Resource Type:
Polypeptide
Name:
DCAR_018288
Identifier:
DCAR_018288.mRNA-protein
Sequence:
MMFLICGFFTLQVMEWMNKSGNGFAPTDTAKYLDLTAKVKGISAAEYYFN
GLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEMDKMGIVSTIAFNNLM
TLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERV
FEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEE
AGRVFEHVVKRCEGPYYRYWEMLMSYYLEKHEIDTALECLEAAISEGKNN
EWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSLLEIY
AGASQIVLFNPSRLFSATPSSLVRYVCTAVKMEHDAAAAAATVQKVVKLK
RDVLYLQLSAPDSSKASTLDTLNLFFPEKDDFTSKFQLNSCILQLRRSGK
VLRALQVMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIA
KDISTYGALLNCYCREKLTDKALNLFEKMDTMQFLSSVAFNNLMSLYMRL
NMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITH
NNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKP
FHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVN
GFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNG
NTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLME
YFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRI
MDDGIEASPELEERRRFPSSSPPTRYLCTAVTEKQPAAPARSKKSGRERS
DGLYNRLSALGRSGGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKAD
HALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKD
RSTYGALLNCYCREKLAEKAQTLFEKMDSMHIVSSLTFNNLMSLCMRRNM
PEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNN
GEEQNSWTAYSNLAAAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRC
KGPFYQHCKPLILYYLDKSQVDLALGCLKAALCEVKDNERHQTYEDVKSF
VMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMR
CRIMDDGIEITSELEKLLERVCPE*
Sequence Length:
1225
Sequence Checksum:
f7013552414e625862f2c92a3a1d7fa3
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_018288, derives from mRNA, DCAR_018288. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_018288 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_018288 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A199VK99 ((Pentatricopeptide repeat-containing protein, mitochondrial {ECO:0000313|EMBL:OAY77301.1}))
HSP 1 Score: 496.123 bits (1276), Expect = 1.414e-154
Identity = 314/773 (40.62%), Postives = 435/773 (56.27%), Query Frame = 0
HSP 2 Score: 278.1 bits (710), Expect = 2.323e-75
Identity = 169/426 (39.67%), Postives = 246/426 (57.75%), Query Frame = 0
HSP 3 Score: 194.897 bits (494), Expect = 4.252e-48
Identity = 117/255 (45.88%), Postives = 159/255 (62.35%), Query Frame = 0
HSP 4 Score: 148.288 bits (373), Expect = 1.842e-33
Identity = 81/188 (43.09%), Postives = 121/188 (64.36%), Query Frame = 0
HSP 5 Score: 129.798 bits (325), Expect = 1.044e-27
Identity = 75/185 (40.54%), Postives = 111/185 (60.00%), Query Frame = 0
HSP 6 Score: 84.7297 bits (208), Expect = 7.079e-14
Identity = 69/240 (28.75%), Postives = 111/240 (46.25%), Query Frame = 0
HSP 7 Score: 79.7221 bits (195), Expect = 2.883e-12
Identity = 66/264 (25.00%), Postives = 119/264 (45.08%), Query Frame = 0
HSP 8 Score: 69.3218 bits (168), Expect = 3.973e-9
Identity = 76/271 (28.04%), Postives = 120/271 (44.28%), Query Frame = 0
Match: A0A199VK99 ((Pentatricopeptide repeat-containing protein, mitochondrial {ECO:0000313|EMBL:OAY77301.1}))
HSP 1 Score: 496.123 bits (1276), Expect = 1.414e-154
Identity = 314/773 (40.62%), Postives = 435/773 (56.27%), Query Frame = 0
Query: 354 LYLQLSAPDSS-KASTLDTLNLFFPEKDDFTSKFQLNSCILQLRRSGKVLRALQVMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIAKDISTYGALLNCYCREKLTDKALNLFEKMDTMQFLSSVAFNN-LMSLYMRLNMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITHNNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKPFHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVNGFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNGNTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLMEYFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRIMDDGIEASPELEERRRFPSSS--------------------------PPTRYLCTAVTEKQPAAPARSKKSGRERSDGLYNRLSALGRSG-GSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKADHALQVMEWM-QTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDRSTYGALLNCYCREKLAEKAQTLFEKMDSMHIVSS-LTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNS----WTAYSNLAAAYVRAGLKEKAESGLKK-NGLIKEAE 1090
LY +LSA + AS +TLN + EK SK +L + LRR K AL++M+WM +R ++ P +HA +LDLIS+VKG+ +AE++F+ +P+ AK+ TY ALLN Y KL +KA++L+EKM + F S+ +N LM+L+M+L PEK+P L +EMK +++ +Y I + SY + DIE+ EKV E+ G V DW+ +SNLA Y AGLYEKAE+ L+ +E+ M KR R PFHYL+SLYAG NL +V ++WK + AFK ++ S L +L+ ++LD ++ K+ FEEWES YD R+ I YLK + +AE + + + + F + +YL+ Q+D AL C E I VK NE PT E V++ +F++ D + E FC+ LKK N LD EAY+ L+ RI DDGIE E E + P R L TA E +P + + S LY RLSALG + GS TLNK+ EG R EL + +LR++ + HAL++M+WM +TR + T+HA LDL+ KV+GI +AE YFS LPE+AK+ TYGALLNCYC K+ EKA +L+ KMD + + SS L NNLMSL + PE V+ Q MK +N+ T I MTSY+ +DI VE V EM EE+ S W+AYS LA Y+ +GL KAE+ LKK GLI E
Sbjct: 46 LYRRLSALGADPSASAAETLNGWVREKKA-VSKPELIGYVKALRRYKKHKHALELMDWMESRGMELSPGNHATRLDLISKVKGLDSAESYFSSLPDTAKNQQTYCALLNSYAELKLAEKAISLYEKMKELNFTSTTLIHNVLMTLHMKLEQPEKIPELFREMKANSVSPDNFSYCILMRSYAAVNDIESVEKVVREM--KEGKVALDWSIYSNLAAHYNSAGLYEKAEAALKNLEQ---VMDKR-DRMPFHYLVSLYAGAGNLPEVIRVWKRYREAFKRPTNASYLIVLQAFSKLDGIDALKECFEEWESAYEIYDMRVANLVIDAYLKKDRVVDAENIRERAVSKGYADLRTF-NLFVDYYLKNHQIDLALECFEAGIEGVKKNERKPTKEIVDKFFRFFEESKDTDLLESFCESLKKQNCLDEEAYESLV---------------RIKDDGIELRSEAFESVKRAIIRTRRTRSRMAKNPILLRLLLPLPFRGIAPARGLSTAAAEAEPETAKKEATAAAADSKPLYRRLSALGGAPEGSVAKTLNKWVREGRSVRAVELMKYVKELRKYKRHTHALELMDWMVKTRGMNMSYTNHAIRLDLIYKVRGIESAEEYFSALPEAAKNARTYGALLNCYCTAKMEEKATSLYRKMDELSLASSTLVHNNLMSLYTKLGHPEKVLGQFQAMKAKNIAPDNLTCCILMTSYASADDIASVEGVINEM-----EEEESVTLHWSAYSTLAGIYISSGLLSKAEAALKKLEGLIGSRE 790
HSP 2 Score: 278.1 bits (710), Expect = 2.323e-75
Identity = 169/426 (39.67%), Postives = 246/426 (57.75%), Query Frame = 0
Query: 354 LYLQLSA-PDSSKASTLDTLNLFFPEKDDFTSKFQLNSCILQLRRSGKVLRALQVMEWM-HTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIAKDISTYGALLNCYCREKLTDKALNLFEKMDTMQFLSS-VAFNNLMSLYMRLNMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITHNNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKPFHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVNGFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNGNTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLMEYFKKEGDVNKAEKFCKILKKVNLLDS 776
LY +LSA + + S TLN + E + +L + +LR+ + AL++M+WM TR + T+HA +LDLI +V+GI +AE +F+ +PE AK+ TYGALLNCYC K+ +KA +L+ KMD + SS + NNLMSLY +L PEKV Q MK +NIA T I +TSY DI + E V E+ H W+ +S LA Y+ +GL KAE+ L+K+E I G R R+PFH+L+SLYAGT NL +V+++W LK+ F ++ L ML+ L +LDD G K+I++EWES T+D +L IG +L+ EEAE ++ ++ + + HYL++ + AL LE AIS+ K +E E VN+ + F++ D AEKF K LK+ +DS
Sbjct: 550 LYRRLSALGGAPEGSVAKTLNKWVREGRSVRA-VELMKYVKELRKYKRHTHALELMDWMVKTRGMNMSYTNHAIRLDLIYKVRGIESAEEYFSALPEAAKNARTYGALLNCYCTAKMEEKATSLYRKMDELSLASSTLVHNNLMSLYTKLGHPEKVLGQFQAMKAKNIAPDNLTCCILMTSYASADDIASVEGVINEMEEEESVTLH-WSAYSTLAGIYISSGLLSKAEAALKKLEGLI---GSR-EREPFHFLMSLYAGTGNLGEVNRVWSSLKAQFTKITNTGYLIMLQALNKLDDAEGMKEIYKEWESIYVTHDVKLTNLMIGAFLRGDSTEEAEAIWARASEKGAVFDFRTCELFIDHYLKRSETGPALKWLEMAISLAKGDEWKLDNEKVNKYLSCFEEAKDAEGAEKFLKCLKRSGSVDS 969
HSP 3 Score: 194.897 bits (494), Expect = 4.252e-48
Identity = 117/255 (45.88%), Postives = 159/255 (62.35%), Query Frame = 0
Query: 853 LYNRLSALGRS-GGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDRSTYGALLNCYCREKLAEKAQTLFEKMDSMHIVS-SLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLAAAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRCKGPFY 1105
LY RLSALG SA +TLN + E K EL + LRR+ K HAL++M+WM++R ++ P +HA LDL+SKVKG+ +AE+YFS LP++AK++ TY ALLN Y KLAEKA +L+EKM ++ S +L N LM+L M+ PE + L +EMK ++ +Y I M SY+ +NDIE VE+V EM+ G+ W+ YSNLAA Y AGL EKAE+ LK E V+D KR + PF+
Sbjct: 46 LYRRLSALGADPSASAAETLNGWVREKKAVSKPELIGYVKALRRYKKHKHALELMDWMESRGMELSPGNHATRLDLISKVKGLDSAESYFSSLPDTAKNQQTYCALLNSYAELKLAEKAISLYEKMKELNFTSTTLIHNVLMTLHMKLEQPEKIPELFREMKANSVSPDNFSYCILMRSYAAVNDIESVEKVVREMK--EGKVALDWSIYSNLAAHYNSAGLYEKAEAALKN------LEQVMD---KRDRMPFH 289
HSP 4 Score: 148.288 bits (373), Expect = 1.842e-33
Identity = 81/188 (43.09%), Postives = 121/188 (64.36%), Query Frame = 0
Query: 10 TLQVMEWMNKSGNGFAPTDTAKYLDLTAKVKGISAAEYYFNGLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEMDKMGIVSTIAFNN-LMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHD 196
L++M+WM G +P + A LDL +KVKG+ +AE YF+ L + ++ Y ALLN + + L +KA +L+ +M ++ ST +N LMTL+MK+ QPEK+P L +E+K ++ D FSY + M SY+++NDI++VE+V E+ GK DW+I SNLA+ Y + GL EKAE LK LE+ D
Sbjct: 96 ALELMDWMESRGMELSPGNHATRLDLISKVKGLDSAESYFSSLPDTAKNQQTYCALLNSYAELKLAEKAISLYEKMKELNFTSTTLIHNVLMTLHMKLEQPEKIPELFREMKANSVSPDNFSYCILMRSYAAVNDIESVEKVVREMK--EGKVALDWSIYSNLAAHYNSAGLYEKAEAALKNLEQVMD 281
HSP 5 Score: 129.798 bits (325), Expect = 1.044e-27
Identity = 75/185 (40.54%), Postives = 111/185 (60.00%), Query Frame = 0
Query: 10 TLQVMEWMNKS-GNGFAPTDTAKYLDLTAKVKGISAAEYYFNGLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEMDKMGIV-STIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELE 192
L++M+WM K+ G + T+ A LDL KV+GI +AE YF+ L + + YGALLNC+C +E+KA +L+ +MD++ + ST+ NNLM+LY K+ PEKV Q +K +N+ D + + M SY+S +DI +VE V E+ W+ S LA Y++ GL KAE LK+LE
Sbjct: 600 ALELMDWMVKTRGMNMSYTNHAIRLDLIYKVRGIESAEEYFSALPEAAKNARTYGALLNCYCTAKMEEKATSLYRKMDELSLASSTLVHNNLMSLYTKLGHPEKVLGQFQAMKAKNIAPDNLTCCILMTSYASADDIASVEGVINEMEE-EESVTLHWSAYSTLAGIYISSGLLSKAEAALKKLE 783
HSP 6 Score: 84.7297 bits (208), Expect = 7.079e-14
Identity = 69/240 (28.75%), Postives = 111/240 (46.25%), Query Frame = 0
Query: 62 YGALLNCFCQGGLEDKAHALFVEMDK-MGIVSTIAFNNLMTLYMKIHQ-PEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCEGPYYRYWEMLMSYYLEKHEIDTALECLEAAISEGKNNEWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSLLEI 299
Y L + GL +KA A +++ M + F+ L++LY PE + + + P + SY + + ++S L+ I A++ FEE Y + YD + + + AY+ K D +A + E V + R + + + YYL+ H+ID ALEC EA I K NE PT E V++F +F++ D + E FC+ L+K LD Y SL+ I
Sbjct: 253 YSNLAAHYNSAGLYEKAEAALKNLEQVMDKRDRMPFHYLVSLYAGAGNLPEVIRVWKRYREAFKRPTNA-SYLIVLQAFSKLDGIDALKECFEEWESAY--EIYDMRVANLVIDAYL-----------------KKDRVVDAENIRERAVSKGYADL-RTFNLFVDYYLKNHQIDLALECFEAGIEGVKKNERKPTKEIVDKFFRFFEESKDTDLLESFCESLKKQNCLDEEAYESLVRI 471
HSP 7 Score: 79.7221 bits (195), Expect = 2.883e-12
Identity = 66/264 (25.00%), Postives = 119/264 (45.08%), Query Frame = 0
Query: 37 AKVKGISAAEYYFNGLLPSE---IHKCAYGALLNCFCQGGLEDKAHALFVEMDKM-GIVSTIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCEGPYYRYWEMLMSYYLEKHEIDTALECLEAAISEGKNNEWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSL 296
A I++ E N + E +H AY L + GL KA A +++ + G F+ LM+LY +V + LK + + Y + + + + L+D + ++ +++E IY +D + + + A++ + D TEEA ++ ++ +R E+ + +YL++ E AL+ LE AIS K +EW E VN+++ F++ DA GAE F K L++ +D T L
Sbjct: 731 ASADDIASVEGVINEMEEEESVTLHWSAYSTLAGIYISSGLLSKAEAALKKLEGLIGSREREPFHFLMSLYAGTGNLGEVNRVWSSLKAQFTKITNTGYLIMLQALNKLDDAEGMKEIYKEWESIY--VTHDVKLTNLMIGAFL-----------------RGDSTEEAEAIWARASEKGAVFDFRTCELFIDHYLKRSETGPALKWLEMAISLAKGDEWKLDNEKVNKYLSCFEEAKDAEGAEKFLKCLKRSGSVDSSELTRL 975
HSP 8 Score: 69.3218 bits (168), Expect = 3.973e-9
Identity = 76/271 (28.04%), Postives = 120/271 (44.28%), Query Frame = 0
Query: 948 AKDRSTYGALLNCYCREKLAEKAQTLFEKMDS-MHIVSSLTFNNLMSL-CMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLAAAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRCKGPFYQHCKPLIL---YYLDKSQVDLALGCLKAALCEVKDNERHQTYEDVKSFVMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMRCRIMDDGIEITSE 1213
A D S Y L Y L EKA+ + ++ M + F+ L+SL N+PE + + + P +Y I + ++S+++ I+ ++ FEE + +++ Y A V ++ LKK+ ++ +NI +R Y + L YYL Q+DLAL C +A + VK NER T E V F +F++ ++ E C+ LK LD EAY L+ RI DDGIE+ SE
Sbjct: 247 ALDWSIYSNLAAHYNSAGLYEKAEAALKNLEQVMDKRDRMPFHYLVSLYAGAGNLPEVIRVWKRYREAFKRPTNA-SYLIVLQAFSKLDGIDALKECFEEWE-------SAYEIYDMRVANLV-------IDAYLKKDRVVD-----AENIRERAVSKGYADLRTFNLFVDYYLKNHQIDLALECFEAGIEGVKKNERKPTKEIVDKF-FRFFEESKDTDLLESFCESLKKQNCLDEEAYESLV---------------RIKDDGIELRSE 481
BLAST of DCAR_018288 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3YBB6 ((pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like {ECO:0000313|RefSeq:XP_016449546.1}))
HSP 1 Score: 476.093 bits (1224), Expect = 2.313e-153
Identity = 243/461 (52.71%), Postives = 322/461 (69.85%), Query Frame = 0
HSP 2 Score: 274.248 bits (700), Expect = 3.554e-78
Identity = 146/270 (54.07%), Postives = 185/270 (68.52%), Query Frame = 0
HSP 3 Score: 199.134 bits (505), Expect = 4.388e-52
Identity = 107/224 (47.77%), Postives = 145/224 (64.73%), Query Frame = 0
HSP 4 Score: 141.354 bits (355), Expect = 1.374e-32
Identity = 102/335 (30.45%), Postives = 178/335 (53.13%), Query Frame = 0
HSP 5 Score: 131.339 bits (329), Expect = 2.683e-29
Identity = 83/268 (30.97%), Postives = 134/268 (50.00%), Query Frame = 0
Match: A0A1S3YBB6 ((pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like {ECO:0000313|RefSeq:XP_016449546.1}))
HSP 1 Score: 476.093 bits (1224), Expect = 2.313e-153
Identity = 243/461 (52.71%), Postives = 322/461 (69.85%), Query Frame = 0
Query: 354 LYLQLSAPDSSKASTLDTLNLFFPEKDDFTSKFQLNSCILQLRRSGKVLRALQVMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIAKDISTYGALLNCYCREKLTDKALNLFEKMDTMQFLS-SVAFNNLMSLYMRLNMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITHNNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKPFHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVNGFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNGNTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLMEYFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRIMDDGIEASPELEE 813
LY +LSA ++K S +T+N + E K++L CI +LR+ + AL++MEWM R I D+ +LDLI++V+GI+AAEN+F G+ ++ STYGALLNCYC EK+TDKAL+LFEKMD + F S S+AFNNLMSLYMRL PEKVPPLVQEMK+R + L TYNI + SY+CL DIE E+VFEEI N A + DWTT+SNLAVAYVKAGL++KAE L+K+EEE MG R R+ +HYL+SL+AG SNL V++IW LKS F + ++ S L ML++L +L+D+NG KK +EEWES+CS+YD RL IG YL+H M+ +AE VFH+ LKR G W+ M +L +Q++ A+ C+E A S VK NE P E +N+ +EYF +E DV+ AE+F K LKK+N L S+ Y LLL TY+ A++ A DM RI +DG E S ELE+
Sbjct: 36 LYRRLSALGATKGSVTETINEYMRE-GRVVKKYELEKCIKELRKYKRYQHALEIMEWMEKRGINLSFGDYGVRLDLIAKVQGITAAENYFGGLSPSMQNQSTYGALLNCYCVEKMTDKALSLFEKMDQLNFTSKSLAFNNLMSLYMRLGQPEKVPPLVQEMKSRKVPLCTFTYNILMNSYSCLGDIEGVERVFEEIKQEN-AKECDWTTYSNLAVAYVKAGLHDKAELALKKLEEE---MGPR-NREAYHYLISLHAGISNLGGVYRIWNSLKSHFSITTNSSYLVMLQSLGKLNDINGLKKCYEEWESSCSSYDMRLANSVIGAYLRHDMLHDAEEVFHHALKRSQGPFFLAWEMFMAFFLRNRQINLAMKCMEAAASRVKKNEWQPKYEMINKFLEYFVEERDVDGAEEFYKYLKKLNCLSSDVYSLLLRTYIVANRTAEDMLLRIKEDGTEMSCELED 490
HSP 2 Score: 274.248 bits (700), Expect = 3.554e-78
Identity = 146/270 (54.07%), Postives = 185/270 (68.52%), Query Frame = 0
Query: 815 RRFPSSSPPT-RYLCTAVTEKQPAAPARSKKSGRERSDGLYNRLSALGRSGGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDRSTYGALLNCYCREKLAEKAQTLFEKMDSMHIVS-SLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLAAAYVRAGLKEKAESGLKK 1082
R+ + +P R LCTA A A + G R LY RLSALG + GS +T+N+Y EG +KYEL+ CI +LR++ + HAL++MEWM+ R I D+ LDL++KV+GI+AAENYF GL S +++STYGALLNCYC EK+ +KA +LFEKMD ++ S SL FNNLMSL MR PE V PLVQEMK+R +PL TYNI M SYS + DIEGVERVFEE++ N +E + WT YSNLA AYV+AGL +KAE LKK
Sbjct: 7 RQISNETPVNLRRLCTA-------AEAAELRGGDGR---LYRRLSALGATKGSVTETINEYMREGRVVKKYELEKCIKELRKYKRYQHALEIMEWMEKRGINLSFGDYGVRLDLIAKVQGITAAENYFGGLSPSMQNQSTYGALLNCYCVEKMTDKALSLFEKMDQLNFTSKSLAFNNLMSLYMRLGQPEKVPPLVQEMKSRKVPLCTFTYNILMNSYSCLGDIEGVERVFEEIKQENAKECD-WTTYSNLAVAYVKAGLHDKAELALKK 265
HSP 3 Score: 199.134 bits (505), Expect = 4.388e-52
Identity = 107/224 (47.77%), Postives = 145/224 (64.73%), Query Frame = 0
Query: 10 TLQVMEWMNKSGNGFAPTDTAKYLDLTAKVKGISAAEYYFNGLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEMDKMGIVS-TIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCE-----GPYYRYWEMLMSYY 227
L++MEWM K G + D LDL AKV+GI+AAE YF GL PS ++ YGALLNC+C + DKA +LF +MD++ S ++AFNNLM+LYM++ QPEKVP L+QE+K+R +PL F+Y++ M SYS L DI+ VERVFEE+ K+ DWT SNLA AYV GL +KAEL LK+LE+ +M + +++ G YR W L S++
Sbjct: 85 ALEIMEWMEKRGINLSFGDYGVRLDLIAKVQGITAAENYFGGLSPSMQNQSTYGALLNCYCVEKMTDKALSLFEKMDQLNFTSKSLAFNNLMSLYMRLGQPEKVPPLVQEMKSRKVPLCTFTYNILMNSYSCLGDIEGVERVFEEIKQENAKE-CDWTTYSNLAVAYVKAGLHDKAELALKKLEE--EMGPRNREAYHYLISLHAGISNLGGVYRIWNSLKSHF 305
HSP 4 Score: 141.354 bits (355), Expect = 1.374e-32
Identity = 102/335 (30.45%), Postives = 178/335 (53.13%), Query Frame = 0
Query: 895 RFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLP-ESAK--DRSTYGALLNCYCREKLAEKAQTLFEKMDS-MHIVSSLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYS-NLAAAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRCKGPFYQHCKPLILYYLDKSQVDLALGCLKAALCEVKDNERHQTYEDVKSFVMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMRCRIMDDGIEITSELEKLLERVCPE 1224
R G+ + +++ M++RK+ + ++ S + I E F + E+AK D +TY L Y + L +KA+ +K++ M + ++ L+SL + V + +K+ +Y + + S ++NDI G+++ +EE + +S ++Y LA + + A L+ + ++ +AE+V + LKR +GPF+ + + ++L Q++LA+ C++AA VK NE YE + F +EYF +ER+V GAE+ K LK L L + Y LLL TY+ A++ A +M RI +DG E++ ELE LL+RVCPE
Sbjct: 181 RLGQPEKVPPLVQEMKSRKVPLCTFTYNILMNSYSCLGDIEGVERVFEEIKQENAKECDWTTYSNLAVAYVKAGLHDKAELALKKLEEEMGPRNREAYHYLISLHAGISNLGGVYRIWNSLKSHFSITTNSSYLVMLQSLGKLNDINGLKKCYEEWE-------SSCSSYDMRLANSVIGAYLR---------HDMLHDAEEVFHHALKRSQGPFFLAWEMFMAFFLRNRQINLAMKCMEAAASRVKKNEWQPKYEMINKF-LEYFVEERDVDGAEEFYKYLKKLNCLSSDVYSLLLRTYIVANRTAEDMLLRIKEDGTEMSCELEDLLKRVCPE 498
HSP 5 Score: 131.339 bits (329), Expect = 2.683e-29
Identity = 83/268 (30.97%), Postives = 134/268 (50.00%), Query Frame = 0
Query: 42 ISAAEYYFNGLLPSEIHKC---AYGALLNCFCQGGLEDKAHALFVEMDK-MGIVSTIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCEGPYYRYWEMLMSYYLEKHEIDTALECLEAAISEGKNNEWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSLLEIYAGASQ 305
I E F + +C Y L + + GL DKA ++++ MG + A++ L++L+ I V + LK+ SY V + S LNDI +++ +EE +YD + +++ AY+ +HDM +A VF H +KR +GP++ WEM M+++L +I+ A++C+EAA S K NEW P E +N+F+EYF ++ D +GAE F K L+KL L Y+ LL Y A++
Sbjct: 220 IEGVERVFEEIKQENAKECDWTTYSNLAVAYVKAGLHDKAELALKKLEEEMGPRNREAYHYLISLHAGISNLGGVYRIWNSLKSHFSITTNSSYLVMLQSLGKLNDINGLKKCYEEWE--SSCSSYDMRLANSVIGAYL-----------------RHDMLHDAEEVFHHALKRSQGPFFLAWEMFMAFFLRNRQINLAMKCMEAAASRVKKNEWQPKYEMINKFLEYFVEERDVDGAEEFYKYLKKLNCLSSDVYSLLLRTYIVANR 468
BLAST of DCAR_018288 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6JN24 ((Pentatricopeptide repeat-containing protein, mitochondrial {ECO:0000313|EMBL:OIT08297.1}))
HSP 1 Score: 470.315 bits (1209), Expect = 3.757e-151
Identity = 241/461 (52.28%), Postives = 323/461 (70.07%), Query Frame = 0
HSP 2 Score: 268.855 bits (686), Expect = 2.747e-76
Identity = 145/271 (53.51%), Postives = 183/271 (67.53%), Query Frame = 0
HSP 3 Score: 194.126 bits (492), Expect = 2.337e-50
Identity = 105/224 (46.88%), Postives = 144/224 (64.29%), Query Frame = 0
HSP 4 Score: 144.821 bits (364), Expect = 1.021e-33
Identity = 104/335 (31.04%), Postives = 182/335 (54.33%), Query Frame = 0
HSP 5 Score: 139.043 bits (349), Expect = 7.230e-32
Identity = 85/268 (31.72%), Postives = 137/268 (51.12%), Query Frame = 0
Match: A0A1J6JN24 ((Pentatricopeptide repeat-containing protein, mitochondrial {ECO:0000313|EMBL:OIT08297.1}))
HSP 1 Score: 470.315 bits (1209), Expect = 3.757e-151
Identity = 241/461 (52.28%), Postives = 323/461 (70.07%), Query Frame = 0
Query: 354 LYLQLSAPDSSKASTLDTLNLFFPEKDDFTSKFQLNSCILQLRRSGKVLRALQVMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIAKDISTYGALLNCYCREKLTDKALNLFEKMDTMQFLS-SVAFNNLMSLYMRLNMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITHNNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKPFHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVNGFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNGNTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLMEYFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRIMDDGIEASPELEE 813
LY +LSA ++K S +T+N + E K++L CI +LR+ + AL++MEWM R I D+ +LDLI++V+GI+AAEN+F + ++ STYGALLNCYC EKLTDKAL+LFEKMD ++F S S+AFNNLMSLYMRL PEKVPP+VQEMK+R + L TYNI + SY+CL DIE E+VFEEI N A + DWTT+SNLAVAYVKAGL++KA+ L+K+EEE MG R R+ +HYL+SL+AG SNL +V++IW LKS F + ++ S L ML++L +L+D++G KK +EEWES+CS+YD RL IG YL+H M+ +AE VF + LKR G W+ M +L Q++ A+ C+E A S VK NE P E +N+ +EYF +E DV+ AE+F K LKK+N L S+ Y LL TY+AA++ A DM+ RI +DGIE S ELEE
Sbjct: 40 LYRRLSALGATKGSVTETINEYMRE-GRVVKKYELEKCIKELRKYKRYQHALEIMEWMEKRGINLSFGDYGVRLDLIAKVQGITAAENYFGNLSPSMQNQSTYGALLNCYCVEKLTDKALSLFEKMDQLKFTSKSLAFNNLMSLYMRLGQPEKVPPVVQEMKSRKVPLCTFTYNILMNSYSCLGDIEGVERVFEEIKQEN-AKECDWTTYSNLAVAYVKAGLHDKAKLALKKLEEE---MGPR-NREAYHYLISLHAGISNLGEVYRIWNSLKSHFSVTTNSSYLVMLQSLGKLNDIDGLKKCYEEWESSCSSYDMRLANSVIGAYLRHDMLHDAEEVFRHALKRSQGPFFLAWEMFMAFFLRNHQINLAMKCMEAAASRVKKNEWQPKYEMINKFLEYFVEERDVDGAEEFFKYLKKLNCLSSDVYSSLLRTYIAANRTAEDMQLRIKEDGIEMSCELEE 494
HSP 2 Score: 268.855 bits (686), Expect = 2.747e-76
Identity = 145/271 (53.51%), Postives = 183/271 (67.53%), Query Frame = 0
Query: 815 RRFPSSSP-PTRYLCTAVTEKQPAAPARSKKSGRERSDG-LYNRLSALGRSGGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDRSTYGALLNCYCREKLAEKAQTLFEKMDSMHIVS-SLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLAAAYVRAGLKEKAESGLKK 1082
R+ S +P R LCTA + A R DG LY RLSALG + GS +T+N+Y EG +KYEL+ CI +LR++ + HAL++MEWM+ R I D+ LDL++KV+GI+AAENYF L S +++STYGALLNCYC EKL +KA +LFEKMD + S SL FNNLMSL MR PE V P+VQEMK+R +PL TYNI M SYS + DIEGVERVFEE++ N +E + WT YSNLA AYV+AGL +KA+ LKK
Sbjct: 7 RQISSETPVKLRRLCTAAAAEAEAVEQRG-------GDGRLYRRLSALGATKGSVTETINEYMREGRVVKKYELEKCIKELRKYKRYQHALEIMEWMEKRGINLSFGDYGVRLDLIAKVQGITAAENYFGNLSPSMQNQSTYGALLNCYCVEKLTDKALSLFEKMDQLKFTSKSLAFNNLMSLYMRLGQPEKVPPVVQEMKSRKVPLCTFTYNILMNSYSCLGDIEGVERVFEEIKQENAKECD-WTTYSNLAVAYVKAGLHDKAKLALKK 269
HSP 3 Score: 194.126 bits (492), Expect = 2.337e-50
Identity = 105/224 (46.88%), Postives = 144/224 (64.29%), Query Frame = 0
Query: 10 TLQVMEWMNKSGNGFAPTDTAKYLDLTAKVKGISAAEYYFNGLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEMDKMGIVS-TIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCE-----GPYYRYWEMLMSYY 227
L++MEWM K G + D LDL AKV+GI+AAE YF L PS ++ YGALLNC+C L DKA +LF +MD++ S ++AFNNLM+LYM++ QPEKVP ++QE+K+R +PL F+Y++ M SYS L DI+ VERVFEE+ K+ DWT SNLA AYV GL +KA+L LK+LE+ +M + +++ G YR W L S++
Sbjct: 89 ALEIMEWMEKRGINLSFGDYGVRLDLIAKVQGITAAENYFGNLSPSMQNQSTYGALLNCYCVEKLTDKALSLFEKMDQLKFTSKSLAFNNLMSLYMRLGQPEKVPPVVQEMKSRKVPLCTFTYNILMNSYSCLGDIEGVERVFEEIKQENAKEC-DWTTYSNLAVAYVKAGLHDKAKLALKKLEE--EMGPRNREAYHYLISLHAGISNLGEVYRIWNSLKSHF 309
HSP 4 Score: 144.821 bits (364), Expect = 1.021e-33
Identity = 104/335 (31.04%), Postives = 182/335 (54.33%), Query Frame = 0
Query: 895 RFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLP-ESAK--DRSTYGALLNCYCREKLAEKAQTLFEKMDS-MHIVSSLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYS-NLAAAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRCKGPFYQHCKPLILYYLDKSQVDLALGCLKAALCEVKDNERHQTYEDVKSFVMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMRCRIMDDGIEITSELEKLLERVCPE 1224
R G+ + V++ M++RK+ + ++ S + I E F + E+AK D +TY L Y + L +KA+ +K++ M + ++ L+SL + V + +K+ +Y + + S ++NDI+G+++ +EE + +S ++Y LA + + A L+ + ++ +AE+V + LKR +GPF+ + + ++L Q++LA+ C++AA VK NE YE + F +EYF +ER+V GAE+ K LK L L + Y LL TY+AA++ A +M+ RI +DGIE++ ELE+LL+RVCPE
Sbjct: 185 RLGQPEKVPPVVQEMKSRKVPLCTFTYNILMNSYSCLGDIEGVERVFEEIKQENAKECDWTTYSNLAVAYVKAGLHDKAKLALKKLEEEMGPRNREAYHYLISLHAGISNLGEVYRIWNSLKSHFSVTTNSSYLVMLQSLGKLNDIDGLKKCYEEWE-------SSCSSYDMRLANSVIGAYLR---------HDMLHDAEEVFRHALKRSQGPFFLAWEMFMAFFLRNHQINLAMKCMEAAASRVKKNEWQPKYEMINKF-LEYFVEERDVDGAEEFFKYLKKLNCLSSDVYSSLLRTYIAANRTAEDMQLRIKEDGIEMSCELEELLKRVCPE 502
HSP 5 Score: 139.043 bits (349), Expect = 7.230e-32
Identity = 85/268 (31.72%), Postives = 137/268 (51.12%), Query Frame = 0
Query: 42 ISAAEYYFNGLLPSEIHKC---AYGALLNCFCQGGLEDKAHALFVEMDK-MGIVSTIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCEGPYYRYWEMLMSYYLEKHEIDTALECLEAAISEGKNNEWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSLLEIYAGASQ 305
I E F + +C Y L + + GL DKA ++++ MG + A++ L++L+ I +V + LK+ SY V + S LNDI +++ +EE +YD + +++ AY+ +HDM +A VF H +KR +GP++ WEM M+++L H+I+ A++C+EAA S K NEW P E +N+F+EYF ++ D +GAE F K L+KL L Y+SLL Y A++
Sbjct: 224 IEGVERVFEEIKQENAKECDWTTYSNLAVAYVKAGLHDKAKLALKKLEEEMGPRNREAYHYLISLHAGISNLGEVYRIWNSLKSHFSVTTNSSYLVMLQSLGKLNDIDGLKKCYEEWE--SSCSSYDMRLANSVIGAYL-----------------RHDMLHDAEEVFRHALKRSQGPFFLAWEMFMAFFLRNHQINLAMKCMEAAASRVKKNEWQPKYEMINKFLEYFVEERDVDGAEEFFKYLKKLNCLSSDVYSSLLRTYIAANR 472
BLAST of DCAR_018288 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0H8B5 ((Tetratricopeptide repeat (TPR)-like superfamily protein {ECO:0000313|EMBL:GFZ19299.1}))
HSP 1 Score: 466.077 bits (1198), Expect = 1.992e-149
Identity = 253/507 (49.90%), Postives = 342/507 (67.46%), Query Frame = 0
HSP 2 Score: 271.552 bits (693), Expect = 2.891e-77
Identity = 147/260 (56.54%), Postives = 186/260 (71.54%), Query Frame = 0
HSP 3 Score: 187.963 bits (476), Expect = 3.025e-48
Identity = 98/186 (52.69%), Postives = 133/186 (71.51%), Query Frame = 0
HSP 4 Score: 152.14 bits (383), Expect = 4.013e-36
Identity = 102/286 (35.66%), Postives = 155/286 (54.20%), Query Frame = 0
HSP 5 Score: 149.443 bits (376), Expect = 2.512e-35
Identity = 88/246 (35.77%), Postives = 136/246 (55.28%), Query Frame = 0
Match: A0A7J0H8B5 ((Tetratricopeptide repeat (TPR)-like superfamily protein {ECO:0000313|EMBL:GFZ19299.1}))
HSP 1 Score: 466.077 bits (1198), Expect = 1.992e-149
Identity = 253/507 (49.90%), Postives = 342/507 (67.46%), Query Frame = 0
Query: 308 LFNPSRLFSATPSSLVRYVCT-AVKMEHDAAAAAATVQKVVKLKRDVLYLQLSAPDSSKASTLDTLNLFFPEKDDFTSKFQLNSCILQLRRSGKVLRALQVMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIAKDISTYGALLNCYCREKLTDKALNLFEKMDTMQFLS-SVAFNNLMSLYMRLNMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITHNNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKPFHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVNGFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNGNTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLMEYFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRIMDDGIEASPELE 812
+ + SRL SA +SL R++ T AV +E D A+ + +++ LY +LSA ++ + TLN + E K++L CI +LR+ + AL++MEWM R+I F D+A LDLIS+V+GI+AAE +F+ +P AK+ TYG+LLNCYC+EK+ DKAL LF+KMD M S S+AFNNLMSLYM L PE+VP L+QEM+ +NI L +YNI + SY+CL DIE E+V +E+ N + DWTT+SNLA YVKAGL EKAES L+K+EEE MG R R +H+ +SLYAG SNL KVH +W L F ++ S L ML+ L +L+D++G K+ FEEWES+CS+YD RL AIG YLK+ MI EAE V + + KR G W W+ M +L+K Q+D AL C+E A+S K+NE HP PE +++ ++YFK+E DVN AE+FCK+LKKVN LDS+AY LL TYVA+ K APDMR R+ DGIE + ++E
Sbjct: 1 MMSHSRLTSAG-TSLARWLYTEAVAVEADFPASITR-----RGRQEPLYRRLSALGATGGTAGQTLNQYIRE-GKIIKKYELERCIKELRKYKRYQHALEIMEWMVMRDINFAYPDYAIHLDLISKVQGIAAAEYYFSTLPPSAKNRFTYGSLLNCYCKEKMIDKALGLFKKMDEMNIASTSLAFNNLMSLYMSLGQPERVPLLIQEMRQQNIPLGTFSYNILMHSYSCLNDIEGVERVIKEMEEKN-EKEIDWTTYSNLAAVYVKAGLREKAESALKKVEEE---MGPR-NRSAYHFSISLYAGISNLRKVHNVWNSLNVDFPTTNNMSYLVMLQALDKLNDIDGLKRCFEEWESSCSSYDMRLANVAIGAYLKNDMIMEAESVLNEVNKRSKGPFCWAWEMFMMFFLKKHQIDSALKCMEAAVSAAKDNEWHPKPESIDKFLKYFKEEKDVNGAEEFCKMLKKVNHLDSKAYHSLLRTYVASGKPAPDMRRRMEADGIEMNLDIE 495
HSP 2 Score: 271.552 bits (693), Expect = 2.891e-77
Identity = 147/260 (56.54%), Postives = 186/260 (71.54%), Query Frame = 0
Query: 824 TRYLCTAVTEKQPAAPARSKKSGRERSDGLYNRLSALGRSGGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDRSTYGALLNCYCREKLAEKAQTLFEKMDSMHIVS-SLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLAAAYVRAGLKEKAESGLKK 1082
R+L T + PA + GR+ + LY RLSALG +GG+A TLN+Y EG +KYEL+ CI +LR++ + HAL++MEWM R I F D+A LDL+SKV+GI+AAE YFS LP SAK+R TYG+LLNCYC+EK+ +KA LF+KMD M+I S SL FNNLMSL M PE V L+QEM+ +N+PLG +YNI M SYS +NDIEGVERV +EM+ N +E + WT YSNLAA YV+AGL+EKAES LKK
Sbjct: 15 ARWLYTEAVAVEADFPASITRRGRQ--EPLYRRLSALGATGGTAGQTLNQYIREGKIIKKYELERCIKELRKYKRYQHALEIMEWMVMRDINFAYPDYAIHLDLISKVQGIAAAEYYFSTLPPSAKNRFTYGSLLNCYCKEKMIDKALGLFKKMDEMNIASTSLAFNNLMSLYMSLGQPERVPLLIQEMRQQNIPLGTFSYNILMHSYSCLNDIEGVERVIKEMEEKNEKEID-WTTYSNLAAVYVKAGLREKAESALKK 271
HSP 3 Score: 187.963 bits (476), Expect = 3.025e-48
Identity = 98/186 (52.69%), Postives = 133/186 (71.51%), Query Frame = 0
Query: 10 TLQVMEWMNKSGNGFAPTDTAKYLDLTAKVKGISAAEYYFNGLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEMDKMGIVST-IAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKK 194
L++MEWM FA D A +LDL +KV+GI+AAEYYF+ L PS ++ YG+LLNC+C+ + DKA LF +MD+M I ST +AFNNLM+LYM + QPE+VP LIQE++ +N+PL FSY++ M SYS LNDI+ VERV +E+ ++ DWT SNLA+ YV GL EKAE LK++E++
Sbjct: 91 ALEIMEWMVMRDINFAYPDYAIHLDLISKVQGIAAAEYYFSTLPPSAKNRFTYGSLLNCYCKEKMIDKALGLFKKMDEMNIASTSLAFNNLMSLYMSLGQPERVPLLIQEMRQQNIPLGTFSYNILMHSYSCLNDIEGVERVIKEMEEK-NEKEIDWTTYSNLAAVYVKAGLREKAESALKKVEEE 275
HSP 4 Score: 152.14 bits (383), Expect = 4.013e-36
Identity = 102/286 (35.66%), Postives = 155/286 (54.20%), Query Frame = 0
Query: 950 DRSTYGALLNCYCREKLAEKAQTLFEKMD---------SMHIVSSL--TFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYS-NLAAAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRCKGPFYQHCKPLILYYLDKSQVDLALGCLKAALCEVKDNERHQTYEDVKSFVMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMRCRIMDDGIEITSELEKLLERVCP 1223
D +TY L Y + L EKA++ +K++ + H SL +NL + N P M +Y + + + ++NDI+G++R FEE + +S ++Y LA + A LK N +I EAE V++ + KR KGPF + ++++L K Q+D AL C++AA+ KDNE H E + F ++YFK+E++V GAE+ CK+LK + LD +AY LL TYVA+ K AP+MR R+ DGIE+ ++E LLERVCP
Sbjct: 245 DWTTYSNLAAVYVKAGLREKAESALKKVEEEMGPRNRSAYHFSISLYAGISNLRKVHNVWNSLNVDFPTTNNM----------SYLVMLQALDKLNDIDGLKRCFEEWE-------SSCSSYDMRLANVAIGAYLK---------NDMIMEAESVLNEVNKRSKGPFCWAWEMFMMFFLKKHQIDSALKCMEAAVSAAKDNEWHPKPESIDKF-LKYFKEEKDVNGAEEFCKMLKKVNHLDSKAYHSLLRTYVASGKPAPDMRRRMEADGIEMNLDIENLLERVCP 503
HSP 5 Score: 149.443 bits (376), Expect = 2.512e-35
Identity = 88/246 (35.77%), Postives = 136/246 (55.28%), Query Frame = 0
Query: 62 YGALLNCFCQGGLEDKAHALFVEMDK-MGIVSTIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPL-DMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCEGPYYRYWEMLMSYYLEKHEIDTALECLEAAISEGKNNEWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSLLEIYAGASQ 305
Y L + + GL +KA + ++++ MG + A++ ++LY I KV + L N + P + SY V + + LNDI ++R FEE +YD + + AY+ K+DM EA V V KR +GP+ WEM M ++L+KH+ID+AL+C+EAA+S K+NEWHP PE +++F++YFK++ D NGAE FCK+L+K+ LD Y SLL Y + +
Sbjct: 249 YSNLAAVYVKAGLREKAESALKKVEEEMGPRNRSAYHFSISLYAGISNLRKVHNVWNSL-NVDFPTTNNMSYLVMLQALDKLNDIDGLKRCFEEWE--SSCSSYDMRLANVAIGAYL-----------------KNDMIMEAESVLNEVNKRSKGPFCWAWEMFMMFFLKKHQIDSALKCMEAAVSAAKDNEWHPKPESIDKFLKYFKEEKDVNGAEEFCKMLKKVNHLDSKAYHSLLRTYVASGK 474
BLAST of DCAR_018288 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6YVG8 ((Uncharacterized protein {ECO:0000313|EMBL:MPA35830.1}) (Fragment))
HSP 1 Score: 463.381 bits (1191), Expect = 2.309e-148
Identity = 257/506 (50.79%), Postives = 338/506 (66.80%), Query Frame = 0
HSP 2 Score: 267.314 bits (682), Expect = 1.211e-75
Identity = 157/278 (56.47%), Postives = 188/278 (67.63%), Query Frame = 0
HSP 3 Score: 173.711 bits (439), Expect = 2.038e-43
Identity = 96/186 (51.61%), Postives = 125/186 (67.20%), Query Frame = 0
HSP 4 Score: 147.132 bits (370), Expect = 1.838e-34
Identity = 96/277 (34.66%), Postives = 158/277 (57.04%), Query Frame = 0
HSP 5 Score: 143.28 bits (360), Expect = 3.931e-33
Identity = 83/245 (33.88%), Postives = 134/245 (54.69%), Query Frame = 0
Match: A0A5B6YVG8 ((Uncharacterized protein {ECO:0000313|EMBL:MPA35830.1}) (Fragment))
HSP 1 Score: 463.381 bits (1191), Expect = 2.309e-148
Identity = 257/506 (50.79%), Postives = 338/506 (66.80%), Query Frame = 0
Query: 308 LFNPSRLFSATPSSLVRYVCTAVKMEHDAAAAAATVQKVVKLKRDVLYLQLSAPDSSKASTLDTLNLFFPEKDDFTSKFQLNSCILQLRRSGKVLRALQVMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIAKDISTYGALLNCYCREKLTDKALNLFEKMDTMQFLSS-VAFNNLMSLYMRLNMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITHNNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKPFHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVNGFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNGNTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLMEYFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRIMDDGIEASPELE 812
+ N SR SA +SL R++CTA AA + LY +LSA + S TLN + E F K++L CI +LR+ G+ AL++MEWM R+I F D+A +LDL+S+ GI+AAEN+F+G+ AK+ TYGALLNCYC+EK+TDKAL LFEKMD M S+ +AFNNLMSLYMRL PEKVPPL Q MK RNI+ S +YNI + S CL DI E V EE+ N + DWTT+SNLA YV+AGL+EKAE L+K+EEE MG R R+ +H+L+SLYAG SNLDKV+ W LKS F ++ S L ML+ LA+L+D++G KK FEEWES+ S+YD RL AI YL+ MI+EAE VF +KR +G + W+ + +L+ Q+D AL C+E A+S VK N P+PE VN+ ++YF+++GDV+ E+FCK+L KVN LDS+AY +LL+TY+AA+K APDMR R+ DGIE S ELE
Sbjct: 9 MINSSRPISAG-ASLARWLCTAAAEVEVAAVTKPG-------REGRLYRRLSALGVTGGSVAQTLNQYIRE-GRFAKKYELERCIRELRKYGRFQHALEIMEWMEMRDINFSYRDYAVRLDLVSKAWGIAAAENYFSGLSPSAKNQFTYGALLNCYCKEKMTDKALALFEKMDEMNIASTTLAFNNLMSLYMRLGQPEKVPPLFQVMKQRNISPSTFSYNILMHSCGCLNDIVGVESVIEEMKKEN-EEECDWTTYSNLAAVYVRAGLHEKAELALKKVEEE---MGPR-DREAYHFLISLYAGISNLDKVYHAWNSLKSGFPRVNNISYLVMLQALAKLNDIDGLKKCFEEWESSSSSYDMRLANVAISAYLRSDMIKEAESVFSGAMKRSSGPFYKAWEYFIAFFLKNHQMDSALKCMEAAVSGVKENAWRPSPESVNKFLKYFEEKGDVDGVEEFCKMLNKVNCLDSKAYNILLQTYIAAAKTAPDMRQRMEGDGIEMSCELE 500
HSP 2 Score: 267.314 bits (682), Expect = 1.211e-75
Identity = 157/278 (56.47%), Postives = 188/278 (67.63%), Query Frame = 0
Query: 813 ERRRFPSSSPP-------TRYLCTAVTEKQPAAPARSKKSGRERSDGLYNRLSALGRSGGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDRSTYGALLNCYCREKLAEKAQTLFEKMDSMHIVS-SLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLAAAYVRAGLKEKAESGLKK 1082
ERR +SS P R+LCTA E + AA + + GR LY RLSALG +GGS TLN+Y EG +A+KYEL+ CI +LR++G+ HAL++MEWM+ R I F D+A LDLVSK GI+AAENYFSGL SAK++ TYGALLNCYC+EK+ +KA LFEKMD M+I S +L FNNLMSL MR PE V PL Q MK RN+ +YNI M S +NDI GVE V EEM+ N EE + WT YSNLAA YVRAGL EKAE LKK
Sbjct: 5 ERREMINSSRPISAGASLARWLCTAAAEVEVAAVTKPGREGR-----LYRRLSALGVTGGSVAQTLNQYIREGRFAKKYELERCIRELRKYGRFQHALEIMEWMEMRDINFSYRDYAVRLDLVSKAWGIAAAENYFSGLSPSAKNQFTYGALLNCYCKEKMTDKALALFEKMDEMNIASTTLAFNNLMSLYMRLGQPEKVPPLFQVMKQRNISPSTFSYNILMHSCGCLNDIVGVESVIEEMKKENEEECD-WTTYSNLAAVYVRAGLHEKAELALKK 276
HSP 3 Score: 173.711 bits (439), Expect = 2.038e-43
Identity = 96/186 (51.61%), Postives = 125/186 (67.20%), Query Frame = 0
Query: 10 TLQVMEWMNKSGNGFAPTDTAKYLDLTAKVKGISAAEYYFNGLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEMDKMGIVS-TIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKK 194
L++MEWM F+ D A LDL +K GI+AAE YF+GL PS ++ YGALLNC+C+ + DKA ALF +MD+M I S T+AFNNLM+LYM++ QPEKVP L Q +K RN+ FSY++ M S LNDI VE V EE+ ++ DWT SNLA+ YV GL EKAEL LK++E++
Sbjct: 96 ALEIMEWMEMRDINFSYRDYAVRLDLVSKAWGIAAAENYFSGLSPSAKNQFTYGALLNCYCKEKMTDKALALFEKMDEMNIASTTLAFNNLMSLYMRLGQPEKVPPLFQVMKQRNISPSTFSYNILMHSCGCLNDIVGVESVIEEMKKEN-EEECDWTTYSNLAAVYVRAGLHEKAELALKKVEEE 280
HSP 4 Score: 147.132 bits (370), Expect = 1.838e-34
Identity = 96/277 (34.66%), Postives = 158/277 (57.04%), Query Frame = 0
Query: 950 DRSTYGALLNCYCREKLAEKAQTLFEKMDS-MHIVSSLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLA-AAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRCKGPFYQHCKPLILYYLDKSQVDLALGCLKAALCEVKDNERHQTYEDVKSFVMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMRCRIMDDGIEITSELEKLLERVCPE 1224
D +TY L Y R L EKA+ +K++ M ++ L+SL + + V +K+ + +Y + + + +++NDI+G+++ FEE + ++ +N+A +AY+R+ + IKEAE V +KR GPFY+ + I ++L Q+D AL C++AA+ VK+N + E V F ++YF+++ +V G E+ CK+L + LD +AY +LL+TY+AA+K AP+MR R+ DGIE++ ELE LLERVCPE
Sbjct: 250 DWTTYSNLAAVYVRAGLHEKAELALKKVEEEMGPRDREAYHFLISLYAGISNLDKVYHAWNSLKSGFPRVNNISYLVMLQALAKLNDIDGLKKCFEEWESSSSSYD---MRLANVAISAYLRSDM-------------IKEAESVFSGAMKRSSGPFYKAWEYFIAFFLKNHQMDSALKCMEAAVSGVKENAWRPSPESVNKF-LKYFEEKGDVDGVEEFCKMLNKVNCLDSKAYNILLQTYIAAAKTAPDMRQRMEGDGIEMSCELENLLERVCPE 509
HSP 5 Score: 143.28 bits (360), Expect = 3.931e-33
Identity = 83/245 (33.88%), Postives = 134/245 (54.69%), Query Frame = 0
Query: 62 YGALLNCFCQGGLEDKAH-ALFVEMDKMGIVSTIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCEGPYYRYWEMLMSYYLEKHEIDTALECLEAAISEGKNNEWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSLLEIYAGASQ 305
Y L + + GL +KA AL ++MG A++ L++LY I +KV LK+ ++ SY V + + + LNDI +++ FEE +YD + + SAY+ + DM +EA VF +KR GP+Y+ WE ++++L+ H++D+AL+C+EAA+S K N W P+PE VN+F++YF++ D +G E FCK+L K+ LD Y LL+ Y A++
Sbjct: 254 YSNLAAVYVRAGLHEKAELALKKVEEEMGPRDREAYHFLISLYAGISNLDKVYHAWNSLKSGFPRVNNISYLVMLQALAKLNDIDGLKKCFEEWESS--SSSYDMRLANVAISAYL-----------------RSDMIKEAESVFSGAMKRSSGPFYKAWEYFIAFFLKNHQMDSALKCMEAAVSGVKENAWRPSPESVNKFLKYFEEKGDVDGVEEFCKMLNKVNCLDSKAYNILLQTYIAAAK 479
BLAST of DCAR_018288 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068VBK1 ((Uncharacterized protein {ECO:0000313|EMBL:CDP17058.1}))
HSP 1 Score: 463.381 bits (1191), Expect = 2.427e-148
Identity = 252/493 (51.12%), Postives = 331/493 (67.14%), Query Frame = 0
HSP 2 Score: 263.077 bits (671), Expect = 3.709e-74
Identity = 142/260 (54.62%), Postives = 175/260 (67.31%), Query Frame = 0
HSP 3 Score: 198.364 bits (503), Expect = 8.144e-52
Identity = 106/222 (47.75%), Postives = 144/222 (64.86%), Query Frame = 0
HSP 4 Score: 132.494 bits (332), Expect = 1.321e-29
Identity = 104/340 (30.59%), Postives = 173/340 (50.88%), Query Frame = 0
HSP 5 Score: 120.553 bits (301), Expect = 1.115e-25
Identity = 74/254 (29.13%), Postives = 129/254 (50.79%), Query Frame = 0
Match: A0A068VBK1 ((Uncharacterized protein {ECO:0000313|EMBL:CDP17058.1}))
HSP 1 Score: 463.381 bits (1191), Expect = 2.427e-148
Identity = 252/493 (51.12%), Postives = 331/493 (67.14%), Query Frame = 0
Query: 321 SLVRYVCTAVKMEHDAAAAAATVQKVVKLKRDVLYLQLSAPDSSKASTLDTLNLFFPEKDDFTSKFQLNSCILQLRRSGKVLRALQVMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIAKDISTYGALLNCYCREKLTDKALNLFEKMDTMQFL-SSVAFNNLMSLYMRLNMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITHNNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKPFHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVNGFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNGNTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLMEYFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRIMDDGIEASPELE 812
+L R V TAV +E + T Q+ + + LY +LSA + K T+N + E K +L CI +LRR G+ +AL+ MEWM TRN+K DHA +LDLI + +GI AAE++FNG+P AK+ TYGALLNCYC EK+ DKAL+LF++M MQ SS+AFNN+MSLYMRL PEKVPPLV EMK R I LS TYNI++ SY+CL DIE E+VFEEI G ++DWTTFSNLAVAYV AGL EKA L+K+E+E MG R R+ FHYLLSLYA T+N+ +VH+IWK L+S+ ++ S L +L+ L +L+DV+G + F+EWESTCS+YD RL AIG YL+H M E+AE VFH+ LKR +G + +M +YL+ + + AL C+E AIS + +E P + + + + ++E DV+ AE+FCK LKKVN L+ YK LL+TYVAA+K AP MR RI DGIE ELE
Sbjct: 20 ALTRGVSTAVNVEKE------TTQQPGRERN--LYKRLSALGAKKGLVGATINEYLRE-GRVPHKQELMRCIKELRRFGRHHQALETMEWMDTRNVKLSHRDHATRLDLICKTQGIDAAEDYFNGLPPSAKNQFTYGALLNCYCVEKMKDKALDLFDEMHQMQIAPSSLAFNNVMSLYMRLGQPEKVPPLVDEMKKRKIPLSTFTYNIFMHSYSCLDDIEGVERVFEEIMQEGGK-RYDWTTFSNLAVAYVNAGLNEKAVLALKKVEQE---MGPR-NREAFHYLLSLYARTANIGEVHRIWKSLRSSLPTVTNLSYLTLLQALNKLNDVHGLQNCFQEWESTCSSYDIRLANLAIGAYLRHDMAEDAESVFHSALKRSSGPFFVAREMLMMYYLKNRNIRLALQCMEAAISELDGSEWQPKSDSICKFLTVCEEEKDVDSAEEFCKYLKKVNCLNHRGYKSLLQTYVAAAKTAPYMRTRIEGDGIEICSELE 498
HSP 2 Score: 263.077 bits (671), Expect = 3.709e-74
Identity = 142/260 (54.62%), Postives = 175/260 (67.31%), Query Frame = 0
Query: 824 TRYLCTAVTEKQPAAPARSKKSGRERSDGLYNRLSALGRSGGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDRSTYGALLNCYCREKLAEKAQTLFEKMDSMHIV-SSLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLAAAYVRAGLKEKAESGLKK 1082
TR + TAV ++ +++ GRER+ LY RLSALG G T+N+Y EG K EL CI +LRRFG+ AL+ MEWM TR +K DHA LDL+ K +GI AAE+YF+GLP SAK++ TYGALLNCYC EK+ +KA LF++M M I SSL FNN+MSL MR PE V PLV EMK R +PL TYNI+M SYS ++DIEGVERVFEE+ + G ++ WT +SNLA AYV AGL EKA LKK
Sbjct: 22 TRGVSTAVNVEKET----TQQPGRERN--LYKRLSALGAKKGLVGATINEYLREGRVPHKQELMRCIKELRRFGRHHQALETMEWMDTRNVKLSHRDHATRLDLICKTQGIDAAEDYFNGLPPSAKNQFTYGALLNCYCVEKMKDKALDLFDEMHQMQIAPSSLAFNNVMSLYMRLGQPEKVPPLVDEMKKRKIPLSTFTYNIFMHSYSCLDDIEGVERVFEEI-MQEGGKRYDWTTFSNLAVAYVNAGLNEKAVLALKK 274
HSP 3 Score: 198.364 bits (503), Expect = 8.144e-52
Identity = 106/222 (47.75%), Postives = 144/222 (64.86%), Query Frame = 0
Query: 10 TLQVMEWMNKSGNGFAPTDTAKYLDLTAKVKGISAAEYYFNGLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEMDKMGIV-STIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCE-----GPYYRYWEMLMS 225
L+ MEWM+ + D A LDL K +GI AAE YFNGL PS ++ YGALLNC+C ++DKA LF EM +M I S++AFNN+M+LYM++ QPEKVP L+ E+K R +PL F+Y+++M SYS L+DI+ VERVFEE+ + G + YDWT SNLA AYVN GL+EKA L LK++E+ +M F +++ G +R W+ L S
Sbjct: 94 ALETMEWMDTRNVKLSHRDHATRLDLICKTQGIDAAEDYFNGLPPSAKNQFTYGALLNCYCVEKMKDKALDLFDEMHQMQIAPSSLAFNNVMSLYMRLGQPEKVPPLVDEMKKRKIPLSTFTYNIFMHSYSCLDDIEGVERVFEEI-MQEGGKRYDWTTFSNLAVAYVNAGLNEKAVLALKKVEQ--EMGPRNREAFHYLLSLYARTANIGEVHRIWKSLRS 312
HSP 4 Score: 132.494 bits (332), Expect = 1.321e-29
Identity = 104/340 (30.59%), Postives = 173/340 (50.88%), Query Frame = 0
Query: 895 RFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDR---STYGALLNCYCREKLAEKAQTLFEKMDS-MHIVSSLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVH-TYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAY----SNLA-AAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRCKGPFYQHCKPLILYYLDKSQVDLALGCLKAALCEVKDNERHQTYEDVKSFVMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMRCRIMDDGIEITSELEKLLERVCPE 1224
R G+ + +++ M+ RKI + F+ S + I E F + + R +T+ L Y L EKA +K++ M + F+ L+SL R V + + +++ +LP + +Y + + +++ND+ G++ F+E + ++ ++Y +NLA AY+R + E AES V + LKR GPF+ + L++YYL + LAL C++AA+ E+ +E + + F + ++E++V AE+ CK LK + L+ Y+ LL+TYVAA+K AP MR RI DGIEI SELE LL+ V PE
Sbjct: 190 RLGQPEKVPPLVDEMKKRKIPLSTFTYNIFMHSYSCLDDIEGVERVFEEIMQEGGKRYDWTTFSNLAVAYVNAGLNEKAVLALKKVEQEMGPRNREAFHYLLSLYARTANIGEVHRIWKSLRS-SLPTVTNLSYLTLLQALNKLNDVHGLQNCFQEWE-------STCSSYDIRLANLAIGAYLRHDMAEDAES-------------VFHSALKRSSGPFFVAREMLMMYYLKNRNIRLALQCMEAAISELDGSEWQPKSDSICKF-LTVCEEEKDVDSAEEFCKYLKKVNCLNHRGYKSLLQTYVAAAKTAPYMRTRIEGDGIEICSELENLLQNVSPE 507
HSP 5 Score: 120.553 bits (301), Expect = 1.115e-25
Identity = 74/254 (29.13%), Postives = 129/254 (50.79%), Query Frame = 0
Query: 62 YGALLNCFCQGGLEDKAHALFVEMDK-MGIVSTIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCEGPYYRYWEMLMSYYLEKHEIDTALECLEAAISEGKNNEWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSLLEIYAGASQIVLFNPSRL 314
+ L + GL +KA ++++ MG + AF+ L++LY + +V + + L++ + SY + + + LND+ ++ F+E +YD + + AY+ +HDM E+A VF +KR GP++ EMLM YYL+ I AL+C+EAAISE +EW P + + +F+ +++ D + AE FCK L+K+ L+H Y SLL+ Y A++ + +R+
Sbjct: 252 FSNLAVAYVNAGLNEKAVLALKKVEQEMGPRNREAFHYLLSLYARTANIGEVHRIWKSLRSSLPTVTNLSYLTLLQALNKLNDVHGLQNCFQEWESTCS--SYDIRLANLAIGAYL-----------------RHDMAEDAESVFHSALKRSSGPFFVAREMLMMYYLKNRNIRLALQCMEAAISELDGSEWQPKSDSICKFLTVCEEEKDVDSAEEFCKYLKKVNCLNHRGYKSLLQTYVAAAKTAPYMRTRI 486
BLAST of DCAR_018288 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6VAA6 ((pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like isoform X1 {ECO:0000313|RefSeq:XP_027099535.1, ECO:0000313|RefSeq:XP_027118572.1}))
HSP 1 Score: 462.611 bits (1189), Expect = 4.127e-148
Identity = 252/493 (51.12%), Postives = 325/493 (65.92%), Query Frame = 0
HSP 2 Score: 257.684 bits (657), Expect = 2.660e-72
Identity = 140/254 (55.12%), Postives = 167/254 (65.75%), Query Frame = 0
HSP 3 Score: 198.364 bits (503), Expect = 7.458e-52
Identity = 107/222 (48.20%), Postives = 144/222 (64.86%), Query Frame = 0
HSP 4 Score: 132.88 bits (333), Expect = 9.495e-30
Identity = 106/340 (31.18%), Postives = 173/340 (50.88%), Query Frame = 0
HSP 5 Score: 120.553 bits (301), Expect = 1.125e-25
Identity = 75/254 (29.53%), Postives = 128/254 (50.39%), Query Frame = 0
Match: A0A6P6VAA6 ((pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like isoform X1 {ECO:0000313|RefSeq:XP_027099535.1, ECO:0000313|RefSeq:XP_027118572.1}))
HSP 1 Score: 462.611 bits (1189), Expect = 4.127e-148
Identity = 252/493 (51.12%), Postives = 325/493 (65.92%), Query Frame = 0
Query: 321 SLVRYVCTAVKMEHDAAAAAATVQKVVKLKRDVLYLQLSAPDSSKASTLDTLNLFFPEKDDFTSKFQLNSCILQLRRSGKVLRALQVMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIAKDISTYGALLNCYCREKLTDKALNLFEKMDTMQFL-SSVAFNNLMSLYMRLNMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITHNNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKPFHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVNGFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNGNTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLMEYFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRIMDDGIEASPELE 812
+L R V TAV +E + + LY +LSA + K T+N + E K +L CI +LRR G+ +AL+ MEWM TRN+ DHA +LDLI + +GI AAE++FNG+P AK+ TYGALLNCYC EK+ DKAL+LF+KM MQ SS+AFNNLMSLYMRL PEKVPPLV EMK R I LS TYNI++ SY+CL DIE E+VFEEI G ++DWTTFSNLAVAYV AGL EKA L+K+E+E MG R R+ FHYLLSLYA T+N+ +VH+IWK L+S+ ++ S L ML+ L +L+D++G K F EWESTCS+YD RL AIG YL+H M E+AE VFH+ LKR +G + +M +YL+ + + AL C+E AIS + +E P + + + + ++E DV+ AE+FCK LKKVN L+ YK LL+TYVAA+K AP MR RI DGIE ELE
Sbjct: 19 ALTRGVRTAVNVEKET------------INERNLYKRLSALGAKKGLVGATINEYLRE-GGVPHKQELMRCIKELRRFGRHHQALETMEWMDTRNVNLSHRDHATRLDLICKTQGIDAAEDYFNGLPPSAKNQFTYGALLNCYCVEKMKDKALDLFDKMHQMQIAPSSLAFNNLMSLYMRLGQPEKVPPLVDEMKKRKIPLSTFTYNIFMHSYSCLDDIEGVERVFEEIMQEAGK-RYDWTTFSNLAVAYVNAGLNEKAVLALKKVEQE---MGPR-NREAFHYLLSLYARTANIGEVHRIWKSLRSSLPTVTNLSYLTMLQALNKLNDIHGLKNCFREWESTCSSYDIRLANLAIGAYLRHDMAEDAESVFHSALKRSSGPFFIAREMLMMYYLKNRSIRLALQCMEAAISELDGSEWQPKSDSICKFLTVCEEEKDVDSAEEFCKYLKKVNCLNHRVYKSLLQTYVAAAKTAPYMRTRIEGDGIEICSELE 493
HSP 2 Score: 257.684 bits (657), Expect = 2.660e-72
Identity = 140/254 (55.12%), Postives = 167/254 (65.75%), Query Frame = 0
Query: 830 AVTEKQPAAPARSKKSGRERSDGLYNRLSALGRSGGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDRSTYGALLNCYCREKLAEKAQTLFEKMDSMHIV-SSLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLAAAYVRAGLKEKAESGLKK 1082
A+T A K++ ER+ LY RLSALG G T+N+Y EG K EL CI +LRRFG+ AL+ MEWM TR + DHA LDL+ K +GI AAE+YF+GLP SAK++ TYGALLNCYC EK+ +KA LF+KM M I SSL FNNLMSL MR PE V PLV EMK R +PL TYNI+M SYS ++DIEGVERVFEE+ G+ + WT +SNLA AYV AGL EKA LKK
Sbjct: 19 ALTRGVRTAVNVEKETINERN--LYKRLSALGAKKGLVGATINEYLREGGVPHKQELMRCIKELRRFGRHHQALETMEWMDTRNVNLSHRDHATRLDLICKTQGIDAAEDYFNGLPPSAKNQFTYGALLNCYCVEKMKDKALDLFDKMHQMQIAPSSLAFNNLMSLYMRLGQPEKVPPLVDEMKKRKIPLSTFTYNIFMHSYSCLDDIEGVERVFEEIMQEAGKRYD-WTTFSNLAVAYVNAGLNEKAVLALKK 269
HSP 3 Score: 198.364 bits (503), Expect = 7.458e-52
Identity = 107/222 (48.20%), Postives = 144/222 (64.86%), Query Frame = 0
Query: 10 TLQVMEWMNKSGNGFAPTDTAKYLDLTAKVKGISAAEYYFNGLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEMDKMGIV-STIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCE-----GPYYRYWEMLMS 225
L+ MEWM+ + D A LDL K +GI AAE YFNGL PS ++ YGALLNC+C ++DKA LF +M +M I S++AFNNLM+LYM++ QPEKVP L+ E+K R +PL F+Y+++M SYS L+DI+ VERVFEE+ GK+ YDWT SNLA AYVN GL+EKA L LK++E+ +M F +++ G +R W+ L S
Sbjct: 89 ALETMEWMDTRNVNLSHRDHATRLDLICKTQGIDAAEDYFNGLPPSAKNQFTYGALLNCYCVEKMKDKALDLFDKMHQMQIAPSSLAFNNLMSLYMRLGQPEKVPPLVDEMKKRKIPLSTFTYNIFMHSYSCLDDIEGVERVFEEIMQEAGKR-YDWTTFSNLAVAYVNAGLNEKAVLALKKVEQ--EMGPRNREAFHYLLSLYARTANIGEVHRIWKSLRS 307
HSP 4 Score: 132.88 bits (333), Expect = 9.495e-30
Identity = 106/340 (31.18%), Postives = 173/340 (50.88%), Query Frame = 0
Query: 895 RFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDR---STYGALLNCYCREKLAEKAQTLFEKMDS-MHIVSSLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVH-TYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAY----SNLA-AAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRCKGPFYQHCKPLILYYLDKSQVDLALGCLKAALCEVKDNERHQTYEDVKSFVMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMRCRIMDDGIEITSELEKLLERVCPE 1224
R G+ + +++ M+ RKI + F+ S + I E F + + A R +T+ L Y L EKA +K++ M + F+ L+SL R V + + +++ +LP + +Y + + +++NDI G++ F E + ++ ++Y +NLA AY+R + E AES V + LKR GPF+ + L++YYL + LAL C++AA+ E+ +E + + F + ++E++V AE+ CK LK + L+ Y+ LL+TYVAA+K AP MR RI DGIEI SELE LL+ V PE
Sbjct: 185 RLGQPEKVPPLVDEMKKRKIPLSTFTYNIFMHSYSCLDDIEGVERVFEEIMQEAGKRYDWTTFSNLAVAYVNAGLNEKAVLALKKVEQEMGPRNREAFHYLLSLYARTANIGEVHRIWKSLRS-SLPTVTNLSYLTMLQALNKLNDIHGLKNCFREWE-------STCSSYDIRLANLAIGAYLRHDMAEDAES-------------VFHSALKRSSGPFFIAREMLMMYYLKNRSIRLALQCMEAAISELDGSEWQPKSDSICKF-LTVCEEEKDVDSAEEFCKYLKKVNCLNHRVYKSLLQTYVAAAKTAPYMRTRIEGDGIEICSELENLLQNVSPE 502
HSP 5 Score: 120.553 bits (301), Expect = 1.125e-25
Identity = 75/254 (29.53%), Postives = 128/254 (50.39%), Query Frame = 0
Query: 62 YGALLNCFCQGGLEDKAHALFVEMDK-MGIVSTIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCEGPYYRYWEMLMSYYLEKHEIDTALECLEAAISEGKNNEWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSLLEIYAGASQIVLFNPSRL 314
+ L + GL +KA ++++ MG + AF+ L++LY + +V + + L++ + SY + + + LNDI ++ F E +YD + + AY+ +HDM E+A VF +KR GP++ EMLM YYL+ I AL+C+EAAISE +EW P + + +F+ +++ D + AE FCK L+K+ L+H Y SLL+ Y A++ + +R+
Sbjct: 247 FSNLAVAYVNAGLNEKAVLALKKVEQEMGPRNREAFHYLLSLYARTANIGEVHRIWKSLRSSLPTVTNLSYLTMLQALNKLNDIHGLKNCFREWESTCS--SYDIRLANLAIGAYL-----------------RHDMAEDAESVFHSALKRSSGPFFIAREMLMMYYLKNRSIRLALQCMEAAISELDGSEWQPKSDSICKFLTVCEEEKDVDSAEEFCKYLKKVNCLNHRVYKSLLQTYVAAAKTAPYMRTRI 481
BLAST of DCAR_018288 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6P5M6 ((Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:PSR85938.1}))
HSP 1 Score: 460.685 bits (1184), Expect = 2.021e-147
Identity = 251/507 (49.51%), Postives = 340/507 (67.06%), Query Frame = 0
HSP 2 Score: 271.937 bits (694), Expect = 2.619e-77
Identity = 147/260 (56.54%), Postives = 186/260 (71.54%), Query Frame = 0
HSP 3 Score: 188.734 bits (478), Expect = 1.673e-48
Identity = 98/186 (52.69%), Postives = 133/186 (71.51%), Query Frame = 0
HSP 4 Score: 147.132 bits (370), Expect = 1.470e-34
Identity = 100/286 (34.97%), Postives = 153/286 (53.50%), Query Frame = 0
HSP 5 Score: 147.132 bits (370), Expect = 1.870e-34
Identity = 86/246 (34.96%), Postives = 135/246 (54.88%), Query Frame = 0
Match: A0A2R6P5M6 ((Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:PSR85938.1}))
HSP 1 Score: 460.685 bits (1184), Expect = 2.021e-147
Identity = 251/507 (49.51%), Postives = 340/507 (67.06%), Query Frame = 0
Query: 308 LFNPSRLFSATPSSLVRYVCT-AVKMEHDAAAAAATVQKVVKLKRDVLYLQLSAPDSSKASTLDTLNLFFPEKDDFTSKFQLNSCILQLRRSGKVLRALQVMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIAKDISTYGALLNCYCREKLTDKALNLFEKMDTMQFLS-SVAFNNLMSLYMRLNMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITHNNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKPFHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVNGFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNGNTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLMEYFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRIMDDGIEASPELE 812
+ + SRL SA +SL R++ T A+ +E D A+ + +++ LY +LSA ++ + TLN + E K++L CI +LR+ + AL++MEWM R+I F D+A LDLIS+V+GI+AAE +F+ +P AK+ TYG+LLNCYC+EK+ DKAL LF+KMD M S S+AFNNLMSLYM L PE+VP L+QEM+ RNI L +YNI + SY+CL DIE E+V +E+ N + DWTT+SNLA YVKAGL EKAES L+K+EEE MG R R +H+ +SLYAG SNL KVHK+W L F ++ S L ML+ L +L+D++G K+ FEEWE +CS+YD RL AIG YLK+ MI EAE V + KR G W W+ M +L+K Q+D AL C+E A+S K+NE HP P +++ ++YF++E DVN AE+FCK+LKKVN LDS+AY LL TYVA+ K APDMR R+ DGIE + ++E
Sbjct: 1 MMSHSRLASAG-TSLARWLYTEALALEADFPASITR-----RGRQEPLYRRLSALGATGGTAGQTLNQYIRE-GKIIKKYELERCIKELRKYKRYQHALEIMEWMVMRDINFAYPDYAIHLDLISKVQGIAAAEYYFSTLPPSAKNRFTYGSLLNCYCKEKMIDKALGLFKKMDEMNIASTSLAFNNLMSLYMSLGQPERVPLLIQEMRQRNIPLGTFSYNILMHSYSCLNDIEGVERVIKEMEEEN-EKEIDWTTYSNLAAVYVKAGLREKAESALQKVEEE---MGPR-NRSAYHFSISLYAGISNLRKVHKVWNSLNVDFPTTNNMSYLVMLQALDKLNDIDGLKRCFEEWELSCSSYDMRLANVAIGAYLKNDMIMEAESVLNEANKRSKGPFCWAWEMFMVFFLKKHQIDSALKCMEAAVSAAKDNEWHPKPASIDKFLKYFEEEKDVNGAEEFCKMLKKVNHLDSKAYHSLLHTYVASGKPAPDMRRRMEADGIEMNLDIE 495
HSP 2 Score: 271.937 bits (694), Expect = 2.619e-77
Identity = 147/260 (56.54%), Postives = 186/260 (71.54%), Query Frame = 0
Query: 824 TRYLCTAVTEKQPAAPARSKKSGRERSDGLYNRLSALGRSGGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDRSTYGALLNCYCREKLAEKAQTLFEKMDSMHIVS-SLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLAAAYVRAGLKEKAESGLKK 1082
R+L T + PA + GR+ + LY RLSALG +GG+A TLN+Y EG +KYEL+ CI +LR++ + HAL++MEWM R I F D+A LDL+SKV+GI+AAE YFS LP SAK+R TYG+LLNCYC+EK+ +KA LF+KMD M+I S SL FNNLMSL M PE V L+QEM+ RN+PLG +YNI M SYS +NDIEGVERV +EM+ N +E + WT YSNLAA YV+AGL+EKAES L+K
Sbjct: 15 ARWLYTEALALEADFPASITRRGRQ--EPLYRRLSALGATGGTAGQTLNQYIREGKIIKKYELERCIKELRKYKRYQHALEIMEWMVMRDINFAYPDYAIHLDLISKVQGIAAAEYYFSTLPPSAKNRFTYGSLLNCYCKEKMIDKALGLFKKMDEMNIASTSLAFNNLMSLYMSLGQPERVPLLIQEMRQRNIPLGTFSYNILMHSYSCLNDIEGVERVIKEMEEENEKEID-WTTYSNLAAVYVKAGLREKAESALQK 271
HSP 3 Score: 188.734 bits (478), Expect = 1.673e-48
Identity = 98/186 (52.69%), Postives = 133/186 (71.51%), Query Frame = 0
Query: 10 TLQVMEWMNKSGNGFAPTDTAKYLDLTAKVKGISAAEYYFNGLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEMDKMGIVST-IAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKK 194
L++MEWM FA D A +LDL +KV+GI+AAEYYF+ L PS ++ YG+LLNC+C+ + DKA LF +MD+M I ST +AFNNLM+LYM + QPE+VP LIQE++ RN+PL FSY++ M SYS LNDI+ VERV +E+ ++ DWT SNLA+ YV GL EKAE L+++E++
Sbjct: 91 ALEIMEWMVMRDINFAYPDYAIHLDLISKVQGIAAAEYYFSTLPPSAKNRFTYGSLLNCYCKEKMIDKALGLFKKMDEMNIASTSLAFNNLMSLYMSLGQPERVPLLIQEMRQRNIPLGTFSYNILMHSYSCLNDIEGVERVIKEMEEE-NEKEIDWTTYSNLAAVYVKAGLREKAESALQKVEEE 275
HSP 4 Score: 147.132 bits (370), Expect = 1.470e-34
Identity = 100/286 (34.97%), Postives = 153/286 (53.50%), Query Frame = 0
Query: 950 DRSTYGALLNCYCREKLAEKAQTLFEKMD---------SMHIVSSL--TFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYS-NLAAAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRCKGPFYQHCKPLILYYLDKSQVDLALGCLKAALCEVKDNERHQTYEDVKSFVMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMRCRIMDDGIEITSELEKLLERVCP 1223
D +TY L Y + L EKA++ +K++ + H SL +NL + N P M +Y + + + ++NDI+G++R FEE ++ S ++Y LA + A LK N +I EAE V++ KR KGPF + ++++L K Q+D AL C++AA+ KDNE H + F ++YF++E++V GAE+ CK+LK + LD +AY LL TYVA+ K AP+MR R+ DGIE+ ++E LLERVCP
Sbjct: 245 DWTTYSNLAAVYVKAGLREKAESALQKVEEEMGPRNRSAYHFSISLYAGISNLRKVHKVWNSLNVDFPTTNNM----------SYLVMLQALDKLNDIDGLKRCFEEWEL-------SCSSYDMRLANVAIGAYLK---------NDMIMEAESVLNEANKRSKGPFCWAWEMFMVFFLKKHQIDSALKCMEAAVSAAKDNEWHPKPASIDKF-LKYFEEEKDVNGAEEFCKMLKKVNHLDSKAYHSLLHTYVASGKPAPDMRRRMEADGIEMNLDIENLLERVCP 503
HSP 5 Score: 147.132 bits (370), Expect = 1.870e-34
Identity = 86/246 (34.96%), Postives = 135/246 (54.88%), Query Frame = 0
Query: 62 YGALLNCFCQGGLEDKAHALFVEMDK-MGIVSTIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPL-DMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCEGPYYRYWEMLMSYYLEKHEIDTALECLEAAISEGKNNEWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSLLEIYAGASQ 305
Y L + + GL +KA + ++++ MG + A++ ++LY I KV + L N + P + SY V + + LNDI ++R FEE L +YD + + AY+ K+DM EA V KR +GP+ WEM M ++L+KH+ID+AL+C+EAA+S K+NEWHP P +++F++YF+++ D NGAE FCK+L+K+ LD Y SLL Y + +
Sbjct: 249 YSNLAAVYVKAGLREKAESALQKVEEEMGPRNRSAYHFSISLYAGISNLRKVHKVWNSL-NVDFPTTNNMSYLVMLQALDKLNDIDGLKRCFEEWEL--SCSSYDMRLANVAIGAYL-----------------KNDMIMEAESVLNEANKRSKGPFCWAWEMFMVFFLKKHQIDSALKCMEAAVSAAKDNEWHPKPASIDKFLKYFEEEKDVNGAEEFCKMLKKVNHLDSKAYHSLLHTYVASGK 474
BLAST of DCAR_018288 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: M1AI32 ((Pentatricopeptide repeat-containing protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400023279}))
HSP 1 Score: 457.218 bits (1175), Expect = 3.378e-146
Identity = 237/461 (51.41%), Postives = 317/461 (68.76%), Query Frame = 0
HSP 2 Score: 272.707 bits (696), Expect = 8.972e-78
Identity = 137/242 (56.61%), Postives = 176/242 (72.73%), Query Frame = 0
HSP 3 Score: 199.519 bits (506), Expect = 2.611e-52
Identity = 108/222 (48.65%), Postives = 146/222 (65.77%), Query Frame = 0
HSP 4 Score: 141.739 bits (356), Expect = 1.015e-32
Identity = 103/339 (30.38%), Postives = 180/339 (53.10%), Query Frame = 0
HSP 5 Score: 125.176 bits (313), Expect = 2.575e-27
Identity = 82/268 (30.60%), Postives = 135/268 (50.37%), Query Frame = 0
Match: M1AI32 ((Pentatricopeptide repeat-containing protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400023279}))
HSP 1 Score: 457.218 bits (1175), Expect = 3.378e-146
Identity = 237/461 (51.41%), Postives = 317/461 (68.76%), Query Frame = 0
Query: 354 LYLQLSAPDSSKASTLDTLNLFFPEKDDFTSKFQLNSCILQLRRSGKVLRALQVMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIAKDISTYGALLNCYCREKLTDKALNLFEKMDTMQFLS-SVAFNNLMSLYMRLNMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITHNNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKPFHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVNGFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNGNTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLMEYFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRIMDDGIEASPELEE 813
LY +LSA ++K S +T+N + E K++L CI +LR+ + AL++MEWM R I F D+ +LDLI++V+GI+AAE +F G+ ++ STYGALLNCYC EK+ DKAL+ FEKMD ++F + S+AFNNLMSLYMRL PEKV PLVQEMK+R + L +YNIW+ SY+CL DIE E+VFEE+ N A + DWTT+SNLAVAYVKAG EKAE L+K+EEE MG R R+ +HYL+SL+A SNL +V++IW LKS+ + ++ S L ML++L++ +D++G KK +EEWES+CSTYD RL + IG YL+H M+ AE VFH+ LKR G W+ M YL K+Q++FA C+E S +K N+ P E ++ +EYF +E DV+ AE F K LKKVN L S+ Y LL TY AA++ DMR RI +DGIE S ELEE
Sbjct: 34 LYRRLSALGATKGSVTETINAYTRE-GRVVKKYELEKCIKELRKYKRYQHALEIMEWMEKRGINFSYGDYGVRLDLIAKVQGITAAEKYFGGLSPSMQNQSTYGALLNCYCVEKMADKALSFFEKMDQLKFTNKSLAFNNLMSLYMRLGQPEKVAPLVQEMKSRKVPLCTFSYNIWMNSYSCLDDIEGVERVFEELKQEN-AKECDWTTYSNLAVAYVKAGHNEKAELALKKLEEE---MGPR-NRQAYHYLISLHARISNLGEVYRIWGSLKSSLDL-TNSSYLVMLQSLSKHNDMDGLKKYYEEWESSCSTYDMRLANNVIGAYLRHDMLNNAEKVFHSALKRSQGPFFLAWEMFMLFYLRKRQINFAQQCMEAIASRIKENKWRPKYETISNFLEYFVEEKDVDGAEDFYKFLKKVNCLSSDVYSSLLRTYAAANRTTDDMRLRIKEDGIEMSCELEE 487
HSP 2 Score: 272.707 bits (696), Expect = 8.972e-78
Identity = 137/242 (56.61%), Postives = 176/242 (72.73%), Query Frame = 0
Query: 842 SKKSGRERSDGLYNRLSALGRSGGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDRSTYGALLNCYCREKLAEKAQTLFEKMDSMHIVS-SLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLAAAYVRAGLKEKAESGLKK 1082
+++SGR+ LY RLSALG + GS +T+N Y EG +KYEL+ CI +LR++ + HAL++MEWM+ R I F D+ LDL++KV+GI+AAE YF GL S +++STYGALLNCYC EK+A+KA + FEKMD + + SL FNNLMSL MR PE V PLVQEMK+R +PL +YNIWM SYS ++DIEGVERVFEE++ N +E + WT YSNLA AYV+AG EKAE LKK
Sbjct: 25 AEQSGRD--SRLYRRLSALGATKGSVTETINAYTREGRVVKKYELEKCIKELRKYKRYQHALEIMEWMEKRGINFSYGDYGVRLDLIAKVQGITAAEKYFGGLSPSMQNQSTYGALLNCYCVEKMADKALSFFEKMDQLKFTNKSLAFNNLMSLYMRLGQPEKVAPLVQEMKSRKVPLCTFSYNIWMNSYSCLDDIEGVERVFEELKQENAKECD-WTTYSNLAVAYVKAGHNEKAELALKK 263
HSP 3 Score: 199.519 bits (506), Expect = 2.611e-52
Identity = 108/222 (48.65%), Postives = 146/222 (65.77%), Query Frame = 0
Query: 10 TLQVMEWMNKSGNGFAPTDTAKYLDLTAKVKGISAAEYYFNGLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEMDKMGIVS-TIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVK---RCE--GPYYRYWEMLMS 225
L++MEWM K G F+ D LDL AKV+GI+AAE YF GL PS ++ YGALLNC+C + DKA + F +MD++ + ++AFNNLM+LYM++ QPEKV L+QE+K+R +PL FSY++WM SYS L+DI+ VERVFEE+ K+ DWT SNLA AYV G +EKAEL LK+LE+ +M + + +++ R G YR W L S
Sbjct: 83 ALEIMEWMEKRGINFSYGDYGVRLDLIAKVQGITAAEKYFGGLSPSMQNQSTYGALLNCYCVEKMADKALSFFEKMDQLKFTNKSLAFNNLMSLYMRLGQPEKVAPLVQEMKSRKVPLCTFSYNIWMNSYSCLDDIEGVERVFEELKQENAKEC-DWTTYSNLAVAYVKAGHNEKAELALKKLEE--EMGPRNRQAYHYLISLHARISNLGEVYRIWGSLKS 301
HSP 4 Score: 141.739 bits (356), Expect = 1.015e-32
Identity = 103/339 (30.38%), Postives = 180/339 (53.10%), Query Frame = 0
Query: 895 RFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLP-ESAK--DRSTYGALLNCYCREKLAEKAQTLFEKMDS-MHIVSSLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAY-----SNLAAAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRCKGPFYQHCKPLILYYLDKSQVDLALGCLKAALCEVKDNERHQTYEDVKSFVMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMRCRIMDDGIEITSELEKLLERVCPE 1224
R G+ + +++ M++RK+ + +++ S + I E F L E+AK D +TY L Y + EKA+ +K++ M + ++ L+SL R + V + +K+ +L L +Y + + S S+ ND++G+++ +EE + +S + Y +N+ AY+R + ++ AE V + LKR +GPF+ + +L+YL K Q++ A C++A +K+N+ YE + +F +EYF +E++V GAE K LK + L + Y LL TY AA++ +MR RI +DGIE++ ELE+LL+ VCPE
Sbjct: 179 RLGQPEKVAPLVQEMKSRKVPLCTFSYNIWMNSYSCLDDIEGVERVFEELKQENAKECDWTTYSNLAVAYVKAGHNEKAELALKKLEEEMGPRNRQAYHYLISLHARISNLGEVYRIWGSLKS-SLDLTNSSYLVMLQSLSKHNDMDGLKKYYEEWE-------SSCSTYDMRLANNVIGAYLR-------------HDMLNNAEKVFHSALKRSQGPFFLAWEMFMLFYLRKRQINFAQQCMEAIASRIKENKWRPKYETISNF-LEYFVEEKDVDGAEDFYKFLKKVNCLSSDVYSSLLRTYAAANRTTDDMRLRIKEDGIEMSCELEELLKSVCPE 495
HSP 5 Score: 125.176 bits (313), Expect = 2.575e-27
Identity = 82/268 (30.60%), Postives = 135/268 (50.37%), Query Frame = 0
Query: 42 ISAAEYYFNGLLPSEIHKC---AYGALLNCFCQGGLEDKAHALFVEMDK-MGIVSTIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCEGPYYRYWEMLMSYYLEKHEIDTALECLEAAISEGKNNEWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSLLEIYAGASQ 305
I E F L +C Y L + + G +KA ++++ MG + A++ L++L+ +I +V + LK+ ++ L SY V + S S ND+ +++ +EE YD + +N+ AY+ +HDM A +VF +KR +GP++ WEM M +YL K +I+ A +C+EA S K N+W P E ++ F+EYF ++ D +GAE F K L+K+ L Y+SLL YA A++
Sbjct: 218 IEGVERVFEELKQENAKECDWTTYSNLAVAYVKAGHNEKAELALKKLEEEMGPRNRQAYHYLISLHARISNLGEVYRIWGSLKS-SLDLTNSSYLVMLQSLSKHNDMDGLKKYYEEWE--SSCSTYDMRLANNVIGAYL-----------------RHDMLNNAEKVFHSALKRSQGPFFLAWEMFMLFYLRKRQINFAQQCMEAIASRIKENKWRPKYETISNFLEYFVEEKDVDGAEDFYKFLKKVNCLSSDVYSSLLRTYAAANR 465
BLAST of DCAR_018288 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4D8Y6Y5 ((Uncharacterized protein {ECO:0000313|EMBL:TEY14792.1}))
HSP 1 Score: 470.7 bits (1210), Expect = 6.833e-146
Identity = 294/867 (33.91%), Postives = 475/867 (54.79%), Query Frame = 0
HSP 2 Score: 422.165 bits (1084), Expect = 1.029e-127
Identity = 258/698 (36.96%), Postives = 373/698 (53.44%), Query Frame = 0
HSP 3 Score: 200.675 bits (509), Expect = 4.298e-50
Identity = 143/443 (32.28%), Postives = 218/443 (49.21%), Query Frame = 0
HSP 4 Score: 77.411 bits (189), Expect = 1.181e-11
Identity = 66/273 (24.18%), Postives = 132/273 (48.35%), Query Frame = 0
Match: A0A4D8Y6Y5 ((Uncharacterized protein {ECO:0000313|EMBL:TEY14792.1}))
HSP 1 Score: 470.7 bits (1210), Expect = 6.833e-146
Identity = 294/867 (33.91%), Postives = 475/867 (54.79%), Query Frame = 0
Query: 13 VMEWMNKSGNGFAPTDTAKYLDLTAKVKGISAAEYYFNGLLPSEIHKCAYGALLNCFCQGGLEDKAHALFVEM-DKMGIVSTIAFNNLMTLYMKIHQPEKVPALIQELKNRNMPLDMFSYSVWMGSYSSLNDIKAVERVFEEVNLIYGKQNYDWTIISNLASAYVNVGLDEKAELTLKELEKKHDMTEEAGRVFEHVVKRCEGPY------------YRYWEMLMSYY-----------LEKH----------EIDTALECLEAAISEGKNNEWHPTPEDVNRFMEYFKKDNDANGAEMFCKILRKLQPLDHGTYTSLLEIYAGASQIVLFNPSRLFSATPSSLVRYVCTAVKMEHDAAAAAATVQKVVKLKRDV-------LYLQLSA---PDSSKASTLDTLNLFFPEKDDFTSKFQLNSCILQLRR-----------SGKVLRALQ----------VMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIAKDISTYGALLNCYCREKLTDKALNLFEKMDTMQFLSS-VAFNNLMSLYMRLNMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITHNNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKPFHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVNGFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNGNTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLMEYFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRIMDDGIEASPELEE 813
+MEW+ F + A LDLTAK KGI+AAE YFN L PS++ C YG+LLNC+C + D+A +F +M ++ +V ++ FNNLM++Y ++ Q EKV L +E+K N+ D +Y++ M S+++LNDI+ ERVFE++ L GKQ +WT SNLA+ Y+ VG EKA+L L+ +EK+ D + + ++ G Y+ WE + S Y +H EI AL+ +E A S N+W P E +++F+ YFK+++D + AE F +++++ +D Y SL+E Y + + +L +R+ A L + + A A+ + ++ K L+ +LSA D AS +D + ++ +K +L+ I RR S V LQ V EWM + + +P D+A L I++VKGI+AAEN+FN +P ++ TY LLNCYC EK+ DKAL+LF+KM + + V FN+LM +++RL PEK L +E+K NI + T N+ ++SY+ L D + E+V +E++ N + +WTT+S+LA YV+AG +EKA L+ +E+EI R +++++S+YA +LD VH++WK LKS + + + + M+ TL L+D++G K+ FEEWE CS YD RLP IG YL+H EEAE V ++L + G+ + + + YL++ + A+ ++ S N+ P + ++ ++ FK E DV AE+ +++K++N ++ YK+L++ Y A ++ ++R RI DG+E S ELE+
Sbjct: 49 IMEWIELRKFNFNHCNYATRLDLTAKAKGIAAAEEYFNSLSPSKVVHCVYGSLLNCYCNEKMADRALDIFAKMVEQSMVVKSLPFNNLMSMYCRLGQYEKVLILGEEMKKGNIKPDTCTYNLLMNSHANLNDIEGAERVFEDMKLENGKQ-CNWTSYSNLANIYIKVGYQEKAKLALQNVEKEMDSHDR--EAYHFLISLYAGALGNLGDIVGMTKCYKEWEAVCSSYNLKLAVAVIRAYLRHDMGEEAETVLEIRPALQHMETATSIAHENKWQPRSETIDKFLNYFKQESDVSLAEEFYHLMKRVNCVDSRLYESLIETYKASGEAMLNMRARM-EADGVELSSDIEQLLPSPSRLRAGASALVRIFSPKPRTPPKQELNLFKRLSAVGYTDGEVASAIDD----YTKEGKIVNKAELDQYIKAFRRFKRYRHILEMVSCLVFEELQPIVDVATLNNVGEWMAQKFV-LKPKDNAIHLWAIAKVKGIAAAENYFNDLPPSSRVRCTYEKLLNCYCTEKMDDKALDLFKKMIEQNMIETPVPFNHLMMMHIRLGEPEKTIRLGEELKKANIEPNTSTCNLLMSSYSYLNDFDGVERVLKEMSAKNNKLV-NWTTYSHLANIYVQAGDHEKARMALKALEKEIGGHE----RVAYNFMISIYARMGDLDNVHRVWKSLKSGCNVIWNMNYITMIRTLDNLNDIDGLKECFEEWEKVCSNYDARLPSTVIGAYLRHDRPEEAESVLQSMLGKSKGHFFYACETFVHFYLKRHGVKQAMKIMDKVTSEAVNHGWKPRQDTIDGFLDCFKLESDVRGAEELYELMKRINCVNDHFYKMLIQIYAGAGQKLGNVRERIERDGVETSSELED 901
HSP 2 Score: 422.165 bits (1084), Expect = 1.029e-127
Identity = 258/698 (36.96%), Postives = 373/698 (53.44%), Query Frame = 0
Query: 407 VMEWMHTRNIKFEPTDHARQLDLISQVKGISAAENHFNGIPEIAKDISTYGALLNCYCREKLTDKALNLFEKM-DTMQFLSSVAFNNLMSLYMRLNMPEKVPPLVQEMKNRNIALSVHTYNIWITSYTCLKDIEAAEKVFEEITHNNGAVQHDWTTFSNLAVAYVKAGLYEKAESTLEKMEEEIRKMGKRCGRKPFHYLLSLYAGTSNLDKVHKIWKHLKSAFKMDSDKSTLAMLETLARLDDVNGFKKIFEEWESTCSTYDRRLPYHAIGFYLKHGMIEEAEMVFHNILKRYNGNTHWFWKRVMQHYLEKQQLDFALSCLETAISVVKNNELHPTPEDVNRLMEYFKKEGDVNKAEKFCKILKKVNLLDSEAYKLLLETYVAASKEAPDMRNRIMDDGIEASPELEERRRFPSSSPPTRYLCTAVTEKQPAAPARSKKSGRERSDGLYNRLSALGRSGGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKADHALQ---------------------VMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDRSTYGALLNCYCREKLAEKAQTLFEKMDSMHIVSS-LTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLAAAYVRAGLKEKAESGLK 1081
+MEW+ R F ++A +LDL ++ KGI+AAE +FN + YG+LLNCYC EK+ D+AL++F KM + + S+ FNNLMS+Y RL EKV L +EMK NI TYN+ + S+ L DIE AE+VFE++ NG Q +WT++SNLA Y+K G EKA+ L+ +E+E+ R+ +H+L+SLYAG L L D+ G K ++EWE+ CS+Y+ +L I YL+H M EEAE V ++ AL +ETA S+ N+ P E +++ + YFK+E DV+ AE+F ++K+VN +DS Y+ L+ETY A+ + +MR R+ DG+E S ++E+ PS + +P P + + + L+ RLSA+G + G ++ Y EG K ELD I RRF + H L+ V EWM +K P D+A L ++KVKGI+AAENYF+ LP S++ R TY LLNCYC EK+ +KA LF+KM +++ + + FN+LM + +R PE I L +E+K N+ T N+ M+SYS +ND +GVERV +EM N + N WT YS+LA YV+AG EKA LK
Sbjct: 49 IMEWIELRKFNFNHCNYATRLDLTAKAKGIAAAEEYFNSLSPSKVVHCVYGSLLNCYCNEKMADRALDIFAKMVEQSMVVKSLPFNNLMSMYCRLGQYEKVLILGEEMKKGNIKPDTCTYNLLMNSHANLNDIEGAERVFEDMKLENGK-QCNWTSYSNLANIYIKVGYQEKAKLALQNVEKEMDSHD----REAYHFLISLYAGA-------------------------------LGNLGDIVGMTKCYKEWEAVCSSYNLKLAVAVIRAYLRHDMGEEAETVL--------------------------EIRPALQHMETATSIAHENKWQPRSETIDKFLNYFKQESDVSLAEEFYHLMKRVNCVDSRLYESLIETYKASGEAMLNMRARMEADGVELSSDIEQLLPSPSRLRAGASALVRIFSPKPRTPPKQELN-------LFKRLSAVGYTDGEVASAIDDYTKEGKIVNKAELDQYIKAFRRFKRYRHILEMVSCLVFEELQPIVDVATLNNVGEWM-AQKFVLKPKDNAIHLWAIAKVKGIAAAENYFNDLPPSSRVRCTYEKLLNCYCTEKMDDKALDLFKKMIEQNMIETPVPFNHLMMMHIRLGEPEKTIRLGEELKKANIEPNTSTCNLLMSSYSYLNDFDGVERVLKEMSAKNNKLVN-WTTYSHLANIYVQAGDHEKARMALK 675
HSP 3 Score: 200.675 bits (509), Expect = 4.298e-50
Identity = 143/443 (32.28%), Postives = 218/443 (49.21%), Query Frame = 0
Query: 815 RRFPSSSPP-TRYLCTAVTEKQPAAPARSKKSGRERSDGLYNRLSALGRSGGSAIDTLNKYFSEGNYARKYELDTCIWQLRRFGKADHALQVMEWMQTRKIKFHPTDHAKFLDLVSKVKGISAAENYFSGLPESAKDRSTYGALLNCYCREKLAEKAQTLFEKM-DSMHIVSSLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAYSNLAAAYVRAGLKEKAESGLKK--------------------NGLIKEAEDVIDNILKRCKGPFYQHCK--------PLILYYLDKS---------QVDLALGCLKAALCEVKDNERHQTYEDVKSFVMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMRCRIMDDGIEITSELEKLL 1218
R+ + +P R L T V + AAP ++ D LY RLSALGR+ G +MEW++ RK F+ ++A LDL +K KGI+AAE YF+ L S YG+LLNCYC EK+A++A +F KM + +V SL FNNLMS+ R E V+ L +EMK N+ TYN+ M S++ +NDIEG ERVFE+M++ NG++ N WT+YSNLA Y++ G +EKA+ L+ G + D++ + +C + C +I YL ++ AL ++ A +N+ E + F + YFK+E +V+ AE+ ++K + +D Y L+ETY A+ + MR R+ DG+E++S++E+LL
Sbjct: 6 RQLAAGAPALVRRLSTEV--RAAAAP--------QQEDRLYRRLSALGRNPG--------------------------------------MIMEWIELRKFNFNHCNYATRLDLTAKAKGIAAAEEYFNSLSPSKVVHCVYGSLLNCYCNEKMADRALDIFAKMVEQSMVVKSLPFNNLMSMYCRLGQYEKVLILGEEMKKGNIKPDTCTYNLLMNSHANLNDIEGAERVFEDMKLENGKQCN-WTSYSNLANIYIKVGYQEKAKLALQNVEKEMDSHDREAYHFLISLYAGALGNLGDIVG--MTKCYKEWEAVCSSYNLKLAVAVIRAYLRHDMGEEAETVLEIRPALQHMETATSIAHENKWQPRSETIDKF-LNYFKQESDVSLAEEFYHLMKRVNCVDSRLYESLIETYKASGEAMLNMRARMEADGVELSSDIEQLL 396
HSP 4 Score: 77.411 bits (189), Expect = 1.181e-11
Identity = 66/273 (24.18%), Postives = 132/273 (48.35%), Query Frame = 0
Query: 952 STYGALLNCYCREKLAEKAQTLFEKMDS-MHIVSSLTFNNLMSLCMRRNMPEAVIPLVQEMKNRNLPLGVHTYNIWMTSYSQMNDIEGVERVFEEMQVNNGEEQNSWTAY--SNLAAAYVRAGLKEKAESGLKKNGLIKEAEDVIDNILKRCKGPFYQHCKPLILYYLDKSQVDLALGCLKAALCEVKDNERHQTYEDVKSFVMEYFKKERNVTGAEKCCKILKSLKPLDFEAYRLLLETYVAASKIAPEMRCRIMDDGIEITSELEKLLERV 1221
+TY L N Y + EKA+ + ++ + + +N ++S+ R + V + + +K+ + Y + + +NDI+G++ FEE + + +++ A S + AY+R E+AES V+ ++L + KG F+ C+ + +YL + V A+ + E ++ + + F ++ FK E +V GAE+ +++K + ++ Y++L++ Y A + +R RI DG+E +SELE L+ V
Sbjct: 652 TTYSHLANIYVQAGDHEKARMALKALEKEIGGHERVAYNFMISIYARMGDLDNVHRVWKSLKSGCNVIWNMNYITMIRTLDNLNDIDGLKECFEEWE----KVCSNYDARLPSTVIGAYLRHDRPEEAES-------------VLQSMLGKSKGHFFYACETFVHFYLKRHGVKQAMKIMDKVTSEAVNHGWKPRQDTIDGF-LDCFKLESDVRGAEELYELMKRINCVNDHFYKMLIQIYAGAGQKLGNVRERIERDGVETSSELEDLVASV 906
| Match Name | Stats | Description |
|---|---|---|
| A0A199VK99 | E-Value: 1.414e-154, PID: 40.62 | (Pentatricopeptide repeat-containing protein, mito... [more] |
| A0A1S3YBB6 | E-Value: 2.313e-153, PID: 52.71 | (pentatricopeptide repeat-containing protein At1g0... [more] |
| A0A1J6JN24 | E-Value: 3.757e-151, PID: 52.28 | (Pentatricopeptide repeat-containing protein, mito... [more] |
| A0A7J0H8B5 | E-Value: 1.992e-149, PID: 49.90 | (Tetratricopeptide repeat (TPR)-like superfamily p... [more] |
| A0A5B6YVG8 | E-Value: 2.309e-148, PID: 50.79 | (Uncharacterized protein {ECO:0000313|EMBL:MPA3583... [more] |
| A0A068VBK1 | E-Value: 2.427e-148, PID: 51.12 | (Uncharacterized protein {ECO:0000313|EMBL:CDP1705... [more] |
| A0A6P6VAA6 | E-Value: 4.127e-148, PID: 51.12 | (pentatricopeptide repeat-containing protein At1g0... [more] |
| A0A2R6P5M6 | E-Value: 2.021e-147, PID: 49.51 | (Pentatricopeptide repeat-containing protein {ECO:... [more] |
| M1AI32 | E-Value: 3.378e-146, PID: 51.41 | (Pentatricopeptide repeat-containing protein {ECO:... [more] |
| A0A4D8Y6Y5 | E-Value: 6.833e-146, PID: 33.91 | (Uncharacterized protein {ECO:0000313|EMBL:TEY1479... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |