Resource Type:
Polypeptide
Name:
DCAR_018803
Identifier:
DCAR_018803.mRNA-protein
Sequence:
MKEVEKGLDSQLWHACAGGMVQMPPVNSKIFYFPQGHAEHTLSHVSFGTL
PRIPALILCRVAAIKFMADTETDEVYAAIRLIPIGQNEFDYNENNGVMES
NGIESVEKSNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQ
TVVARDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMR
TENGDLCVGIRRAKRGSLGSPETPTGWTSASGNCPSPYGGFSVYLMEDEN
KRMRSSSNGNGNSSGGIKGKGKVRPESVIEAATLAMKGQPFEVVYYPSAG
TPEFCVRASSLSAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVA
DPILWPNSPWRLLQVTWDEPELLQNVKSVSPWLVELVSNMPVINMSPFSP
PRKKSRLPHYPDFLHDDQFPVSSFTGNPLRPSSPFYYLSDSITAGIQGAR
QAQFGTPLSGLQVSNKVQMGLFPNSTKQLNPQSKISNGTRPSSTHGTETV
SCLLTMGHSNQNLEKTDTKKAPIFILFGQPILTEQQISHDCSRDSVSQVS
HGESPEKRKRPSHDNMDLSEKLTDSRFLWNQGFRKTEPELETGHCKVFLE
SEDVGRTLDLSVLESYEQLHERLANMFRIERSVAMTRVLYQDATGSVKQI
GNEPFSEFRRTAKRLTILMDSGLNTVGRIWNKIMPNADRRLDSSSQTGPL
SIFA*
Sequence Length:
705
Sequence Checksum:
225a734a6f53787f8efc6c94bb9eb913
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_018803, derives from mRNA, DCAR_018803. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_018803 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_018803 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5C9W8 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 1022.69 bits (2643), Expect = 0.000e+0
Identity = 502/709 (70.80%), Postives = 586/709 (82.65%), Query Frame = 0
Match: A0A5J5C9W8 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 1022.69 bits (2643), Expect = 0.000e+0
Identity = 502/709 (70.80%), Postives = 586/709 (82.65%), Query Frame = 0
Query: 1 MKEVEKGLDSQLWHACAGGMVQMPPVNSKIFYFPQGHAEHTLSHVSFGTLPRIPALILCRVAAIKFMADTETDEVYAAIRLIPIGQNEFDYNENNGVMESNGIESVEKSNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVARDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKRGSLGSPETPTGWTSASGNCPSPYGGFSVYLMEDENKRMRSSSNGNGNSSGGIKGKGKVRPESVIEAATLAMKGQPFEVVYYPSAGTPEFCVRASSLSAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPNSPWRLLQVTWDEPELLQNVKSVSPWLVELVSNMPVINMSPFSPPRKKSRLPHYPDFLHDDQFPVSSFTGNPLRPSSPFYYLSDSITAGIQGARQAQFGTPLSGLQVSNKVQMGLFPNSTKQLNPQSKISNGTRPSSTHGTETVSCLLTMGHSNQNLEKTDTKKAPIFILFGQPILTEQQISHDCSRDSVSQVSHGES-----PEKRKRPSHDNMDLSEKLTDSRFLWNQGFRKTEPELETGHCKVFLESEDVGRTLDLSVLESYEQLHERLANMFRIERSVAMTRVLYQDATGSVKQIGNEPFSEFRRTAKRLTILMDSGLNTVGRIWNKIMPNADRRLDSSSQTGPLSIFA 704
MKE EK LDSQLWHACAGGMVQMPPVNSK+FYFPQGHAEH L++V F +LPR+PALILCRVA + FMAD ETDEVYA I L+PIG NE D ++++G + SNG E+ EK SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQT++A+DVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF+R ENGDLC+GIRRAKRG G E+ +GW +A+GNC +PYGGFSV+L EDENK MR+ SNG+ NSSGG++G+G+V PESVIEA +LA GQPFEVVYYP A TPEFC++ASS+ AA RI+W SGMRFKM FETEDSSRISWFMGTI+SVQV DPI WPNSPWRLL VTWDEP+LLQ+VK VSPWLVEL+S++PV+++SPFSPP+KK RLP YPDF D QFPV SF+GNPL PSSP LSD+I AGIQGAR AQFG P S L +NK+++ LFP+S +L+P+ KIS+G P T + +SCLLTMG+SN LEKTD+ KAP F+LFGQPILTEQQISH CS D+VSQV G+ P K ++ + D L E + + F W+QGF TEP ++TGHCKVF+ESEDVGRTLDLSVLESYE+L++RLANMF IERS VLYQD +G+VKQ G+EPF +FR+TAKRLTILMDS N++GR W M NA+ LDSS+QTGPLSI A
Sbjct: 1 MKEAEKSLDSQLWHACAGGMVQMPPVNSKVFYFPQGHAEHALTNVDFSSLPRVPALILCRVATVIFMADPETDEVYAKISLVPIGNNEPD-SDDDGFLGSNGSEAPEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTIIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCLGIRRAKRGVGGGLESSSGWNTAAGNCVTPYGGFSVFLREDENKLMRNGSNGDLNSSGGLRGRGRVGPESVIEAVSLAANGQPFEVVYYPRASTPEFCIKASSVRAATRIKWFSGMRFKMAFETEDSSRISWFMGTIASVQVTDPIHWPNSPWRLLLVTWDEPDLLQSVKRVSPWLVELISSIPVVHLSPFSPPKKKLRLPQYPDFPFDGQFPVPSFSGNPLGPSSPLCCLSDNIPAGIQGARHAQFGIP-SDLHQNNKLRLELFPSSFLRLDPRGKISDGIIPGHTSRNDNISCLLTMGNSNHKLEKTDSVKAPRFLLFGQPILTEQQISHSCSSDNVSQVLTGKHSSDGIPGKTEKSAVDQQGLPENFSSAGFSWHQGFWTTEPVMDTGHCKVFMESEDVGRTLDLSVLESYEELYKRLANMFGIERSEMPCHVLYQDTSGAVKQTGHEPFCDFRKTAKRLTILMDSSSNSIGRKWIMGMRNAENGLDSSNQTGPLSILA 707
BLAST of DCAR_018803 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BMG2 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 1012.29 bits (2616), Expect = 0.000e+0
Identity = 495/708 (69.92%), Postives = 571/708 (80.65%), Query Frame = 0
Match: A0A5J5BMG2 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 1012.29 bits (2616), Expect = 0.000e+0
Identity = 495/708 (69.92%), Postives = 571/708 (80.65%), Query Frame = 0
Query: 1 MKEVEKGLDSQLWHACAGGMVQMPPVNSKIFYFPQGHAEHTLSHVSFGTLPRIPALILCRVAAIKFMADTETDEVYAAIRLIPIGQNEFDYNENNGVMESNGIESVEKSNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVARDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKRGSLGSPETPTGWTSASGNCPSPYGGFSVYLMEDENKRMRSSSNGNGNSSGGIKGKGKVRPESVIEAATLAMKGQPFEVVYYPSAGTPEFCVRASSLSAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPNSPWRLLQVTWDEPELLQNVKSVSPWLVELVSNMPVINMSPFSPPRKKSRLPHYPDFLHDDQFPVSSFTGNPLRPSSPFYYLSDSITAGIQGARQAQFGTPLSGLQVSNKVQMGLFPNSTKQLNPQSKISNGTRPSSTHGTETVSCLLTMGHSNQNLEKTDTKKAPIFILFGQPILTEQQISHDCSRDSVSQVSHGESPE-----KRKRPSHDNMDLSEKLTDSRFLWNQGFRKTEPELETGHCKVFLESEDVGRTLDLSVLESYEQLHERLANMFRIERSVAMTRVLYQDATGSVKQIGNEPFSEFRRTAKRLTILMDSGLNTVGRIWNKIMPNADRRLDSSSQTGPLSIF 703
M+E EK LDSQLWHACAGGMVQMPPVNSK+FYFPQGHAEH L+ V F PR+PALILCR+AA+KFMAD ETDEVYA IRL+PIG NE DY+++ G + S G E+ EK + FAKTLTQSDANNGGGFSVPRYCAET+FPRLDY+ADPPVQTV +DVHG IWKFRHIYRGTPRRHLLTTGWS FVNQKKLVAGDSIV +R ENGDLCVGIRRAKRG++G E+P+ W SA+GNC S GGFSV L EDENK MR SNGN NSS G++G+G+V PESVIEA +LA GQPFEVVYYP A TPEFC++ASS+ AAMR +W SGMRFKM FETEDSSRISWFMGT++SVQVA+PI WPNSPWRLLQVTWDEP+LLQNVK VSPWLVELVS+MPVI++SPFSPPRKK RL +PDF D QFP+ SF+GNPL PSSP LSD+I+AGIQGAR AQFG PLS L ++NK+Q+GLFP+S +QLNP++KISNG P T + +SCLLTMG S+ LE TD KAP F+LFGQPILTEQQIS CS D+VSQV G+ K ++ + D DL E L + FLW++GF +EP L TGHCKVF+ESEDVG TL+LSVL SYE+L+ RLA MF IERS VLYQDA G+VKQ G+EPFS+F +TAKRLTILMDSG N++GR W + NA DS Q PLS+F
Sbjct: 1 MEEAEKTLDSQLWHACAGGMVQMPPVNSKVFYFPQGHAEHALADVDFAASPRVPALILCRIAAVKFMADPETDEVYAKIRLVPIG-NETDYDDD-GALRSKGPEAPEKPDFFAKTLTQSDANNGGGFSVPRYCAETVFPRLDYSADPPVQTVNMKDVHGVIWKFRHIYRGTPRRHLLTTGWSAFVNQKKLVAGDSIVLLRAENGDLCVGIRRAKRGAVGGLESPSRWNSAAGNCVSLCGGFSVSLREDENKLMRCGSNGNLNSSVGLRGRGRVGPESVIEAVSLAANGQPFEVVYYPRASTPEFCIKASSVRAAMRTRWYSGMRFKMAFETEDSSRISWFMGTVASVQVANPIRWPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSMPVIHLSPFSPPRKKLRLLQHPDFPLDGQFPMPSFSGNPLGPSSPLCCLSDNISAGIQGARHAQFGIPLSDLHLNNKLQLGLFPSSFQQLNPRAKISNGIIPGHTSRNDNISCLLTMGRSDHKLETTDRVKAPQFLLFGQPILTEQQISRSCSSDAVSQVITGKCSSDKILGKAEKTALDQKDLPENLPGAGFLWDRGF-ISEPGLGTGHCKVFVESEDVGWTLNLSVLGSYEELYRRLATMFGIERSQMACHVLYQDANGAVKQTGDEPFSDFMKTAKRLTILMDSGSNSIGRKWITGLQNAGNEQDSLKQRSPLSLF 705
BLAST of DCAR_018803 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7ZKL2 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 990.334 bits (2559), Expect = 0.000e+0
Identity = 488/723 (67.50%), Postives = 572/723 (79.11%), Query Frame = 0
Match: A0A1U7ZKL2 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 990.334 bits (2559), Expect = 0.000e+0
Identity = 488/723 (67.50%), Postives = 572/723 (79.11%), Query Frame = 0
Query: 1 MKEVEKGLDSQLWHACAGGMVQMPPVNSKIFYFPQGHAEHTLSHVSFGTLPRIPALILCRVAAIKFMADTETDEVYAAIRLIPIGQNEFDYNENNGVMESNGIESVEKSNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVARDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKRGSLGSPETPTGWTSASGNCPSPYGGFSVYLMEDENKRMRSSSNGNGNSSGGIKGKGKVRPESVIEAATLAMKGQPFEVVYYPSAGTPEFCVRASSLSAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPNSPWRLLQVTWDEPELLQNVKSVSPWLVELVSNMPVINMSPFSPPRKKSRLPHYPDFLHDDQFPVSSFTGNPLRPSSPFYYLSDSITAGIQGARQAQFGTPLSGLQVSNKVQMGLFPNSTKQLN---PQSKISNGTRPSSTHGTETVSCLLTMGHSNQNLEKTDTKKAPIFILFGQPILTEQQISHDCSRDSVSQVSHGESPEKRKRPSHDNMDLSEKLTDSR----------------FLWNQGFRKTEPELETGHCKVFLESEDVGRTLDLSVLESYEQLHERLANMFRIERSVAMTRVLYQDATGSVKQIGNEPFSEFRRTAKRLTILMDSGLNTVGRIWNKIMPNADRRLDSSSQTGPLSIFA 704
MKE EK LDSQLWHACAGGMVQMP +NSK+FYFPQG AEH +V FG PRIP LILCRVAA+K++AD ETDEVYA IRL+P+ NE DY+++ GV+ SNG + EK SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTV+A+DVHGE+WKFRHIYRGTPRRHLLTTGWSTFVNQKKL+AGDSIVF+R ENG+LCVGIRRAKRG G PE+ +GW A+GNC SPYGGFSV+L EDENK MR+ + GN NS G++ +G+VR ESVIEAATLA GQ FEVVYYP A TPEFCV+AS++ AAMRIQWC GMRFKM FETEDSSRISWFMGTISSVQVADPI WPNSPWRLLQVTWDEP+LLQNVK VSPWLVELVSNMP I++SPFSPPRKK RLP +PDF D QF + SF+GNPL PSSP LSD+ AGIQGAR AQFG LS L + NK+Q GLFP S ++L+ P SKI+NG + +G+E +SCLLT+G S Q+ K+D +K+P F+LFGQPILTEQQIS CS ++VS V G S + +N D + +D F W + TE LETGHCKVF+ESEDVGRTLDL+VL SYE+L+ RLANMF IERS ++RVLYQDATG+VK G+EPFSEF +TA+RLTILMDSG + +GR+W + +A+ L+++++TGPLSIFA
Sbjct: 12 MKETEKCLDSQLWHACAGGMVQMPSINSKVFYFPQGQAEHAHGNVDFGNSPRIPPLILCRVAAVKYLADPETDEVYAKIRLVPLRNNEPDYDDD-GVLGSNGSDVAEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRAENGELCVGIRRAKRGVGGGPESLSGWNPAAGNCVSPYGGFSVFLREDENKLMRNVNGGNSNSGVGLRTRGRVRAESVIEAATLAANGQSFEVVYYPRASTPEFCVKASAVKAAMRIQWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSNMPAIHLSPFSPPRKKFRLPQHPDFPLDSQFQIPSFSGNPLGPSSPLCCLSDNTPAGIQGARHAQFGISLSDLHL-NKLQSGLFPASFQRLDNTTPPSKINNGLIRGNPNGSENISCLLTIGSSTQSSRKSDGRKSPGFLLFGQPILTEQQISLSCSGETVSPVLTGNSSSE-----GNNQDKATNFSDGSGSALNQLGPLDNSCEGFPWYKERPTTEIGLETGHCKVFMESEDVGRTLDLTVLGSYEELYRRLANMFGIERSEMLSRVLYQDATGAVKHTGDEPFSEFMKTARRLTILMDSGSDNIGRVWMTGLRSAENGLNATNKTGPLSIFA 727
BLAST of DCAR_018803 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438DTG8 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 988.408 bits (2554), Expect = 0.000e+0
Identity = 492/725 (67.86%), Postives = 571/725 (78.76%), Query Frame = 0
Match: A0A438DTG8 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 988.408 bits (2554), Expect = 0.000e+0
Identity = 492/725 (67.86%), Postives = 571/725 (78.76%), Query Frame = 0
Query: 1 MKEVEKGLDSQLWHACAGGMVQMPPVNSKIFYFPQGHAEHTLSHVSFGTLPRIPALILCRVAAIKFMADTETDEVYAAIRLIPIGQNEFDYNENNGVMESNGIESVEKSNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVARDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKRGSLGSPETPTGWTSASGNCPSPYGGFSVYLMEDENKRMRSSSNGNGN--SSGGIKGKGKVRPESVIEAATLAMKGQPFEVVYYPSAGTPEFCVRASSLSAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPNSPWRLLQVTWDEPELLQNVKSVSPWLVELVSNMPVINMSPFSPPRKKSRLPHYPDFLHDDQFPVSSFTGNPLRPSSPFYYLSDSITAGIQGARQAQFGTPLSGLQVSNKVQMGLFPNSTKQLNPQSKISNGTRPSSTHGTETVSCLLTMGHSNQNLEKTDTKKAPIFILFGQPILTEQQISHDCSRDSVSQV-------------------SHGESPEKRKRPSHDNMDLSEKLTDSRFLWNQGFRKTEPELETGHCKVFLESEDVGRTLDLSVLESYEQLHERLANMFRIERSVAMTRVLYQDATGSVKQIGNEPFSEFRRTAKRLTILMDSGLNTVGRIWNKIMPNADRRLDSSSQTGPLSIFA 704
MKE EK LDSQLWHACAGGMVQMP V+SK+FYFPQGHAEH ++V F PRIPAL+LCRVAA+KFMAD ETDEVYA IRL+PI NE D E++GVM S+G E+ EK SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTV+A+DVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF+R ENGDLCVGIRRAKRG G PE+P+GW AS PY GF +L EDE+K MR+ GN N S G++G +VRPESV+EAATLA GQPFEVVYYP A TPEFCV+AS + +A+RIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPI WPNSPWRLLQVTWDEP+LLQNVK VSPWLVELVSNMP+I++SPFSPPRKK R+P +PDF D QFP+SSF+ NPL SSP L D+ AGIQGAR AQ+G LS L ++NK+Q GLFP S ++ + S+I+NG + E++SCLLTMG+S+QNLEK+ +K P F+LFGQPILTEQQ+S CS D+VSQV G + E++ +P E L++ F W+QGF+ TE L+TGHCKVF+ESEDVGR+LDLSVL SYE+L+ RLANMF IERS + VLY+DATG+VK G+EPFS+F + AKRLTILMDSG N +GR W M NA+ LDSS++TGPLSIFA
Sbjct: 108 MKETEKSLDSQLWHACAGGMVQMPSVSSKVFYFPQGHAEHAHTNVDFAAAPRIPALVLCRVAAVKFMADPETDEVYAKIRLVPIANNELDC-EDDGVMGSSGSEAPEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPAS-----PYAGFPKFLREDESKLMRNGVGGNSNPGSGSGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTPEFCVKASGVRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPIIHLSPFSPPRKKLRIPQHPDFPFDGQFPMSSFSSNPLGSSSPLCCLPDNTPAGIQGARHAQYGISLSDLHLNNKLQSGLFPTSFQRFDQHSRITNGIITAHRKNNESISCLLTMGNSSQNLEKSANEKTPQFLLFGQPILTEQQMSRTCSSDAVSQVLTGKSSSDGSSDKAKKISDGLGSTLEQKGKP--------ENLSNVGFSWHQGFQTTEIGLDTGHCKVFMESEDVGRSLDLSVLGSYEELYTRLANMFGIERSETFSHVLYRDATGAVKHTGDEPFSDFTKKAKRLTILMDSGSNNIGRTWITGMRNAENGLDSSNKTGPLSIFA 818
BLAST of DCAR_018803 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2N9HWN2 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 987.638 bits (2552), Expect = 0.000e+0
Identity = 488/722 (67.59%), Postives = 566/722 (78.39%), Query Frame = 0
Match: A0A2N9HWN2 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 987.638 bits (2552), Expect = 0.000e+0
Identity = 488/722 (67.59%), Postives = 566/722 (78.39%), Query Frame = 0
Query: 1 MKEVEKGLDSQLWHACAGGMVQMPPVNSKIFYFPQGHAEHTLSHVSFGTLPRIPALILCRVAAIKFMADTETDEVYAAIRLIPIGQN-EFDYNENNGVMESNGIESVEKSNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVARDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKRGSLGSPETPTGWTSASGNCPSPYGGFSVYLMEDENKRMRSSSNGNGNSSGGIKGKGKVRPESVIEAATLAMKGQPFEVVYYPSAGTPEFCVRASSLSAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPNSPWRLLQVTWDEPELLQNVKSVSPWLVELVSNMPVINMSPFSPPRKKSRLPHYPDFLHDDQFPVSSFTGNPLRPSSPFYYLSDSITAGIQGARQAQFGTPLSGLQVSNKVQMGLFPNSTKQLNPQSKISNGTRPSSTHGTETVSCLLTMGHSNQNLEKTDTKKAPIFILFGQPILTEQQISHDCSRDSVSQVSHGESPEKRKRPSHDNMDLSEKLTD-----------------SRFLWNQGFRKTEPELETGHCKVFLESEDVGRTLDLSVLESYEQLHERLANMFRIERSVAMTRVLYQDATGSVKQIGNEPFSEFRRTAKRLTILMDSGLNTVGRIWNKIMPNADRRLDSSSQTGPLSIFA 704
MKE EK LDSQLWHACAGGMVQMP VNSK+FYFPQGH EH HV F LPRIPALI C+V A+KF+AD ETDEV++ IRL+P+G + E ++E+ GV+ +NG E+ EK SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTV+A+DVHGE+WKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF+R ENGDLCVGIRRAKRG G+PE+P+GW + GN S Y GFS++L E ENK MRS + GKGKVRPESV EAA LA GQPFEVVYYP A TPEFCV+AS++ AAMR QWCSGMRFKMPFETEDSSRISWFMGTI+ VQVADP+ WPNSPWRLLQVTWDEP+LLQNVK VSPWLVELVSNMPVI++SPFSPPRKK RLP +PDF HD QFP+ SF GN L PSSP LSD+ AGIQGAR AQFG L L +NK+Q GLFP++++Q N + NG +T+ E +SCLLT+G+S+QNLEK+D K F+LFGQPILTEQQIS CS D+V QV G+S S+ N D + L+D + F W+QGF+ TE L+TGHCKVF+ESEDVGRTLDLSVL SYE+L+ RLANMF IERS ++RVLYQDATG+VKQ G+EPFS+F++TAKRLTIL S N++GR W + NA+ LD+S++TGPLSIFA
Sbjct: 1 MKEAEKSLDSQLWHACAGGMVQMPTVNSKVFYFPQGHVEHAQVHVDFSGLPRIPALIPCKVGAVKFLADPETDEVFSKIRLVPLGNSSELGFDED-GVLGANGSENPEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGAPESPSGWNPSPGNSVSCYSGFSMFLREQENKVMRSGGGNSSPGGN-FSGKGKVRPESVTEAAALAASGQPFEVVYYPRASTPEFCVKASAVKAAMRTQWCSGMRFKMPFETEDSSRISWFMGTIACVQVADPLRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHISPFSPPRKKLRLPQHPDFPHDGQFPLPSFLGNTLGPSSPLCCLSDNTPAGIQGARHAQFGISLPDLHFNNKLQPGLFPSNSQQYNMHPRTCNGMMKGNTNSNENLSCLLTIGNSSQNLEKSDNVKTHQFLLFGQPILTEQQISRSCSSDTVPQVLTGKS------SSNGNQDKVKFLSDGSGSKLEQQVSPEKSSSTGFSWHQGFQNTELALDTGHCKVFMESEDVGRTLDLSVLGSYEELYRRLANMFGIERSDMLSRVLYQDATGAVKQTGDEPFSDFKKTAKRLTILTGSSGNSIGRTWITGIRNAENGLDASNKTGPLSIFA 714
BLAST of DCAR_018803 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2KN74 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 985.712 bits (2547), Expect = 0.000e+0
Identity = 484/718 (67.41%), Postives = 563/718 (78.41%), Query Frame = 0
Match: A0A7N2KN74 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 985.712 bits (2547), Expect = 0.000e+0
Identity = 484/718 (67.41%), Postives = 563/718 (78.41%), Query Frame = 0
Query: 1 MKEVEKGLDSQLWHACAGGMVQMPPVNSKIFYFPQGHAEHTLSHVSFGTLPRIPALILCRVAAIKFMADTETDEVYAAIRLIPIGQ---NEFDYNENNGVMESNGIESVEKSNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVARDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKRGSLGSPETPTGWTSASGNCPSPYGGFSVYLMEDENKRMRSSSNGNGNSSGGIKGKGKVRPESVIEAATLAMKGQPFEVVYYPSAGTPEFCVRASSLSAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPNSPWRLLQVTWDEPELLQNVKSVSPWLVELVSNMPVINMSPFSPPRKKSRLPHYPDFLHDDQFPVSSFTGNPLRPSSPFYYLSDSITAGIQGARQAQFGTPLSGLQVSNKVQMGLFPNSTKQLNPQSKISNGTRPSSTHGTETVSCLLTMGHSNQNLEKTDTKKAPIFILFGQPILTEQQISHDCSRDSVSQVSHGESPEKRKR-----------PSHDNMDLSEKLTDSRFLWNQGFRKTEPELETGHCKVFLESEDVGRTLDLSVLESYEQLHERLANMFRIERSVAMTRVLYQDATGSVKQIGNEPFSEFRRTAKRLTILMDSGLNTVGRIWNKIMPNADRRLDSSSQTGPLSIFA 704
MKE EK LD QLWHACAGGMVQMP VNSK+FYFPQGHAEH HV F +LPRIPALI CRV +KF+AD ETDEV++ IRL+P+G E D+ E++GV+ +NG E+ EK SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTV+A+DVHGE+WKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF+R ENGDLCVGIRRAKRG G+ E+P+GW GN S YGGFS++L E ENK MR+SS GN + GKGKVRPESVIEAA LA GQPFEV YYP A TPEFCV+AS++ A MR QWCSGMRFKM FETEDSSRISWFMGTI+SVQVADP+ WPNSPWRLLQVTWDEP+LLQNVK VSPWLVE+VSNMPVI++SPFSPPRKK R P +PDF HD QF + SF+GNPL SSP +LSD+ AGIQGAR AQFG LS L +NK+Q GL P++ ++ N + SN S+T+ E +SCLLT+G+S+QNLEK+D+ K F+LFGQPI+TEQQIS CS D+VSQV G+S + + D EK + + F W+QGF+ TE L+TGHCKVF+ESEDVGRTLDLSVL SYE+LH RLANMF IERS + V+Y+DATG+VKQ G+EPFS+F +TAKRLTI S N +GR W M NA+ LD+S++TGPLSIFA
Sbjct: 1 MKEAEKSLDPQLWHACAGGMVQMPQVNSKVFYFPQGHAEHAQVHVDFSSLPRIPALIPCRVGDVKFLADPETDEVFSKIRLVPLGNRNIGELDF-EDDGVVGANGSENPEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGALESPSGWNPGPGNSVSSYGGFSMFLREQENKVMRNSSPAGGN----LSGKGKVRPESVIEAAALAASGQPFEVAYYPRASTPEFCVKASAVKATMRTQWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPLRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVEVVSNMPVIHISPFSPPRKKFRFPQHPDFSHDGQFSMPSFSGNPLGSSSPLCFLSDNTPAGIQGARHAQFGISLSDLHFNNKLQPGLCPSNFQRYNMNPRTSNSIMTSNTNSNENLSCLLTIGNSSQNLEKSDSVKRHQFLLFGQPIITEQQISRSCSSDTVSQVLTGKSSSDENQDKVKFLSDGSGSTLDQQVSPEKSSSTGFSWHQGFQTTELGLDTGHCKVFMESEDVGRTLDLSVLGSYEELHRRLANMFGIERSDMLNHVVYRDATGAVKQTGDEPFSDFMKTAKRLTIFNVSSSNNIGRTWITGMRNAENGLDASNKTGPLSIFA 713
BLAST of DCAR_018803 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7FVD0 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 984.556 bits (2544), Expect = 0.000e+0
Identity = 488/681 (71.66%), Postives = 560/681 (82.23%), Query Frame = 0
Match: A0A7J7FVD0 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 984.556 bits (2544), Expect = 0.000e+0
Identity = 488/681 (71.66%), Postives = 560/681 (82.23%), Query Frame = 0
Query: 1 MKEVE-KGLDSQLWHACAGGMVQMPPVNSKIFYFPQGHAEHTLSHVSFGTLPRIPALILCRVAAIKFMADTETDEVYAAIRLIPIGQNEFDYNENNGVMESNGIESVEKSNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVARDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMR-TENGDLCVGIRRAKRGSLGSPETPTGWTSASGNCPSPYGGFSVYLMEDENKRMRSSSNGNGNSSGGIKGKGKVRPESVIEAATLAMKGQPFEVVYYPSAGTPEFCVRASSLSAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPNSPWRLLQVTWDEPELLQNVKSVSPWLVELVSNMPVINMSPFSPPRKKSRLPHYPDFLHDDQFPVSSFTGNPLRPSSPFYYLSDSITAGIQGARQAQFGTPLSGLQVSNKVQMGLFPNSTKQLNPQSKISNGTRPSSTHGTETVSCLLTMGHSNQNLEKTDTKKAPIFILFGQPILTEQQISHDCSRDSVSQVSHGESPEKRKRPSHDNMDLSEKLTDSRFLWNQGFRKTEPELETGHCKVFLESEDVGRTLDLSVLESYEQLHERLANMFRIERSVAMTRVLYQDATGSVKQIGNEPFSEFRRTAKRLTILMDSGLNTVGRI 679
MKEVE K LDSQLWHACAGGMVQMP VNSK+FYFPQGHAEH L+ V FG LPR+PALILCRV A+KFMAD ETDEVYA IRLIP+ NE DY+++ GV+ SNG ES EK SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTV+A+DVHGEIWKFRHIYRGTPRRHLLTTGWS+FVNQKKLVAGDSIVF+R ENGDLCVGIRRAKRG G PE+P+GW S SGNC S YG FSV++ EDENK MR+ SNGN NS GG +G+G+VRPE+V+EAATLA GQ FEV+YYP A TPEFC++ASS+ A+MRIQWCSGMRFKMPFETEDSSRISWFMGT++SVQVADPI WPNSPWRLLQVTWDEP+LL NVK VSPWLVELVSNMPVI+MSPFSPPRKK R P +PDF D QF + SF+ NPL PSSP LSD+I AGIQGAR +QFG PLS L + NK+Q+ LFP+S +QL+P K+SNG + + + VSCLLTMG SN +KTD K P F+LFGQPILTEQQI+ CS D+VS+V + PEK++R + D + E L+ F W QGF TE L+TGHCKVF+ESE VGR LDLSV+ SYE+L++R+ANMF IERS VLYQDATG+VK G+EPFS+F +TAKRLTIL+DSG N GR+
Sbjct: 1 MKEVEEKSLDSQLWHACAGGMVQMPLVNSKVFYFPQGHAEHALTTVHFGALPRLPALILCRVTAVKFMADAETDEVYAKIRLIPMRSNELDYDDD-GVLGSNGSESPEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRGAENGDLCVGIRRAKRGITGGPESPSGWNSGSGNCVSSYGSFSVFMREDENKLMRNGSNGNLNSGGGFRGRGRVRPEAVVEAATLAANGQAFEVLYYPRASTPEFCIKASSVRASMRIQWCSGMRFKMPFETEDSSRISWFMGTVASVQVADPIRWPNSPWRLLQVTWDEPDLLHNVKHVSPWLVELVSNMPVIHMSPFSPPRKKLRFPQHPDFPLDGQFSMPSFSHNPLGPSSPLCCLSDNIPAGIQGARHSQFGIPLSDLYLHNKLQLDLFPSSLQQLDPHGKLSNGLVSTHKNSNDNVSCLLTMGISNSKSDKTDNLKTPQFVLFGQPILTEQQIACSCSGDAVSKVVN--FPEKKERSAVDQQWVPENLSCVAFPWRQGFHMTELGLDTGHCKVFMESEYVGRNLDLSVIGSYEELYKRVANMFGIERSETPCHVLYQDATGNVKHTGDEPFSDFMKTAKRLTILLDSG-NNFGRL 677
BLAST of DCAR_018803 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4ED25 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 983.4 bits (2541), Expect = 0.000e+0
Identity = 486/676 (71.89%), Postives = 558/676 (82.54%), Query Frame = 0
Match: A0A4S4ED25 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 983.4 bits (2541), Expect = 0.000e+0
Identity = 486/676 (71.89%), Postives = 558/676 (82.54%), Query Frame = 0
Query: 1 MKEVE-KGLDSQLWHACAGGMVQMPPVNSKIFYFPQGHAEHTLSHVSFGTLPRIPALILCRVAAIKFMADTETDEVYAAIRLIPIGQNEFDYNENNGVMESNGIESVEKSNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVARDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMR-TENGDLCVGIRRAKRGSLGSPETPTGWTSASGNCPSPYGGFSVYLMEDENKRMRSSSNGNGNSSGGIKGKGKVRPESVIEAATLAMKGQPFEVVYYPSAGTPEFCVRASSLSAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPNSPWRLLQVTWDEPELLQNVKSVSPWLVELVSNMPVINMSPFSPPRKKSRLPHYPDFLHDDQFPVSSFTGNPLRPSSPFYYLSDSITAGIQGARQAQFGTPLSGLQVSNKVQMGLFPNSTKQLNPQSKISNGTRPSSTHGTETVSCLLTMGHSNQNLEKTDTKKAPIFILFGQPILTEQQISHDCSRDSVSQVSHGESPEKRKRPSHDNMDLSEKLTDSRFLWNQGFRKTEPELETGHCKVFLESEDVGRTLDLSVLESYEQLHERLANMFRIERSVAMTRVLYQDATGSVKQIGNEPFSEFRRTAKRLTILMDSGLN 674
MKEVE K LDSQLWHACAGGMVQMP VNSK+FYFPQGHAEH L+ V FG LPR+PALILCRV A+KFMAD ETDEVYA IRLIP+ NE DY+++ GV+ SNG ES EK SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTV+A+DVHGEIWKFRHIYRGTPRRHLLTTGWS+FVNQKKLVAGDSIVF+R ENGDLCVGIRRAKRG G PE+P+GW S SGNC S YG FSV++ EDENK MR+ SNGN NS GG +G+G+VRPE+V+EAATLA GQ FEVVYYP A TPEFC++ASS+ A+MRIQWCSGMRFKMPFETEDSSRISWFMGT++SVQVADPI WPNSPWRLLQVTWDEP+LL NVK VSPWLVELVSNMPVI+MSPFSPPRKK R P +PDF D QF + SF+ NPL PSSP LSD+I AGIQGAR +QFG PLS L + NK+Q+ LFP+S +QL+P K+S+G + + + VSCLLTMG+SN +KTD K P F+LFGQPILTEQQI+ CS D+VS+V + PEK++R + D + E L+ F W QGF TE L+TGHCKVF+ESE VGR LDLSV+ SYE+L++R+ANMF IERS VLYQDATG+VK G+EPFS+F +TAKRLTIL+DSG N
Sbjct: 1 MKEVEEKSLDSQLWHACAGGMVQMPLVNSKVFYFPQGHAEHALTTVHFGALPRLPALILCRVTAVKFMADAETDEVYAKIRLIPMRSNELDYDDD-GVLGSNGSESPEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRGAENGDLCVGIRRAKRGITGGPESPSGWNSGSGNCVSSYGSFSVFMREDENKLMRNGSNGNLNSGGGFRGRGRVRPEAVVEAATLAANGQAFEVVYYPRASTPEFCIKASSVRASMRIQWCSGMRFKMPFETEDSSRISWFMGTVASVQVADPIRWPNSPWRLLQVTWDEPDLLHNVKHVSPWLVELVSNMPVIHMSPFSPPRKKLRFPQHPDFPLDGQFSMPSFSRNPLGPSSPLCCLSDNIPAGIQGARHSQFGIPLSDLYLHNKLQLDLFPSSLQQLDPHGKLSDGLVSTHKNSNDNVSCLLTMGNSNSKSDKTDNLKTPQFVLFGQPILTEQQIACSCSGDAVSKVVN--FPEKKERSAFDQQWVPENLSCVAFPWRQGFHMTELGLDTGHCKVFMESEYVGRNLDLSVIGSYEELYKRVANMFGIERSETPCHVLYQDATGNVKHTGDEPFSDFMKTAKRLTILLDSGNN 673
BLAST of DCAR_018803 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6GU14 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 979.934 bits (2532), Expect = 0.000e+0
Identity = 492/725 (67.86%), Postives = 571/725 (78.76%), Query Frame = 0
Match: F6GU14 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 979.934 bits (2532), Expect = 0.000e+0
Identity = 492/725 (67.86%), Postives = 571/725 (78.76%), Query Frame = 0
Query: 1 MKEVEKGLDSQLWHACAGGMVQMPPVNSKIFYFPQGHAEHTLSHVSFGTLPRIPALILCRVAAIKFMADTETDEVYAAIRLIPIGQNEFDYNENNGVMESNGIESVEKSNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVARDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKRGSLGSPETPTGWTSASGNCPSPYGGFSVYLMEDENKRMRSS--SNGNGNSSGGIKGKGKVRPESVIEAATLAMKGQPFEVVYYPSAGTPEFCVRASSLSAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPNSPWRLLQVTWDEPELLQNVKSVSPWLVELVSNMPVINMSPFSPPRKKSRLPHYPDFLHDDQFPVSSFTGNPLRPSSPFYYLSDSITAGIQGARQAQFGTPLSGLQVSNKVQMGLFPNSTKQLNPQSKISNGTRPSSTHGTETVSCLLTMGHSNQNLEKTDTKKAPIFILFGQPILTEQQISHDCSRDSVSQV-------------------SHGESPEKRKRPSHDNMDLSEKLTDSRFLWNQGFRKTEPELETGHCKVFLESEDVGRTLDLSVLESYEQLHERLANMFRIERSVAMTRVLYQDATGSVKQIGNEPFSEFRRTAKRLTILMDSGLNTVGRIWNKIMPNADRRLDSSSQTGPLSIFA 704
MKE EK LDSQLWHACAGGMVQMP V+SK+FYFPQGHAEH ++V F PRIPAL+LCRVAA+KFMAD ETDEVYA IRL+PI NE D E++GVM S+G E+ EK SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTV+A+DVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF+R ENGDLCVGIRRAKRG G PE+P+GW AS PY GF +L EDE+K MR+ N N S GG++G +VRPESV+EAATLA GQPFEVVYYP A TPEFCV+AS + +A+RIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPI WPNSPWRLLQVTWDEP+LLQNVK VSPWLVELVSNMP+I++SPFSPPRKK R+P +PDF D QFP+SSF+ NPL SSP L D+ AGIQGAR AQ+G LS L ++NK+Q GLFP S ++ + S+I+NG + E++SCLLTMG+S+QNLEK+ +K P F+LFGQPILTEQQ+S CS D+VSQV G + E++ +P E L++ F W+QGF+ TE L+TGHCKVF+ESEDVGR+LDLSVL SYE+L+ RLANMF IERS + VLY+DATG+VK G+EPFS+F + AKRLTILMDSG N +GR W M NA+ LDSS++TGPLSIFA
Sbjct: 1 MKETEKSLDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEHAHTNVDFAAAPRIPALVLCRVAAVKFMADPETDEVYAKIRLVPIANNELDC-EDDGVMGSSGSEAPEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPAS-----PYAGFPKFLREDESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTPEFCVKASGVRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPIIHLSPFSPPRKKLRIPQHPDFPFDGQFPMSSFSSNPLGSSSPLCCLPDNTPAGIQGARHAQYGISLSDLHLNNKLQSGLFPTSFQRFDQHSRITNGIITAHRKNNESISCLLTMGNSSQNLEKSANEKTPQFLLFGQPILTEQQMSRTCSSDAVSQVLTGKSSSDGSSDKAKKISDGLGSTLEQKGKP--------ENLSNVGFSWHQGFQTTEIGLDTGHCKVFMESEDVGRSLDLSVLGSYEELYTRLANMFGIERSETFSHVLYRDATGAVKHTGDEPFSDFTKKAKRLTILMDSGSNNIGRTWITGMRNAENGLDSSNKTGPLSIFA 711
BLAST of DCAR_018803 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068UFQ3 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 967.992 bits (2501), Expect = 0.000e+0
Identity = 480/714 (67.23%), Postives = 564/714 (78.99%), Query Frame = 0
Match: A0A068UFQ3 (Auxin response factor {ECO:0000256|RuleBase:RU004561})
HSP 1 Score: 967.992 bits (2501), Expect = 0.000e+0
Identity = 480/714 (67.23%), Postives = 564/714 (78.99%), Query Frame = 0
Query: 1 MKE-VEKGLDSQLWHACAGGMVQMPPVNSKIFYFPQGHAEHTLSHVSFGTLPRIPALILCRVAAIKFMADTETDEVYAAIRLIPIGQNEFDYNENNGVMESNGIESVEKSNSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVARDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKRGSLGSPETPTGWTSASGNCPSPYGGFSVYLMEDENKRMRSSSNGN----GNSSGGIKGKGKVRPESVIEAATLAMKGQPFEVVYYPSAGTPEFCVRASSLSAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPNSPWRLLQVTWDEPELLQNVKSVSPWLVELVSNMPVINMSPFSPPRKKSRLPHYPDFLHDDQFPVSSFTGNPLRPSSPFYYLSDSITAGIQGARQAQFGTPLSGLQVSNKVQMGLFPNSTKQLNPQSKISNGTRPSSTHGTETVSCLLTMGHSNQNLEKTDTKKAPIFILFGQPILTEQQISHDCSRDSVSQVSHGESPEKRKRPSHDNMDLSEK-----LTDSRFLWNQGFRKTEPELETGHCKVFLESEDVGRTLDLSVLESYEQLHERLANMFRIERSVAMTRVLYQDATGSVKQIGNEPFSEFRRTAKRLTILMDSGLNTVGRIWNKIMPNADRRLDSSSQTGPLSIFA 704
MKE VEK LDSQLWHACAGGMVQMP VNS+++YFPQGHAEHTL++V F +PR+P LILCRVAA+KF+AD ETDEVYA IRL+PIG NE Y + + +K SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA+DVHGE WKFRHIYRGTPRRHLLTTGWSTFVNQKKL+AGDSIVF+R E+GDLCVGIRRAKRG +G PE+P+GW SA+GN YGGFS++L EDENK MR+ S GN GN G +KG+G+VR ESVIEAA+ A+KGQPF+VVYYP A TPEF V+ASS+S+AMR+QWC+GMRFKMPFETEDSSRISWFMGTI++VQ ADPI WPNSPWRLLQVTWDEP+LLQNVK VSPWLVELVSNMPVI++SPFSP RKK RL + DF D QFP+ SF+GNPL PSSP LSD+I AGIQGAR AQ G L+ L +SNK+ +GL S +QL+P +K S+G ++ +SCLLTMG+S+Q LEKT + K P F+LFGQPILTEQQ+SH + D+VSQV G+S +++ L +K L ++ WNQG E L+TGHCKVFLESEDVGRTLDLSVL SYE+L+++L +MF IERS V Y+DATG++KQ G+E FSEF RTAKRLTI + G N+VGR W +P A+R LDSS+Q GPLSIFA
Sbjct: 1 MKEMVEKSLDSQLWHACAGGMVQMPVVNSRVYYFPQGHAEHTLANVDFAGMPRVPPLILCRVAAVKFLADPETDEVYARIRLVPIGNNEGCYEFD---------DDADKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRAESGDLCVGIRRAKRGGIGGPESPSGWNSAAGN----YGGFSMFLREDENKLMRTGSAGNLNSPGNGGGALKGRGRVRAESVIEAASFAVKGQPFDVVYYPRASTPEFFVKASSVSSAMRVQWCAGMRFKMPFETEDSSRISWFMGTIAAVQFADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLLQHSDFSLDGQFPMPSFSGNPLGPSSPLCCLSDNIPAGIQGARHAQLGVQLADLHLSNKMHLGLISPSFQQLDPLAKSSDGITRGHLDSSDDISCLLTMGNSSQKLEKTTSVKTPRFLLFGQPILTEQQMSHGYNSDAVSQV--GKSSACGISLKAEDVSLDQKVHLGSLPNTGLFWNQGCHAAELGLDTGHCKVFLESEDVGRTLDLSVLGSYEELYKKLTSMFMIERSELEGHVFYRDATGALKQTGDESFSEFVRTAKRLTIFKNPG-NSVGRKWLTGLPTAERGLDSSNQAGPLSIFA 698
| Match Name | Stats | Description |
|---|---|---|
| A0A5J5C9W8 | E-Value: 0.000e+0, PID: 70.80 | Auxin response factor {ECO:0000256|RuleBase:RU0045... [more] |
| A0A5J5BMG2 | E-Value: 0.000e+0, PID: 69.92 | Auxin response factor {ECO:0000256|RuleBase:RU0045... [more] |
| A0A1U7ZKL2 | E-Value: 0.000e+0, PID: 67.50 | Auxin response factor {ECO:0000256|RuleBase:RU0045... [more] |
| A0A438DTG8 | E-Value: 0.000e+0, PID: 67.86 | Auxin response factor {ECO:0000256|RuleBase:RU0045... [more] |
| A0A2N9HWN2 | E-Value: 0.000e+0, PID: 67.59 | Auxin response factor {ECO:0000256|RuleBase:RU0045... [more] |
| A0A7N2KN74 | E-Value: 0.000e+0, PID: 67.41 | Auxin response factor {ECO:0000256|RuleBase:RU0045... [more] |
| A0A7J7FVD0 | E-Value: 0.000e+0, PID: 71.66 | Auxin response factor {ECO:0000256|RuleBase:RU0045... [more] |
| A0A4S4ED25 | E-Value: 0.000e+0, PID: 71.89 | Auxin response factor {ECO:0000256|RuleBase:RU0045... [more] |
| F6GU14 | E-Value: 0.000e+0, PID: 67.86 | Auxin response factor {ECO:0000256|RuleBase:RU0045... [more] |
| A0A068UFQ3 | E-Value: 0.000e+0, PID: 67.23 | Auxin response factor {ECO:0000256|RuleBase:RU0045... [more] |
Pages
back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |