DCAR_021783

Resource Type: 
Polypeptide
Name: 
DCAR_021783
Identifier: 
DCAR_021783.mRNA-protein
Sequence: 
MVEEQSQHAEPARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLA
LVGAKVSHIESLDYDYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGI
PEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGAC
LASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVG
GVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQG
GLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLI
NEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQEACPTTGRVG
NFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFAL
YCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVL
GAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPS
IYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIV
DVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFL
QERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTT
AYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRA
HNILSAFPHLEKAKGSKKGQ*
Sequence Length: 
721
Sequence Checksum: 
0dc15132aabbdf9baae4f9403a72c2ad
View location in JBrowse: 
DCARv2_Chr6:19808606..19813486+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, DCAR_021783, derives from mRNA, DCAR_021783.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of DCAR_021783 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
[Close]
BLAST of DCAR_021783 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4F0X9 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1209.13 bits (3127), Expect = 0.000e+0
Identity = 590/721 (81.83%), Postives = 657/721 (91.12%), Query Frame = 0
 
Query:    1 MVEEQSQHAEPARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYDYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQE-ACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 720
            M E+ +Q A+    Y    Q +E + +PE+NSLH+PL+KR  TLSS+PLA+VGAKVSHIESLDY+YL GFI+FT  NF+LT+VA+ LCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTL+VKI+GSIGAVSAGLDLGKEGPLVHIG+C+ASLLGQGGPDNYR++W WLRYFNNDRDRRDLITCG+SSGVCAAF++PVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR SME+C + +CGLFGQGGLI+FDVS V++RY+V+DIIPVTV+GVIGGVLGSLYNYLLHK+LR+YNLINEKGK++KLLLSLTVSLFTSACLYGLPFLASCTPCD S  E ACPTTGR GNFKQFNCP+G+YNDLATLL TTNDDAVR+IFSTNTP EF  FSL IFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGR+LGIAM  YT IDQGLY+VLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLI+KTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVG+LAD KPPVVTL GIEKVGRIVD+L+NTTHNGFPVVD+   PVG  A+G  +LHG++LR HLVL LKKKWFLQE+RRTEEWEV EK TSVDLAER   +EEV VTK+EM+M +DLHPL N T YTV+E+MSVAKALVLFR+VGLRH+LI+P++Q +G SPVVGILTRQDLRAHNILSAFPHL K+KG +KG 
Sbjct:    1 MEEDLNQSAKETTTYNMEAQENEVENDPESNSLHQPLIKRKQTLSSTPLAMVGAKVSHIESLDYEYLMGFIFFTGVNFILTMVAAVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIKWCWLRYFNNDRDRRDLITCGASSGVCAAFKAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRASMEFCNSGNCGLFGQGGLIMFDVSGVTVRYNVMDIIPVTVIGVIGGVLGSLYNYLLHKVLRLYNLINEKGKIYKLLLSLTVSLFTSACLYGLPFLASCTPCDSSNPEYACPTTGRAGNFKQFNCPTGYYNDLATLLLTTNDDAVRNIFSTNTPKEFHIFSLIIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRILGIAMESYTNIDQGLYSVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLIAKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGDLADAKPPVVTLNGIEKVGRIVDLLKNTTHNGFPVVDEEPPPVGF-AIGATKLHGIILRGHLVLALKKKWFLQEKRRTEEWEVCEKFTSVDLAERQGNIEEVTVTKDEMDMNIDLHPLANRTPYTVMESMSVAKALVLFRQVGLRHLLIVPEYQAAGASPVVGILTRQDLRAHNILSAFPHLAKSKGREKGN 720
[Close]
BLAST of DCAR_021783 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834ZCX7 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8399937.1}))

HSP 1 Score: 1187.17 bits (3070), Expect = 0.000e+0
Identity = 583/722 (80.75%), Postives = 659/722 (91.27%), Query Frame = 0
 
Query:    1 MVEEQSQHAEP-ARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYDYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQE-ACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 720
            M E+ SQHAE  A + MEG+ + EE+ +PE+NSL +PLLKR+ TLSS+PLA+VGAKVSHIESLDY+YL GFIY T +N +LTLVAS LCV FAPTAAGPGIPEIKAYLNGVDTPNMFGATTL+VKIVGSI AVSAGLDLGKEGPLVHIG+C+ASLLGQGGPDNYRL+WRWLRYFNNDRDRRDLITCG++SGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR  +EYC +  CGLFG+GGLI+FDVS V++ YH +DI+PV ++GVIGGVLGSLYNYLLHK+LR+Y+LINEKG++HK++LSLTVS+FTS CLY LPFL SC+PCDPSL + ACPTTG+ GNFKQFNCP+G+YNDLA+LLH T+DDAVR+IFST+TPTEF   SL IFF+LY ILGLFTFGIAVPSGLFLPIILMGSAYGR+LG+AMG YT+IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITM+VLLI+KTVGD FNPSIYEIILDLKGLPFLDA+PEPWMRN+TV +LAD KP VVTL G+EKV RIV+VLRNTTHNGFPVVD+  VP    A+G  ELHGL+LRAHLV +LKKKWFL ERRRTEEWEVRE+ TSV+LAER  K+EEVAVTK+EMEMYVDLHPLTNTT YTVVE+MSVAKA+VLFR+VGLRH+LI+PK+Q +GVSPVVGILTRQDLRAHNILSAFPHL K+K S+KG+
Sbjct:    1 MEEDLSQHAESTATHNMEGEASKEER-DPESNSLDQPLLKRSNTLSSNPLAIVGAKVSHIESLDYEYLKGFIYLTGSNLVLTLVASILCVGFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKIVGSIAAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRLKWRWLRYFNNDRDRRDLITCGAASGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEYCDSGKCGLFGRGGLIMFDVSSVTVSYHAMDIVPVAIIGVIGGVLGSLYNYLLHKVLRLYSLINEKGRIHKVVLSLTVSIFTSVCLYFLPFLVSCSPCDPSLPDSACPTTGQTGNFKQFNCPNGYYNDLASLLHATSDDAVRNIFSTSTPTEFHPLSLVIFFSLYWILGLFTFGIAVPSGLFLPIILMGSAYGRLLGLAMGTYTQIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILDLKGLPFLDANPEPWMRNLTVSDLADAKPGVVTLCGVEKVARIVEVLRNTTHNGFPVVDEGVVPPMGLAIGATELHGLILRAHLVAVLKKKWFLMERRRTEEWEVREQFTSVELAERGGKIEEVAVTKDEMEMYVDLHPLTNTTPYTVVESMSVAKAMVLFRQVGLRHLLIVPKYQAAGVSPVVGILTRQDLRAHNILSAFPHLAKSKESEKGK 721
[Close]
BLAST of DCAR_021783 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A103XLD9 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1181.78 bits (3056), Expect = 0.000e+0
Identity = 588/721 (81.55%), Postives = 649/721 (90.01%), Query Frame = 0
 
Query:    1 MVEEQSQHAEPARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYDYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQEA-CPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 720
            M ++  Q AE   N ME QQ ++++ +PE+NSLHRPLLKRNLTLSSSPLALVG KVS+IESLDY+Y+ GF + T  NF+LTL A+ L V  APTAAGPGIPEIKAYLNGVDTPNM+GA  + VKI+GSIGAV+AGLDLGKEGPLVHIGAC+ASLLGQGGPDNYR+RWR +RYFNNDRDRRD+ITCG+SSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR  MEYCK   CGLFGQGGLI+FDVS VS+RYHVVD+IPVTV+G+IGGVLGSLYN+LLHK+LR+YNLIN+KGK  K++LSL VSLFTSACLYGLPFLASCTPCDPSL ++ CP+TGR+GNFKQFNCP GHYNDLATLL TTNDDAVR+IFSTNTP+E++ FSL IFF LYCILGLFTFGIAVPSGLFLPIIL+GSAYGR+LG+AMG YT IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISK+VGDCFNPSIYEIILDLKGLPFL+AHPEPWMRNITVGELADVKPPVVTL GIEKV  IVDVLRNT+HN F VVD++ VP   Q     E+HGLVLRAHL+L+LKKKWFLQERRRTEEWEVREK T VD+AER   +E+VAVTK EMEMYVDLHPLTNTT YTVVETMSVAKALV FR+VGLRHMLILPK+ G  V PVVGILTRQDLRAHNILSAFPHLE++  SKKG+
Sbjct:    1 MEKDSDQLAETTCN-ME-QQTNQQERDPESNSLHRPLLKRNLTLSSSPLALVGTKVSYIESLDYEYMMGFFFMTGVNFMLTLGATLLVVFLAPTAAGPGIPEIKAYLNGVDTPNMYGAMPMFVKIIGSIGAVAAGLDLGKEGPLVHIGACIASLLGQGGPDNYRIRWRCIRYFNNDRDRRDIITCGASSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFMEYCKAGDCGLFGQGGLIMFDVSGVSVRYHVVDLIPVTVIGIIGGVLGSLYNHLLHKVLRLYNLINDKGKFAKIMLSLAVSLFTSACLYGLPFLASCTPCDPSLVDSECPSTGRMGNFKQFNCPKGHYNDLATLLLTTNDDAVRNIFSTNTPSEYRVFSLVIFFLLYCILGLFTFGIAVPSGLFLPIILIGSAYGRLLGMAMGPYTTIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKSVGDCFNPSIYEIILDLKGLPFLEAHPEPWMRNITVGELADVKPPVVTLCGIEKVSNIVDVLRNTSHNAFAVVDNQVVPAVGQV---SEVHGLVLRAHLLLVLKKKWFLQERRRTEEWEVREKFTWVDVAERWGTIEDVAVTKEEMEMYVDLHPLTNTTPYTVVETMSVAKALVQFRQVGLRHMLILPKYHGPTVPPVVGILTRQDLRAHNILSAFPHLERSHASKKGR 716
[Close]
BLAST of DCAR_021783 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2H5QAW1 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1147.88 bits (2968), Expect = 0.000e+0
Identity = 566/717 (78.94%), Postives = 641/717 (89.40%), Query Frame = 0
 
Query:    2 VEEQSQHAEPARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYDYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQEACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKK 718
            +EE S     AR      +ADEE+ +PE+NSL +PLLKR+ TLSSSPLALVGAKVSHIESLDY+YL GF+YFT  NFLLTLVA+ LCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTL+VKI+GSIGAV+AGLDLGKEGPLVHIG+C+ASLLGQGGPDN+R++W+WLRYFNNDRDRRDLITCGSSSGVCAAFR+PVGGVLF+LEEVATWWRSALLWRTFFSTA+VVVVLR  +E C +  CGLFG GGLI+FDVS+V +RYHV+DIIPVT++G+IGG+LG LYN++LHK+LR+YNLIN+KGK+HKLLL+L+VS+FTS C Y LPFL  C  CDPS  E CPT GR GNFKQFNCP+GHYNDLATLL TTNDDAVR+IFS+NTPTEFQ  S+ IFF LYCILGL TFGIAVPSGLFLPIILMGSAYGR+LG+AMG YT IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITM+VLLI+KTVGD FNPSIYEIIL+LKGLPFLDAHPEPWMR +TVGEL D KPPV+TL GIEKV +IVDVLRNTTHNGFPV+D+  VP    A    ELHGL+LRAHLVL LKKKWFLQE+RRTEEWEVREK + V+LAER  K+EEVAVT  EMEMY+DLHPLTNTT YTV+E+MSVAKA+VLFR+VGLRH+L++PK++ +GVSPVVGILTRQDLRA NIL+AFPHLE++K  +K
Sbjct:    1 MEENSNPV--ARATQAHMEADEEERDPESNSLQQPLLKRSRTLSSSPLALVGAKVSHIESLDYEYLQGFLYFTGVNFLLTLVAAVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWQWLRYFNNDRDRRDLITCGSSSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAIVVVVLRAFIEICNSGKCGLFGTGGLIMFDVSNVPVRYHVMDIIPVTLIGIIGGILGGLYNHILHKVLRLYNLINQKGKMHKLLLALSVSVFTSVCQYCLPFLVDCKACDPSFPETCPTNGRSGNFKQFNCPNGHYNDLATLLLTTNDDAVRNIFSSNTPTEFQPSSILIFFILYCILGLITFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILELKGLPFLDAHPEPWMRTLTVGELVDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNILTAFPHLERSKSGQK 715
[Close]
BLAST of DCAR_021783 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A835HLG9 ((Uncharacterized protein {ECO:0000313|EMBL:KAF9603020.1}))

HSP 1 Score: 1143.64 bits (2957), Expect = 0.000e+0
Identity = 560/702 (79.77%), Postives = 627/702 (89.32%), Query Frame = 0
 
Query:   14 NYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYDYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQEA-CPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAK 714
            +YMEG++A  E+ +PE+NSL +PLLKRN TLSS+PLA+VG+KVSH+ESLDY+YL GFIYFT AN +L+LVA+ LCV FAPTAAGPGIPEIKAYLNGVDTPNMFGA  L+VKI+GSI AVSAGLDLGKEGPLVHIG+C+ASLLGQGGPD +RL+WRWLRYFNNDRDRRDLITCG++SGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR  MEYC   SCGLFG+GGLI+FDVS V++ +H  D++P+ V+GVIGGVLGSLYNYLLHK+LR+YNLINEKG+++K+LLSL VSLFTS CLY LPFL SC+PC+PSL ++ CPTTGR GNFKQFNCPSG+YNDLA+LLH+ NDDAVR+IFS +TPTEFQ  SL I+F LYCILGLFTFGIAVPSGLFLPIILMGSAYGR+LG+ MG YTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITM VLLI+KTVGD FNPSIYEIIL LKGLPFLDAHPEPWMRN+TVGELAD K  VVTL G+EKV RIV+VLRNT HNGFPVVD   VP      G  ELHGL+LR HLV  L +KWF+ E RRTEEWEVR+K TSVDLAER  K+EEV VTK+EMEM+VDLHPLTNTT YTVVE+MSVAKALVLFREVGLRH+LI+PK+Q + V PVVGILTRQDLRAHNIL+AFPHL K K
Sbjct:   52 HYMEGEEA--EENDPESNSLQQPLLKRNRTLSSNPLAMVGSKVSHMESLDYEYLMGFIYFTVANLVLSLVAAVLCVMFAPTAAGPGIPEIKAYLNGVDTPNMFGAPQLVVKIIGSICAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDKHRLKWRWLRYFNNDRDRRDLITCGAASGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFMEYCNTGSCGLFGKGGLIMFDVSGVTVTHHATDLVPIAVIGVIGGVLGSLYNYLLHKVLRLYNLINEKGRVYKILLSLIVSLFTSVCLYCLPFLVSCSPCNPSLPDSTCPTTGRTGNFKQFNCPSGYYNDLASLLHSANDDAVRNIFSISTPTEFQPISLIIYFVLYCILGLFTFGIAVPSGLFLPIILMGSAYGRLLGLFMGTYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMFVLLIAKTVGDSFNPSIYEIILHLKGLPFLDAHPEPWMRNLTVGELADAKSAVVTLCGVEKVARIVEVLRNTKHNGFPVVDKGIVPRVRLPDGATELHGLILRTHLVTALSQKWFITEMRRTEEWEVRQKFTSVDLAERVGKIEEVEVTKDEMEMFVDLHPLTNTTPYTVVESMSVAKALVLFREVGLRHLLIVPKYQAAEVCPVVGILTRQDLRAHNILNAFPHLAKTK 751
[Close]
BLAST of DCAR_021783 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RK16 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1138.25 bits (2943), Expect = 0.000e+0
Identity = 557/668 (83.38%), Postives = 609/668 (91.17%), Query Frame = 0
 
Query:   54 AKVSHIESLDYDYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQE-ACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 720
            A V +IE     YL GFI+    NF LTL+A+ LCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTL+VKIVGSIGAVSAGLDLGKEGPLVHIG+C+ASLLGQGGPDNYR++WRWLRYFNNDRDRRD+ITCG+SSGVCAAFR+PVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR  MEYCK+ +CGLFGQGGLI+FDVS V++ YHV+DIIP+ V+GVIGGVLGSLYN+ LHK+LR+YNLINEKGK++KLLLSLTVSLFTSACLYGLPFLA C PCD SL E ACP TGR GNFKQFNCP G+YNDLATLL TTNDDAVR+IFSTNT +EF  FSLTIFF LYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMG YT IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLI+KTVGDCFNPSIYEIILDLKGLPFL+A+PEPWMRNITVGELADVK PVVTL G+EKVGRIVDVL+NTTHNGFP+VD+   P    A G  ELHG++LRAHLVL L+KKWFLQE+RRTEEWEVREK TSVDLAER  K+EEVAVTK+EMEMY+DLH LTN T YTV+E+MSVAKALVLFR+VGLRHMLI+P++Q +GVSPVVGILTRQDLRA NIL+AFPHLEK+KG +KG 
Sbjct:  122 AVVGYIEK--ERYLMGFIFLAGVNFFLTLIAAVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKIVGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIKWRWLRYFNNDRDRRDIITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFMEYCKSGNCGLFGQGGLIMFDVSGVTVSYHVMDIIPIAVIGVIGGVLGSLYNHFLHKVLRLYNLINEKGKIYKLLLSLTVSLFTSACLYGLPFLARCRPCDSSLSESACPNTGRAGNFKQFNCPDGYYNDLATLLLTTNDDAVRNIFSTNTSSEFHVFSLTIFFVLYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLIAKTVGDCFNPSIYEIILDLKGLPFLEANPEPWMRNITVGELADVKAPVVTLNGVEKVGRIVDVLKNTTHNGFPIVDEGVTPPVRLATGVIELHGIILRAHLVLALQKKWFLQEKRRTEEWEVREKFTSVDLAEREGKIEEVAVTKDEMEMYIDLHSLTNRTPYTVMESMSVAKALVLFRQVGLRHMLIVPQYQAAGVSPVVGILTRQDLRAQNILTAFPHLEKSKGREKGN 787

HSP 2 Score: 77.7962 bits (190), Expect = 4.113e-12
Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 0
 
Query:    1 MVEEQSQHAEPARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYD 65
            M ++    A+    Y    QA+EE+ +PE+NSLH+PLLKRN TLSS+PLA+VG+KVSHIESLDY+
Sbjct:    1 MEDDLRNTAKATTTYNMEAQANEER-DPESNSLHQPLLKRNRTLSSTPLAMVGSKVSHIESLDYE 64
[Close]
BLAST of DCAR_021783 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J6HRI1 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1135.17 bits (2935), Expect = 0.000e+0
Identity = 561/712 (78.79%), Postives = 629/712 (88.34%), Query Frame = 0
 
Query:   10 EPARNYMEGQ-QADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYDYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQEA-CPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREV-PVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKK 718
            + +R Y E   + D E    E N L + LLKRN TLSS+PLA+VG KVSHIESLDY+Y  G +YFT ANF LT+VA+ LCV FAPTAAGPGIPEIKAYLNGVDTPNMFGAT L+VKI+GSIGAVSAGLDLGKEGPLVHIG+C+ASLLGQGGPDNYR+RWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR  +E C N  CGLFG+GGLI+FDVS+V + YH +DIIPV ++GVIGG+LG+LYN++LHK+LR+YNLIN+KGK+HKLLLSL VSLFTS CLYGLPFLASCTPCD SL E+ CPT GR GN+KQFNCP G+YNDLATLL TTNDDAVR+IFSTN+  E+   SL IFF LYC+LGL TFGIAVPSGLFLPIILMGSAYGR+LG+AMG +T IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITM+VLLISKTVGD FN SIYEIIL+LKGLPFLDA+PEPWMRN+TVGELAD KPPVVTL GIEKV R+V+VLRNTTHNGFPV+DD  + PVGS  +   ELHG++LR HLV +LKKKWFL E+R+TE+WEVREK TSVDLAER  K+EEV VT++EMEMY+DLHPLTNTT YTVVE+MSVAKA+VLFR VGLRHMLI+PK+Q +GV PVVGILTRQDLRAHNIL AFPHL ++K  +K
Sbjct:    3 QDSRLYGESTTEGDLEARESETNPLCQTLLKRNRTLSSNPLAIVGTKVSHIESLDYEYFMGLLYFTAANFFLTMVAAVLCVWFAPTAAGPGIPEIKAYLNGVDTPNMFGATQLIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEICNNGQCGLFGRGGLIMFDVSNVPVTYHAMDIIPVVLIGVIGGLLGALYNHVLHKVLRLYNLINQKGKIHKLLLSLGVSLFTSVCLYGLPFLASCTPCDASLAESVCPTNGRSGNYKQFNCPKGYYNDLATLLLTTNDDAVRNIFSTNSAGEYNAISLLIFFVLYCVLGLITFGIAVPSGLFLPIILMGSAYGRLLGMAMGSHTSIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLISKTVGDSFNLSIYEIILELKGLPFLDANPEPWMRNLTVGELADAKPPVVTLNGIEKVSRVVEVLRNTTHNGFPVLDDGVLRPVGS-GIEVTELHGVILRTHLVQVLKKKWFLTEKRKTEDWEVREKFTSVDLAEREGKIEEVTVTRDEMEMYIDLHPLTNTTPYTVVESMSVAKAMVLFRSVGLRHMLIVPKYQATGVPPVVGILTRQDLRAHNILFAFPHLARSKSREK 713
[Close]
BLAST of DCAR_021783 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6S7N4J5 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1125.15 bits (2909), Expect = 0.000e+0
Identity = 557/668 (83.38%), Postives = 606/668 (90.72%), Query Frame = 0
 
Query:   54 AKVSHIESLDYDYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQEA-CPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 720
            A V +I+  +  Y+ GF Y T  NFLLTLVA+ LCV FAPTAAGPGIPEIKAYLNGVDTPNM+GATT+ VKIVGSIGAV+AGLDLGKEGPLVHIGAC+ASLLGQGGPD+YR++WRW+RYFNNDRDRRD+ITCG+SSGVCAAFR+PVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR  MEYCK+ +CGLFGQGGLI+FDVS V +RYHV D+IPVTV+G+IGGVLGSLYNYLLHK+LR+YNLIN KGKL K+ LSL VSLFTSACLYGLPFLASCTPCDPSL ++ CP+TGR+GNFKQFNCP GHYNDLATLL TTNDDAVR+IFSTNTP+E++ FSL IFF LYCILGLFTFGIAVPSGLFLPIILMGSAYGR+LG+AMG Y  IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISK+VGDCFNPSIYEIIL+LKGLPFL+AHPEPWMRNITVGELADVKPPVVTL GIE VGRIVDVLRNTTHNGF VVD     VG  +    E+HGLVLRAHL+L+LKKKWFLQERRRTEEWEVREK T VD+AER   +EEVAVTK EMEMYVDLHPLTNTT YTVVETMSVAKALV FR+VGLRHML+LPK+ G GV PVVGILTRQDLRAHNILSAFPHLEK+  SKKG 
Sbjct:  115 AVVQYID--NKRYMMGFFYMTGVNFLLTLVATVLCVFFAPTAAGPGIPEIKAYLNGVDTPNMYGATTMFVKIVGSIGAVAAGLDLGKEGPLVHIGACIASLLGQGGPDDYRIKWRWIRYFNNDRDRRDIITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFMEYCKDGACGLFGQGGLIMFDVSGVPVRYHVADLIPVTVIGIIGGVLGSLYNYLLHKVLRLYNLINAKGKLAKISLSLAVSLFTSACLYGLPFLASCTPCDPSLVDSECPSTGRMGNFKQFNCPKGHYNDLATLLLTTNDDAVRNIFSTNTPSEYRVFSLVIFFILYCILGLFTFGIAVPSGLFLPIILMGSAYGRLLGMAMGPYASIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKSVGDCFNPSIYEIILELKGLPFLEAHPEPWMRNITVGELADVKPPVVTLSGIETVGRIVDVLRNTTHNGFAVVDS----VGQVS----EVHGLVLRAHLLLVLKKKWFLQERRRTEEWEVREKFTWVDVAERWGTIEEVAVTKEEMEMYVDLHPLTNTTPYTVVETMSVAKALVQFRQVGLRHMLVLPKYHGHGVPPVVGILTRQDLRAHNILSAFPHLEKSHASKKGS 772

HSP 2 Score: 66.2402 bits (160), Expect = 1.730e-8
Identity = 32/49 (65.31%), Postives = 43/49 (87.76%), Query Frame = 0
 
Query:   18 GQQADEEQGNPENNSLHRPLLKRNLT-LSSSPLALVGAKVSHIESLDYD 65
             +  ++++ + E++SLH+PLLKRNLT LSSSPLALVGAKVS+IESLDY+
Sbjct:    9 AETTNQQERDMESDSLHQPLLKRNLTALSSSPLALVGAKVSYIESLDYE 57
[Close]
BLAST of DCAR_021783 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2J6MDV2 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1123.23 bits (2904), Expect = 0.000e+0
Identity = 554/668 (82.93%), Postives = 607/668 (90.87%), Query Frame = 0
 
Query:   54 AKVSHIESLDYDYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQEA-CPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 720
            A V +I+  +  Y+ GF+Y T  NF+LTL+A+ LCV FAPTAAGPGIPEIKAYLNGVDTPNM+GATT+ VKIVGSIGAV+AGLDLGKEGPLVHIGAC+ASLLGQGGPD+YR++WRW+RYFNNDRDRRD+ITCG+SSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR  MEYCK+ +CGLFGQGGLI+FDV  V +RYHV D+IPVTV+G+IGGVLGSLYNYLLHK+LR+YNLIN KGKL K+ LSL VSLFTSACLYGLPFLASCTPCDPS+ ++ CP+TGR+GNFKQFNCP GHYNDLATLL TTNDDAVR+IFSTNTP+E++ FSL IFF LYCILGLFTFGIAVPSGLFLPIILMGSAYGR+LG+AMG Y  IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISK+VGDCFNPSIYEIIL+LKGLPFL+AHPEPWMRNITVGELADVKPPVVTL GIE VGRIVDVLRNTTHNGF VVD     VG  +    E+HGLVLRAHL+L+LKKKWFLQERRRTEEWEVREK T VD+AER   +EEVAVTK EMEMYVDLHPLTNTT YTVVETMSVAKALV FR+VGLRHML+LPK+ G GV PVVGILTRQDLRAHNILSAFPHLEK+  SKKG+
Sbjct:  115 AVVQYID--NKRYMMGFLYMTGVNFILTLIATVLCVFFAPTAAGPGIPEIKAYLNGVDTPNMYGATTMFVKIVGSIGAVAAGLDLGKEGPLVHIGACIASLLGQGGPDDYRIKWRWIRYFNNDRDRRDIITCGASSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFMEYCKDGACGLFGQGGLIMFDVGGVPVRYHVADLIPVTVIGIIGGVLGSLYNYLLHKVLRLYNLINAKGKLAKISLSLAVSLFTSACLYGLPFLASCTPCDPSVVDSECPSTGRMGNFKQFNCPKGHYNDLATLLLTTNDDAVRNIFSTNTPSEYRVFSLVIFFILYCILGLFTFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYASIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKSVGDCFNPSIYEIILELKGLPFLEAHPEPWMRNITVGELADVKPPVVTLSGIETVGRIVDVLRNTTHNGFAVVDS----VGQVS----EVHGLVLRAHLLLVLKKKWFLQERRRTEEWEVREKFTWVDVAERWGTIEEVAVTKEEMEMYVDLHPLTNTTPYTVVETMSVAKALVQFRQVGLRHMLVLPKYHGHGVPPVVGILTRQDLRAHNILSAFPHLEKSHASKKGR 772

HSP 2 Score: 67.781 bits (164), Expect = 5.245e-9
Identity = 33/49 (67.35%), Postives = 43/49 (87.76%), Query Frame = 0
 
Query:   18 GQQADEEQGNPENNSLHRPLLKRNLT-LSSSPLALVGAKVSHIESLDYD 65
             +  ++++ + E+NSLH+PLLKRNLT LSSSPLALVGAKVS+IESLDY+
Sbjct:    9 AETTNQQERDMESNSLHQPLLKRNLTALSSSPLALVGAKVSYIESLDYE 57
[Close]
BLAST of DCAR_021783 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7IAZ6 (Chloride channel protein {ECO:0000256|RuleBase:RU361221})

HSP 1 Score: 1121.3 bits (2899), Expect = 0.000e+0
Identity = 564/721 (78.22%), Postives = 629/721 (87.24%), Query Frame = 0
 
Query:    1 MVEEQSQHAEPARNYMEGQQADEEQGNPENNSLHRPLLKRNLTLSSSPLALVGAKVSHIESLDYDYLAGFIYFTTANFLLTLVASALCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGLDLGKEGPLVHIGACLASLLGQGGPDNYRLRWRWLRYFNNDRDRRDLITCGSSSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRLSMEYCKNASCGLFGQGGLILFDVSDVSLRYHVVDIIPVTVLGVIGGVLGSLYNYLLHKILRVYNLINEKGKLHKLLLSLTVSLFTSACLYGLPFLASCTPCDPSLQE-ACPTTGRVGNFKQFNCPSGHYNDLATLLHTTNDDAVRHIFSTNTPTEFQYFSLTIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRMLGIAMGDYTKIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMLVLLISKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADVKPPVVTLRGIEKVGRIVDVLRNTTHNGFPVVDDREVPVGSQALGERELHGLVLRAHLVLLLKKKWFLQERRRTEEWEVREKITSVDLAERSVKLEEVAVTKNEMEMYVDLHPLTNTTAYTVVETMSVAKALVLFREVGLRHMLILPKFQGSGVSPVVGILTRQDLRAHNILSAFPHLEKAKGSKKGQ 720
            M E+ +Q A+    Y    Q +E + +PE+NSLH+PL+KR  TLSS+PLA+VGAKVSHIESLDY+           N L      +     +   AGPGIPEIKAYLNGVDTPNMFGATTL+VKI+GSIGAVSAGLDLGKEGPLVHIG+C+ASLLGQGGPDNYR++W WLRYFNNDRDRRDLITC     +  +F++PVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLR SME+C + +CGLFGQGGLI+FDVS V++RY+V+DIIPVTV+GVIGGVLGSLYNYLLHK+LR+YNLINEKGK++KLLLSLTVSLFTSACLYGLPFLASCTPCD S  E ACPTTGR GNFKQFNCP+G+YNDLATLL TTNDDAVR+IFSTNTP EF  FSL IFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGR+LGIAM  YT IDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITM+VLLI+KTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELAD KPPVVTL GIEKVGRIVD+L+NTTHNGFPVVD+   PVG  A+G  +LHG++LR HLVL LKKKWFLQE+RRTEEWEV EK TSVDLAER   +EEVAVTK+EM+M +DLHPL N T YTV+E+MSVAKALVLFR+VGLRH+LI+P++Q +G SPVVGILTRQDLRAHNILSAFPHL K+KG +KG 
Sbjct:    1 MEEDLNQSAKETTTYNMEAQENEVENDPESNSLHQPLIKRKQTLSSTPLAMVGAKVSHIESLDYE--------INENDLFKHDWRSR----SKVQAGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYRIKWCWLRYFNNDRDRRDLITCWC---LFRSFKAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRASMEFCNSGNCGLFGQGGLIMFDVSGVTVRYNVMDIIPVTVIGVIGGVLGSLYNYLLHKVLRLYNLINEKGKIYKLLLSLTVSLFTSACLYGLPFLASCTPCDSSNPEYACPTTGRAGNFKQFNCPTGYYNDLATLLLTTNDDAVRNIFSTNTPKEFHIFSLIIFFALYCILGLFTFGIAVPSGLFLPIILMGSAYGRILGIAMESYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDCFNPSIYEIILDLKGLPFLDAHPEPWMRNITVGELADAKPPVVTLNGIEKVGRIVDLLKNTTHNGFPVVDEGPPPVGF-AIGATKLHGIILRGHLVLALKKKWFLQEKRRTEEWEVCEKFTSVDLAERQGNIEEVAVTKDEMDMNIDLHPLANRTPYTVMESMSVAKALVLFRQVGLRHLLIVPEYQAAGASPVVGILTRQDLRAHNILSAFPHLAKSKGREKGN 705
Match NameStatsDescription
A0A4S4F0X9E-Value: 0.000e+0, PID: 81.83Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A834ZCX7E-Value: 0.000e+0, PID: 80.75(Uncharacterized protein {ECO:0000313|EMBL:KAF8399... [more]
A0A103XLD9E-Value: 0.000e+0, PID: 81.55Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A2H5QAW1E-Value: 0.000e+0, PID: 78.94Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A835HLG9E-Value: 0.000e+0, PID: 79.77(Uncharacterized protein {ECO:0000313|EMBL:KAF9603... [more]
A0A2R6RK16E-Value: 4.113e-12, PID: 83.38Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A7J6HRI1E-Value: 0.000e+0, PID: 78.79Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A6S7N4J5E-Value: 1.730e-8, PID: 83.38Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A2J6MDV2E-Value: 5.245e-9, PID: 82.93Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]
A0A7J7IAZ6E-Value: 0.000e+0, PID: 78.22Chloride channel protein {ECO:0000256|RuleBase:RU3... [more]

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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
DCAR peptide blastp to SwissProt and TrEMBL without DCAR

This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions.
DCAR V1.0 Gene Prediction

For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins.

Data from this analysis can be viewed in JBrowse here.