Resource Type:
Polypeptide
Name:
DCAR_018962
Identifier:
DCAR_018962.mRNA-protein
Sequence:
MPQNDNIRFISSSIKIPCETMPQKADIQFTLPSMKISSFRSSHYLRRKHH
HIISPFASVQFSNHNSVLQFIDSVKTPFTQLVDFVKTPFTQFVNSLQPSS
NIFNSTKNHSKRNPFHLKSLLLSSASLALTGPDEGSLMTPPKIGSQSASQ
NDEERVLISEVFVRNKDGEELERKDLENEAMTALKTCRPNSALTIHEVQE
DVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFRGLVCEGANALPS
KFVEDAFRGGYGKIVNIRRLNDVIDSINGWYMDRGLFGLVSGVEIFSGGI
IRLQVSEAEVNDISIRFRRKTGEPTVGKTRPETILRQLTTKKGQVYSMLQ
GKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERQSHGISAGGGI
SSGIANGPLAGLIGSCAIHHRNLFGRNQKLNLSLERGQVDSLFRLNYTDP
WIEGDDKRTSRSIMVQNSKTPGSLVYSQPDGNILTIGRVTAGIEYSRPFR
PNWSGTAGVTFQRAGARDDRGNPIIRDFYSSPLTASGNAYDKMLLAKLES
VYTGSGGPGSSMLVLNMEQGLPVWTEWLAFNRVTARARKGFVAGPVSFSF
GLSGGHMVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSHVVGSGEMSFPL
LKPLEGVVFADCGTDLGSASAVPGDPAGARLKPGNGYGYGVGVRLESPFG
PLRLEYALNDHGTGRFHFGVGYRN*
Sequence Length:
725
Sequence Checksum:
532c63147f8f977d61cc43b791ae4869
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_018962, derives from mRNA, DCAR_018962. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_018962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_018962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AWA5 (POTRA domain-containing protein {ECO:0000259|PROSITE:PS51779})
HSP 1 Score: 1011.52 bits (2614), Expect = 0.000e+0
Identity = 513/732 (70.08%), Postives = 576/732 (78.69%), Query Frame = 0
Match: A0A5B7AWA5 (POTRA domain-containing protein {ECO:0000259|PROSITE:PS51779})
HSP 1 Score: 1011.52 bits (2614), Expect = 0.000e+0
Identity = 513/732 (70.08%), Postives = 576/732 (78.69%), Query Frame = 0
Query: 1 MPQNDNIRFISSSIKIPCETMPQKADIQFTLPSMKISSFRSSHYLRRKHHHIISPFASVQFSNHNSVLQFIDSVKTPFTQLVDFVKTPFTQFVNSLQPSSNIFNSTKNHSKRNPFHLKSLLLSSASLALTGPDE---GSL---MTPPKIGSQSASQNDEERVLISEVFVRNKDGEELERKDLENEAMTALKTCRPNSALTIHEVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFRGLVCEGANALPSKFVEDAFRGGYGKIVNIRRLNDVIDSINGWYMDRGLFGLVSGVEIFSGGIIRLQVSEAEVNDISIRFR-RKTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERQSHGISAGGGISSGIANGPLAGLIGSCAIHHRNLFGRNQKLNLSLERGQVDSLFRLNYTDPWIEGDDKRTSRSIMVQNSKTPGSLVY-SQPDGNILTIGRVTAGIEYSRPFRPNWSGTAGVTFQRAGARDDRGNPIIRDFYSSPLTASGNAYDKMLLAKLESVYTGSGGPGSSMLVLNMEQGLPVWTEWLAFNRVTARARKGFVAGPVSFSFGLSGGHMVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSHVVGSGEMSFPLLKPLEGVVFADCGTDLGSASAVPGDPAGARLKPGNGYGYGVGVRLESPFGPLRLEYALNDHGTGRFHFGVGYRN 724
MP+ND +RF SSSIK+P + +P FSN Q + S +D QFV S + + H + NPFH KS LL SASLALT PDE G+L ++ PK G SA ++DEERVLISEV VRNKDGEELERKDLENEA+ ALK CRPNSALT+ EVQEDVHRII SGYF SCMPVAVDTRDGIRLVFQVEPNQEF+GLVCEGAN LP+KF+E+AFR GYGK+VNIR L +VIDSINGWYM+RGLFG+VS VEI SGGIIRLQVSEAEVN+IS RF RKTGEPTVGKT+PETILRQLTTK+GQVYSMLQGKRDV+T+LTMGIMEDVSIVPQPAGDTGKVDLTMNVVER S G+SAGGGISSGI +GPL+GLIGS A HRN+FGRNQK N+SLERGQ+DS+FR+NYTDPWIEGDDKRTSRSIM+QNS+TPG+LV+ SQPD + LTIGR+T+GIE+SRPFRP WSGTAG+ FQ AGARDD+G PII+DFY+SPLTASGN +D ML+AK ESVYTGSG PGSSM V NMEQGLPV EWL FNRV ARARKG GP LSGGH+VGNF PHEAF IGGTNSVRGYEEGA+GSGRS+VVG GE+SFPLL P+EG +FAD GTDLGS VPGDPAGARLKPG+GYGYG+GVR++SP GPLRLEYA ND GRFHF VG+RN
Sbjct: 1 MPENDGVRFTSSSIKVPLSPLHHHHHHHHPIP---------------------------LFSNLQLCSQTLSSTLAKTKDSID-------QFVKSFK--------VEFHKRINPFHAKSSLLCSASLALTRPDESTQGTLEVAVSQPK-GGHSAGRHDEERVLISEVLVRNKDGEELERKDLENEAVAALKACRPNSALTVREVQEDVHRIINSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFQGLVCEGANVLPTKFIEEAFRDGYGKVVNIRHLGEVIDSINGWYMERGLFGMVSDVEILSGGIIRLQVSEAEVNNISTRFLGRKTGEPTVGKTKPETILRQLTTKRGQVYSMLQGKRDVETLLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERVSGGLSAGGGISSGITSGPLSGLIGSLAFSHRNVFGRNQKFNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMIQNSRTPGTLVHGSQPDNSSLTIGRITSGIEFSRPFRPKWSGTAGIIFQHAGARDDKGFPIIKDFYNSPLTASGNTHDDMLVAKFESVYTGSGDPGSSMFVFNMEQGLPVLPEWLFFNRVNARARKGLEIGPACLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGCGEISFPLLGPIEGAIFADYGTDLGSGPTVPGDPAGARLKPGSGYGYGLGVRVDSPLGPLRLEYAFNDRQAGRFHFAVGHRN 689
BLAST of DCAR_018962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6P855 ((Outer envelope protein {ECO:0000313|EMBL:PSR86836.1}))
HSP 1 Score: 1008.05 bits (2605), Expect = 0.000e+0
Identity = 515/739 (69.69%), Postives = 589/739 (79.70%), Query Frame = 0
Match: A0A2R6P855 ((Outer envelope protein {ECO:0000313|EMBL:PSR86836.1}))
HSP 1 Score: 1008.05 bits (2605), Expect = 0.000e+0
Identity = 515/739 (69.69%), Postives = 589/739 (79.70%), Query Frame = 0
Query: 1 MPQNDNIRFISSSIKIPCETMPQK-----------ADIQFTLPSMKISSFRSS--HYLRRKHHHIISPFASVQFSNHNSVLQFIDSVKTPFTQLVDFVKTPFTQFVNSLQPSSNIFNSTKNHSKRNPFHLKSLLLSSASLALTGPDEGSLMTPPKIGSQSASQNDEERVLISEVFVRNKDGEELERKDLENEAMTALKTCRPNSALTIHEVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFRGLVCEGANALPSKFVEDAFRGGYGKIVNIRRLNDVIDSINGWYMDRGLFGLVSGVEIFSGGIIRLQVSEAEVNDISIRF-RRKTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERQSHGISAGGGISSGIANGPLAGLIGSCAIHHRNLFGRNQKLNLSLERGQVDSLFRLNYTDPWIEGDDKRTSRSIMVQNSKTPGSLVY-SQPDGNILTIGRVTAGIEYSRPFRPNWSGTAGVTFQRAGARDDRGNPIIRDFYSSPLTASGNAYDKMLLAKLESVYTGSGGPGSSMLVLNMEQGLPVWTEWLAFNRVTARARKGFVAGPVSFSFGLSGGHMVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSHVVGSGEMSFPLLKPLEGVVFADCGTDLGSASAVPGDPAGARLKPGNGYGYGVGVRLESPFGPLRLEYALNDHGTGRFHFGVGYRN 724
MP+N+ +RF SSS+++P P +++QFT ++ I+S +SS +L++ + L +++T + + QFV + + + F HS+ + KS LL SASLALT PDE +++ PK G EERVLISEVFVRNKDGEELERKDLENEA+ ALK CRPNSALT+ EVQEDVHRII SGYF SCMPVAVDTRDGIRLVFQVEPNQEF+GLVCEGAN LP+KF+ED+FR GYGK++NIRRL++VIDSINGWYM++GLFGLVSGVEI SGGIIRLQVSEAEVN+ISIRF RKTGEPTVGKT+PETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVER S G SAGGGISSGI +GPL+GLIGS A HRN+FGRNQKLN+SLERGQ+DS+FR+NYTDPWIEGDDKRTSRSIM+QNS+TPG+LV+ +QPD + LTIGRVTAG+E+SRPFRP WSGT G+ FQ AGARDDRGNPII+DFYSSPLTASGN +D LLAK ESVYTGSG PGSSM V NMEQGLPV EWL FNRV ARARKG GP F LSGGH+VGNF PHEAF IGGTNSVRGYEEGA+G+GRS+VVGSGE++FPL P+EG +FAD GTDLGS VPGDPAGARLKPG+GYGYG GVR++SP GPLRLEYA ND GRFHFGVG+RN
Sbjct: 1 MPRNEGVRFTSSSLRVPLSPPPPPHHHHRHHLPLFSNLQFTSQTL-IASTQSSIDQFLKK-------------IQKNPRKLHKPQNIQTLIASSLARTQFAIDQFVKNFKKTHKRF----QHSR---YLSKSSLLCSASLALTKPDESAVVAQPKGG------GSEERVLISEVFVRNKDGEELERKDLENEALAALKACRPNSALTVREVQEDVHRIISSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFQGLVCEGANVLPAKFIEDSFRDGYGKVINIRRLDEVIDSINGWYMEQGLFGLVSGVEILSGGIIRLQVSEAEVNNISIRFLDRKTGEPTVGKTKPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERVSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMIQNSRTPGTLVHGNQPDNSSLTIGRVTAGLEFSRPFRPKWSGTTGLIFQHAGARDDRGNPIIKDFYSSPLTASGNTHDDTLLAKFESVYTGSGDPGSSMFVFNMEQGLPVLPEWLFFNRVNARARKGLDIGPARFLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGAGRSYVVGSGEIAFPLSGPVEGALFADYGTDLGSGPTVPGDPAGARLKPGSGYGYGFGVRVDSPLGPLRLEYAFNDKKAGRFHFGVGHRN 712
BLAST of DCAR_018962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834G245 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7121254.1}))
HSP 1 Score: 1003.43 bits (2593), Expect = 0.000e+0
Identity = 517/755 (68.48%), Postives = 585/755 (77.48%), Query Frame = 0
Match: A0A834G245 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7121254.1}))
HSP 1 Score: 1003.43 bits (2593), Expect = 0.000e+0
Identity = 517/755 (68.48%), Postives = 585/755 (77.48%), Query Frame = 0
Query: 1 MPQNDNIRFISSSIKIPCETMPQKADIQFTLPSMKISSFRSSHYLRRKHHHIISP--FASVQFSNHNSVLQFIDSVKTPFTQLVDFVKTPFTQFVNSLQPSSNIFNSTKNHSKRNPFHLKSLLLSSASLALTGPDE----GSLMTPPKIG-SQSASQNDEERVLISEVFVRNKDGEELERKDLENEAMTALKTCRPNSALTIHEVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFRGLVCEGANALPSKFVEDAFRGGY----------------------GKIVNIRRLNDVIDSINGWYMDRGLFGLVSGVEIFSGGIIRLQVSEAEVNDISIRF-RRKTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERQSHGISAGGGISSGIANGPLAGLIGSCAIHHRNLFGRNQKLNLSLERGQVDSLFRLNYTDPWIEGDDKRTSRSIMVQNSKTPGSLVY-SQPDGNILTIGRVTAGIEYSRPFRPNWSGTAGVTFQRAGARDDRGNPIIRDFYSSPLTASGNAYDKMLLAKLESVYTGSGGPGSSMLVLNMEQGLPVWTEWLAFNRVTARARKGFVAGPVSFSFGLSGGHMVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSHVVGSGEMSFPLLKPLEGVVFADCGTDLGSASAVPGDPAGARLKPGNGYGYGVGVRLESPFGPLRLEYALNDHGTGRFHFGVGYRN 724
MP+ND +RF SSS++IP + SH+ HH SP F + QF+ + + K+ Q FVK FNS K + +PF KS LL SASLALT PDE +++ PK G S +A +++EERVLISEVFVRNKDGEELERKDLENEA+ ALK CRPNSALT+ EVQEDVHRII SGYF SCMPVA+DTRDGIRLVFQVEPNQEF+GLVCEGAN LP+KF+ED+FR GY GK+VNIRRL++VIDSINGWYM+RGLFGLVSGVEI SGG+IRLQVSEAEVN+ISIRF RKTGEPTVGKT+PETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSI+PQPAGDTGKVDLTMNVVER S G SAGGGISSGI +GPL+GLIGS A HRN+FGRNQKLN+SLERGQ+DS+FR+NYTDPWIEGDDKRTSRSIM+QNS+TPG+LV+ +QP + LTIGRV+AGIE+SRPFRP WSGTAG+ FQRAGARDD+GNPII+DFYSSPLTASGN +D L AK ESVYTGSG PGSSM V NMEQGLP+ EWL FNR+ ARARKG GP+ F SGGH+VGNF PHEAF IGGTNSVR YEEGA+GSGRS+ VGSGE++FPLL P+EG VFAD GTDLGS VPGDPAGARLKPG+GYGYG G+R++SP GPLRLEYA ND GRFHFGVG+RN
Sbjct: 1 MPKNDTVRFTSSSLRIPLSPL--------------------SHH----HHRKQSPPLFPTFQFNPQTLISSALARTKSTIDQ---FVKN---------------FNSQK---RTHPFLFKSSLLCSASLALTKPDEQASSDAVVAQPKGGHSAAAGRHEEERVLISEVFVRNKDGEELERKDLENEAVAALKACRPNSALTVREVQEDVHRIISSGYFCSCMPVAIDTRDGIRLVFQVEPNQEFQGLVCEGANVLPAKFIEDSFRDGYGSPCLTTADRRPILLILVSSYAGKVVNIRRLDEVIDSINGWYMERGLFGLVSGVEILSGGVIRLQVSEAEVNNISIRFLDRKTGEPTVGKTKPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIIPQPAGDTGKVDLTMNVVERVSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMIQNSRTPGTLVHGNQPGDSNLTIGRVSAGIEFSRPFRPKWSGTAGLIFQRAGARDDKGNPIIKDFYSSPLTASGNTHDDTLFAKFESVYTGSGDPGSSMFVFNMEQGLPILPEWLFFNRLNARARKGLDIGPLRFLLSFSGGHVVGNFSPHEAFAIGGTNSVRSYEEGAVGSGRSYAVGSGEIAFPLLGPVEGAVFADYGTDLGSGPTVPGDPAGARLKPGSGYGYGFGMRVDSPLGPLRLEYAFNDKKAGRFHFGVGHRN 710
BLAST of DCAR_018962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A103XHH3 ((Bacterial surface antigen (D15) {ECO:0000313|EMBL:KVH90808.1}) (Fragment))
HSP 1 Score: 997.268 bits (2577), Expect = 0.000e+0
Identity = 511/721 (70.87%), Postives = 586/721 (81.28%), Query Frame = 0
Match: A0A103XHH3 ((Bacterial surface antigen (D15) {ECO:0000313|EMBL:KVH90808.1}) (Fragment))
HSP 1 Score: 997.268 bits (2577), Expect = 0.000e+0
Identity = 511/721 (70.87%), Postives = 586/721 (81.28%), Query Frame = 0
Query: 8 RFISSSIKIPCETMPQKADIQFTLPSMKISSFRSSHYLRRKHHHIISPFASVQFSNHNSVLQFIDSVKTPFTQLVDFVKTPFTQFVNSLQPSSNIFNSTKNHSKR--NPFHLKSLL-LSSASLALTGPDEGSLMTPPKIGSQSASQNDEERVLISEVFVRNKDGEELERKDLENEAMTALKTCRPNSALTIHEVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFRGLVCEGANALPSKFVEDAFRGGYGKIVNIRRLNDVIDSINGWYMDRGLFGLVSGVEIFSGGIIRLQVSEAEVNDISIRFRRKTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERQSHGISAGGGISSGIANGPLAGLIGSCAIHHRNLFGRNQKLNLSLERGQVDSLFRLNYTDPWIEGDDKRTSRSIMVQNSKTPGSLVY-SQPDGNILTIGRVTAGIEYSRPFRPNWSGTAGVTFQRAGARDDRGNPIIRDFYSSPLTASGNAYDKMLLAKLESVYTGSGGPGSSMLVLNMEQGLPVWTEWLAFNRVTARARKGFVAGPVSFSFGLSGGHMVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSHVVGSGEMSFPLLKPLEGVVFADCGTDLGSASAVPGDPAGARLKPGNGYGYGVGVRLESPFGPLRLEYALNDHGTGRFHFGVGYRN 724
R + S + P TMP+ + F S+KI F H RR+HH N + F D + + +++ K P TQF++ + N F ++ + NPFH K L S SLAL DE S S++D+ERVLISEV VRNKDGEELERKDLE EAM ALKTCRPNSALT+ EVQEDVHRIIGSGYFS+CMPVAVDTRDGIRLVF+VEPNQ+F+GLVCEGAN LP+KFVEDAFR GYGKIVNIRRL++VI+SINGWYM+RGLFGLVSG+EI SGGIIRLQVSEAEVN+IS+RF R+TGE T GKTRPETILRQL TKKGQVYSMLQ KRDVDT+L MGIMEDVSIVPQPAGD+GKVDLT+N VER S GISAGGGISSGI +GPLAGLIGSCA++HRNLFGRNQK+NLSLERGQ+DS+FR+NYTDPWIEGDDKRTSR+IM+QNS+TPG+LV+ +QP+ + LTIGR+TAGIEYSRPFRP WSGTAG+ FQRAGARD++GNPIIRDF+SSPLTASGN +D M+L KLESVYTGS P SSMLV+NMEQGLPVW++WL FNRVT+RARKG V GP + LSGGH+VGNFPPHEAFPIGGTNSVRGYEEGAIGSGRS+ VG GE+SFPL+ P+EG +FAD GTDLGS S VPGDPAGARLKPG+GYGYGVG+R+ SP GPLRLEYA +D GTGRFHF VG RN
Sbjct: 27 RRLESIVTPPITTMPENKHLHFRSSSIKIPPFFPIHNHRRQHH------------NRRPLPLFADLNLS-ISSILNSSKHPITQFISYI----NKFQASTQKLPKLSNPFHSKKQPPLCSTSLALIRGDEEVGEVTQSSKSHPVSRHDDERVLISEVLVRNKDGEELERKDLEEEAMAALKTCRPNSALTVQEVQEDVHRIIGSGYFSTCMPVAVDTRDGIRLVFEVEPNQDFQGLVCEGANVLPTKFVEDAFRDGYGKIVNIRRLDEVINSINGWYMERGLFGLVSGIEILSGGIIRLQVSEAEVNNISVRFLRRTGEQTTGKTRPETILRQLNTKKGQVYSMLQAKRDVDTLLAMGIMEDVSIVPQPAGDSGKVDLTINAVERVSGGISAGGGISSGITSGPLAGLIGSCALYHRNLFGRNQKINLSLERGQIDSIFRINYTDPWIEGDDKRTSRAIMIQNSRTPGTLVHGNQPNNSNLTIGRITAGIEYSRPFRPKWSGTAGLIFQRAGARDEKGNPIIRDFHSSPLTASGNIHDDMVLGKLESVYTGSSDPSSSMLVVNMEQGLPVWSDWLVFNRVTSRARKGLVIGPACLNLSLSGGHVVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSYAVGCGEISFPLVGPVEGAMFADYGTDLGSGSTVPGDPAGARLKPGSGYGYGVGMRVASPLGPLRLEYAFSDQGTGRFHFAVGQRN 730
BLAST of DCAR_018962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2J6KPH0 (POTRA domain-containing protein {ECO:0000259|PROSITE:PS51779})
HSP 1 Score: 995.727 bits (2573), Expect = 0.000e+0
Identity = 519/726 (71.49%), Postives = 588/726 (80.99%), Query Frame = 0
Match: A0A2J6KPH0 (POTRA domain-containing protein {ECO:0000259|PROSITE:PS51779})
HSP 1 Score: 995.727 bits (2573), Expect = 0.000e+0
Identity = 519/726 (71.49%), Postives = 588/726 (80.99%), Query Frame = 0
Query: 1 MPQNDNIRFISSSIKIPCETMPQKADIQFTLPSMKISSFRSSHYLRRKHHHIISPFASVQFSNHNSVLQFIDSVKTPFTQLVDFVKTPFTQFVNSLQPSSNIFNSTKNHSKRNPFHLKSL-LLSSASLALTGPDEGSLMTPPKIGSQSASQNDEERVLISEVFVRNKDGEELERKDLENEAMTALKTCRPNSALTIHEVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFRGLVCEGANALPSKFVEDAFRGGYGKIVNIRRLNDVIDSINGWYMDRGLFGLVSGVEIFSGGIIRLQVSEAEVNDISIRFRRKTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERQSHGISAGGGISSGIANGPLAGLIGSCAIHHRNLFGRNQKLNLSLERGQVDSLFRLNYTDPWIEGDDKRTSRSIMVQNSKTPGSLVY-SQPDGNILTIGRVTAGIEYSRPFRPNWSGTAGVTFQRAGARDDRGNPIIRDFYSSPLTASGNAYDKMLLAKLESVYTGSGGPGSSMLVLNMEQGLPVWTEWLAFNRVTARARKGFVAGPVSFSFGLSGGHMVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSHVVGSGEMSFPLLKPLEGVVFADCGTDLGSASAVPGDPAGARLKPGNGYGYGVGVRLESPFGPLRLEYALNDHGTGRFHFGVGYRN 724
MP+N +I+F SSSIKIP P + I R H+ H + FA + H S+ +++ K TQ F+ + ++F QPS+ K NPFH K LL SASLAL DE S S S++D+ERVLISEV VRNKDGEELERKDLE EA+ ALKTCRPNSALT EVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQ+F+GLVCEGAN LP+KFVED FR GYGKIVNIR+L+ VI+SINGWYM+RGLFGLVSG+EI SGGIIRLQVSEAEVN+IS+RF R+TGEPT GKTRPETILRQL TKKGQVYSMLQ KRDVDT+L MGIMEDVSIVPQPAGD+GKVDLT+N VER S GISAGGGISSGI +GPLAGLIGSCA++HRNLFGRNQK+NLSLERGQ+DS+FR+NYTDPWIEGDDKRTSR+IMVQNS+TPG+LV+ +QP+ LTIGR+TAGIEYSRPFRP WSGTAG+ FQRAGARD++GNP+IRD++SSPLTASGN +D M+LAKLE+VYTGS P SSMLV+NMEQGLPVW+EWL FNRVT RARKG GP S + LSGGH+VGNFPPHEAFPIGGTNSVRGYEEGAIGSGRS+ VG GE+SFPL+ P+EG +FAD GTDLGS VPGDPAGARLKPG+GYGYGVG+R+ SP GPLRLEYA ND GTGRFHFGVG RN
Sbjct: 1 MPENKSIQFRSSSIKIP--------------PFVPIHHHRHQHHHHHHHRRSLPLFADL----HLSISSILNNSKHSLTQ---FISSSISKF----QPSTQ-----KPPKPSNPFHSKKPPLLCSASLALARVDEEGGEVTQSSKSHSVSRHDDERVLISEVLVRNKDGEELERKDLEAEAIAALKTCRPNSALTTREVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQDFQGLVCEGANVLPTKFVEDKFRDGYGKIVNIRQLDHVINSINGWYMERGLFGLVSGIEILSGGIIRLQVSEAEVNNISVRFLRRTGEPTTGKTRPETILRQLNTKKGQVYSMLQAKRDVDTLLAMGIMEDVSIVPQPAGDSGKVDLTINAVERVSGGISAGGGISSGITSGPLAGLIGSCALYHRNLFGRNQKINLSLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTLVHGNQPNNTNLTIGRITAGIEYSRPFRPKWSGTAGLIFQRAGARDEKGNPMIRDYHSSPLTASGNIHDDMVLAKLETVYTGSSDPSSSMLVVNMEQGLPVWSEWLVFNRVTGRARKGLAIGPASLNLSLSGGHVVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSYAVGCGEISFPLVGPVEGAMFADYGTDLGSGPTVPGDPAGARLKPGSGYGYGVGMRVASPLGPLRLEYAFNDQGTGRFHFGVGQRN 696
BLAST of DCAR_018962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6S7NV65 (POTRA domain-containing protein {ECO:0000259|PROSITE:PS51779})
HSP 1 Score: 993.801 bits (2568), Expect = 0.000e+0
Identity = 517/726 (71.21%), Postives = 587/726 (80.85%), Query Frame = 0
Match: A0A6S7NV65 (POTRA domain-containing protein {ECO:0000259|PROSITE:PS51779})
HSP 1 Score: 993.801 bits (2568), Expect = 0.000e+0
Identity = 517/726 (71.21%), Postives = 587/726 (80.85%), Query Frame = 0
Query: 1 MPQNDNIRFISSSIKIPCETMPQKADIQFTLPSMKISSFRSSHYLRRKHHHIISPFASVQFSNHNSVLQFIDSVKTPFTQLVDFVKTPFTQFVNSLQPSSNIFNSTKNHSKRNPFHLKSL-LLSSASLALTGPDEGSLMTPPKIGSQSASQNDEERVLISEVFVRNKDGEELERKDLENEAMTALKTCRPNSALTIHEVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFRGLVCEGANALPSKFVEDAFRGGYGKIVNIRRLNDVIDSINGWYMDRGLFGLVSGVEIFSGGIIRLQVSEAEVNDISIRFRRKTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERQSHGISAGGGISSGIANGPLAGLIGSCAIHHRNLFGRNQKLNLSLERGQVDSLFRLNYTDPWIEGDDKRTSRSIMVQNSKTPGSLVY-SQPDGNILTIGRVTAGIEYSRPFRPNWSGTAGVTFQRAGARDDRGNPIIRDFYSSPLTASGNAYDKMLLAKLESVYTGSGGPGSSMLVLNMEQGLPVWTEWLAFNRVTARARKGFVAGPVSFSFGLSGGHMVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSHVVGSGEMSFPLLKPLEGVVFADCGTDLGSASAVPGDPAGARLKPGNGYGYGVGVRLESPFGPLRLEYALNDHGTGRFHFGVGYRN 724
MP+N +I+F SSSIKIP P + I R H+ + + FA + H S+ +++ K TQ + + +N QPS+ K NP+H K LL SASLALT DE S S S++D+ERVLISEV VRNKDGEELERKDLE EA+ ALKTCRPNSALT EVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQ+F+GLVCEGAN LP+KFVED FR GYGKIVNIR+L+ VI+SINGWYM+RGLFGLVSG+EI SGGIIRLQVSEAEVN+IS+RF R+TGEPT GKTRPETILRQL TKKGQVYSMLQ KRDVDT+L MGIMEDVSIVPQPAGD+GKVDLT+N VER S GISAGGGISSGI +GPLAGLIGSCA++HRNLFGRNQK+NLSLERGQ+DS+FR+NYTDPWIEGDDKRTSR+IMVQNS+TPG+LV+ +QP+ LTIGR+TAGIEYSRPFRP WSGTAG+ FQRAGARD++GNP+IRD++SSPLTASGN +D M+LAKLE+VYTGS P SSMLV+NMEQGLPVW+EWL FNRVT RARKG GP S + LSGGH+VGNFPPHEAFPIGGTNSVRGYEEGAIGSGRS+ VG GE+SFPL+ P+EG +FAD GTDLGS VPGDPAGARLKPG+GYGYGVG+R+ SP GPLRLEYA ND GTGRFHFGVG RN
Sbjct: 1 MPENKSIQFRSSSIKIP--------------PFVPIHHHRHQHHHHHRRP--LPLFADL----HLSISSILNNSKHSLTQFI-------SSSINKFQPSTQ-----KPPKPSNPYHSKKPPLLCSASLALTRVDEEGGEVTQSSKSHSVSRHDDERVLISEVLVRNKDGEELERKDLEAEAIAALKTCRPNSALTTREVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQDFQGLVCEGANVLPTKFVEDKFRDGYGKIVNIRQLDHVINSINGWYMERGLFGLVSGIEILSGGIIRLQVSEAEVNNISVRFLRRTGEPTTGKTRPETILRQLNTKKGQVYSMLQAKRDVDTLLAMGIMEDVSIVPQPAGDSGKVDLTINAVERVSGGISAGGGISSGITSGPLAGLIGSCALYHRNLFGRNQKINLSLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTLVHGNQPNNTNLTIGRITAGIEYSRPFRPKWSGTAGLIFQRAGARDEKGNPMIRDYHSSPLTASGNIHDDMVLAKLETVYTGSSDPSSSMLVVNMEQGLPVWSEWLVFNRVTCRARKGLAIGPASLNLSLSGGHVVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSYAVGCGEISFPLVGPVEGAMFADYGTDLGSGPTVPGDPAGARLKPGSGYGYGVGMRVASPLGPLRLEYAFNDQGTGRFHFGVGQRN 694
BLAST of DCAR_018962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5AB16 (POTRA domain-containing protein {ECO:0000259|PROSITE:PS51779})
HSP 1 Score: 989.949 bits (2558), Expect = 0.000e+0
Identity = 513/732 (70.08%), Postives = 583/732 (79.64%), Query Frame = 0
Match: A0A5J5AB16 (POTRA domain-containing protein {ECO:0000259|PROSITE:PS51779})
HSP 1 Score: 989.949 bits (2558), Expect = 0.000e+0
Identity = 513/732 (70.08%), Postives = 583/732 (79.64%), Query Frame = 0
Query: 1 MPQNDNIRFISSSIKIPCETMPQKADIQFTLPSMKISSFRSSHYLRRKHHHIISPFASVQFSNHNSVLQFIDSVKTPFTQLVDFVKTPFTQFVNSLQPSSNIFNSTKNHSKRNPFHLKSLLLSSASLALTGPDE---GSL---MTPPKIGSQSASQNDEERVLISEVFVRNKDGEELERKDLENEAMTALKTCRPNSALTIHEVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFRGLVCEGANALPSKFVEDAFRGGYGKIVNIRRLNDVIDSINGWYMDRGLFGLVSGVEIFSGGIIRLQVSEAEVNDISIRF-RRKTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERQSHGISAGGGISSGIANGPLAGLIGSCAIHHRNLFGRNQKLNLSLERGQVDSLFRLNYTDPWIEGDDKRTSRSIMVQNSKTPGSLVY-SQPDGNILTIGRVTAGIEYSRPFRPNWSGTAGVTFQRAGARDDRGNPIIRDFYSSPLTASGNAYDKMLLAKLESVYTGSGGPGSSMLVLNMEQGLPVWTEWLAFNRVTARARKGFVAGPVSFSFGLSGGHMVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSHVVGSGEMSFPLLKPLEGVVFADCGTDLGSASAVPGDPAGARLKPGNGYGYGVGVRLESPFGPLRLEYALNDHGTGRFHFGVGYRN 724
MP+ND +RF SSIK+P + HHH I F+++Q + ++ T T+ K QF+ S + K H++ NPF KS LL SASLALT PDE G+L ++ PK G SA ++DEERVLISEV VRNKDGEELERKDLENEA+ ALK CRPNSALT+ EVQEDVHRII SGYF SCMPVAVDTRDGIRLVFQVEPNQEF+GL CEGAN LP+KFVE+AFR GYGK+VNIRRL +V+DSINGWYM+RGLFG+VS VEI SGGII+LQVSEAEVN+ISIRF RKTGEPTVGKT+PETI+RQLTTK+GQVYSMLQGKRDV+T+LTMGIMEDVSIVPQPAGDTGKVDLT+NVVER S G+SAGGGISSGI +GPL+GLIGS A HRN+FGRNQK N+SLERGQ+DS+FR+NYTDPWIEGDDKRTSRSIM+QNS+TPG+LV+ +QPD + LTIGRVTAGIE+SRPFRP WSGTAG+ FQ AGARDD+GNPII+DFY+SPLTASGN +D ML+AK ESVYTGSG PGSSM V N+EQGLPV EWL FNRV ARARKG GP LSGGH+VGNF PHEAF IGGTNSVRGYEEGA+GSGRS+VVG GE+SFPLL P+EG +FAD GTDLGS VPGDPAGARLKPG+GYGYGVGVR++SP GPLRLEYA ND GRFHF VG+RN
Sbjct: 1 MPENDGVRFTFSSIKVPLSPL--------------------------HHHHPIPLFSNLQLCSQ--------TLSTTLTR----TKDSLDQFIKSFK--------IKIHNRINPFPAKSSLLCSASLALTRPDESTQGALEVAVSQPK-GGHSAGRHDEERVLISEVLVRNKDGEELERKDLENEAVAALKACRPNSALTVREVQEDVHRIINSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFQGLTCEGANVLPTKFVEEAFRDGYGKVVNIRRLGEVVDSINGWYMERGLFGMVSDVEILSGGIIKLQVSEAEVNNISIRFLDRKTGEPTVGKTKPETIVRQLTTKRGQVYSMLQGKRDVETLLTMGIMEDVSIVPQPAGDTGKVDLTINVVERVSGGLSAGGGISSGITSGPLSGLIGSLAFSHRNVFGRNQKFNVSLERGQIDSIFRINYTDPWIEGDDKRTSRSIMIQNSRTPGTLVHGNQPDNSSLTIGRVTAGIEFSRPFRPKWSGTAGLIFQHAGARDDKGNPIIKDFYNSPLTASGNTHDDMLVAKFESVYTGSGDPGSSMFVFNVEQGLPVLPEWLFFNRVNARARKGLEIGPACLLLSLSGGHVVGNFSPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGCGEISFPLLGPVEGAIFADYGTDLGSGPTVPGDPAGARLKPGSGYGYGVGVRVDSPLGPLRLEYAFNDKQAGRFHFAVGHRN 685
BLAST of DCAR_018962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3Q7IKG4 (Calcium-transporting ATPase {ECO:0000256|RuleBase:RU361146} (7.2.2.10 {ECO:0000256|RuleBase:RU361146}))
HSP 1 Score: 985.712 bits (2547), Expect = 0.000e+0
Identity = 507/737 (68.79%), Postives = 587/737 (79.65%), Query Frame = 0
Match: A0A3Q7IKG4 (Calcium-transporting ATPase {ECO:0000256|RuleBase:RU361146} (7.2.2.10 {ECO:0000256|RuleBase:RU361146}))
HSP 1 Score: 985.712 bits (2547), Expect = 0.000e+0
Identity = 507/737 (68.79%), Postives = 587/737 (79.65%), Query Frame = 0
Query: 1 MPQNDNIRFISSSIKIPCETMPQKADIQFTLPSMKISSFRSSHYLRRKHHHIISPFASVQFSNHNSVLQFIDSVKTPFTQLVD----FVKT------PFTQFVNSLQPSSNIFNSTKNHSKRNPFHLK--SLLLSSASLALTGPDEGSLMTPPKIGSQSASQNDEERVLISEVFVRNKDGEELERKDLENEAMTALKTCRPNSALTIHEVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFRGLVCEGANALPSKFVEDAFRGGYGKIVNIRRLNDVIDSINGWYMDRGLFGLVSGVEIFSGGIIRLQVSEAEVNDISIRFRRKTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERQ-SHGISAGGGISSGIANGPLAGLIGSCAIHHRNLFGRNQKLNLSLERGQVDSLFRLNYTDPWIEGDDKRTSRSIMVQNSKTPGSLVYSQPDGNILTIGRVTAGIEYSRPFRPNWSGTAGVTFQRAGARDDRGNPIIRDFYSSPLTASGNAYDKMLLAKLESVYTGSGGPGSSMLVLNMEQGLPVWTEWLAFNRVTARARKGFVAGPVSFSFGLSGGHMVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSHVVGSGEMSFPLLKPLEGVVFADCGTDLGSASAVPGDPAGARLKPGNGYGYGVGVRLESPFGPLRLEYALNDHGTGRFHFGVGYRN 724
M QN+++RF SSSIK+P F+ P + HHH +PF F+N + V+Q PF Q ++ F++T PF Q N P + I + P+ L S LL AS+AL+ + + P +G+++ S N EERVLISEV VR+KDGEELERKDLENE + ALK CRPNSALT+ EVQEDVHRII SGYF SCMPVAVDTRDGIRLVFQVEPNQEF GLVCEGAN LP+KF+ED+FR GYGKIVNI+R++++I SINGWYM+RGLFG VSGVE+ SGG+IRL+VSEAEVN+I+IRF KTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDV+TVL MGIMEDVSI+PQP+GDTGKVDL MNVVER+ GISAGGGISSGI +GPLAGLIGSCAI+H+NLFGRNQKLNLSLERGQVDS+FR+NYTDPWIEGDDKRTSRSIM+QNS+TPG+LV++QPDG+ LTIGRVTAGIEYSRPFRP W+GTAG+ FQRAGARDD+G+PIIRD+YSSPLTASGN +D MLLAKLE+VYTGSG PGSS+ V NM+QGLPVW++WL FNRV ARARKG GP+ SGGH+VGNFPPHEAF IGGTNSVRGYEEGA+GS RS+VVG GE+SFPL P+EG VFAD G+DLGS +VPGDPAG R KPG+GYG GVG+R++SP GPLRLEYA ND TGRFHFGVG RN
Sbjct: 986 MLQNEDVRFTSSSIKLPL----------FSPPPL--------------HHHTPNPF----FANLHLVVQNFPKFPHPFCQNLNPRAAFLRTLSKFQHPFHQKFN---PQNAILQFLRKPIIPFPWKLSNTSPLLCCASIALSQSNLDD--SAPSLGTKTGSGN-EERVLISEVLVRSKDGEELERKDLENEVLNALKACRPNSALTVQEVQEDVHRIIASGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPAKFIEDSFRDGYGKIVNIKRIDEIISSINGWYMERGLFGAVSGVEMLSGGMIRLEVSEAEVNNIAIRFLDKTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVETVLAMGIMEDVSIIPQPSGDTGKVDLVMNVVERKSGAGISAGGGISSGITSGPLAGLIGSCAIYHKNLFGRNQKLNLSLERGQVDSVFRINYTDPWIEGDDKRTSRSIMIQNSRTPGTLVHNQPDGS-LTIGRVTAGIEYSRPFRPKWNGTAGIIFQRAGARDDKGSPIIRDYYSSPLTASGNTHDDMLLAKLETVYTGSGDPGSSVFVFNMDQGLPVWSDWLVFNRVNARARKGLALGPMHLLLSFSGGHVVGNFPPHEAFAIGGTNSVRGYEEGAVGSSRSYVVGCGEISFPLTGPVEGAVFADYGSDLGSGPSVPGDPAGPRRKPGSGYGCGVGIRVDSPLGPLRLEYAFNDQRTGRFHFGVGLRN 1687
BLAST of DCAR_018962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4A9J7 ((outer envelope protein 80, chloroplastic-like isoform X1 {ECO:0000313|RefSeq:XP_016473256.1}))
HSP 1 Score: 979.548 bits (2531), Expect = 0.000e+0
Identity = 514/739 (69.55%), Postives = 588/739 (79.57%), Query Frame = 0
Match: A0A1S4A9J7 ((outer envelope protein 80, chloroplastic-like isoform X1 {ECO:0000313|RefSeq:XP_016473256.1}))
HSP 1 Score: 979.548 bits (2531), Expect = 0.000e+0
Identity = 514/739 (69.55%), Postives = 588/739 (79.57%), Query Frame = 0
Query: 1 MPQNDNIRFISSSIKIPCETMPQKADIQFTLPSMKISSFRSSHYLRRKHHHIISPFASVQFSNHNSVLQFIDSVKTPFTQLVDFVKTPFTQFVNSLQPSSNIFNSTKNHSKRNPFHL---KSLLLSSASLALT------GPDE--GSLM---TPPKIGSQSASQNDEERVLISEVFVRNKDGEELERKDLENEAMTALKTCRPNSALTIHEVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFRGLVCEGANALPSKFVEDAFRGGYGKIVNIRRLNDVIDSINGWYMDRGLFGLVSGVEIFSGGIIRLQVSEAEVNDISIRFRRKTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERQ-SHGISAGGGISSGIANGPLAGLIGSCAIHHRNLFGRNQKLNLSLERGQVDSLFRLNYTDPWIEGDDKRTSRSIMVQNSKTPGSLVYSQPDGNILTIGRVTAGIEYSRPFRPNWSGTAGVTFQRAGARDDRGNPIIRDFYSSPLTASGNAYDKMLLAKLESVYTGSGGPGSSMLVLNMEQGLPVWTEWLAFNRVTARARKGFVAGPVSFSFGLSGGHMVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSHVVGSGEMSFPLLKPLEGVVFADCGTDLGSASAVPGDPAGARLKPGNGYGYGVGVRLESPFGPLRLEYALNDHGTGRFHFGVGYRN 724
MPQND++RF SSS+K+P + P +HH +PF F+N + +LQ S++ P Q + K P +F + P + I K N F+ K+ L+ SAS+ALT PD+ GS + PK+GS +EERVLISEV VRNKDGEELE KDLE+EA+ ALK CRPNSALT+ EVQEDVHRII SGYF SCMPVAVDTRDGIRLVFQVEPNQEF GLVCEGAN LP++F+ED+FR G GKIVNI+R++++I SINGWYM+RGLFG VS VE+ SGG+IRL VSEAEVN+I+IRF +TGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVDTVL MGIMEDVSI+PQPAGDTGKVDL MNVVER+ GISAGGGISSGI NGPLAGLIGSCAI+H+NLFGRNQKLNLSLERGQ+DSLFR+NYTDPWIEGDDKRTSRSIM+QNS+TPG+LV++QPDG+ LTIGRVTAGIEYSRPFRP W+GTAG+ FQRAGARDD+GNPIIRD+YSSPLTASGN +D MLLAKLE+VYTGSG PGSS+ V NMEQGLPVW+EWL FNRV ARARKG + GP+ SGGH+VGNFPPHEAF IGGTNSVRGYEEGA+GSGRS+VVG GE+SFPL+ PLEG VFAD GTDLGS +VPGDPAG R KPG+GYG GVG+R++SP GPLRLEYA ND TGRFHFGVG RN
Sbjct: 1 MPQNDDVRFTSSSLKLPLFSPPL------------------------QHHTQKNPF----FTNLHLILQN-SSLQNPILQTLS--KFPLPKFHQNFNPQNAILQFLKKPRNINLFNWNLPKTPLICSASMALTQSQVQNNPDDLPGSTQLSGSGPKMGS-----GNEERVLISEVLVRNKDGEELELKDLESEALNALKACRPNSALTVREVQEDVHRIIDSGYFCSCMPVAVDTRDGIRLVFQVEPNQEFHGLVCEGANVLPARFIEDSFRDGCGKIVNIKRIDEIISSINGWYMERGLFGAVSSVEMLSGGMIRLGVSEAEVNNIAIRFLDRTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVDTVLAMGIMEDVSIIPQPAGDTGKVDLIMNVVERKSGGGISAGGGISSGITNGPLAGLIGSCAIYHKNLFGRNQKLNLSLERGQIDSLFRINYTDPWIEGDDKRTSRSIMIQNSRTPGTLVHNQPDGS-LTIGRVTAGIEYSRPFRPKWNGTAGIVFQRAGARDDKGNPIIRDYYSSPLTASGNTHDDMLLAKLETVYTGSGDPGSSVFVFNMEQGLPVWSEWLGFNRVNARARKGVLLGPMRLLGSFSGGHVVGNFPPHEAFAIGGTNSVRGYEEGAVGSGRSYVVGCGEISFPLMGPLEGAVFADYGTDLGSGPSVPGDPAGPRRKPGSGYGCGVGIRVDSPLGPLRLEYAFNDQRTGRFHFGVGLRN 702
BLAST of DCAR_018962 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A660KMT9 (POTRA domain-containing protein {ECO:0000259|PROSITE:PS51779})
HSP 1 Score: 976.852 bits (2524), Expect = 0.000e+0
Identity = 508/777 (65.38%), Postives = 578/777 (74.39%), Query Frame = 0
HSP 2 Score: 42.743 bits (99), Expect = 3.430e-1
Identity = 28/76 (36.84%), Postives = 35/76 (46.05%), Query Frame = 0
Match: A0A660KMT9 (POTRA domain-containing protein {ECO:0000259|PROSITE:PS51779})
HSP 1 Score: 976.852 bits (2524), Expect = 0.000e+0
Identity = 508/777 (65.38%), Postives = 578/777 (74.39%), Query Frame = 0
Query: 1 MPQNDNIRFISSSIKIPCETMPQKADIQFTLPSMKISSFRSSHYLRRKHHHIISPFASVQFSNHNSVLQFIDSVKTPFTQLVDFVK-TP-FTQFVN-----------------------------------SLQPSSNIFNSTKNHSKRN--------PFHLKSLLLSSASLALTGPDE------GSLMTPPKIGSQSASQNDEERVLISEVFVRNKDGEELERKDLENEAMTALKTCRPNSALTIHEVQEDVHRIIGSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFRGLVCEGANALPSKFVEDAFRGGYGKIVNIRRLNDVIDSINGWYMDRGLFGLVSGVEIFSGGIIRLQVSEAEVNDISIRF-RRKTGEPTVGKTRPETILRQLTTKKGQVYSMLQGKRDVDTVLTMGIMEDVSIVPQPAGDTGKVDLTMNVVERQSHGISAGGGISSGIANGPLAGLIGSCAIHHRNLFGRNQKLNLSLERGQVDSLFRLNYTDPWIEGDDKRTSRSIMVQNSKTPGSLVY-SQPDGNILTIGRVTAGIEYSRPFRPNWSGTAGVTFQRAGARDDRGNPIIRDFYSSPLTASGNAYDKMLLAKLESVYTGSGGPGSSMLVLNMEQGLPVWTEWLAFNRVTARARKGFVAGPVSFSFGLSGGHMVGNFPPHEAFPIGGTNSVRGYEEGAIGSGRSHVVGSGEMSFPLLKPLEGVVFADCGTDLGSASAVPGDPAGARLKPGNGYGYGVGVRLESPFGPLRLEYALNDHGTGRFHFGVGYRN 724
MPQND++RF SSS+K+P PQ + +F S I AS NS+ Q IDSVKT DF + +P F+ +N ++ + + K+ S+R KS LL SASLALT PDE S G ++ +DEERVLISEV VRNKDGEELERKDLE EA+ ALK CR NSALT+ EVQEDVHRII SGYFSSCMPVAVDTRDGIRLVFQVEPNQEF+GLVCEGAN LP+KF+ED+FRGGYGK++N+RRL++ I SINGWYM+RG F LVS VEI SGGI+RLQVSEAEVN ISIRF RKTGEPT GKT+PETILRQLTTKKGQVYSMLQGKRDV+TVLTMGIMEDVSI+PQPAGDTGKVD+ MNVVER S G SAGGGISSGI +GPL+GLIGS A HRN+FGRNQKLN+SLERGQ+DS+FR+NYTDPWIEGDDKRTSR+IMVQNS+TPG+LV+ QPDG+ LTIGRVTAGIE+S+P RP WSGTAG+ FQ AG R+++GNP+I+DFYSSPLTASG +D MLLAK ESVYTGSG GSSM V+NMEQGLPV EWL+FNRV ARARKG GP F L GGH+VGNFPPHEAF IGGTNSVRGYEEGA+GSGRS+ VGSGE+SFP+L P+ GV+FAD GTDLGS V GDPAGARLKPG+GYGYG G+R+ESP GPLRLEYA ND RFHFGVGYRN
Sbjct: 263 MPQNDDVRFTSSSLKVPLP--PQPSPFKFPFCSQTI--------------------ASQMAKTRNSLAQLIDSVKT----RSDFKRFSPGFSHLLNRPTELTHSESRLGNLCGGVGVLIGKSSLLCSSSLSLIRSDESTLGTQKSGSRRQYGKEEEQRQLVPKSSLLCSASLALTRPDEPATQGDSSGREAQSKGHSTSRVHDEERVLISEVLVRNKDGEELERKDLEMEALQALKACRANSALTVSEVQEDVHRIIHSGYFSSCMPVAVDTRDGIRLVFQVEPNQEFQGLVCEGANVLPAKFLEDSFRGGYGKVINLRRLDEAISSINGWYMERGFFALVSAVEILSGGILRLQVSEAEVNKISIRFLDRKTGEPTTGKTKPETILRQLTTKKGQVYSMLQGKRDVETVLTMGIMEDVSIIPQPAGDTGKVDMVMNVVERPSGGFSAGGGISSGITSGPLSGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIEGDDKRTSRTIMVQNSRTPGTLVHGDQPDGSCLTIGRVTAGIEFSQPIRPKWSGTAGLFFQHAGVREEKGNPVIKDFYSSPLTASGKIHDDMLLAKFESVYTGSGDQGSSMFVVNMEQGLPVLPEWLSFNRVNARARKGIEIGPSRFLLSLCGGHVVGNFPPHEAFAIGGTNSVRGYEEGAVGSGRSYAVGSGEISFPMLGPVGGVIFADYGTDLGSGPTVLGDPAGARLKPGSGYGYGFGIRVESPLGPLRLEYAFNDRHANRFHFGVGYRN 1013
HSP 2 Score: 42.743 bits (99), Expect = 3.430e-1
Identity = 28/76 (36.84%), Postives = 35/76 (46.05%), Query Frame = 0
Query: 1 MPQNDNIRFISSSIKIPCETMPQKADIQFTLPSMKISSFRSSHYLRRKHHHIISPFASVQFSNHNSVLQFIDSVKT 76
MPQND++RF SSS+K+P PQ + +F S I AS NS+ Q IDSVKT
Sbjct: 80 MPQNDDVRFTSSSLKVPLP--PQPSPFKFPFCSQTI--------------------ASQMAKTRNSLAQLIDSVKT 133
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7AWA5 | E-Value: 0.000e+0, PID: 70.08 | POTRA domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A2R6P855 | E-Value: 0.000e+0, PID: 69.69 | (Outer envelope protein {ECO:0000313|EMBL:PSR86836... [more] |
| A0A834G245 | E-Value: 0.000e+0, PID: 68.48 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7121... [more] |
| A0A103XHH3 | E-Value: 0.000e+0, PID: 70.87 | (Bacterial surface antigen (D15) {ECO:0000313|EMBL... [more] |
| A0A2J6KPH0 | E-Value: 0.000e+0, PID: 71.49 | POTRA domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A6S7NV65 | E-Value: 0.000e+0, PID: 71.21 | POTRA domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A5J5AB16 | E-Value: 0.000e+0, PID: 70.08 | POTRA domain-containing protein {ECO:0000259|PROSI... [more] |
| A0A3Q7IKG4 | E-Value: 0.000e+0, PID: 68.79 | Calcium-transporting ATPase {ECO:0000256|RuleBase:... [more] |
| A0A1S4A9J7 | E-Value: 0.000e+0, PID: 69.55 | (outer envelope protein 80, chloroplastic-like iso... [more] |
| A0A660KMT9 | E-Value: 3.430e-1, PID: 65.38 | POTRA domain-containing protein {ECO:0000259|PROSI... [more] |
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An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |