Resource Type:
Polypeptide
Name:
DCAR_016189
Identifier:
DCAR_016189.mRNA-protein
Sequence:
MMSLNGSTFLYNPVIGVSRSYAQRRVSAPSVVVSSASSSNADRKATVLME
TNLKAPAALVIESDSKTSVGGGVEDVYGEDSATEEHNITPWTVSVASGYS
LMRDPHHNKGLAFSEKERDAHYLRGLLPPVVVSQDLQVKKLMNCIRNYQV
PLQKYMAMMDYQEHNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSIL
GRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGM
GIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEDLLNDEFYIGLRQRRAT
GQEYAELLHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYGATHLVFN
DDIQGTASVVLAGIMAALKLVGGTLADQKFLFLGAGEAGTGIAELIALEI
SKQTNTPLEETRKKIFLVDSKGLIVKSRLESLQHFKKPWAHEHEPIRELV
DAVKAIKPTVLIGSSGVGRTFTKDVVETMASLNEKPIIFALSNPTSQSEC
TAKEAYTWSKGRAIYASGSPFDPIEYNGKIYASGQANNAYIFPGFGLGLI
ISGAIRVHDDMLLAASEALAAEVTQENFDKGLIFPPFTNIRKISANIAAK
VAAKAYELGLATRLPQPHDLVAYAESCMYSPSYRSYR*
Sequence Length:
638
Sequence Checksum:
2c1391160c5496575d3d21e2192aa9cf
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_016189, derives from mRNA, DCAR_016189. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_016189 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_016189 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BF85 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1118.22 bits (2891), Expect = 0.000e+0
Identity = 537/641 (83.78%), Postives = 587/641 (91.58%), Query Frame = 0
Match: A0A5J5BF85 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1118.22 bits (2891), Expect = 0.000e+0
Identity = 537/641 (83.78%), Postives = 587/641 (91.58%), Query Frame = 0
Query: 1 MMSLNGSTFLYNPVIGVSRSYA--QRRVSAPSVVVSSASSSNADRKATVLMETNLKAP--AALVIESDSKTSVGGGVEDVYGEDSATEEHNITPWTVSVASGYSLMRDPHHNKGLAFSEKERDAHYLRGLLPPVVVSQDLQVKKLMNCIRNYQVPLQKYMAMMDYQEHNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSILGRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEDLLNDEFYIGLRQRRATGQEYAELLHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYGATHLVFNDDIQGTASVVLAGIMAALKLVGGTLADQKFLFLGAGEAGTGIAELIALEISKQTNTPLEETRKKIFLVDSKGLIVKSRLESLQHFKKPWAHEHEPIRELVDAVKAIKPTVLIGSSGVGRTFTKDVVETMASLNEKPIIFALSNPTSQSECTAKEAYTWSKGRAIYASGSPFDPIEYNGKIYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAAEVTQENFDKGLIFPPFTNIRKISANIAAKVAAKAYELGLATRLPQPHDLVAYAESCMYSPSYRSYR 637
M+SLNGS+FL + G SRS+A QRRVSAP VV S++ R +VLME+ LK A V+E D K++V GGVEDVYGE +ATE+H +TPWTVSVASGYSL+RDPHHNKGLAF+E+ERD HYLRGLLPPVVV+Q+LQ+KK+M+ IR Y+VPLQ+YMAMMD QE NERLFYKLLI+NVEELLP+VYTPTVGEACQKYGSI RPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNE+LL DEFYIGLR+RRATGQEYAELLHEFM AVKQNYGEKVLIQFEDFANHNAFDLLAKYG+THLVFNDDIQGTASVVLAG+MAALKLVGGTLA+ +FLFLGAGEAGTGIAELIALE+SKQT PLEETRKKI+LVDSKGLIV SR ESLQ FKKPWAH+HEP++ELVDAVKAIKPTVLIGSSG GRTFTK+V+E MAS NEKPII ALSNPTSQSECTA+EAYTWS+GRAI+ASGSPFDP+EY GK+Y SGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALA +VT+ENFDKGLI+PPFTNIRKISA+IAA VAAKAYELGLATRLPQP +LVAYAESCMYSP+Y SYR
Sbjct: 1 MISLNGSSFLNKSLYGASRSFAHSQRRVSAPLVVAMSSNGRQGGRNVSVLMESTLKETRDGASVLEMDPKSTVDGGVEDVYGEHTATEDHPVTPWTVSVASGYSLLRDPHHNKGLAFTEEERDIHYLRGLLPPVVVTQELQLKKVMHNIRQYEVPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNENLLEDEFYIGLRRRRATGQEYAELLHEFMDAVKQNYGEKVLIQFEDFANHNAFDLLAKYGSTHLVFNDDIQGTASVVLAGLMAALKLVGGTLAEHRFLFLGAGEAGTGIAELIALEMSKQTQAPLEETRKKIWLVDSKGLIVNSRKESLQQFKKPWAHQHEPVKELVDAVKAIKPTVLIGSSGAGRTFTKEVIEAMASFNEKPIILALSNPTSQSECTAEEAYTWSEGRAIFASGSPFDPVEYRGKVYVSGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALATQVTEENFDKGLIYPPFTNIRKISAHIAANVAAKAYELGLATRLPQPENLVAYAESCMYSPNYGSYR 641
BLAST of DCAR_016189 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZKW9 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1107.43 bits (2863), Expect = 0.000e+0
Identity = 546/643 (84.91%), Postives = 590/643 (91.76%), Query Frame = 0
Match: A0A5B6ZKW9 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1107.43 bits (2863), Expect = 0.000e+0
Identity = 546/643 (84.91%), Postives = 590/643 (91.76%), Query Frame = 0
Query: 1 MMSLNGSTFLYNPVIGVSRSYA--QRRVSAPSVVVSSASSSNADRKATVLMETNLKAP--AALVIESDSKTSVGGGVEDVYGEDSATEEHNITPWTVSVASGYSLMRDPHHNKGLAFSEKERDAHYLRGLLPPVVVSQDLQVKKLMNCIRNYQVPLQKYMAMMDYQEHNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSILGRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEDLLNDEFYIGLRQRRATGQEYAELLHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYGATHLVFNDDIQGTASVVLAGIMAALKLVGGTLADQKFLFLGAGEAGTGIAELIALEISKQTNTPLEETRKKIFLVDSKGLIVKSRLESLQHFKKPWA--HEHEPIRELVDAVKAIKPTVLIGSSGVGRTFTKDVVETMASLNEKPIIFALSNPTSQSECTAKEAYTWSKGRAIYASGSPFDPIEYNGKIYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAAEVTQENFDKGLIFPPFTNIRKISANIAAKVAAKAYELGLATRLPQPHDLVAYAESCMYSPSYRSYR 637
M+SLNGS+FL N + G SRS+A QRRVSAP VV S++ DR +VLME LK A V++ D +++VGGGVEDVYGED ATE+ +TPWTVSVASGYSL+RDPHHNKGLAF+EKERD HYL GLLPPVVV+Q+LQ+KKLM+ +R Y+VPLQ+YMAMMD QE NERLFYKLLI+NVEELLP+VYTPTVGEACQKYGSIL RPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNE LL DEFYIGLR+RRATGQEYAELLHEFM+AVKQNYGEKVLIQFEDFANHNAFDLLAKYG+THLVFNDDIQGTASVVLAG+MAALKLVGG+LA+ FLFLGAGEAGTGIAELIALE+SKQT PLEETRKKI+LVDSKGLIV SR ESLQHFKKPWA HEHEP++ELVDAVKAIKPTVLIGSSG GRTFTK+VVE MAS NEKPII ALSNPTSQSECTA+EAYTWS+GRAI+ASGSPFDP+EY GK+Y SGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAA+VTQENFDKGLI+PPFTNIRKISA IAAKVAAKAYELGLATRLPQP +LVAYAESCMYSPSYRSYR
Sbjct: 1 MISLNGSSFLNNSLYGASRSFAHSQRRVSAPLVVTLSSNGRPRDRNVSVLMENTLKETRDGASVLDMDPESAVGGGVEDVYGEDRATEDQPVTPWTVSVASGYSLLRDPHHNKGLAFTEKERDVHYLCGLLPPVVVTQELQLKKLMHNLRQYEVPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSILRRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEKLLKDEFYIGLRRRRATGQEYAELLHEFMAAVKQNYGEKVLIQFEDFANHNAFDLLAKYGSTHLVFNDDIQGTASVVLAGLMAALKLVGGSLAEHTFLFLGAGEAGTGIAELIALEMSKQTQAPLEETRKKIWLVDSKGLIVSSRKESLQHFKKPWAHEHEHEPVKELVDAVKAIKPTVLIGSSGAGRTFTKEVVEAMASFNEKPIILALSNPTSQSECTAEEAYTWSEGRAIFASGSPFDPVEYEGKVYVSGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAAQVTQENFDKGLIYPPFTNIRKISAEIAAKVAAKAYELGLATRLPQPENLVAYAESCMYSPSYRSYR 643
BLAST of DCAR_016189 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1CIA9 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1100.89 bits (2846), Expect = 0.000e+0
Identity = 530/641 (82.68%), Postives = 586/641 (91.42%), Query Frame = 0
Match: M1CIA9 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1100.89 bits (2846), Expect = 0.000e+0
Identity = 530/641 (82.68%), Postives = 586/641 (91.42%), Query Frame = 0
Query: 1 MMSLNGSTFLYNPVIGVSRSYAQ--RRVSAPSVVVSSASSSN--ADRKATVLMETNLKAPAALVIESDSKTSVGGGVEDVYGEDSATEEHNITPWTVSVASGYSLMRDPHHNKGLAFSEKERDAHYLRGLLPPVVVSQDLQVKKLMNCIRNYQVPLQKYMAMMDYQEHNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSILGRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEDLLNDEFYIGLRQRRATGQEYAELLHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYGATHLVFNDDIQGTASVVLAGIMAALKLVGGTLADQKFLFLGAGEAGTGIAELIALEISKQTNTPLEETRKKIFLVDSKGLIVKSRLESLQHFKKPWAHEHEPIRELVDAVKAIKPTVLIGSSGVGRTFTKDVVETMASLNEKPIIFALSNPTSQSECTAKEAYTWSKGRAIYASGSPFDPIEYNGKIYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAAEVTQENFDKGLIFPPFTNIRKISANIAAKVAAKAYELGLATRLPQPHDLVAYAESCMYSPSYRSYR 637
M SLNG++F N + GVSR Q RRVSAP VVV++ SS+ D +VL+E L AA V E + K++V GGV+DVYGEDSATE+ +ITPWT+SVASG+SL+R+PH+NKGLAFSE+ERDAHYLRGLLPPVV+S DLQVKK+MN IR Y VPLQ+YMAMMD QE NERLFYKLLI+NVEELLPIVYTPTVGEACQKYGSI RPQGLFISLKEKGKI EVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNE+LLNDEFYIGLRQRRATGQEYAELL EFM AVKQNYGEKVLIQFEDFANHNAFDLLAKYG +HLVFNDDIQGTASVVLAG+MAAL LVGG+L++ FLFLGAGEAGTGIAELIALE+SKQT PLEETRKKI++VDSKGLIVKSR+E LQHFK+PWAH+HEP++ELV+AVK+IKPTVLIGSSG GRTFTK+VV+ MA+ NEKPIIFALSNPTSQSECTA+EAY+WS+GRAI+ASGSPF P+EYNGK+YASGQANNAYIFPGFGLGLIISGAIRVHDDMLL ASEALA +V+QENF+KGLI+PPF+NIRKISA+IAAKVAAKAYELGLATRLPQP DLVAYAESCMYSP+YRSYR
Sbjct: 1 MFSLNGTSFTNNSLSGVSRCLTQSSRRVSAPMVVVAAVSSNGKPGDGSVSVLVENALTESAAPV-EMEVKSTVTGGVQDVYGEDSATEDQSITPWTLSVASGFSLLRNPHYNKGLAFSERERDAHYLRGLLPPVVISHDLQVKKMMNSIRKYDVPLQRYMAMMDLQEMNERLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIFRRPQGLFISLKEKGKIHEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNENLLNDEFYIGLRQRRATGQEYAELLDEFMYAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTSHLVFNDDIQGTASVVLAGLMAALNLVGGSLSEHTFLFLGAGEAGTGIAELIALEMSKQTGIPLEETRKKIWMVDSKGLIVKSRMEMLQHFKRPWAHDHEPVQELVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLVASEALAEQVSQENFEKGLIYPPFSNIRKISAHIAAKVAAKAYELGLATRLPQPKDLVAYAESCMYSPAYRSYR 640
BLAST of DCAR_016189 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6IUG1 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1098.19 bits (2839), Expect = 0.000e+0
Identity = 524/642 (81.62%), Postives = 586/642 (91.28%), Query Frame = 0
Match: A0A1J6IUG1 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1098.19 bits (2839), Expect = 0.000e+0
Identity = 524/642 (81.62%), Postives = 586/642 (91.28%), Query Frame = 0
Query: 1 MMSLNGSTFLYNPVIGVSRSYAQ---RRVSAPSVVVSSASSSN--ADRKATVLMETNLKAPAALVIESDSKTSVGGGVEDVYGEDSATEEHNITPWTVSVASGYSLMRDPHHNKGLAFSEKERDAHYLRGLLPPVVVSQDLQVKKLMNCIRNYQVPLQKYMAMMDYQEHNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSILGRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEDLLNDEFYIGLRQRRATGQEYAELLHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYGATHLVFNDDIQGTASVVLAGIMAALKLVGGTLADQKFLFLGAGEAGTGIAELIALEISKQTNTPLEETRKKIFLVDSKGLIVKSRLESLQHFKKPWAHEHEPIRELVDAVKAIKPTVLIGSSGVGRTFTKDVVETMASLNEKPIIFALSNPTSQSECTAKEAYTWSKGRAIYASGSPFDPIEYNGKIYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAAEVTQENFDKGLIFPPFTNIRKISANIAAKVAAKAYELGLATRLPQPHDLVAYAESCMYSPSYRSYR 637
M SLNGS+F N + GVSR Q R S P VVV++ +S+ DR +VL+E ++K AA +E + K++V GGV DVYGEDSATE+ +ITPWT+SVASGYSL+R+PH+NKGLAFSEKERD+HYLRGLLPPVVV+ DLQVKK+MN +R Y+VPLQ+Y+AMMD QE NERL+YKLL++NVEELLPIVYTPTVGEACQKYGSI RPQGLFISLKEKGKI EVLKNWPE+KIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLP+TIDVGTNNEDLLNDEFYIGLRQRRA GQEYAEL EFM AVKQNYGEKVLIQFEDFANHNAFDLLAKYG +HLVFNDDIQGTASVVLAG+MA+L+LVGGTLA+ FLFLGAGEAGTGIAELIALE+SKQT PLEETRKKI+++DSKGLIV SR+ESLQHFK+PWAHEHEP++ELV+AVK+IKPTVLIGSSG GRTFTK+VV+ MA+ NEKPIIFALSNPTSQSECTA+EAYTWS+GRAI+ASGSPF P+EYNGK+YASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALA +V+QENF+KGLI+PPFTNIRKISANIAAKVAAKAYELGLATRLP+P +LVAYAESCMYSP+YRSYR
Sbjct: 1 MFSLNGSSFTNNSLSGVSRCVTQSSRRGASGPMVVVAAVNSNGKPGDRNVSVLVENSMKESAAAPVEKEIKSTVTGGVGDVYGEDSATEDQSITPWTLSVASGYSLLRNPHYNKGLAFSEKERDSHYLRGLLPPVVVNHDLQVKKMMNNLRQYEVPLQRYIAMMDIQEMNERLYYKLLMDNVEELLPIVYTPTVGEACQKYGSIFRRPQGLFISLKEKGKINEVLKNWPERKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTNNEDLLNDEFYIGLRQRRARGQEYAELFDEFMYAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTSHLVFNDDIQGTASVVLAGLMASLQLVGGTLAEHTFLFLGAGEAGTGIAELIALEMSKQTGIPLEETRKKIWMLDSKGLIVNSRMESLQHFKRPWAHEHEPVKELVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYTWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAEQVSQENFEKGLIYPPFTNIRKISANIAAKVAAKAYELGLATRLPEPVNLVAYAESCMYSPAYRSYR 642
BLAST of DCAR_016189 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3Y729 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1098.19 bits (2839), Expect = 0.000e+0
Identity = 524/642 (81.62%), Postives = 587/642 (91.43%), Query Frame = 0
Match: A0A1S3Y729 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1098.19 bits (2839), Expect = 0.000e+0
Identity = 524/642 (81.62%), Postives = 587/642 (91.43%), Query Frame = 0
Query: 1 MMSLNGSTFLYNPVIGVSRSYAQ---RRVSAPSVVVSSASSSN--ADRKATVLMETNLKAPAALVIESDSKTSVGGGVEDVYGEDSATEEHNITPWTVSVASGYSLMRDPHHNKGLAFSEKERDAHYLRGLLPPVVVSQDLQVKKLMNCIRNYQVPLQKYMAMMDYQEHNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSILGRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEDLLNDEFYIGLRQRRATGQEYAELLHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYGATHLVFNDDIQGTASVVLAGIMAALKLVGGTLADQKFLFLGAGEAGTGIAELIALEISKQTNTPLEETRKKIFLVDSKGLIVKSRLESLQHFKKPWAHEHEPIRELVDAVKAIKPTVLIGSSGVGRTFTKDVVETMASLNEKPIIFALSNPTSQSECTAKEAYTWSKGRAIYASGSPFDPIEYNGKIYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAAEVTQENFDKGLIFPPFTNIRKISANIAAKVAAKAYELGLATRLPQPHDLVAYAESCMYSPSYRSYR 637
M SLNGS+F N + GVSR Q R VS P VVV++ +S+ DR +VL+E ++K AA +E + K++V GGV DVYGEDSATE+ +ITPWT+SVASGYSL+R+PH+NKGLAFSEKERD+HYLRGLLPPVVV+ DLQVKK+MN +R Y+VPLQ+Y+AMMD QE NERL+YKLL++NVEELLPIVYTPTVGEACQKYGSI RPQGLFISLKEKGKI EVLKNWPE+KIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLP+TIDVGTNNEDLLNDEFYIGLRQRRA GQEYAEL EFM AVKQNYGEKVLIQFEDFANHNAFDLLAKYG +HLVFNDDIQGTASVVLAG+MAAL+LVGGTL++ FLFLGAGEAGTGIAELIALE+SKQT PLEETRKKI+++DSKGLIV SR+ESLQHFK+PWAH+HEP+++LV+AVK+IKPTVLIGSSG GRTFTK+VV+ MA+ NEKPIIFALSNPTSQSECTA+EAYTWS+GRAI+ASGSPF P+EYNGKIYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALA +V+QENF+KGLI+PPFTNIRKISANIAAKVAAKAYELGLATRLP+P +LVAYAESCMYSP+YRSYR
Sbjct: 1 MFSLNGSSFTNNSLSGVSRCLTQSSRRGVSGPMVVVAAVNSNGKPGDRNVSVLVENSMKESAAAPVEKEIKSTVTGGVGDVYGEDSATEDQSITPWTLSVASGYSLLRNPHYNKGLAFSEKERDSHYLRGLLPPVVVNHDLQVKKMMNNLRQYEVPLQRYIAMMDIQEMNERLYYKLLMDNVEELLPIVYTPTVGEACQKYGSIFRRPQGLFISLKEKGKINEVLKNWPERKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTNNEDLLNDEFYIGLRQRRARGQEYAELFDEFMYAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTSHLVFNDDIQGTASVVLAGLMAALQLVGGTLSEHTFLFLGAGEAGTGIAELIALEMSKQTGIPLEETRKKIWMLDSKGLIVNSRMESLQHFKRPWAHDHEPVKDLVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYTWSEGRAIFASGSPFAPVEYNGKIYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAEQVSQENFEKGLIYPPFTNIRKISANIAAKVAAKAYELGLATRLPEPANLVAYAESCMYSPAYRSYR 642
BLAST of DCAR_016189 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A022S3G6 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1098.19 bits (2839), Expect = 0.000e+0
Identity = 528/654 (80.73%), Postives = 582/654 (88.99%), Query Frame = 0
Match: A0A022S3G6 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1098.19 bits (2839), Expect = 0.000e+0
Identity = 528/654 (80.73%), Postives = 582/654 (88.99%), Query Frame = 0
Query: 1 MMSLNGSTFLYNPVIGVSRSY---AQRRVSAPSVVVSSASSSNA---DRKATVLMETNLK-----------APAALVIESDSKTSVGGGVEDVYGEDSATEEHNITPWTVSVASGYSLMRDPHHNKGLAFSEKERDAHYLRGLLPPVVVSQDLQVKKLMNCIRNYQVPLQKYMAMMDYQEHNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSILGRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEDLLNDEFYIGLRQRRATGQEYAELLHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYGATHLVFNDDIQGTASVVLAGIMAALKLVGGTLADQKFLFLGAGEAGTGIAELIALEISKQTNTPLEETRKKIFLVDSKGLIVKSRLESLQHFKKPWAHEHEPIRELVDAVKAIKPTVLIGSSGVGRTFTKDVVETMASLNEKPIIFALSNPTSQSECTAKEAYTWSKGRAIYASGSPFDPIEYNGKIYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAAEVTQENFDKGLIFPPFTNIRKISANIAAKVAAKAYELGLATRLPQPHDLVAYAESCMYSPSYRSYR 637
M SLNGSTFL N + GVS+S AQR++SAP V ++ SSN DR VLME+ LK A VIE D+K++VGGGVEDVYGEDSATE+ ITPWTV+VASGY L+RDPH+NKGLAF+EKERDAH+LRGLLPPVV+SQ LQVKK+M+ +R YQVPLQ+YMAMMD QE NERLFYKLLIENVEELLP+VYTPTVGEACQKYGSI +PQGLFISLKEKG+ILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLY+ALGGIRPSACLPVTIDVGTNNE LLNDEFYIGLR+RRATGQEY+ELL EFMSAVKQNYGEKVL+QFEDFANHNAFDLLAKYG +HLVFNDDIQGTASVVLAG+MA+L LVGGTLA+ FLFLGAGEAGTGIAELIALEISKQT+ P+EE RKKI+LVDSKGLIV SR ESLQHFK+PWAHEHEP+ L++AVK IKPTVLIGSSG GRTFTK+VVE M+S NEKP+I ALSNPTSQSECTA+EAYTWS+GRAI+ASGSPF P EYNGK YASGQANNAYIFPGFGLGLIISGAIRVH+DMLLAASEALA +V+QEN DKGLI+PPF+NIR ISA IAA+VAAKAYELGLATRLPQP +LVAYAESCMYSP+YR+YR
Sbjct: 1 MFSLNGSTFLNNSLCGVSKSLTQSAQRKISAPPTTVVASVSSNGRSGDRNVGVLMESTLKEMNENATSSSSASQITVIEKDTKSTVGGGVEDVYGEDSATEDQYITPWTVTVASGYPLLRDPHYNKGLAFTEKERDAHFLRGLLPPVVISQALQVKKMMHNMRQYQVPLQRYMAMMDLQERNERLFYKLLIENVEELLPVVYTPTVGEACQKYGSIFRQPQGLFISLKEKGRILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYSALGGIRPSACLPVTIDVGTNNEQLLNDEFYIGLRRRRATGQEYSELLDEFMSAVKQNYGEKVLVQFEDFANHNAFDLLAKYGTSHLVFNDDIQGTASVVLAGLMASLNLVGGTLAEHTFLFLGAGEAGTGIAELIALEISKQTSVPVEEARKKIWLVDSKGLIVNSRFESLQHFKRPWAHEHEPVTTLLEAVKTIKPTVLIGSSGAGRTFTKEVVEAMSSFNEKPVILALSNPTSQSECTAEEAYTWSEGRAIFASGSPFSPAEYNGKFYASGQANNAYIFPGFGLGLIISGAIRVHEDMLLAASEALAEQVSQENLDKGLIYPPFSNIRYISAQIAARVAAKAYELGLATRLPQPENLVAYAESCMYSPNYRNYR 654
BLAST of DCAR_016189 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4B4D7 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1096.26 bits (2834), Expect = 0.000e+0
Identity = 523/642 (81.46%), Postives = 586/642 (91.28%), Query Frame = 0
Match: A0A1S4B4D7 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1096.26 bits (2834), Expect = 0.000e+0
Identity = 523/642 (81.46%), Postives = 586/642 (91.28%), Query Frame = 0
Query: 1 MMSLNGSTFLYNPVIGVSRSYAQ---RRVSAPSVVVSSASSSN--ADRKATVLMETNLKAPAALVIESDSKTSVGGGVEDVYGEDSATEEHNITPWTVSVASGYSLMRDPHHNKGLAFSEKERDAHYLRGLLPPVVVSQDLQVKKLMNCIRNYQVPLQKYMAMMDYQEHNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSILGRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEDLLNDEFYIGLRQRRATGQEYAELLHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYGATHLVFNDDIQGTASVVLAGIMAALKLVGGTLADQKFLFLGAGEAGTGIAELIALEISKQTNTPLEETRKKIFLVDSKGLIVKSRLESLQHFKKPWAHEHEPIRELVDAVKAIKPTVLIGSSGVGRTFTKDVVETMASLNEKPIIFALSNPTSQSECTAKEAYTWSKGRAIYASGSPFDPIEYNGKIYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAAEVTQENFDKGLIFPPFTNIRKISANIAAKVAAKAYELGLATRLPQPHDLVAYAESCMYSPSYRSYR 637
M SLNGS+F N + GVSR Q R VS P VV ++ +S+ DR +VL+E ++K AA +E + K++V GGV DVYGEDSATE+ +ITPWT+SVASGYSL+R+PH+NKGLAFSEKERD+HYLRGLLPPVVV+ DLQVKK+MN +R Y+VPLQ+Y+AMMD QE NERL+YKLL++NVEELLPIVYTPTVGEACQKYGSI RPQGLFISLKEKGKI EVLKNWPE+KIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLP+TIDVGTNNEDLLNDEFYIGLRQRRA GQEYAEL EFM AVKQNYGEKVLIQFEDFANHNAFDLLAKYG +HLVFNDDIQGTASVVLAG+MA+L+LVGGTLA+ FLFLGAGEAGTGIAELIALE+SKQT PLEETRKKI+++DSKGLIV SR+ESLQHFK+PWAHEHEP++ELV+AVK+IKPTVLIGSSG GRTFTK+VV+ MA+ NEKPIIFALSNPTSQSECTA+EAY+WS+GRAI+ASGSPF P+EYNGK+YASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALA +V+QENF+KGLI+PPFTNIRKISANIAAKVAAKAYELGLATRLP+P +LVAYAESCMYSP+YRSYR
Sbjct: 87 MFSLNGSSFTNNSLSGVSRCLTQSSRRGVSGPMVVAAAVNSNGKPGDRNVSVLVENSMKESAAAPVEKEIKSTVTGGVGDVYGEDSATEDQSITPWTLSVASGYSLLRNPHYNKGLAFSEKERDSHYLRGLLPPVVVNHDLQVKKMMNNLRQYEVPLQRYIAMMDIQEMNERLYYKLLMDNVEELLPIVYTPTVGEACQKYGSIFRRPQGLFISLKEKGKINEVLKNWPERKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTNNEDLLNDEFYIGLRQRRARGQEYAELFDEFMYAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTSHLVFNDDIQGTASVVLAGLMASLQLVGGTLAEHTFLFLGAGEAGTGIAELIALEMSKQTGIPLEETRKKIWMLDSKGLIVNSRMESLQHFKRPWAHEHEPVKELVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAEQVSQENFEKGLIYPPFTNIRKISANIAAKVAAKAYELGLATRLPEPANLVAYAESCMYSPAYRSYR 728
BLAST of DCAR_016189 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7WDN8 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1095.88 bits (2833), Expect = 0.000e+0
Identity = 522/642 (81.31%), Postives = 586/642 (91.28%), Query Frame = 0
Match: A0A1U7WDN8 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1095.88 bits (2833), Expect = 0.000e+0
Identity = 522/642 (81.31%), Postives = 586/642 (91.28%), Query Frame = 0
Query: 1 MMSLNGSTFLYNPVIGVSRSYAQ---RRVSAPSVVVSSASSSN--ADRKATVLMETNLKAPAALVIESDSKTSVGGGVEDVYGEDSATEEHNITPWTVSVASGYSLMRDPHHNKGLAFSEKERDAHYLRGLLPPVVVSQDLQVKKLMNCIRNYQVPLQKYMAMMDYQEHNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSILGRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEDLLNDEFYIGLRQRRATGQEYAELLHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYGATHLVFNDDIQGTASVVLAGIMAALKLVGGTLADQKFLFLGAGEAGTGIAELIALEISKQTNTPLEETRKKIFLVDSKGLIVKSRLESLQHFKKPWAHEHEPIRELVDAVKAIKPTVLIGSSGVGRTFTKDVVETMASLNEKPIIFALSNPTSQSECTAKEAYTWSKGRAIYASGSPFDPIEYNGKIYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAAEVTQENFDKGLIFPPFTNIRKISANIAAKVAAKAYELGLATRLPQPHDLVAYAESCMYSPSYRSYR 637
M SLNGS+F N + GVSR Q R VS P VV ++ +S+ DR +VL+E ++K AA +E + K++V GGV DVYGEDSATE+ +ITPWT+SVASGYSL+R+PH+NKGLAFSEKERD+HYLRGLLPPVVV+ DLQVKK+MN +R Y+VPLQ+Y+AMMD QE NERL+YKLL++NVEELLPIVYTPTVGEACQKYGSI RPQGLFISLKEKGKI EVLKNWPE+KIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLP+TIDVGTNNEDLLNDEFYIGLRQRRA GQEYAEL EFM AVKQNYGEKVLIQFEDFANHNAFDLLAKYG +HLVFNDDIQGTASVVLAG+MA+L+LVGGTLA+ FLFLGAGEAGTGIAELIALE+SKQT PLEETRKKI+++DSKGLIV SR+ESLQHFK+PWAHEHEP++ELV+AVK+IKPTVLIGSSG GRTFTK+VV+ +A+ NEKPIIFALSNPTSQSECTA+EAY+WS+GRAI+ASGSPF P+EYNGK+YASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALA +V+QENF+KGLI+PPFTNIRKISANIAAKVAAKAYELGLATRLP+P +LVAYAESCMYSP+YRSYR
Sbjct: 1 MFSLNGSSFTNNSLSGVSRCLTQSSRRGVSGPMVVAAAVNSNGKPGDRNVSVLVENSMKESAAAPVEKEIKSTVTGGVGDVYGEDSATEDQSITPWTLSVASGYSLLRNPHYNKGLAFSEKERDSHYLRGLLPPVVVNHDLQVKKMMNNLRQYEVPLQRYIAMMDIQEMNERLYYKLLMDNVEELLPIVYTPTVGEACQKYGSIFRRPQGLFISLKEKGKINEVLKNWPERKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPITIDVGTNNEDLLNDEFYIGLRQRRARGQEYAELFDEFMYAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTSHLVFNDDIQGTASVVLAGLMASLQLVGGTLAEHTFLFLGAGEAGTGIAELIALEMSKQTGIPLEETRKKIWMLDSKGLIVNSRMESLQHFKRPWAHEHEPVKELVNAVKSIKPTVLIGSSGAGRTFTKEVVQALATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAEQVSQENFEKGLIYPPFTNIRKISANIAAKVAAKAYELGLATRLPEPANLVAYAESCMYSPAYRSYR 642
BLAST of DCAR_016189 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3Q7JAV3 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1093.95 bits (2828), Expect = 0.000e+0
Identity = 526/642 (81.93%), Postives = 587/642 (91.43%), Query Frame = 0
Match: A0A3Q7JAV3 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1093.95 bits (2828), Expect = 0.000e+0
Identity = 526/642 (81.93%), Postives = 587/642 (91.43%), Query Frame = 0
Query: 1 MMSLNGSTFLYNPVIGVSRSYAQ--RRVSAPSVVVSSASSSN--ADRKATVLMETNL-KAPAALVIESDSKTSVGGGVEDVYGEDSATEEHNITPWTVSVASGYSLMRDPHHNKGLAFSEKERDAHYLRGLLPPVVVSQDLQVKKLMNCIRNYQVPLQKYMAMMDYQEHNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSILGRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEDLLNDEFYIGLRQRRATGQEYAELLHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYGATHLVFNDDIQGTASVVLAGIMAALKLVGGTLADQKFLFLGAGEAGTGIAELIALEISKQTNTPLEETRKKIFLVDSKGLIVKSRLESLQHFKKPWAHEHEPIRELVDAVKAIKPTVLIGSSGVGRTFTKDVVETMASLNEKPIIFALSNPTSQSECTAKEAYTWSKGRAIYASGSPFDPIEYNGKIYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAAEVTQENFDKGLIFPPFTNIRKISANIAAKVAAKAYELGLATRLPQPHDLVAYAESCMYSPSYRSYR 637
M SLNG++F N + GVSR Q RRVSAP VVV++ +S+ D +VL+E L ++PA +E + K++V GGV+DVYGEDSATE+ +ITPWT+SVASG+SL+R+PH+NKGLAFSE+ERD HYLRGLLPPVV+S DLQVKK+MN IR Y VPLQ+YMAMMD QE NERLFYKLLI+NVEELLPIVYTPTVGEACQKYGSI RPQGLFISLKEKGKI EVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNE+LLNDEFYIGLRQRRATGQEY+ELL EFM AVKQNYGEKVLIQFEDFANHNAFDLLAKYG +HLVFNDDIQGTASVVLAG+MAAL LVGG+L++ FLFLGAGEAGTGIAELIALE+SKQT PLEETRKKI++VDSKGLIVKSR+E LQHFK+PWAH+HEP++ELV+AVK+IKPTVLIGSSG GRTFTK+VV+ MA+ NEKPIIFALSNPTSQSECTA+EAY+WS+GRAI+ASGSPF P+EYNGK+YASGQANNAYIFPGFGLGLIISGAIRVHDDMLL ASEALA +V+QENF+KGLI+PPF+NIRKISA+IAAKVAAKAYELGLATRLPQP DLVAYAESCMYSP+YRSYR
Sbjct: 1 MFSLNGTSFTNNSLSGVSRCLNQSSRRVSAPMVVVAAVNSNGKPGDGSVSVLVENALTESPAP--VEMEVKSTVTGGVQDVYGEDSATEDQSITPWTLSVASGFSLLRNPHYNKGLAFSERERDTHYLRGLLPPVVISHDLQVKKMMNSIRKYDVPLQRYMAMMDLQEMNERLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIFRRPQGLFISLKEKGKIHEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNENLLNDEFYIGLRQRRATGQEYSELLDEFMYAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTSHLVFNDDIQGTASVVLAGLMAALNLVGGSLSEHTFLFLGAGEAGTGIAELIALEMSKQTGIPLEETRKKIWMVDSKGLIVKSRMEMLQHFKRPWAHDHEPVQELVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLVASEALAEQVSQENFEKGLIYPPFSNIRKISAHIAAKVAAKAYELGLATRLPQPKDLVAYAESCMYSPAYRSYR 640
BLAST of DCAR_016189 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6N2B399 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1092.8 bits (2825), Expect = 0.000e+0
Identity = 525/642 (81.78%), Postives = 586/642 (91.28%), Query Frame = 0
Match: A0A6N2B399 (Malic enzyme {ECO:0000256|RuleBase:RU003426})
HSP 1 Score: 1092.8 bits (2825), Expect = 0.000e+0
Identity = 525/642 (81.78%), Postives = 586/642 (91.28%), Query Frame = 0
Query: 1 MMSLNGSTFLYNPVIGVSRSYAQ--RRVSAPSVVVSSASSSN--ADRKATVLMETNL-KAPAALVIESDSKTSVGGGVEDVYGEDSATEEHNITPWTVSVASGYSLMRDPHHNKGLAFSEKERDAHYLRGLLPPVVVSQDLQVKKLMNCIRNYQVPLQKYMAMMDYQEHNERLFYKLLIENVEELLPIVYTPTVGEACQKYGSILGRPQGLFISLKEKGKILEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNEDLLNDEFYIGLRQRRATGQEYAELLHEFMSAVKQNYGEKVLIQFEDFANHNAFDLLAKYGATHLVFNDDIQGTASVVLAGIMAALKLVGGTLADQKFLFLGAGEAGTGIAELIALEISKQTNTPLEETRKKIFLVDSKGLIVKSRLESLQHFKKPWAHEHEPIRELVDAVKAIKPTVLIGSSGVGRTFTKDVVETMASLNEKPIIFALSNPTSQSECTAKEAYTWSKGRAIYASGSPFDPIEYNGKIYASGQANNAYIFPGFGLGLIISGAIRVHDDMLLAASEALAAEVTQENFDKGLIFPPFTNIRKISANIAAKVAAKAYELGLATRLPQPHDLVAYAESCMYSPSYRSYR 637
M SLNG++F N + GVSR Q RRVSAP VVV++ +S+ D +VL+E L ++PA +E + K++V GGV+DVYGEDSATE+ +ITPWT+SVASG+SL+R+PH+NKGLAFSE+ERD HYLRGLLPPVV+S DLQVKK+MN IR Y VPLQ+YMAMMD QE NERLFYKLLI+NVEELLPIVYTPTVGEACQKYGSI RPQGLFISLKEKGKI EVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNE+LLNDEFYIGLRQRRATGQEY+ELL EFM AVKQNYGEKVLIQFEDFANHNAFDLLAKYG +HLVFNDDIQGTASVVLAG+MAAL LVGG+L++ FLFLGAGEAGTGIAELIALE+SKQT PLEETRKKI++VDSKGLIVKSR+E LQHFK+PWAH+HEP++ELV+AVK+IKPTVLIGSSG GRTFTK+VV+ MA+ NEKPIIFALSNPTSQSECTA+EAY+WS+GRAI+ASGSPF P+EYNGK+YASGQANNAYIFPG GLGLIISGAIRVHDDMLL ASEALA +V+QENF+KGLI+PPF+NIRKISA+IAAKVAAKAYELGLATRLPQP DLVAYAESCMYSP+YRSYR
Sbjct: 1 MFSLNGTSFTNNSLSGVSRCLTQSSRRVSAPMVVVAAVNSNGKPGDGSVSVLVENALTESPAP--VEMEVKSTVTGGVQDVYGEDSATEDQSITPWTLSVASGFSLLRNPHYNKGLAFSERERDTHYLRGLLPPVVISHDLQVKKMMNSIRKYDVPLQRYMAMMDLQEMNERLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIFRRPQGLFISLKEKGKIHEVLKNWPEKKIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGIRPSACLPVTIDVGTNNENLLNDEFYIGLRQRRATGQEYSELLDEFMYAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTSHLVFNDDIQGTASVVLAGLMAALNLVGGSLSEHTFLFLGAGEAGTGIAELIALEMSKQTGIPLEETRKKIWMVDSKGLIVKSRMEMLQHFKRPWAHDHEPVQELVNAVKSIKPTVLIGSSGAGRTFTKEVVQAMATFNEKPIIFALSNPTSQSECTAEEAYSWSEGRAIFASGSPFAPVEYNGKVYASGQANNAYIFPGLGLGLIISGAIRVHDDMLLVASEALAEQVSQENFEKGLIYPPFSNIRKISAHIAAKVAAKAYELGLATRLPQPKDLVAYAESCMYSPAYRSYR 640
| Match Name | Stats | Description |
|---|---|---|
| A0A5J5BF85 | E-Value: 0.000e+0, PID: 83.78 | Malic enzyme {ECO:0000256|RuleBase:RU003426}[more] |
| A0A5B6ZKW9 | E-Value: 0.000e+0, PID: 84.91 | Malic enzyme {ECO:0000256|RuleBase:RU003426}[more] |
| M1CIA9 | E-Value: 0.000e+0, PID: 82.68 | Malic enzyme {ECO:0000256|RuleBase:RU003426}[more] |
| A0A1J6IUG1 | E-Value: 0.000e+0, PID: 81.62 | Malic enzyme {ECO:0000256|RuleBase:RU003426}[more] |
| A0A1S3Y729 | E-Value: 0.000e+0, PID: 81.62 | Malic enzyme {ECO:0000256|RuleBase:RU003426}[more] |
| A0A022S3G6 | E-Value: 0.000e+0, PID: 80.73 | Malic enzyme {ECO:0000256|RuleBase:RU003426}[more] |
| A0A1S4B4D7 | E-Value: 0.000e+0, PID: 81.46 | Malic enzyme {ECO:0000256|RuleBase:RU003426}[more] |
| A0A1U7WDN8 | E-Value: 0.000e+0, PID: 81.31 | Malic enzyme {ECO:0000256|RuleBase:RU003426}[more] |
| A0A3Q7JAV3 | E-Value: 0.000e+0, PID: 81.93 | Malic enzyme {ECO:0000256|RuleBase:RU003426}[more] |
| A0A6N2B399 | E-Value: 0.000e+0, PID: 81.78 | Malic enzyme {ECO:0000256|RuleBase:RU003426}[more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |