Resource Type:
Polypeptide
Name:
DCAR_021320
Identifier:
DCAR_021320.mRNA-protein
Sequence:
MGKKKSDESGANAKAKTNSKDAPKDAKKISVSAMLASMDQKPDKTKKASS
SSTAGKSKPKAAPKVSSYVDGLDLPPSDEEDDDIASEEEIETSDANKQTV
RHQKTEEKPLQISVTEKELKKREKKEMITAQAAEYAKKVALKDDRDAFTV
VIGSRAAVLEGQDDADANVKDITIENFSVSARGKELLKNTSVKISHGQRY
GLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAVDAVVS
ANEELIQIREEVATLMKSSSAAGDDEDADGTASLDAAEKLTELYEKLQIM
GSDAAEAQAAKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTL
LLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLH
DLKLHLYRGNFDDFETGYEQRRKEANKKFENHEKQVKAAKRTGSRVAQEK
VKNRAKLTAAKEASKNKSKGKVDDDEPLPDAPRKWRDYTVEFHFPEPTEL
TPPLMQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLN
LLAGDLVPSEGEMRRSQKLRVGRYSQHFVDLLTMEETPVQYLLRLHPDQE
GFSKQEAVRAKLGKYGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHIL
LLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCGDEEKSEI
WVVENGTVEKFPGTFDEYKEELQQEIRAEVDD*
Sequence Length:
733
Sequence Checksum:
22561fe2edd10cba0fa5e189698f488e
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_021320, derives from mRNA, DCAR_021320. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_021320 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_021320 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A067LJM7 ((Uncharacterized protein {ECO:0000313|EMBL:KDP44499.1}))
HSP 1 Score: 1238.4 bits (3203), Expect = 0.000e+0
Identity = 606/732 (82.79%), Postives = 673/732 (91.94%), Query Frame = 0
Match: A0A067LJM7 ((Uncharacterized protein {ECO:0000313|EMBL:KDP44499.1}))
HSP 1 Score: 1238.4 bits (3203), Expect = 0.000e+0
Identity = 606/732 (82.79%), Postives = 673/732 (91.94%), Query Frame = 0
Query: 1 MGKKKSDESGANAKAKTNSKDAPKDAKKISVSAMLASMDQKPDKTKKASSSSTAGKSKPKAAPKVSSYVDGLDLPPSDEEDDDIASEEEIETSDANKQTVRHQKTEEKPLQISVTEKELKKREKKEMITAQAAEYAKKVALKDDRDAFTVVIGSRAAVLEGQDDADANVKDITIENFSVSARGKELLKNTSVKISHGQRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAVDAVVSANEELIQIREEVATLMKSSSAAGDDEDADGTASLDAAEKLTELYEKLQIMGSDAAEAQAAKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFETGYEQRRKEANKKFENHEKQVKAAKRTGSRVAQEKVKNRAKLTAAKEASKNKSKGKVDDDEPLPDAPRKWRDYTVEFHFPEPTELTPPLMQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEMRRSQKLRVGRYSQHFVDLLTMEETPVQYLLRLHPDQEGFSKQEAVRAKLGKYGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCGDEEKSEIWVVENGTVEKFPGTFDEYKEELQQEIRAEVDD 732
MGKKK++E G AKAKT++KD K+ KISV+AMLA MDQKPDK KK S+S + K+K APKV+SY DG+DLPPSD EDD + +E+ + S+ +Q+ R Q+ + KPL+ISVT+KELKKREKK+++ A AE AKK ALKDD DAFTVVIGSRA+VLEG+D+ADANVKDITI+NFSV+ARGKELLKN SVKISHG+RYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDD+SA++AVVSANEELI+IR+EV +L S+SA DD+D++ D EKL ELYEKLQI+GSDAAEAQA+KILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLH+YRGNFDDFE+GYEQRRKE NKKFE ++KQVKAA+R+GSR QEKVK+RAK AAKEASKNK+KGKVD+DE LP+AP+KW+DY+VEFHFPEPTELTPPL+QLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGE+RRSQKLR+GRYSQHFVDLLTM+ETPVQYLLRLHPDQEG SKQEAVRAKLGK+GLPSHNHL+PIAKLSGGQKARVVFTSISMSKPHIL+LDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVC DEE+SEIWVVENGTVE FPGTF+EYKEELQ+EI+AEVDD
Sbjct: 1 MGKKKTEEVGLAAKAKTSNKDGKKE--KISVAAMLAGMDQKPDKPKKGSTSLSTAKAK---APKVTSYTDGIDLPPSDGEDDYGSEDEQKQQSEIRRQSNRLQRDDPKPLEISVTDKELKKREKKDLLAAHVAEQAKKEALKDDHDAFTVVIGSRASVLEGEDEADANVKDITIDNFSVAARGKELLKNASVKISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKSALEAVVSANEELIKIRQEVTSLQDSTSAVDDDDDSEDVNGNDVGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHVYRGNFDDFESGYEQRRKEMNKKFEIYDKQVKAARRSGSRAQQEKVKDRAKFAAAKEASKNKAKGKVDEDEALPEAPKKWKDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILMLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSEIWVVENGTVETFPGTFEEYKEELQREIKAEVDD 727
BLAST of DCAR_021320 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9FYY6 ((eIF2-interacting protein ABC50 (ABC superfamily) {ECO:0000313|EMBL:PIM98104.1}) (3.6.1.3 {ECO:0000313|EMBL:PIM98104.1}))
HSP 1 Score: 1234.55 bits (3193), Expect = 0.000e+0
Identity = 603/732 (82.38%), Postives = 660/732 (90.16%), Query Frame = 0
Match: A0A2G9FYY6 ((eIF2-interacting protein ABC50 (ABC superfamily) {ECO:0000313|EMBL:PIM98104.1}) (3.6.1.3 {ECO:0000313|EMBL:PIM98104.1}))
HSP 1 Score: 1234.55 bits (3193), Expect = 0.000e+0
Identity = 603/732 (82.38%), Postives = 660/732 (90.16%), Query Frame = 0
Query: 1 MGKKKSDESGANAKAKTNSKDAPKDAKKISVSAMLASMDQKPDKTKKASSSSTAGKSKPKAAPKVSSYVDGLDLPPSDEEDDDIASEEEIETSDANKQTVRHQKTEEKPLQISVTEKELKKREKKEMITAQAAEYAKKVALKDDRDAFTVVIGSRAAVLEGQDDADANVKDITIENFSVSARGKELLKNTSVKISHGQRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAVDAVVSANEELIQIREEVATLMKSSSAAGDDEDADGTASLDAAEKLTELYEKLQIMGSDAAEAQAAKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFETGYEQRRKEANKKFENHEKQVKAAKRTGSRVAQEKVKNRAKLTAAKEASKNKSKGKVDDDEPLPDAPRKWRDYTVEFHFPEPTELTPPLMQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEMRRSQKLRVGRYSQHFVDLLTMEETPVQYLLRLHPDQEGFSKQEAVRAKLGKYGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCGDEEKSEIWVVENGTVEKFPGTFDEYKEELQQEIRAEVDD 732
MGKKKSDE KAK +SKD K+SVSAMLASMD KPDK KK SS+S SKPK KVSSY+DG+DLP SDEEDD + SEEE + ++A KQ RH + KPL I+V+ KELKKREKK+++ QAAE AK+ ALKDDRDAFTVVIGSRA+VLEG++DADANVKDITI+NFSVSARGKELLKN +VKISHG+RYGLVGPNG GKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDR+A++AVVSANEELI +R+EVA+L +S+ D+ D D EKL+ELYEKLQ+MGSDAAEAQA+KILAGLGFTK MQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLH YRGNFDDFE+GYEQRRKE NKKFE ++KQVKAAKR+G+R QEKVK+RAK AAKEASKNK KGK D+DEPLP+AP+KWRDYTVEFHFPEPTELTPPL+QLIEVSFSYPNRDDF+LSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVP+EGE+RRSQKLR+GRYSQHFVDLLTM+ETPVQYLLRLHPDQEG SKQEAVRAKLGK+GLPSHNHL+PIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEF+GGVVLVSHDSRLISRVC DEE+S+IWVVENGTVE FPG+F+EYKEEL +EIRAEVDD
Sbjct: 1 MGKKKSDEGAT--KAKQSSKD------KLSVSAMLASMDAKPDKPKKGSSTS----SKPKPKAKVSSYIDGIDLPSSDEEDDVLDSEEEQKKNEAQKQPSRHGRNVAKPLDITVSNKELKKREKKDVLAIQAAELAKQEALKDDRDAFTVVIGSRASVLEGEEDADANVKDITIDNFSVSARGKELLKNATVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRTALEAVVSANEELINLRQEVASLQDASTVGNDENGDDYDEGDDVGEKLSELYEKLQLMGSDAAEAQASKILAGLGFTKAMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHFYRGNFDDFESGYEQRRKEMNKKFEIYDKQVKAAKRSGNRAQQEKVKDRAKFAAAKEASKNKGKGKADEDEPLPEAPQKWRDYTVEFHFPEPTELTPPLLQLIEVSFSYPNRDDFKLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFSGGVVLVSHDSRLISRVCEDEERSQIWVVENGTVESFPGSFEEYKEELVKEIRAEVDD 720
BLAST of DCAR_021320 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2C9W1U3 ((Uncharacterized protein {ECO:0000313|EMBL:OAY52905.1}))
HSP 1 Score: 1224.92 bits (3168), Expect = 0.000e+0
Identity = 599/733 (81.72%), Postives = 669/733 (91.27%), Query Frame = 0
Match: A0A2C9W1U3 ((Uncharacterized protein {ECO:0000313|EMBL:OAY52905.1}))
HSP 1 Score: 1224.92 bits (3168), Expect = 0.000e+0
Identity = 599/733 (81.72%), Postives = 669/733 (91.27%), Query Frame = 0
Query: 1 MGKKKSDESGANAKAKTNSKDAPKDAKKISVSAMLASMDQKPDKTKKASSSS-TAGKSKPKAAPKVSSYVDGLDLPPSDEEDDDIASEEEIETSDANKQTVRHQKTEEKPLQISVTEKELKKREKKEMITAQAAEYAKKVALKDDRDAFTVVIGSRAAVLEGQDDADANVKDITIENFSVSARGKELLKNTSVKISHGQRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAVDAVVSANEELIQIREEVATLMKSSSAAGDDEDADGTASLDAAEKLTELYEKLQIMGSDAAEAQAAKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFETGYEQRRKEANKKFENHEKQVKAAKRTGSRVAQEKVKNRAKLTAAKEASKNKSKGKVDDDEPLPDAPRKWRDYTVEFHFPEPTELTPPLMQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEMRRSQKLRVGRYSQHFVDLLTMEETPVQYLLRLHPDQEGFSKQEAVRAKLGKYGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCGDEEKSEIWVVENGTVEKFPGTFDEYKEELQQEIRAEVDD 732
MGKKK+ E+G AKA T KD K+ KISV+A+LA+MDQKPDK KK S+SS + K+K APKVSSY DG+DLPPSDEEDD ASE+E + + A +Q+ R Q+ + KPL ISVT+KELKKREKK+++ A A E AKK ALKDD DAFTVVIGSRA+VLEG+D+ADANVKDITI+NFSVSARGKELLKN SVKISHG+RYGLVGPNGMGKSTLLKL+AWRKIPVPKNIDVLLVEQEVVGDD++A++AVV+ANEEL++IR+EVA+L + AAGD ED D DA EKL ELYEKLQI+GSDAAEAQA+KILAGLGFT+EMQGR TRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLH YRGNFDDFE+GYEQRRKE NKKFE ++KQVKAA+R+G+RV QEKVK+RAK AAKEASK+K+KGK ++EPL +APRKW+DY+VEFHFPEPTELTPPL+QLIEVSFSYPNR+DFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVP+EGE+RRSQKLR+GRYSQHFVDLLTM+ETPVQYLLRLHP+QEG SKQEAVRAKLGK+GLPSHNHL+PIAKLSGGQKARVVFTSISMS+PHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVC +EE+SEIWVVENGTV +PGTF+EYKEELQ+EI+AEVDD
Sbjct: 1 MGKKKTGEAGVAAKAST--KDGKKE--KISVAALLANMDQKPDKPKKGSTSSLSTAKAK---APKVSSYTDGIDLPPSDEEDD-YASEDEEQQAGAKRQSSRQQRGDTKPLDISVTDKELKKREKKDLLAAYAVEQAKKEALKDDHDAFTVVIGSRASVLEGEDNADANVKDITIDNFSVSARGKELLKNASVKISHGKRYGLVGPNGMGKSTLLKLIAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVAANEELVKIRQEVASLQNLTLAAGD-EDGDDINGNDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTREMQGRRTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHFYRGNFDDFESGYEQRRKEVNKKFEIYDKQVKAARRSGNRVQQEKVKDRAKFAAAKEASKSKAKGKGGEEEPLAEAPRKWKDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPAEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPEQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCENEERSEIWVVENGTVNAYPGTFEEYKEELQKEIKAEVDD 724
BLAST of DCAR_021320 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5A7VGP5 ((ABC transporter F family member 4-like {ECO:0000313|EMBL:KAA0066330.1}))
HSP 1 Score: 1218.76 bits (3152), Expect = 0.000e+0
Identity = 593/733 (80.90%), Postives = 660/733 (90.04%), Query Frame = 0
Match: A0A5A7VGP5 ((ABC transporter F family member 4-like {ECO:0000313|EMBL:KAA0066330.1}))
HSP 1 Score: 1218.76 bits (3152), Expect = 0.000e+0
Identity = 593/733 (80.90%), Postives = 660/733 (90.04%), Query Frame = 0
Query: 1 MGKKKSDESGANAKAKTNSKDAPKDAKKISVSAMLASMDQKPDKTKKASSSSTAG-KSKPKAAPKVSSYVDGLDLPPSDEEDDDIASEEEIETSDANKQTVRHQKTEEKPLQISVTEKELKKREKKEMITAQAAEYAKKVALKDDRDAFTVVIGSRAAVLEGQDDADANVKDITIENFSVSARGKELLKNTSVKISHGQRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAVDAVVSANEELIQIREEVATLMKSSSAAGDDEDADGTASLDAAEKLTELYEKLQIMGSDAAEAQAAKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFETGYEQRRKEANKKFENHEKQVKAAKRTGSRVAQEKVKNRAKLTAAKEASKNKSKGKVDDDEPLPDAPRKWRDYTVEFHFPEPTELTPPLMQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEMRRSQKLRVGRYSQHFVDLLTMEETPVQYLLRLHPDQEGFSKQEAVRAKLGKYGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCGDEEKSEIWVVENGTVEKFPGTFDEYKEELQQEIRAEVDD 732
MG+KK++E G NAK K KD +K+SVS MLASMDQK DK +K SSS G K + KA KV++Y DG+DLPPSD+E+++I S+ E +++ + K+ + E KPL+++V++KELKKRE+K+M A AAE A++ ALKDD DAFTVVIGSRA+VL+G D+ADANVKDITI+NFSVSARGKELLKN SVKISHG+RYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSA+ AVVSANEEL+++R+EVA L S G DE+ D DA E+L ELYEKLQ++GSDAAEAQA+KILAGLGFTK+MQ RPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLN+VCNEIIHLHD +LH YRGNFDDFE+GYEQRRKE NKKFE ++KQVKAAKR+GSR QEKVK+RAK AAKEASKNKSKGKVD+DEPLP+APRKWRDY+VEFHFPEPTELTPPL+QLIEVSFSYPNR+DFRLS+VDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVP+EGE+RRSQKLR+GRYSQHFVDLLTMEETPVQYLLRLHPDQEG SKQEAVRAKLGK+GLPSHNHL+PIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVC DEEKSEIWVVENGTVE FPGTF+EYKEELQ+EI+AEVDD
Sbjct: 1 MGRKKTEEGGGNAKVKPG-KDVSGKREKLSVSEMLASMDQKSDKPRKGSSSLGGGAKPQAKAPKKVAAYTDGIDLPPSDDEEEEIVSDGEQQSTSSQKRLPWQDRAELKPLEVAVSDKELKKRERKDMFAAHAAEQARQEALKDDHDAFTVVIGSRASVLDGNDEADANVKDITIDNFSVSARGKELLKNASVKISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSALQAVVSANEELVKLRQEVADLQNSD--GGQDENDDD----DAGERLAELYEKLQLLGSDAAEAQASKILAGLGFTKDMQARPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNSVCNEIIHLHDFRLHFYRGNFDDFESGYEQRRKEMNKKFEIYDKQVKAAKRSGSRAQQEKVKDRAKFAAAKEASKNKSKGKVDEDEPLPEAPRKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLTMEETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVVENGTVEFFPGTFEEYKEELQKEIKAEVDD 726
BLAST of DCAR_021320 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3CJD6 ((ABC transporter F family member 4-like {ECO:0000313|RefSeq:XP_008462810.1, ECO:0000313|RefSeq:XP_008462811.1}))
HSP 1 Score: 1218.76 bits (3152), Expect = 0.000e+0
Identity = 593/733 (80.90%), Postives = 660/733 (90.04%), Query Frame = 0
Match: A0A1S3CJD6 ((ABC transporter F family member 4-like {ECO:0000313|RefSeq:XP_008462810.1, ECO:0000313|RefSeq:XP_008462811.1}))
HSP 1 Score: 1218.76 bits (3152), Expect = 0.000e+0
Identity = 593/733 (80.90%), Postives = 660/733 (90.04%), Query Frame = 0
Query: 1 MGKKKSDESGANAKAKTNSKDAPKDAKKISVSAMLASMDQKPDKTKKASSSSTAG-KSKPKAAPKVSSYVDGLDLPPSDEEDDDIASEEEIETSDANKQTVRHQKTEEKPLQISVTEKELKKREKKEMITAQAAEYAKKVALKDDRDAFTVVIGSRAAVLEGQDDADANVKDITIENFSVSARGKELLKNTSVKISHGQRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAVDAVVSANEELIQIREEVATLMKSSSAAGDDEDADGTASLDAAEKLTELYEKLQIMGSDAAEAQAAKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFETGYEQRRKEANKKFENHEKQVKAAKRTGSRVAQEKVKNRAKLTAAKEASKNKSKGKVDDDEPLPDAPRKWRDYTVEFHFPEPTELTPPLMQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEMRRSQKLRVGRYSQHFVDLLTMEETPVQYLLRLHPDQEGFSKQEAVRAKLGKYGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCGDEEKSEIWVVENGTVEKFPGTFDEYKEELQQEIRAEVDD 732
MG+KK++E G NAK K KD +K+SVS MLASMDQK DK +K SSS G K + KA KV++Y DG+DLPPSD+E+++I S+ E +++ + K+ + E KPL+++V++KELKKRE+K+M A AAE A++ ALKDD DAFTVVIGSRA+VL+G D+ADANVKDITI+NFSVSARGKELLKN SVKISHG+RYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSA+ AVVSANEEL+++R+EVA L S G DE+ D DA E+L ELYEKLQ++GSDAAEAQA+KILAGLGFTK+MQ RPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLN+VCNEIIHLHD +LH YRGNFDDFE+GYEQRRKE NKKFE ++KQVKAAKR+GSR QEKVK+RAK AAKEASKNKSKGKVD+DEPLP+APRKWRDY+VEFHFPEPTELTPPL+QLIEVSFSYPNR+DFRLS+VDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVP+EGE+RRSQKLR+GRYSQHFVDLLTMEETPVQYLLRLHPDQEG SKQEAVRAKLGK+GLPSHNHL+PIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVC DEEKSEIWVVENGTVE FPGTF+EYKEELQ+EI+AEVDD
Sbjct: 1 MGRKKTEEGGGNAKVKPG-KDVSGKREKLSVSEMLASMDQKSDKPRKGSSSLGGGAKPQAKAPKKVAAYTDGIDLPPSDDEEEEIVSDGEQQSTSSQKRLPWQDRAELKPLEVAVSDKELKKRERKDMFAAHAAEQARQEALKDDHDAFTVVIGSRASVLDGNDEADANVKDITIDNFSVSARGKELLKNASVKISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSALQAVVSANEELVKLRQEVADLQNSD--GGQDENDDD----DAGERLAELYEKLQLLGSDAAEAQASKILAGLGFTKDMQARPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNSVCNEIIHLHDFRLHFYRGNFDDFESGYEQRRKEMNKKFEIYDKQVKAAKRSGSRAQQEKVKDRAKFAAAKEASKNKSKGKVDEDEPLPEAPRKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLTMEETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVVENGTVEFFPGTFEEYKEELQKEIKAEVDD 726
BLAST of DCAR_021320 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4FMJ1 ((ABC transporter F family member 4 {ECO:0000313|RefSeq:XP_018832851.1, ECO:0000313|RefSeq:XP_018832857.1}))
HSP 1 Score: 1216.06 bits (3145), Expect = 0.000e+0
Identity = 613/737 (83.18%), Postives = 667/737 (90.50%), Query Frame = 0
Match: A0A2I4FMJ1 ((ABC transporter F family member 4 {ECO:0000313|RefSeq:XP_018832851.1, ECO:0000313|RefSeq:XP_018832857.1}))
HSP 1 Score: 1216.06 bits (3145), Expect = 0.000e+0
Identity = 613/737 (83.18%), Postives = 667/737 (90.50%), Query Frame = 0
Query: 1 MGKKKSDESGANAKAKTNSKDAPKDAKK--ISVSAMLASMDQKPDKTKKASSSSTAG---KSKPKAAPKVSSYVDGLDLPPSDEEDDDIASEEEIETSDANKQTVRHQKTEEKPLQISVTEKELKKREKKEMITAQAAEYAKKVALKDDRDAFTVVIGSRAAVLEGQDDADANVKDITIENFSVSARGKELLKNTSVKISHGQRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAVDAVVSANEELIQIREEVATLMKSSSAAGDDEDADGTASLDAAEKLTELYEKLQIMGSDAAEAQAAKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFETGYEQRRKEANKKFENHEKQVKAAKRTGSRVAQEKVKNRAKLTAAKEASKNKSKGKVDDDEPLPDAPRKWRDYTVEFHFPEPTELTPPLMQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEMRRSQKLRVGRYSQHFVDLLTMEETPVQYLLRLHPDQEGFSKQEAVRAKLGKYGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCGDEEKSEIWVVENGTVEKFPGTFDEYKEELQQEIRAEVDD 732
MGKKK +E GA K K SKD PKD KK +SVSAMLASMDQKPDK KK SSSS K K K APKVSSY D +DLPPSD+EDDD AS+EE +D K + R Q++E K L+IS++EKE+KKREKK++ A AAE AK+ ALKDD DAFTVVIGSR++VL+G D+ADANVKD+TI+NFSVSARGKELLKNTSVKISHG+RYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSA++AVVSANEEL+++R EVA L SSS + D DG DA EKL ELYEKLQI+GSDAAEAQA+KILAGLGFTKEMQ RPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLH YRGNFD+FE+GYEQRRKE NK++E +EKQ+KAAKR+GSR QEKVK+RAKL AAKEASKNK+KGKVD+DEPLP+AP+KWRDY+VEFHFPEPTELTPPLMQLIEVSFSYPNR DFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVP+EGE+RRSQKLR+GRYSQHFVDLLTMEETPVQYLLRLHPDQEG SKQEAVRAKLGK+GLPSHNHL+PIAKLSGGQK+RVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLI+RVC DEEKSEIWVVENGTV FPGTF+EYKEELQ+EI+AEVDD
Sbjct: 1 MGKKKPEEHGATTKTKVGSKDIPKDGKKEKLSVSAMLASMDQKPDKPKKGSSSSLTSTTSKPKTKVAPKVSSYTDDIDLPPSDDEDDDYASQEE--QTDGQKLSNRQQRSESKFLEISISEKEMKKREKKDVFAAHAAEQAKQEALKDDHDAFTVVIGSRSSVLDGGDEADANVKDVTIDNFSVSARGKELLKNTSVKISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSALEAVVSANEELVKLRNEVALLQNSSSVVEGENDDDGGNGDDAGEKLAELYEKLQILGSDAAEAQASKILAGLGFTKEMQVRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHSYRGNFDEFESGYEQRRKEMNKRYETYEKQIKAAKRSGSRAQQEKVKDRAKLNAAKEASKNKAKGKVDEDEPLPEAPKKWRDYSVEFHFPEPTELTPPLMQLIEVSFSYPNRVDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLTMEETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKSRVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLIARVCEDEEKSEIWVVENGTVRTFPGTFEEYKEELQREIKAEVDD 735
BLAST of DCAR_021320 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4D9ANM0 ((ATP-binding cassette, subfamily F, member 1 {ECO:0000313|EMBL:TEY62051.1}))
HSP 1 Score: 1213.75 bits (3139), Expect = 0.000e+0
Identity = 592/733 (80.76%), Postives = 663/733 (90.45%), Query Frame = 0
Match: A0A4D9ANM0 ((ATP-binding cassette, subfamily F, member 1 {ECO:0000313|EMBL:TEY62051.1}))
HSP 1 Score: 1213.75 bits (3139), Expect = 0.000e+0
Identity = 592/733 (80.76%), Postives = 663/733 (90.45%), Query Frame = 0
Query: 1 MGKKKSDESGANAKAKTNSKDAPKDAKKISVSAMLASMDQKPDKTKKASSSSTAGKSKPKAAPKVSSYVDGLDLPPSDEEDDDIASEEEIETSDANKQTVRHQKTEEKPLQISVTEKELKKREKKEMITAQAAEYAKKVALKDDRDAFTVVIGSRAAVLEGQDDADANVKDITIENFSVSARGKELLKNTSVKISHGQRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAVDAVVSANEELIQIREEVATLMKSSSAAGDDEDADGTASL-DAAEKLTELYEKLQIMGSDAAEAQAAKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFETGYEQRRKEANKKFENHEKQVKAAKRTGSRVAQEKVKNRAKLTAAKEASKNKSKGKVDDDEPLPDAPRKWRDYTVEFHFPEPTELTPPLMQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEMRRSQKLRVGRYSQHFVDLLTMEETPVQYLLRLHPDQEGFSKQEAVRAKLGKYGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCGDEEKSEIWVVENGTVEKFPGTFDEYKEELQQEIRAEVDD 732
MGKKKSDES A K+K +K+ K SV+ +LASMD KPDK KKAS+S++ K KPKAAPK SSY+DG+DLP SDEE+D + S+EE ++ N + + KP+ +T+KELKKR KK+++ AQAAE AKK ALKDDRDAFTVVIGSRA+VL+G++DADANVKDIT+ENFSV+ARGKELLKNTSVKISHG+RYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDR+A++AVVSANEEL+++R+EVA+L +S+ + D D + D AEKLTELYEKLQ+MGSDAAEAQA+KILAGLGFTK+MQGR TRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTL+VVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFE GYEQRRKEANKK E +EKQ++ AKR+GSR QEKVK+RAK AAKEASK+KSKGKVD+DEP+P+APRKW+DYTVEFHFPEPTELTPPLMQL+EVSFSYPNR+DFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVP+EGE+RRSQKLR+GRYSQHFVDLLTM+ETPVQYLLRLHP+QEG SKQEAVRAKLGK+GLPSHNHL+PIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVC DEEKS+IWVVENGTVE FP +F++YK+EL +EIRAEVDD
Sbjct: 1 MGKKKSDESAAGTKSKQGAKE------KFSVTELLASMDAKPDKPKKASASTS--KPKPKAAPKTSSYIDGIDLPSSDEEEDVLGSDEEAHLNEVNSR-----RNIAKPIDTGLTDKELKKRGKKDVLVAQAAEVAKKEALKDDRDAFTVVIGSRASVLDGENDADANVKDITVENFSVAARGKELLKNTSVKISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRTALEAVVSANEELVKLRQEVASLQDASTMSTGDGDEEDDDEGNDVAEKLTELYEKLQLMGSDAAEAQASKILAGLGFTKDMQGRATRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLIVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFEGGYEQRRKEANKKSEAYEKQLRNAKRSGSRTQQEKVKDRAKFNAAKEASKSKSKGKVDEDEPVPEAPRKWKDYTVEFHFPEPTELTPPLMQLLEVSFSYPNREDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPEQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCQDEEKSQIWVVENGTVEAFPDSFEDYKDELVKEIRAEVDD 720
BLAST of DCAR_021320 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A0A0LNE5 ((Uncharacterized protein {ECO:0000313|EMBL:KGN63343.1}))
HSP 1 Score: 1213.36 bits (3138), Expect = 0.000e+0
Identity = 590/733 (80.49%), Postives = 658/733 (89.77%), Query Frame = 0
Match: A0A0A0LNE5 ((Uncharacterized protein {ECO:0000313|EMBL:KGN63343.1}))
HSP 1 Score: 1213.36 bits (3138), Expect = 0.000e+0
Identity = 590/733 (80.49%), Postives = 658/733 (89.77%), Query Frame = 0
Query: 1 MGKKKSDESGANAKAKTNSKDAPKDAKKISVSAMLASMDQKPDKTKKASSSSTAG-KSKPKAAPKVSSYVDGLDLPPSDEEDDDIASEEEIETSDANKQTVRHQKTEEKPLQISVTEKELKKREKKEMITAQAAEYAKKVALKDDRDAFTVVIGSRAAVLEGQDDADANVKDITIENFSVSARGKELLKNTSVKISHGQRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAVDAVVSANEELIQIREEVATLMKSSSAAGDDEDADGTASLDAAEKLTELYEKLQIMGSDAAEAQAAKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFETGYEQRRKEANKKFENHEKQVKAAKRTGSRVAQEKVKNRAKLTAAKEASKNKSKGKVDDDEPLPDAPRKWRDYTVEFHFPEPTELTPPLMQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEMRRSQKLRVGRYSQHFVDLLTMEETPVQYLLRLHPDQEGFSKQEAVRAKLGKYGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCGDEEKSEIWVVENGTVEKFPGTFDEYKEELQQEIRAEVDD 732
MG+KK++E G NAK K KD +K+SVS MLASMDQK DK +K SSS G K + KA KV++Y DG+DLPPSD+E+++I S+ E +++ + K+ + E KPL+++V++KELKKRE+K+M A AAE A++ ALKDD DAFTVVIGSRA+VL+G D+ADANVKDITI+NFSVSARGKELLKN SVKISHG+RYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSA+ AVVSANEEL+++R+EVA L S G DE+ D DA E+L ELYEKLQ++GSDAAEAQA+KILAGLGFTK MQ RPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLN+VCNEIIHLHD +LH YRGNFDDFE+GYEQRRKE NKKFE ++KQVKAAKR+GSR QEKVK+RAK AAKEASKNKSKGKVD+D PLP+APRKWRDY+VEFHFPEPTELTPPL+QLIEVSFSYPNR+DFRLS+VDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDL+P+EGE+RRSQKLR+GRYSQHFVDLLTMEETPVQYLLRLHPDQEG SKQEAVRAKLGK+GLPSHNHL+PIAKLSGGQK+RVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVC DEEKSEIWVVENGTVE FPGTF+EYKEELQ+EI+AEVDD
Sbjct: 1 MGRKKTEEGGGNAKVKPG-KDVSGKREKLSVSEMLASMDQKSDKPRKGSSSLGGGAKPQAKAPKKVAAYTDGIDLPPSDDEEEEIVSDGEQQSTSSQKRLPWQDRAELKPLEVAVSDKELKKRERKDMFAAHAAEQARQEALKDDHDAFTVVIGSRASVLDGNDEADANVKDITIDNFSVSARGKELLKNASVKISHGKRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSALQAVVSANEELVKLRQEVADLQNSD--GGQDENDDD----DAGERLAELYEKLQLLGSDAAEAQASKILAGLGFTKNMQARPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNSVCNEIIHLHDFRLHFYRGNFDDFESGYEQRRKEMNKKFEIYDKQVKAAKRSGSRAQQEKVKDRAKFAAAKEASKNKSKGKVDEDGPLPEAPRKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLIPTEGEVRRSQKLRIGRYSQHFVDLLTMEETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKSRVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEEKSEIWVVENGTVEFFPGTFEEYKEELQKEIKAEVDD 726
BLAST of DCAR_021320 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5ABP7 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8527980.1}))
HSP 1 Score: 1212.98 bits (3137), Expect = 0.000e+0
Identity = 591/736 (80.30%), Postives = 664/736 (90.22%), Query Frame = 0
HSP 2 Score: 1203.73 bits (3113), Expect = 0.000e+0
Identity = 587/733 (80.08%), Postives = 660/733 (90.04%), Query Frame = 0
Match: A0A5J5ABP7 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8527980.1}))
HSP 1 Score: 1212.98 bits (3137), Expect = 0.000e+0
Identity = 591/736 (80.30%), Postives = 664/736 (90.22%), Query Frame = 0
Query: 1 MGKKKSDESGANAKAKTNSKDAPKDAKK--ISVSAMLASMDQKPDKTKKASSS--STAGKSKPKAAPKVSSYVDGLDLPPSDEEDDDIASEEEIETSDANKQTVRHQKTEEKPLQISVTEKELKKREKKEMITAQAAEYAKKVALKDDRDAFTVVIGSRAAVLEGQDDADANVKDITIENFSVSARGKELLKNTSVKISHGQRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAVDAVVSANEELIQIREEVATLMKSSSAAGDDEDADGTASLDAAEKLTELYEKLQIMGSDAAEAQAAKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFETGYEQRRKEANKKFENHEKQVKAAKRTGSRVAQEKVKNRAKLTAAKEASKNKSKGKVDDDEPLPDAPRKWRDYTVEFHFPEPTELTPPLMQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEMRRSQKLRVGRYSQHFVDLLTMEETPVQYLLRLHPDQEGFSKQEAVRAKLGKYGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCGDEEKSEIWVVENGTVEKFPGTFDEYKEELQQEIRAEVDD 732
MGKKK++E+G K K +SKDA K+ KK +SVSAMLASMDQKPDKTKK SSS +TAGK K K A K SY DG+DLPPSD++D++ ASEEE + ++ + Q+T+ +P+ IS+T KELKKREKK+M+ A AAE AKK LKDDRDAFTVVIGS+A+VL+G+D+ADANVKDIT++NFSVSARGKELLKN SVKISHG+RYGLVGPNG GKSTLLKLLAWRKIPVP+NIDVLLVEQEVVGDD++A++AVVSANEEL+++R EVA L SSS GDD D DA EKL ELYE+LQ++GSDAAEAQA+KILAGLGFTK+MQGR TRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTL+VVSHDRDFLNTVC+EIIHLHDLKLH YRGNFDDFE+GYEQRRKE NKKFE ++KQ+KAAKRTG+RV QEKVK+RAK A+KEASK+K+KGKV++DE +AP+KW+DY+VEFHFPEPTELTPPL+QLIEVSFSYPNR+DFRLSNVDVGIDMGTRVAI+GPNGAGKSTLLNLLAGDLVP+EGE+RRSQKLR+GRYSQHFVDLLTMEETPVQYLLRLHP+QEG SKQEAVR KLGK+GLPSHNHL+PI KLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVC DEE+SEIWVVENGTV FPGTF+EYKEELQ EI+AEVDD
Sbjct: 751 MGKKKAEEAGPGTKVKPSSKDASKENKKEKLSVSAMLASMDQKPDKTKKGSSSLSTTAGKPKKKVASKFPSYTDGIDLPPSDDDDEEHASEEEQQEDGVFRRPNQQQRTDSRPIDISITNKELKKREKKDMLAAHAAEQAKKEVLKDDRDAFTVVIGSKASVLDGEDEADANVKDITVDNFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPRNIDVLLVEQEVVGDDKTAIEAVVSANEELVKLRNEVAFLQNSSSVTGDDNRDDDYDGDDAGEKLAELYERLQLIGSDAAEAQASKILAGLGFTKDMQGRATRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLIVVSHDRDFLNTVCSEIIHLHDLKLHFYRGNFDDFESGYEQRRKEMNKKFEIYDKQMKAAKRTGNRVQQEKVKDRAKFAASKEASKSKAKGKVEEDETPLEAPKKWKDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIIGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLTMEETPVQYLLRLHPEQEGLSKQEAVRGKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSEIWVVENGTVRTFPGTFEEYKEELQSEIKAEVDD 1486
HSP 2 Score: 1203.73 bits (3113), Expect = 0.000e+0
Identity = 587/733 (80.08%), Postives = 660/733 (90.04%), Query Frame = 0
Query: 1 MGKKKSDESGANAKAKTNSKDAPKDAKK--ISVSAMLASMDQKPDKTKKASSS--STAGKSKPKAAPKVSSYVDGLDLPPSDEEDDDIASEEEIETSDANKQTVRHQKTEEKPLQISVTEKELKKREKKEMITAQAAEYAKKVALKDDRDAFTVVIGSRAAVLEGQDDADANVKDITIENFSVSARGKELLKNTSVKISHGQRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAVDAVVSANEELIQIREEVATLMKSSSAAGDDEDADGTASLDAAEKLTELYEKLQIMGSDAAEAQAAKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFETGYEQRRKEANKKFENHEKQVKAAKRTGSRVAQEKVKNRAKLTAAKEASKNKSKGKVDDDEPLPDAPRKWRDYTVEFHFPEPTELTPPLMQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEMRRSQKLRVGRYSQHFVDLLTMEETPVQYLLRLHPDQEGFSKQEAVRAKLGKYGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCGDEEKSEIWVVENGTVEKFPGTFDEYKEELQQEIRAE 729
MGKKK++E+G K K +SKDA K+ KK +SVSAMLASMDQKPDKTKK SSS +TAGK K K A K+ SY DG+DLPPSD++D++ ASEEE + + + Q+T+ +P+ IS+T KELKKREKK+M+ A AAE AKK LKDD DAFTVVIGS+A+VL+G+D+ADANVKDI ++NFSVSARGKELLKN SVKISHG+RYGLVGPNG GKSTLLKLLAWRKIPVP+NIDVLLVEQEVVGDD++A++AVVSANEEL+++R EVA L SSS GDD D DA EKL ELYE+LQ++GSDAAEAQA+KILAGLGFTK+MQGR TRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTL+VVSHDRDFLNTVC+EIIHLHDLKLH YRGNFDDFE+GYEQRRKE NKKFE ++KQ+KAAKRTGSRV QEKVK+RAK A+KEASK+K+KGKV++DE +AP+KW+DY+VEFHFPEPTELTPPL+QLIEVSFSYPNR+DFRLSNVDVGIDMGTRVAI+GPNGAGKSTLLNLLAGDLVP+EGE+RRSQKLR+GRYSQHFVDLLTMEETPVQYLLRLHP+QEG SKQEAVR KLGK+GLPSHNHL+PI KLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVC DEE+SEIWVVENGTV FPGTF+EYKEELQ+EI+AE
Sbjct: 1 MGKKKTEEAGPGTKVKPSSKDASKENKKEKLSVSAMLASMDQKPDKTKKGSSSLSTTAGKPKKKVASKLPSYTDGIDLPPSDDDDEEHASEEEQQEDGVFRLPNQQQRTDSRPIDISITNKELKKREKKDMLAAHAAEQAKKEVLKDDHDAFTVVIGSKASVLDGEDEADANVKDIAVDNFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPRNIDVLLVEQEVVGDDKTAIEAVVSANEELVKLRNEVAFLQNSSSVTGDDNRDDDYDGDDAGEKLAELYERLQLIGSDAAEAQASKILAGLGFTKDMQGRATRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLIVVSHDRDFLNTVCSEIIHLHDLKLHFYRGNFDDFESGYEQRRKEMNKKFEVYDKQMKAAKRTGSRVQQEKVKDRAKFAASKEASKSKAKGKVEEDETPLEAPKKWKDYSVEFHFPEPTELTPPLLQLIEVSFSYPNREDFRLSNVDVGIDMGTRVAIIGPNGAGKSTLLNLLAGDLVPTEGEVRRSQKLRIGRYSQHFVDLLTMEETPVQYLLRLHPEQEGLSKQEAVRGKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCEDEERSEIWVVENGTVRTFPGTFEEYKEELQREIKAE 733
BLAST of DCAR_021320 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5A7PC53 (Transaldolase {ECO:0000256|ARBA:ARBA00013151} (2.2.1.2 {ECO:0000256|ARBA:ARBA00013151}))
HSP 1 Score: 1212.59 bits (3136), Expect = 0.000e+0
Identity = 598/736 (81.25%), Postives = 660/736 (89.67%), Query Frame = 0
Match: A0A5A7PC53 (Transaldolase {ECO:0000256|ARBA:ARBA00013151} (2.2.1.2 {ECO:0000256|ARBA:ARBA00013151}))
HSP 1 Score: 1212.59 bits (3136), Expect = 0.000e+0
Identity = 598/736 (81.25%), Postives = 660/736 (89.67%), Query Frame = 0
Query: 1 MGKKKSDESGANAKAKTNSKDAPKDAKKISVSAMLASMDQKPDKTKKASSSSTAGKSKPKAAPKVSSYVDGLDLPPSDEEDDD-IASEEEIETSDANKQTVRHQKTEEKPLQISVTEKELKKREKKEMITAQAAEYAKKVALKDDRDAFTVVIGSRAAVLEGQDDADANVKDITIENFSVSARGKELLKNTSVKISHGQRYGLVGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRSAVDAVVSANEELIQIREEVATLMKSSS--AAGDDEDADGTASLDAAEKLTELYEKLQIMGSDAAEAQAAKILAGLGFTKEMQGRPTRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHLYRGNFDDFETGYEQRRKEANKKFENHEKQVKAAKRTGSRVAQEKVKNRAKLTAAKEASKNKSKGKV-DDDEPLPDAPRKWRDYTVEFHFPEPTELTPPLMQLIEVSFSYPNRDDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEMRRSQKLRVGRYSQHFVDLLTMEETPVQYLLRLHPDQEGFSKQEAVRAKLGKYGLPSHNHLSPIAKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCGDEEKSEIWVVENGTVEKFPGTFDEYKEELQQEIRAEVDD 732
MGKKKSDES A KAK +SK+ K+SVSAMLASMD KPDK KK +SS K KPKAAPK+SSY DG+DLP SDEE+DD + SEEE + D+++ R +TE +PL I+++ KELKKREKK++ QAAE AK+ AL DDRDAFTVVIGSRA+VL+G+D+ADANVKDITI+NFSVSARGKELLKN SVKISHG+RYGLVGPNG GKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDR+A++AVVSANEELI++R+EVA+L +S AG++ED DA KL+ELYEKLQ+MGSDAAEAQA+KILAGLGFTK+MQ R TRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHD+KLHLYRGNFD+FE GYEQRRKE NKKFE ++KQVKAAKR+GSR QEKVK+RAK AAKEASKNK KGKV D+DEPLP+AP+KWRDYTVEFHFPEPTELTPPL+QLIEVSFSYPNR DFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDL PSEGE+RRSQKLR+GRYSQHFVDLLTM ETPVQYLLRLHPDQEG SKQEAVRAKLGK+GLPSHNHL+PIAKLSGGQKARVVF SISM+KPHILLLDEPTNHLDMQSIDALADALDEF+GGVVLVSHDSRLISRVC DEE+SEIW V+NGTV+ FPG+F+EYKEEL +EIRAEVDD
Sbjct: 444 MGKKKSDESAAGTKAKQSSKE------KLSVSAMLASMDSKPDKPKKGPTSS---KPKPKAAPKLSSYTDGIDLPSSDEEEDDMLGSEEEQKQYDSHRNPSRQTRTESRPLDINISNKELKKREKKDLFANQAAELAKQEALMDDRDAFTVVIGSRASVLDGEDEADANVKDITIDNFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDRTALEAVVSANEELIKLRQEVASLQDDASNVPAGEEED-------DAGGKLSELYEKLQLMGSDAAEAQASKILAGLGFTKDMQCRATRSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDMKLHLYRGNFDEFEVGYEQRRKEMNKKFEIYDKQVKAAKRSGSRAQQEKVKDRAKFNAAKEASKNKGKGKVVDEDEPLPEAPQKWRDYTVEFHFPEPTELTPPLLQLIEVSFSYPNRKDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLEPSEGEVRRSQKLRIGRYSQHFVDLLTMNETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIAKLSGGQKARVVFASISMAKPHILLLDEPTNHLDMQSIDALADALDEFSGGVVLVSHDSRLISRVCEDEERSEIWEVKNGTVKAFPGSFEEYKEELVKEIRAEVDD 1163
| Match Name | Stats | Description |
|---|---|---|
| A0A067LJM7 | E-Value: 0.000e+0, PID: 82.79 | (Uncharacterized protein {ECO:0000313|EMBL:KDP4449... [more] |
| A0A2G9FYY6 | E-Value: 0.000e+0, PID: 82.38 | (eIF2-interacting protein ABC50 (ABC superfamily) ... [more] |
| A0A2C9W1U3 | E-Value: 0.000e+0, PID: 81.72 | (Uncharacterized protein {ECO:0000313|EMBL:OAY5290... [more] |
| A0A5A7VGP5 | E-Value: 0.000e+0, PID: 80.90 | (ABC transporter F family member 4-like {ECO:00003... [more] |
| A0A1S3CJD6 | E-Value: 0.000e+0, PID: 80.90 | (ABC transporter F family member 4-like {ECO:00003... [more] |
| A0A2I4FMJ1 | E-Value: 0.000e+0, PID: 83.18 | (ABC transporter F family member 4 {ECO:0000313|Re... [more] |
| A0A4D9ANM0 | E-Value: 0.000e+0, PID: 80.76 | (ATP-binding cassette, subfamily F, member 1 {ECO:... [more] |
| A0A0A0LNE5 | E-Value: 0.000e+0, PID: 80.49 | (Uncharacterized protein {ECO:0000313|EMBL:KGN6334... [more] |
| A0A5J5ABP7 | E-Value: 0.000e+0, PID: 80.30 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8527... [more] |
| A0A5A7PC53 | E-Value: 0.000e+0, PID: 81.25 | Transaldolase {ECO:0000256|ARBA:ARBA00013151} (2.2... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |