEPDSRDWRGRSAQVPSSVEERSWIGDRES---GGRLDSRQQDSNQYNRQDQLNSQFGRGQYSSNQGGAPPTLVKAEVPWSVQRGNLSEKDRVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAELCSDLNEKLPPFPSDEPGGREITFKRVLLNNCQEAFEGADKLRAELREMTAPEQELERRDKERMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADNKICPEEENVEAICHFFNTIGKQLDESPKSRRINDVYFLRLKDLSTNPQLAPRMRFMVRDIIDLRSNNWVPRREEVKAKTITEIHNEAEKTMKLRPGSTASIRNSRGMPSAAQGGMTAGGFPIHRPGTGGMMPGMPGARKMPGMPGIDNDNWEVTRSRTMPRNDSS-QPVGRVQPPFIGKSAVSNPRLLPQGSGGLISGRSSALLQGSSSTQVRP-NYGIGFESPRQDPSPVRQIPTVSMPPVAAKPTTSSVRLNPEELRRKTISLLEEYFSVRILDEALQCVEELKSPGYHAELVKEAISLALEKIPPCVEPVAKLLEYLSVKKVLTAIDIQGGCLLYGSNLDDIGIDLPKAPNNFGEIMGKLILAGQLDFKVVEEVLKKMEDNMFQKHVLSAALGTVTSSPSGQAFLDSQAASIEACKSLF 813
MQQ D TVLSLRPGGG RG + R + SSS +S DLP+ RPHGG+ KTGD RFEGRER+R+TRDQLLQLRE AV I DEILK+KQ +EAE F E Q+W GE+NPP +Q Q RYSEPD+RDWRGRSAQ S EERS RE+ GGR DSRQQ+ NQ NRQDQLNSQF R Q SS+QGG P LVKAEVPWS +R NLSEK+RVLKTVKGILNKLTPEKFD+LKGQLIDSGITS DILKGVISLIFDKAVLEPTFCPMYA+LCSDLNEKLP FPSDEPGG+EITFKRVLLN CQEAFEGADKLR ELR+MTAPEQELERRDKE+++KLRTLGN+RLIGELLKQ MVPEKIVHHIVQELLG DNK CP EE+VEAIC FFNTIGKQLDESPKSRRINDVYF RLK+L++NPQLAPR++FMVR ++DLR NNW+PRREEVKAKTITEIH+EAEKT+ LRPG+TASIRN+RG+ S A G GGFPI+RPGTGGMMPGMPG R+MPGMPGIDNDN E+ R+R MPR D Q GRVQ P KS++ N RLLP+GSGG I GRSSALL GS RP N G G E P Q P + +P S+PPV+ +P S+ R+NP+EL+RKT+SLL+EYFSV +LDEALQCVEELKSPGYH E+VKEAI +ALE PPCVEPVAKLLEYL KKVLTA DI GCLLYGS LDDIGIDLPKAPNNFGEI+GKL+L G LDFK+V EVLKKMED+M+++ + AA+ + SSP GQ LD+QA++IEAC+SLF
Sbjct: 1 MQQGDQTVLSLRPGGG-RGSRLFNPRLEQSSSSTSSSISFGDLPLLRPHGGATSFKTGDLRFEGRERVRYTRDQLLQLRE------------------------AVVIFDEILKIKQEIEAELFGEDQSWSRGETNPP---TQSQIRYSEPDNRDWRGRSAQFSPSGEERSRDSIRENRDFGGRYDSRQQEGNQSNRQDQLNSQFARAQISSHQGGPAPALVKAEVPWSTRRVNLSEKERVLKTVKGILNKLTPEKFDVLKGQLIDSGITSTDILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPSFPSDEPGGKEITFKRVLLNICQEAFEGADKLREELRQMTAPEQELERRDKEKLVKLRTLGNMRLIGELLKQSMVPEKIVHHIVQELLGPDNKGCPAEESVEAICQFFNTIGKQLDESPKSRRINDVYFGRLKELASNPQLAPRLKFMVRGVLDLRMNNWIPRREEVKAKTITEIHSEAEKTLGLRPGATASIRNNRGLISTAPGTTGPGGFPINRPGTGGMMPGMPGTRRMPGMPGIDNDNREIPRNRPMPRGDGPMQLGGRVQSPMFNKSSL-NTRLLPEGSGGFIGGRSSALLHGSGGPPSRPSNSGFGAEPPAQASLPSKTLPAPSVPPVSERPVVSAARVNPDELKRKTVSLLKEYFSVLLLDEALQCVEELKSPGYHPEVVKEAIFIALEANPPCVEPVAKLLEYLFSKKVLTAKDIGTGCLLYGSMLDDIGIDLPKAPNNFGEIIGKLVLVGGLDFKMVIEVLKKMEDDMYRRAMFDAAIRVIISSPDGQLVLDTQASAIEACRSLF 793
BLAST of DCAR_019406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9TL78 ((eukaryotic translation initiation factor-like {ECO:0000313|RefSeq:XP_011083941.1}))
HSP 1 Score: 1130.93 bits (2924), Expect = 0.000e+0
Identity = 589/825 (71.39%), Postives = 663/825 (80.36%), Query Frame = 0
Match: A0A6I9TL78 ((eukaryotic translation initiation factor-like {ECO:0000313|RefSeq:XP_011083941.1}))
HSP 1 Score: 1130.93 bits (2924), Expect = 0.000e+0
Identity = 589/825 (71.39%), Postives = 663/825 (80.36%), Query Frame = 0
Query: 3 QADPTVLSLRPGGGNRGGKTI-GSRFDSSSSVFASADLPVFRPHGG----SFP-IKTGDSRFEGRERIRFTRDQLLQLREYLGYLSKNLIQIEQSDPNIYSNPDAVNITDEILKVKQVVEAEFFIEAQNWGHGESNPPVPQSQPQSRYSEPDSRDWRGRSAQVPSSVEERSW--IGDRESGGRLDSRQQDSNQYNRQDQLNSQFGRGQYSSNQGGAPPTLVKAEVPWSVQRGNLSEKDRVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAELCSDLNEKLPPFPSDEPGGREITFKRVLLNNCQEAFEGADKLRAELREMTAPEQELERRDKERMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADNKICPEEENVEAICHFFNTIGKQLDESPKSRRINDVYFLRLKDLSTNPQLAPRMRFMVRDIIDLRSNNWVPRREEVKAKTITEIHNEAEKTMKLRPGSTASIRNSRGMPSAAQGGMTAGGFPIHRPGTGGMMPGMPGARKMPGMPGIDNDNWEVTRSRTMPRNDSS--QPVGRVQPPFIGKSAVSNPRLLPQGSGGLISGRSSALLQGSSSTQVRP-NYGIGFESP-RQDPSPVRQIP-TVSMPPVAAKPTTSSVRLNPEELRRKTISLLEEYFSVRILDEALQCVEELKSPGYHAELVKEAISLALEKIPPCVEPVAKLLEYLSVKKVLTAIDIQGGCLLYGSNLDDIGIDLPKAPNNFGEIMGKLILAGQLDF-KVVEEVLKKMEDNMFQKHVLSAALGTVTSSPSGQAFLDSQAASIEACKSLF 813
QAD TVLSLRPGGGNRGG + G RFDSS++ A++DLP+ RP+GG S P KTG+SRFEGRERIR+TRDQLLQLRE AV+I +EILKVKQ VEAEFF +W GE+N P +Q QSRYSEPD+RDWR RSAQVP+ EERSW I DR+ GGR D +QQD NQYN+ +QL+SQF R Q SSNQG AP TL+KAEVPWS +RGNLSEKDRVLKTVKGILNKLTPEKFD+LKGQLIDSGIT+ADILKGVISLIFDKAVLEPTFCPMYA LCSDLNEKLPPFPSDEPGG+EITFKRVLLN CQEAFEGADKLR E+R+MTAPEQE ERRDKER+IKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLG DNK CP EENVEAIC FFNTIGKQLDES KS+RIND+YF RLKDLSTNPQLA R+RFMVRD+IDLR+NNWVPRREEVKAKTITEIH+EAEK + LRPG+TASIRNSR M + AQG ++ GGFP++RPG+GGMMPGMPG RKMPGMPG+DNDNWEV RSR+MPR D S Q GRVQ P IGKS N RLLPQGSGG + GR+SALLQGS + RP NYG P Q P+P RQ P S PV KP + + NP+EL+RKT SLLEEYFSVR+LDEALQCVEELKSP YH E+VKEAISL LEK PPCVEPV KLLEYL KKV+ A DI GC+ Y + LDD+ IDLPKAP +FGEI+GKL+LAG LDF KV ++L K+ D+ +QK + +AAL V+S PSG+A LDSQA+ + AC+SLF
Sbjct: 2 QADQTVLSLRPGGGNRGGNRVFGPRFDSSAAA-ANSDLPLLRPYGGAGASSLPTFKTGESRFEGRERIRYTRDQLLQLRE------------------------AVSIPEEILKVKQEVEAEFFGTDPSWSRGENNLP---NQVQSRYSEPDNRDWRNRSAQVPAPTEERSWEAIRDRDFGGRFDPKQQDVNQYNKTEQLSSQFARTQISSNQGVAP-TLIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEAERRDKERLIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNKSCPAEENVEAICQFFNTIGKQLDESQKSKRINDLYFNRLKDLSTNPQLAARLRFMVRDVIDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNSRAMAAGAQGSISPGGFPMNRPGSGGMMPGMPGTRKMPGMPGMDNDNWEVPRSRSMPRGDGSNVQTAGRVQSPLIGKSPAVNQRLLPQGSGGFMGGRTSALLQGSGAPPARPANYGGYLMDPGSQVPAPYRQAPAAASATPVTEKP-IAPAKSNPDELKRKTTSLLEEYFSVRLLDEALQCVEELKSPAYHPEVVKEAISLGLEKSPPCVEPVGKLLEYLFDKKVINAKDIAAGCIFYAALLDDLAIDLPKAPTHFGEIIGKLVLAGALDFNKVARDILAKVGDDYYQKAIFTAALKVVSSDPSGKALLDSQASDVAACESLF 796
BLAST of DCAR_019406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2C9ULV7 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1130.16 bits (2922), Expect = 0.000e+0
Identity = 580/829 (69.96%), Postives = 652/829 (78.65%), Query Frame = 0
Match: A0A2C9ULV7 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1130.16 bits (2922), Expect = 0.000e+0
Identity = 580/829 (69.96%), Postives = 652/829 (78.65%), Query Frame = 0
Query: 1 MQQADPTVLSLRPGGGNRGGKTIGSRFDSSSSV-----------FASADLPVFRPHGGSFPIKTGDSRFEGRERIRFTRDQLLQLREYLGYLSKNLIQIEQSDPNIYSNPDAVNITDEILKVKQVVEAEFFIEAQNWGHGESNPPVPQSQPQSRYSEPDSRDWRGRSAQVPSSVEERSWIGDRES---GGRLDSRQQDSNQYNRQDQLNSQFGRGQYSSNQGGAP-PTLVKAEVPWSVQRGNLSEKDRVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAELCSDLNEKLPPFPSDEPGGREITFKRVLLNNCQEAFEGADKLRAELREMTAPEQELERRDKERMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADNKICPEEENVEAICHFFNTIGKQLDESPKSRRINDVYFLRLKDLSTNPQLAPRMRFMVRDIIDLRSNNWVPRREEVKAKTITEIHNEAEKTMKLRPGSTASIRNSRGMPSAAQGGMTAGGFPIHRPGTGGMMPGMPGARKMPGMPGIDNDNWEVTRSRTMPRNDSSQPVGRVQPPFIGKSAVSNPRLLPQGSGGLISGRSSALLQGSSSTQVRPN-YGIGFESPRQDPSPVRQIPTVSMPPVAAKPTTSSVRLNPEELRRKTISLLEEYFSVRILDEALQCVEELKSPGYHAELVKEAISLALEKIPPCVEPVAKLLEYLSVKKVLTAIDIQGGCLLYGSNLDDIGIDLPKAPNNFGEIMGKLILAGQLDFKVVEEVLKKMEDNMFQKHVLSAALGTVTSSPSGQAFLDSQAASIEACKSLF 813
MQQ D TVLSLRPGGG RG + R DSSSS A DLP+ RPHG + +KTGDSRFE +R+R+TRDQLL LRE AV I+DEILK+K+ +EAE F E Q+W GE NPP QPQSRYSEPD+RDWRGRS Q +S EERSW RE GGR +SRQ D+NQ+NRQDQLNSQF R Q SSNQ G P P LVKAEVPWS +RGNLSEK+RVLKTVKGILNKLTPEKFD+LKGQLIDSGITSADILKGVI LIF+KAVLEPTFCPMYA+LCSDLNEKLPPFPS+EPGG+EITFKRVLLNNCQEAFEGADKLR E+R+MTAPE ELERRDKER+ KLRTLGNIRLIGELLKQKMVPEKIVHHIV+ELLG D KICP EENVEAIC FFNTIGKQLDE+ KS+RIND+YFLRLK+LS+NPQLAPR+RFM+RD++DLR+NNW+PRREEVKAKTITEIH+EAEK + LRPG+ +SIRN+R + SAA G GGF I+RPG GGMMPGMPG R+MPGMPGIDNDNWEV PRN S QP GRVQ P KSA N RLLPQGSGG I G+SSALLQGS+ RP+ +G+G E P Q P + P +PPV KP S+ LNPEEL RKT+SLL+EYF+ R+LDEALQCVEELKSP YH E+VKEAISLALE+ PPCVE VAKLLEYL KKVLTA DI GCLLYGS LDDIGIDLPKAPNNFGE++GKL+LAG LDFKVV EVLKKMED+ +QK V AA+ ++ SP+ Q LDSQ++ IE CKSLF
Sbjct: 1 MQQGDQTVLSLRPGGG-RGSRLFNPRLDSSSSNSSSSSSTISSSIAFGDLPLLRPHGSAL-LKTGDSRFEVHDRVRYTRDQLLSLRE------------------------AVVISDEILKIKREIEAELFGEDQSWSRGEINPP---HQPQSRYSEPDNRDWRGRSGQFSASGEERSWDSLREKTDLGGRYESRQADANQFNRQDQLNSQFARAQISSNQLGGPAPALVKAEVPWSARRGNLSEKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVIQLIFEKAVLEPTFCPMYAQLCSDLNEKLPPFPSEEPGGKEITFKRVLLNNCQEAFEGADKLREEVRQMTAPEHELERRDKERLAKLRTLGNIRLIGELLKQKMVPEKIVHHIVKELLGPDTKICPAEENVEAICQFFNTIGKQLDENTKSQRINDIYFLRLKELSSNPQLAPRLRFMIRDVLDLRANNWIPRREEVKAKTITEIHSEAEKNLGLRPGAASSIRNNRAVVSAAPGNAGPGGFLINRPGAGGMMPGMPGTRRMPGMPGIDNDNWEV------PRNRSMQPSGRVQSPMYSKSASLNTRLLPQGSGGFIGGKSSALLQGSTGPSPRPHSFGLGNELPAQVPVVSKPSPAPYVPPVVDKPAGSAASLNPEELGRKTVSLLKEYFNARLLDEALQCVEELKSPSYHPEVVKEAISLALEENPPCVELVAKLLEYLLAKKVLTARDIGTGCLLYGSLLDDIGIDLPKAPNNFGEVIGKLVLAGGLDFKVVAEVLKKMEDDRYQKAVFDAAMRIISCSPNAQVLLDSQSSDIEVCKSLF 794
BLAST of DCAR_019406 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AWS3 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1123.23 bits (2904), Expect = 0.000e+0
Identity = 586/824 (71.12%), Postives = 661/824 (80.22%), Query Frame = 0
Match: A0A5J5AWS3 (MI domain-containing protein {ECO:0000259|PROSITE:PS51366})
HSP 1 Score: 1123.23 bits (2904), Expect = 0.000e+0
Identity = 586/824 (71.12%), Postives = 661/824 (80.22%), Query Frame = 0
Query: 3 QADPTVLSLRPGGG-NRGGKTIGSRFDSSSSVFASA---DLPVFRPHGGSFPI--KTGDSRFEGRERIRFTRDQLLQLREYLGYLSKNLIQIEQSDPNIYSNPDAVNITDEILKVKQVVEAEFFIEAQNWGHGESNPPVPQSQPQSRYSEPDSRDWRGRSAQVPSSVEERS--WIGD-RESGGRLDSRQQDSNQYNRQDQLNSQFGRGQYSSNQGGAP-PTLVKAEVPWSVQRGNLSEKDRVLKTVKGILNKLTPEKFDILKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAELCSDLNEKLPPFPSDEPGGREITFKRVLLNNCQEAFEGADKLRAELREMTAPEQELERRDKERMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADNKICPEEENVEAICHFFNTIGKQLDESPKSRRINDVYFLRLKDLSTNPQLAPRMRFMVRDIIDLRSNNWVPRREEVKAKTITEIHNEAEKTMKLRPGSTASIRNSRGMPSAAQGGMTAGGFPIHRPGTGGMMPGMPGARKMPGMPGIDNDNWEVTRSRTMPRNDSS--QPVGRVQPPFIGKSAVSNPRLLPQGSGGLISGRSSALLQGSSSTQVR-PNYGIGFESPRQDPSPVRQIPTVSMPPVAAKPTTSSVRLNPEELRRKTISLLEEYFSVRILDEALQCVEELKSPGYHAELVKEAISLALEKIPPCVEPVAKLLEYLSVKKVLTAIDIQGGCLLYGSNLDDIGIDLPKAPNNFGEIMGKLILAGQLDFKVVEEVLKKMEDNMFQKHVLSAALGTVTSSPSGQAFLDSQAASIEACKSLF 813
QAD TVLSLRPGGG NRG + +GSRF+SS+ F S+ DLPV RPHGG+ P+ KTGDS F+G ER+R+TRDQLLQLRE VNI++++LK+KQ VEAEFF E QNWG ESN Q+Q SRYS D+RDWRGRSAQ P+S ERS I D RE G DSRQQ++ QYNRQDQLNSQF R Q SS QG P P L+KAEVPWS +RGNLS+K+RVLKTVKGILNKLTPEKFD+LKGQLIDSGIT+ADILKGVISLIFDKAVLEPTFC MYA LCSDLNEKLPPFPSDEPGG+EITFKRVLLN CQEAFEG+DKLRAELR+MT P+QELERRDKERM+KLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLG D K CPEEENVEAIC FFNTIGKQLDESPKSRRINDVYF RLK+LSTNPQLAPR+RFMV+D++DLR+N+WVPRREEVKAKTITEIH E EK + LRPG+TASIRNSRG+ S QG ++ GGFPI+RPG GGMMPGMPG RKMPGMPG DNDNWEV RSR+ PR D+S Q GRVQPP IGKS N +LLPQGSGG S R+S L+ G+ + VR PN +P P+P R + T S+ PVA KP + +LN +EL+RKT+SLLEEYFSV ILDEALQCVEELKSP +H E+VKE ISL LEK PP VE VAKLLEYL KK+LTA DI GCLLYGS LDDIGIDLPKAPNNFGE++GKL+LAG LDFKVV EVLKK+ED+ FQK + +AA+ VTSSP+GQ L+SQA+ IEACK+L
Sbjct: 2 QADQTVLSLRPGGGGNRGSRVLGSRFESSA--FGSSLPSDLPVLRPHGGAPPLSNKTGDSWFDGHERVRYTRDQLLQLRE------------------------VVNISEDVLKIKQEVEAEFFGEDQNWGSAESNL---QNQSLSRYSGTDNRDWRGRSAQFPTSGGERSRETIRDNREFSGPFDSRQQEAAQYNRQDQLNSQFARAQISSYQGVGPAPALIKAEVPWSARRGNLSDKERVLKTVKGILNKLTPEKFDLLKGQLIDSGITTADILKGVISLIFDKAVLEPTFCHMYALLCSDLNEKLPPFPSDEPGGKEITFKRVLLNICQEAFEGSDKLRAELRQMTGPDQELERRDKERMLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGHDTKTCPEEENVEAICQFFNTIGKQLDESPKSRRINDVYFNRLKELSTNPQLAPRLRFMVKDVLDLRANSWVPRREEVKAKTITEIHAEGEKDLGLRPGATASIRNSRGIVSGGQGSISPGGFPINRPGAGGMMPGMPGTRKMPGMPGTDNDNWEVPRSRSFPRGDASTIQSTGRVQPPLIGKSPSLNSKLLPQGSGGPPSARTSVLVHGTGALPVRMPNSQAPAPAPTPAPAPTRPVTTASVFPVAEKP-VAPAKLNLDELQRKTVSLLEEYFSVLILDEALQCVEELKSPSFHPEVVKETISLGLEKSPPRVEQVAKLLEYLFAKKILTARDIGTGCLLYGSTLDDIGIDLPKAPNNFGEVIGKLVLAGGLDFKVVTEVLKKVEDDKFQKDIFAAAMRIVTSSPAGQGILNSQASDIEACKNLL 795
| Match Name | Stats | Description |
|---|---|---|
| A5BU43 | E-Value: 0.000e+0, PID: 71.41 | MI domain-containing protein {ECO:0000259|PROSITE:... [more] |
| F6HYK5 | E-Value: 0.000e+0, PID: 71.29 | MI domain-containing protein {ECO:0000259|PROSITE:... [more] |
| A0A5B7AAC4 | E-Value: 0.000e+0, PID: 72.97 | MI domain-containing protein {ECO:0000259|PROSITE:... [more] |
| A0A067KR86 | E-Value: 0.000e+0, PID: 70.71 | MI domain-containing protein {ECO:0000259|PROSITE:... [more] |
| A0A2C9VMG3 | E-Value: 0.000e+0, PID: 70.37 | MI domain-containing protein {ECO:0000259|PROSITE:... [more] |
| A0A385JIT8 | E-Value: 0.000e+0, PID: 70.80 | (Eukaryotic translation initiation factor {ECO:000... [more] |
| B9IMB5 | E-Value: 0.000e+0, PID: 70.80 | MI domain-containing protein {ECO:0000259|PROSITE:... [more] |
| A0A6I9TL78 | E-Value: 0.000e+0, PID: 71.39 | (eukaryotic translation initiation factor-like {EC... [more] |
| A0A2C9ULV7 | E-Value: 0.000e+0, PID: 69.96 | MI domain-containing protein {ECO:0000259|PROSITE:... [more] |
| A0A5J5AWS3 | E-Value: 0.000e+0, PID: 71.12 | MI domain-containing protein {ECO:0000259|PROSITE:... [more] |
Pages
back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |