Resource Type:
Polypeptide
Name:
DCAR_021311
Identifier:
DCAR_021311.mRNA-protein
Sequence:
MSKFSRNSSTVNHIGHSGLSVDDDFPPLSKIRSGAEGKSAVTESNAVGNL
LPGNEDDLLAGVMDDFDLSDLPTQLEDLEDELFDSGGGMEMDFDFQDSLL
TGVSSLSMSDGVHNGIGSHSLTNSGGTVAGEHPYGEHPSRTLFVRNINSN
VEDSELKSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKP
LRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRNIFGAYGE
VKEIRETPHKRHHKFIEYYDVRAAEEALKALNRIDIAGKRIKLEPSRPGG
ARRNLLQQLSQELDQDETWTFRNQVGSPLNSPPGNWTHFGSPVSVQGFNL
SPGWETLSPVNSNQVKIHGLASILPARLSNPVKIAPIGKESKEHGRSLQG
VAYQHSHSFPDQKPSASPIAVSSLGDSSSNPSGVGTLSGPQFLWGSPTTN
SMSSNTSAWPTSSTGVSFTSNGQGKGHLFPSRPSTSIGSHHYHHVGSAPT
GMPLDRHISYLPESPEISFLSPVAYGGLNRNNRSYMTNIPLAGLGIGIAP
LGNMFENGSPSSRMMSIPRNGPIYFGNGSYQGTGLIHDGLAERARARQIE
YAGNQLENKKQYQLELDKIMSGEDRRTTLMIKNIPNKYTSKMLLLAIDEN
HGGTYDFLYLPIDFKNKCNVGYAFINMISPSHIISFYQVELLLFALL*
Sequence Length:
698
Sequence Checksum:
a4cd5685e1082f0bed1e41ae04d5eaaf
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, DCAR_021311, derives from mRNA, DCAR_021311. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of DCAR_021311 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_021311 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AHI7 ((Uncharacterized protein {ECO:0000313|EMBL:MPA56242.1}))
HSP 1 Score: 967.992 bits (2501), Expect = 0.000e+0
Identity = 493/694 (71.04%), Postives = 567/694 (81.70%), Query Frame = 0
Match: A0A5B7AHI7 ((Uncharacterized protein {ECO:0000313|EMBL:MPA56242.1}))
HSP 1 Score: 967.992 bits (2501), Expect = 0.000e+0
Identity = 493/694 (71.04%), Postives = 567/694 (81.70%), Query Frame = 0
Query: 16 HSGLSVDDDFPPLSKIRSGAEGKSAV--TESNAVGNLLPGNEDDLLAGVMDDFDLSDLPTQLEDLEDELFDSGGGMEMDFDFQDSLLTGVSSLSMSDGVH-NGIGSHSLTNSGGTVAGEHPYGEHPSRTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRNIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEEALKALNRIDIAGKRIKLEPSRPGGARRNLLQQLSQELDQDETWTFRNQVGSPL-NSPPGNWTHFGSPVS---VQGFNLSPGWETLSPVNSNQVKIHGLASILPARLSNPVKIAPIGKESKE---------HGRSLQGVAYQHSHSFPDQKPSASPIAVSSLGDSSSNPSGVGTLSGPQFLWGSPTTNSMSSNTSAWPTSSTGVSFTSNGQGKGHLFPSRPSTSIGSHHYHHVGSAPTGMPLDRHISYLPESPEISFLSPVAYG--GLNRNNRSYMTNI-PLAGLGIGIAPLGNMFENGSPSSRMMSIPRNGPIYFGNGSYQGTGLI-HDGLAERARARQIEYAGNQLENKKQYQLELDKIMSGEDRRTTLMIKNIPNKYTSKMLLLAIDENHGGTYDFLYLPIDFKNKCNVGYAFINMISPSHIISFYQV 689
H G SVDD P L+K+ +GK + + NA+G+LLPG+ED+LLAG+MDDFDLS P QLEDLED++F SGGGME+DF+ Q+SL+ G+S+LSMSDGV NGIG L N GTVAGEHPYGEHPSRTLFVRNINSNVEDSEL+SLFEQYGDIRTLYTACKHRGFVMISYYDIR ARTAMR LQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLR IFGAYGEVKEIRETPHKRHHKFIE+YDVR A+ ALKALNR DIAGKRIKLEPSRPGGARRN++QQL+QEL+QDE TF++QVGSPL NSPPGNW HF SPV +Q F+ SPG T SP+ SN + GLASILP +SN KIAPIGK+ + +S QG AY S+S P+Q SASP VSS G+S+SN SG+GTLSGPQFLWGSPT + +N+SAWPTSS G SF SNGQG+G+ +PSR + +GS H HHVGSAP+G PLDRH Y PESPE SF SPVA+G GL+RN+ +YM N+ A + +G+A GNM E+GSP+SRMM +PRN PI+F NGSYQG G + ++GLAER R R++EY+ NQ++NKKQYQL+LDKI++GED RTTLMIKNIPNKYTSKMLL AIDENH GTYDFLYLPIDFKNKCNVGYAFINM+SPSHII FY+
Sbjct: 69 HCGQSVDDGLPSLNKLHQEDDGKDPLEDIDQNAIGSLLPGDEDELLAGIMDDFDLSGWPMQLEDLEDDIFGSGGGMELDFEPQESLMFGMSNLSMSDGVAGNGIGHCGLPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRDARTAMRGLQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRDADAALKALNRSDIAGKRIKLEPSRPGGARRNMMQQLNQELEQDEARTFQHQVGSPLTNSPPGNWPHFSSPVEHNPLQSFSQSPGSGTQSPMKSNHLP--GLASILPPNVSNIAKIAPIGKDLGRVSHVNQVIGNAKSTQGAAYHLSNSVPEQILSASPGPVSSFGESNSNSSGIGTLSGPQFLWGSPTPYTERTNSSAWPTSSVGHSFASNGQGQGYPYPSRHGSFLGSLHIHHVGSAPSGGPLDRHFGYFPESPETSFTSPVAFGNMGLSRNSGNYMMNMGARAAMSVGVALSGNMTESGSPNSRMMPLPRNAPIFFRNGSYQGMGAMSNEGLAERGRNRRVEYSVNQIDNKKQYQLDLDKIINGEDTRTTLMIKNIPNKYTSKMLLEAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIIPFYKA 760
BLAST of DCAR_021311 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EL69 ((Uncharacterized protein {ECO:0000313|EMBL:THG16835.1}))
HSP 1 Score: 964.14 bits (2491), Expect = 0.000e+0
Identity = 491/697 (70.44%), Postives = 563/697 (80.77%), Query Frame = 0
Match: A0A4S4EL69 ((Uncharacterized protein {ECO:0000313|EMBL:THG16835.1}))
HSP 1 Score: 964.14 bits (2491), Expect = 0.000e+0
Identity = 491/697 (70.44%), Postives = 563/697 (80.77%), Query Frame = 0
Query: 16 HSGLSVDDDFPPLSKIRSGAEGKSAV--TESNAVGNLLPGNEDDLLAGVMDDFDLSDLPTQLEDLEDE-LFDSGGGMEMDFDFQDSLLTGVSSLSMSDGVH-NGIGSHSLTNSGGTVAGEHPYGEHPSRTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRNIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEEALKALNRIDIAGKRIKLEPSRPGGARRNLLQQLSQELDQDETWTFRNQVGSPL-NSPPGNWTHFGSPVS---VQGFNLSPGWETLSPVNSNQVKIHGLASILPARLSNPVKIAPIGKESKEHGR------------SLQGVAYQHSHSFPDQKPSASPIAVSSLGDSSSNPSGVGTLSGPQFLWGSPTTNSMSSNTSAWPTSSTGVSFTSNGQGKGHLFPSRPSTSIGSHHYHHVGSAPTGMPLDRHISYLPESPEISFLSPVAYG--GLNRNNRSYMTNI-PLAGLGIGIAPLGNMFENGSPSSRMMSIPRNGPIYFGNGSYQGTGL-IHDGLAERARARQIEYAGNQLENKKQYQLELDKIMSGEDRRTTLMIKNIPNKYTSKMLLLAIDENHGGTYDFLYLPIDFKNKCNVGYAFINMISPSHIISFYQ 688
H G SVDD FP L K+ + K + E +A+G LLPG+E++LLAG+MDDFDLS LPTQLEDLED+ F SGGGME+DFD Q+SL +S LSMSDGV NGIG + L N TVAGEHPYGEHPSRTLFVRNINSNVEDSEL SLFEQYGDIR LYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLR IFG YGEVKEIRETPHKRHHKFIE+YDVRAAE ALKALNR DIAGKRIKLEPSRPGGARRNL+QQL+QEL+QDE +FR+ VGSP+ NSPPGNW HFGSPV +QGF+ SP LSP+ SN + GLASIL +SNP KIAPIG K+ GR S QGV YQ SHSFP+QK SASP +SS G+S+SN SG+GTLSGPQFLWG+PT S +++SAWPTSS G F + QG+G+ + ++ + +GSHH HHVGSAP+G+PLDRH Y PESPE SF++ VA+G GLNR SY+ N+ + +G+A GNM E+GSPSSRMMS+PRNGP++FGNG+ QG G+ I++GL ER R+R++EY+ NQ+++KKQYQL+LDKI SGED RTTLMIKNIPNKYTSKMLL AIDENHGGTYDFLYLPIDFKNKCNVGYAFINM+ PSHII FY+
Sbjct: 65 HCGQSVDDGFPTLKKLHQEDDSKDPLEDVEPSAIGTLLPGDENELLAGIMDDFDLSGLPTQLEDLEDDDFFGSGGGMELDFDSQESLNIAMSKLSMSDGVSVNGIGHYGLPNGVATVAGEHPYGEHPSRTLFVRNINSNVEDSELVSLFEQYGDIRNLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRQIFGTYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLTQELEQDEARSFRHPVGSPVNNSPPGNWPHFGSPVEHNPLQGFSQSPVLGPLSPIKSNHMP--GLASILSPHVSNPAKIAPIG---KDQGRISHVSQVIGNVNSTQGVGYQLSHSFPEQKLSASPGPMSSFGESNSNSSGIGTLSGPQFLWGNPTPYSEHTSSSAWPTSSVGNPFAPSTQGQGYPYSNQHGSFLGSHHLHHVGSAPSGVPLDRHFGYFPESPETSFMNHVAFGGMGLNRKTASYVMNMGARPAMSVGVALPGNMSESGSPSSRMMSLPRNGPLFFGNGTLQGIGVTINEGLLERGRSRRVEYSVNQIDSKKQYQLDLDKIKSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHGGTYDFLYLPIDFKNKCNVGYAFINMVFPSHIIPFYE 756
BLAST of DCAR_021311 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5A7H4 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8526209.1}))
HSP 1 Score: 956.051 bits (2470), Expect = 0.000e+0
Identity = 493/695 (70.94%), Postives = 564/695 (81.15%), Query Frame = 0
Match: A0A5J5A7H4 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8526209.1}))
HSP 1 Score: 956.051 bits (2470), Expect = 0.000e+0
Identity = 493/695 (70.94%), Postives = 564/695 (81.15%), Query Frame = 0
Query: 15 GHSGLSVDDDFPPLSKI--RSGAEGKSAVTESNAVGNLLPGNEDDLLAGVMDDFDLSDLPTQLEDLEDELFDSGGGMEMDFDFQDSLLTGVSSLSMSDGVH-NGIGSHSLTNSGGTVAGEHPYGEHPSRTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRNIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEEALKALNRIDIAGKRIKLEPSRPGGARRNLLQQLSQELDQDETWTFRNQVGSPL-NSPPGNWTHFGSPVS---VQGFNLSPGWETLSPVNSNQVKIHGLASILPARLSNPVKIAPIGKESKE---------HGRSLQGVAYQHSHSFPDQKPSASPIAVSSLGDSSSNPSGVGTLSGPQFLWGSPTTNSMSSNTSAWPTSSTGVSFTSNGQGKGHLFPSRPSTSIGSHHYHHVGSAPTGMPLDRHISYLPESPEISFLSPVAYG--GLNRNNRSYMTNIPLAG-LGIGIAPLGNMFENGSPSSRMMSIPRNGPIYFGNGSYQGTGLI-HDGLAERARARQIEYAGNQLENKKQYQLELDKIMSGEDRRTTLMIKNIPNKYTSKMLLLAIDENHGGTYDFLYLPIDFKNKCNVGYAFINMISPSHIISFYQV 689
GH G SVDD P L+K+ G E NA+G+LLPG+ED+LLAG+MDDFDLS LPTQLEDLED++F SGGGME+DF+ Q+SLL G+S+LSMSDGV NGIG + L N GTVAGEHPYGEHPSRTLFVRNINSNVEDSEL+SLFEQ GDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLR IFGAYGEVKEIRETPHKRHHKFIE+YDVRAAE ALKALNR DIAGKRIKLEPSRPGGARRNL+Q LSQEL+ DE TFR+QVGSPL NSPPGNW +F SPV +Q F+ SPG LSP+ SN + GLASILPA +SNP IAPIGK+ H +S Q YQHSHS P+QK SASP S G+S+SN S +GTLSGPQFLWGSPT S +N+SAWPTSS G FT +GQG+ + S+ + + SHH HHVGSAP+G+PLDRH Y ESPE SF+SP+A G GL+ N+ SY+ N+ G + +G++ GNM E+GSPSSRM+ + RNGPI+FGNGSYQG G ++GLAERAR+R+IEY+ NQ++NK+Q+QL+LDKI+SGED RTTLMIKNIPNKYTSKMLL AIDENH GTYDFLYLPIDFKNKCNVGYAFINM+SPS+II F++
Sbjct: 116 GHCGQSVDDGLPSLNKLHQEDGVEDPLDNIVQNAIGSLLPGDEDELLAGIMDDFDLSRLPTQLEDLEDDIFGSGGGMELDFEPQESLLFGMSNLSMSDGVAGNGIGHYGLPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRSLFEQSGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRNLMQLLSQELEPDEARTFRHQVGSPLTNSPPGNWPYFSSPVEHNPLQDFSQSPGLGILSPMRSNHLP--GLASILPASVSNPANIAPIGKDQGRVSHVNQLIGHAKSTQETVYQHSHSLPEQKLSASPGPEYSFGESNSNSSCIGTLSGPQFLWGSPTPYSERTNSSAWPTSSVGRPFTPSGQGQRYPHSSQHDSFLVSHH-HHVGSAPSGVPLDRHFGYFLESPETSFMSPIALGSTGLSHNSGSYVMNMGARGAMSVGVSLQGNMTESGSPSSRMIPLLRNGPIFFGNGSYQGMGATNNEGLAERARSRRIEYSVNQIDNKRQFQLDLDKIISGEDTRTTLMIKNIPNKYTSKMLLEAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMVSPSNIIPFFKA 807
BLAST of DCAR_021311 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5A877 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8526208.1}))
HSP 1 Score: 952.97 bits (2462), Expect = 0.000e+0
Identity = 494/694 (71.18%), Postives = 570/694 (82.13%), Query Frame = 0
Match: A0A5J5A877 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8526208.1}))
HSP 1 Score: 952.97 bits (2462), Expect = 0.000e+0
Identity = 494/694 (71.18%), Postives = 570/694 (82.13%), Query Frame = 0
Query: 16 HSGLSVDDDFPPLSKIRSGAEGKSAVTES--NAVGNLLPGNEDDLLAGVMDDFDLSDLPTQLEDLEDELFDSGGGMEMDFDFQDSLLTGVSSLSMSDGVH-NGIGSHSLTNSGGTVAGEHPYGEHPSRTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRNIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEEALKALNRIDIAGKRIKLEPSRPGGARRNLLQQLSQELDQDETWTFRNQVGSPL-NSPPGNWTHFGSPVS---VQGFNLSPGWETLSPVNSNQVKIHGLASILPARLSNPVKIAPIGKESKE---------HGRSLQGVAYQHSHSFPDQKPSASPIAVSSLGDSSSNPSGVGTLSGPQFLWGSPTTNSMSSNTSAWPTSSTGVSFTSNGQGKGHLFPSRPSTSIGSHHYHHVGSAPTGMPLDRHISYLPESPEISFLSPVAYG--GLNRNNRSYMTNIPLAG-LGIGIAPLGNMFENGSPSSRMMSIPRNGPIYFGNGSYQGTGLI-HDGLAERARARQIEYAGNQLENKKQYQLELDKIMSGEDRRTTLMIKNIPNKYTSKMLLLAIDENHGGTYDFLYLPIDFKNKCNVGYAFINMISPSHIISFYQV 689
H G VDD P L+K+ + K + + NA+G+LLPG+EDDLLAG+MDDFDLS LP QLEDLED++F SGGGME+DF+ Q+SLL G+S+LSMSDGV N IG + L N GTVAGEHPYGEHPSRTLFVRNINSNVEDSEL+SLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDD+R IFGAYGEVKEIRETPHKRHHKFIE+YDVRAAE ALKALNR DIAGKRIKLEPSRPGGARRNL+QQL+QEL+QDE TFR+ VGSP+ NSPPGNW +F SPV +Q F+ SPG LSP+ SN + GLASILPAR+SNP IAPIGK+ H S Q V YQHSHS P+QK SASP SS G+S+SN S +GTLSGP+FLWGSPT S +N+SAWPTSS G FTS+GQG+G+ + S+ ++ + SHH+HHVGSAP+G PLDRH Y+PESPE SF+SP+A G GL+ N+ SY+ N+ G +G+G++ GN+ E+GSPSSRM+ + RNGPI+FGNGSYQ G +DGLAER R+R+IEY+ NQ++N +QYQL+LDKI+SGED RTTLMIKNIPNKYTSKMLL AIDENH GTYDFLYLPIDFKNKCNVGYAFINM+SPSHII FY+
Sbjct: 69 HCGQFVDDGLPSLNKLHQEDDVKDPLENNVQNAIGSLLPGDEDDLLAGIMDDFDLSRLPMQLEDLEDDIFGSGGGMELDFEPQESLLFGMSNLSMSDGVAGNEIGHYGLPNGMGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDIRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLNQELEQDEARTFRHPVGSPVTNSPPGNWPYFSSPVEHNPLQDFSQSPGLGILSPMKSNHLP--GLASILPARVSNPANIAPIGKDQGRVSHVNQLIGHVTSTQAV-YQHSHSLPEQKLSASPGPESSFGESNSNSSCIGTLSGPEFLWGSPTPYSERTNSSAWPTSSVGHPFTSSGQGQGYPYSSQHNSFLVSHHHHHVGSAPSGFPLDRHFGYIPESPETSFMSPIALGSMGLSHNSGSYVMNMGAPGAMGVGVSLQGNVTESGSPSSRMIPLLRNGPIFFGNGSYQAIGATNNDGLAERGRSRRIEYSVNQIDNNRQYQLDLDKIISGEDTRTTLMIKNIPNKYTSKMLLEAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMLSPSHIIPFYKA 759
BLAST of DCAR_021311 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: F6HNY9 ((Uncharacterized protein {ECO:0000313|EMBL:CCB56395.1}))
HSP 1 Score: 923.309 bits (2385), Expect = 0.000e+0
Identity = 482/694 (69.45%), Postives = 560/694 (80.69%), Query Frame = 0
Match: F6HNY9 ((Uncharacterized protein {ECO:0000313|EMBL:CCB56395.1}))
HSP 1 Score: 923.309 bits (2385), Expect = 0.000e+0
Identity = 482/694 (69.45%), Postives = 560/694 (80.69%), Query Frame = 0
Query: 16 HSGLSVDDDFPPLSKIRSGAEGKSAV--TESNAVGNLLPGNEDDLLAGVMDDFDLSDLPTQLEDLEDELFDSGGGMEMDFDFQDSLLTGVSSLSMSDGVH-NGIGSHSLTNSGGTVAGEHPYGEHPSRTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRNIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEEALKALNRIDIAGKRIKLEPSRPGGARRNLLQQLSQELDQDETWTFRNQVGSPL-NSPPGNWTHFGSPVS---VQGFNLSPGWETLSPVNSNQVKIHGLASILPARLSNPVKIAPIGKESKE---------HGRSLQGVAYQHSHSFPDQKPSASPIAVSSLGDSSSNPSGVGTLSGPQFLWGSPTTNSMSSNTSAWPTSSTGVSFTSNGQGKGHLFPSRPSTSIGSHHYHHVGSAPTGMPLDRHISYLPESPEISFLSPVAYG--GLNRNNRSYMTNI-PLAGLGIGIAPLGNMFENGSPSSRMMSIPRNGPIYFGNGSYQGTGLI-HDGLAERARARQIEYAGNQLENKKQYQLELDKIMSGEDRRTTLMIKNIPNKYTSKMLLLAIDENHGGTYDFLYLPIDFKNKCNVGYAFINMISPSHIISFYQV 689
H G SVDD P L+K++ E K + + NA+G+LLP +ED+LLAG+MDDFDLS LPTQ+EDLED+LF SGGGME+DFD G+S LS+SDGV NGIG + L N TVAGEHPYGEHPSRTLFVRNINSNVEDSELK+LFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLR IFGAYGEVKEIRETPHKRHHKFIE+YDVRAAE AL+ALNR DIAGKRIKLEPSRPGGARRNL+QQLSQEL+QDE +FR+ VGSP+ NSPPGNW F SPV +Q ++ SPG +SP+NSN + GLASILP +SN VKIAPIGK+ + + QG AYQ SHS P+QK SASP +SSLG+S+SN SG+GTLSGPQFLWGSPT S N+SAWPTSS G F S+GQG+G + ++ + +GSH +HHVGSAP+G+PLDRH Y PESPE SF+SPV +G GL+R+N ++ N+ A + G+A GNM ENG PS RM+S+PR+GP + GNG+Y +G+ ++ LAER R R++E +GNQ+++KKQYQL+LDKI+SGED RTTLMIKNIPNKYTSKMLL AIDENH GTYDFLYLPIDFKNKCNVGYAFINM+SPSHII FY+
Sbjct: 72 HCGHSVDDGSPSLNKLQQDEESKDPLEDVDLNAIGSLLPDDEDELLAGIMDDFDLSGLPTQVEDLEDDLFGSGGGMELDFDI------GISKLSLSDGVAGNGIGHYGLPNGVATVAGEHPYGEHPSRTLFVRNINSNVEDSELKTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDEARSFRHHVGSPVTNSPPGNWAAF-SPVEHNPLQAYSHSPGLGNISPINSNHLP--GLASILPPHISNSVKIAPIGKDQGRVNHVNQVFTNAKPTQGAAYQISHSVPEQKLSASPGPISSLGESNSNSSGIGTLSGPQFLWGSPTPYSERPNSSAWPTSSVGHPFVSSGQGQGFPYSNQHGSFLGSHQHHHVGSAPSGVPLDRHFGYFPESPETSFMSPVTFGGMGLSRSNGNFAMNVGARAAINTGVALPGNMTENGLPSFRMLSLPRHGPPFLGNGTYPVSGVTSNEVLAERGRTRRVENSGNQIDSKKQYQLDLDKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIIPFYEA 756
BLAST of DCAR_021311 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061DK38 ((MEI2-like protein 5 isoform 4 {ECO:0000313|EMBL:EOX93010.1}))
HSP 1 Score: 920.228 bits (2377), Expect = 0.000e+0
Identity = 485/705 (68.79%), Postives = 570/705 (80.85%), Query Frame = 0
Match: A0A061DK38 ((MEI2-like protein 5 isoform 4 {ECO:0000313|EMBL:EOX93010.1}))
HSP 1 Score: 920.228 bits (2377), Expect = 0.000e+0
Identity = 485/705 (68.79%), Postives = 570/705 (80.85%), Query Frame = 0
Query: 14 IGHSGLSVDDDFPPLSKIRSGAEGKSAV--TESNAVGNLLPGNEDDLLAGVMDDFDLSDLPTQLEDLED-ELFDSGGGMEMDFDFQDSLLTGVSSLSMSDGV-HNGIGSHSLTNSGGTVAGEHPYGEHPSRTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRNIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEEALKALNRIDIAGKRIKLEPSRPGGARRNLLQQLSQELDQDETWTFRNQVGSPL-NSPPGNWTHFGSPVS---VQGFNLSPGWETLSPVNSNQVKIHGLASILPARLSNPVKIAPIGKESKE---------HGRSLQGVAYQHSHSFPDQKPSASPIAVSSLGDSSSNPSGVGTLSGPQFLWGSPTTNSMSSNTSAWPTSSTGVSFTSNGQGKGHLFPSRPSTSIGSHHYHHVGSAPTGMPLDRHISYLPESPEISFLSPVAYG--GLNRNNRSYMTNIPLAG-LGIGIAPLGNMFENGSPSSRMMSIPRNGPIYFGNGSYQGTGLI-HDGLAERARARQIEYAGNQLENKKQYQLELDKIMSGEDRRTTLMIKNIPNKYTSKMLLLAIDENHGGTYDFLYLPIDFKNKCNVGYAFINMISPSHIISFYQVELLLFALL 697
+ HSG SVDD+ P L K+ EGK + E+NA+GNLLP +ED+LLAG+MDDFDLS LP+QLEDLE+ ++F +GGGME+DFD Q+SL G+S++++SDGV NGIG + L N GTVAGEHPYGEHPSRTLFVRNINSNVEDSEL+SLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLD SVSNDDLR IFGAYGEVKEIRETPHKRHHKFIE+YDVRAAE AL+ALNR DIAGKRIKLEPSRPGGARRNL+QQLSQEL+QDE +FR+ VGSP+ NSPPGNW FGSPV + F+ SPG + SPVN+N + GLASILP + N KIAPIGK+ + + ++QGVAYQHS SFP+Q SASP VS+ G+S+S +GVGTL+GPQFLWGSPT S + +SAWP+ G+G + SR S+ +GS ++HHVGSAP+G+ LDRH SYLPESPE SF+SPV++ GLNR+N S + NI G +G G+ G++ ENGSPS RMMS+PR+ PI+ GNGSY G G ++GLA+R+R+R++E GNQ++NKKQYQL+LDKIMSGED RTTLMIKNIPNKYTSKMLL AIDENH GTYDFLYLPIDFKNKCNVGYAFINMISPSHI+SFYQV+ ++ L+
Sbjct: 68 VEHSGHSVDDNSPNLHKLECENEGKDPLEDAETNAIGNLLPDDEDELLAGIMDDFDLSGLPSQLEDLEEYDVFGTGGGMELDFDPQESLNIGISTMNLSDGVPANGIGHYPLPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDEARSFRHHVGSPVGNSPPGNWAQFGSPVEHNPLHAFSKSPGLGSFSPVNNNNLP--GLASILPHHVPNSPKIAPIGKDQVKTNLTNQIFTNAGAVQGVAYQHSRSFPEQDLSASPGPVSAFGESNSGSTGVGTLTGPQFLWGSPTPYSERA-SSAWPS------------GQGFPYTSRHSSFLGSSNHHHVGSAPSGVHLDRHFSYLPESPETSFMSPVSFAGVGLNRSNGSLLMNIGARGTMGAGVGLPGSVTENGSPSFRMMSMPRHSPIFLGNGSYAGQGTAGNEGLADRSRSRRVENNGNQIDNKKQYQLDLDKIMSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMISPSHIVSFYQVQPVVLLLI 757
BLAST of DCAR_021311 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438IPH9 ((Protein MEI2-like 2 {ECO:0000313|EMBL:RVW98620.1}))
HSP 1 Score: 918.687 bits (2373), Expect = 0.000e+0
Identity = 480/694 (69.16%), Postives = 558/694 (80.40%), Query Frame = 0
Match: A0A438IPH9 ((Protein MEI2-like 2 {ECO:0000313|EMBL:RVW98620.1}))
HSP 1 Score: 918.687 bits (2373), Expect = 0.000e+0
Identity = 480/694 (69.16%), Postives = 558/694 (80.40%), Query Frame = 0
Query: 16 HSGLSVDDDFPPLSKIRSGAEGKSAVTES--NAVGNLLPGNEDDLLAGVMDDFDLSDLPTQLEDLEDELFDSGGGMEMDFDFQDSLLTGVSSLSMSDGVH-NGIGSHSLTNSGGTVAGEHPYGEHPSRTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRNIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEEALKALNRIDIAGKRIKLEPSRPGGARRNLLQQLSQELDQDETWTFRNQVGSPL-NSPPGNWTHFGSPVS---VQGFNLSPGWETLSPVNSNQVKIHGLASILPARLSNPVKIAPIGKESKE---------HGRSLQGVAYQHSHSFPDQKPSASPIAVSSLGDSSSNPSGVGTLSGPQFLWGSPTTNSMSSNTSAWPTSSTGVSFTSNGQGKGHLFPSRPSTSIGSHHYHHVGSAPTGMPLDRHISYLPESPEISFLSPVAYG--GLNRNNRSYMTNI-PLAGLGIGIAPLGNMFENGSPSSRMMSIPRNGPIYFGNGSYQGTGLI-HDGLAERARARQIEYAGNQLENKKQYQLELDKIMSGEDRRTTLMIKNIPNKYTSKMLLLAIDENHGGTYDFLYLPIDFKNKCNVGYAFINMISPSHIISFYQV 689
H G SVDD P L+K++ E K + + NA+G+LLP +ED+LLAG+MDDFDLS LPTQ+EDLED+LF SGGGME+DFD G+S LS+SDGV NGIG + L N TVAGEHPYGEHPSRTLFVRNINSNVEDSELK+LFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLR IFGAYGEVKEIRETPHKRHHKFIE+YDVRAAE AL+ALNR DIAGKRIKLEPSRPGGARRNL+QQLSQEL+QDE +FR+ VGSP+ NSPPGNW F SPV +Q ++ SPG +SP+NSN + GLASILP +SN VKIAPIGK+ + + QG AYQ SHS P+QK SASP +SSLG+S+SN SG+GTLSGPQFLWGSPT S N+SAWPTSS G F S+GQG+G + ++ + +GSH +HHVGSAP+G+PLDRH Y PESPE SF+SPV +G GL+R+N ++ N+ A + G+A GNM ENG PS RM+S+ +GP + GNG+Y +G+ ++ LAER R R++E +GNQ+++KKQYQL+LDKI+SGED RTTLMIKNIPNKYTSKMLL AIDENH GTYDFLYLPIDFKNKCNVGYAFINM+SPSHII FY+
Sbjct: 66 HCGHSVDDGSPSLNKLQQDEESKDPLEDVDLNAIGSLLPDDEDELLAGIMDDFDLSGLPTQVEDLEDDLFGSGGGMELDFDI------GISKLSLSDGVAGNGIGHYGLPNGVATVAGEHPYGEHPSRTLFVRNINSNVEDSELKTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDEARSFRHHVGSPVTNSPPGNWAAF-SPVEHNPLQAYSHSPGLGNISPINSNHLP--GLASILPPHMSNSVKIAPIGKDQGRVNHVNQVFTNAKPTQGAAYQISHSVPEQKLSASPGPISSLGESNSNSSGIGTLSGPQFLWGSPTPYSERPNSSAWPTSSVGHPFVSSGQGQGFPYSNQHGSFLGSHQHHHVGSAPSGVPLDRHFGYFPESPETSFMSPVTFGGMGLSRSNGNFAMNVGARAAINTGVALPGNMTENGLPSFRMLSLLTHGPPFLGNGTYPVSGVTSNEVLAERGRTRRVENSGNQIDSKKQYQLDLDKIISGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMVSPSHIIPFYEA 750
BLAST of DCAR_021311 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061DKN9 ((MEI2-like protein 5 isoform 1 {ECO:0000313|EMBL:EOX93007.1}))
HSP 1 Score: 916.376 bits (2367), Expect = 0.000e+0
Identity = 483/697 (69.30%), Postives = 564/697 (80.92%), Query Frame = 0
Match: A0A061DKN9 ((MEI2-like protein 5 isoform 1 {ECO:0000313|EMBL:EOX93007.1}))
HSP 1 Score: 916.376 bits (2367), Expect = 0.000e+0
Identity = 483/697 (69.30%), Postives = 564/697 (80.92%), Query Frame = 0
Query: 14 IGHSGLSVDDDFPPLSKIRSGAEGKSAV--TESNAVGNLLPGNEDDLLAGVMDDFDLSDLPTQLEDLED-ELFDSGGGMEMDFDFQDSLLTGVSSLSMSDGV-HNGIGSHSLTNSGGTVAGEHPYGEHPSRTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRNIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEEALKALNRIDIAGKRIKLEPSRPGGARRNLLQQLSQELDQDETWTFRNQVGSPL-NSPPGNWTHFGSPVS---VQGFNLSPGWETLSPVNSNQVKIHGLASILPARLSNPVKIAPIGKESKE---------HGRSLQGVAYQHSHSFPDQKPSASPIAVSSLGDSSSNPSGVGTLSGPQFLWGSPTTNSMSSNTSAWPTSSTGVSFTSNGQGKGHLFPSRPSTSIGSHHYHHVGSAPTGMPLDRHISYLPESPEISFLSPVAYG--GLNRNNRSYMTNIPLAG-LGIGIAPLGNMFENGSPSSRMMSIPRNGPIYFGNGSYQGTGLI-HDGLAERARARQIEYAGNQLENKKQYQLELDKIMSGEDRRTTLMIKNIPNKYTSKMLLLAIDENHGGTYDFLYLPIDFKNKCNVGYAFINMISPSHIISFYQV 689
+ HSG SVDD+ P L K+ EGK + E+NA+GNLLP +ED+LLAG+MDDFDLS LP+QLEDLE+ ++F +GGGME+DFD Q+SL G+S++++SDGV NGIG + L N GTVAGEHPYGEHPSRTLFVRNINSNVEDSEL+SLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLD SVSNDDLR IFGAYGEVKEIRETPHKRHHKFIE+YDVRAAE AL+ALNR DIAGKRIKLEPSRPGGARRNL+QQLSQEL+QDE +FR+ VGSP+ NSPPGNW FGSPV + F+ SPG + SPVN+N + GLASILP + N KIAPIGK+ + + ++QGVAYQHS SFP+Q SASP VS+ G+S+S +GVGTL+GPQFLWGSPT S + +SAWP+ G+G + SR S+ +GS ++HHVGSAP+G+ LDRH SYLPESPE SF+SPV++ GLNR+N S + NI G +G G+ G++ ENGSPS RMMS+PR+ PI+ GNGSY G G ++GLA+R+R+R++E GNQ++NKKQYQL+LDKIMSGED RTTLMIKNIPNKYTSKMLL AIDENH GTYDFLYLPIDFKNKCNVGYAFINMISPSHI+SFYQ
Sbjct: 68 VEHSGHSVDDNSPNLHKLECENEGKDPLEDAETNAIGNLLPDDEDELLAGIMDDFDLSGLPSQLEDLEEYDVFGTGGGMELDFDPQESLNIGISTMNLSDGVPANGIGHYPLPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDEARSFRHHVGSPVGNSPPGNWAQFGSPVEHNPLHAFSKSPGLGSFSPVNNNNLP--GLASILPHHVPNSPKIAPIGKDQVKTNLTNQIFTNAGAVQGVAYQHSRSFPEQDLSASPGPVSAFGESNSGSTGVGTLTGPQFLWGSPTPYSERA-SSAWPS------------GQGFPYTSRHSSFLGSSNHHHVGSAPSGVHLDRHFSYLPESPETSFMSPVSFAGVGLNRSNGSLLMNIGARGTMGAGVGLPGSVTENGSPSFRMMSMPRHSPIFLGNGSYAGQGTAGNEGLADRSRSRRVENNGNQIDNKKQYQLDLDKIMSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMISPSHIVSFYQA 749
BLAST of DCAR_021311 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061DSP6 ((MEI2-like protein 5 isoform 2 {ECO:0000313|EMBL:EOX93008.1}))
HSP 1 Score: 916.376 bits (2367), Expect = 0.000e+0
Identity = 483/697 (69.30%), Postives = 564/697 (80.92%), Query Frame = 0
Match: A0A061DSP6 ((MEI2-like protein 5 isoform 2 {ECO:0000313|EMBL:EOX93008.1}))
HSP 1 Score: 916.376 bits (2367), Expect = 0.000e+0
Identity = 483/697 (69.30%), Postives = 564/697 (80.92%), Query Frame = 0
Query: 14 IGHSGLSVDDDFPPLSKIRSGAEGKSAV--TESNAVGNLLPGNEDDLLAGVMDDFDLSDLPTQLEDLED-ELFDSGGGMEMDFDFQDSLLTGVSSLSMSDGV-HNGIGSHSLTNSGGTVAGEHPYGEHPSRTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRNIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEEALKALNRIDIAGKRIKLEPSRPGGARRNLLQQLSQELDQDETWTFRNQVGSPL-NSPPGNWTHFGSPVS---VQGFNLSPGWETLSPVNSNQVKIHGLASILPARLSNPVKIAPIGKESKE---------HGRSLQGVAYQHSHSFPDQKPSASPIAVSSLGDSSSNPSGVGTLSGPQFLWGSPTTNSMSSNTSAWPTSSTGVSFTSNGQGKGHLFPSRPSTSIGSHHYHHVGSAPTGMPLDRHISYLPESPEISFLSPVAYG--GLNRNNRSYMTNIPLAG-LGIGIAPLGNMFENGSPSSRMMSIPRNGPIYFGNGSYQGTGLI-HDGLAERARARQIEYAGNQLENKKQYQLELDKIMSGEDRRTTLMIKNIPNKYTSKMLLLAIDENHGGTYDFLYLPIDFKNKCNVGYAFINMISPSHIISFYQV 689
+ HSG SVDD+ P L K+ EGK + E+NA+GNLLP +ED+LLAG+MDDFDLS LP+QLEDLE+ ++F +GGGME+DFD Q+SL G+S++++SDGV NGIG + L N GTVAGEHPYGEHPSRTLFVRNINSNVEDSEL+SLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLD SVSNDDLR IFGAYGEVKEIRETPHKRHHKFIE+YDVRAAE AL+ALNR DIAGKRIKLEPSRPGGARRNL+QQLSQEL+QDE +FR+ VGSP+ NSPPGNW FGSPV + F+ SPG + SPVN+N + GLASILP + N KIAPIGK+ + + ++QGVAYQHS SFP+Q SASP VS+ G+S+S +GVGTL+GPQFLWGSPT S + +SAWP+ G+G + SR S+ +GS ++HHVGSAP+G+ LDRH SYLPESPE SF+SPV++ GLNR+N S + NI G +G G+ G++ ENGSPS RMMS+PR+ PI+ GNGSY G G ++GLA+R+R+R++E GNQ++NKKQYQL+LDKIMSGED RTTLMIKNIPNKYTSKMLL AIDENH GTYDFLYLPIDFKNKCNVGYAFINMISPSHI+SFYQ
Sbjct: 68 VEHSGHSVDDNSPNLHKLECENEGKDPLEDAETNAIGNLLPDDEDELLAGIMDDFDLSGLPSQLEDLEEYDVFGTGGGMELDFDPQESLNIGISTMNLSDGVPANGIGHYPLPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALRALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQELEQDEARSFRHHVGSPVGNSPPGNWAQFGSPVEHNPLHAFSKSPGLGSFSPVNNNNLP--GLASILPHHVPNSPKIAPIGKDQVKTNLTNQIFTNAGAVQGVAYQHSRSFPEQDLSASPGPVSAFGESNSGSTGVGTLTGPQFLWGSPTPYSERA-SSAWPS------------GQGFPYTSRHSSFLGSSNHHHVGSAPSGVHLDRHFSYLPESPETSFMSPVSFAGVGLNRSNGSLLMNIGARGTMGAGVGLPGSVTENGSPSFRMMSMPRHSPIFLGNGSYAGQGTAGNEGLADRSRSRRVENNGNQIDNKKQYQLDLDKIMSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMISPSHIVSFYQA 749
BLAST of DCAR_021311 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7H995 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5949155.1}))
HSP 1 Score: 914.835 bits (2363), Expect = 0.000e+0
Identity = 472/674 (70.03%), Postives = 542/674 (80.42%), Query Frame = 0
Match: A0A7J7H995 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5949155.1}))
HSP 1 Score: 914.835 bits (2363), Expect = 0.000e+0
Identity = 472/674 (70.03%), Postives = 542/674 (80.42%), Query Frame = 0
Query: 16 HSGLSVDDDFPPLSKIRSGAEGKSAV--TESNAVGNLLPGNEDDLLAGVMDDFDLSDLPTQLEDLEDE-LFDSGGGMEMDFDFQDSLLTGVSSLSMSDGVH-NGIGSHSLTNSGGTVAGEHPYGEHPSRTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRNIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEEALKALNRIDIAGKRIKLEPSRPGGARRNLLQQLSQELDQDETWTFRNQVGSPL-NSPPGNWTHFGSPVS---VQGFNLSPGWETLSPVNSNQVKIHGLASILPARLSNPVKIAPIGKESKEHGR------------SLQGVAYQHSHSFPDQKPSASPIAVSSLGDSSSNPSGVGTLSGPQFLWGSPTTNSMSSNTSAWPTSSTGVSFTSNGQGKGHLFPSRPSTSIGSHHYHHVGSAPTGMPLDRHISYLPESPEISFLSPVAYG--GLNRNNRSYMTNI-PLAGLGIGIAPLGNMFENGSPSSRMMSIPRNGPIYFGNGSYQGTGL-IHDGLAERARARQIEYAGNQLENKKQYQLELDKIMSGEDRRTTLMIKNIPNKYTSKMLLLAIDENHGGTYDFLYLPIDFK 665
H G SVDD FP L K+ + K + E +A+G LLPG+E++LLAG+MDDFDLS LPTQLEDLED+ F SGGGME+DFD Q+SL +S LSMSDGV NGIG + L N TVAGEHPYGEHPSRTLFVRNINSNVEDSEL SLFEQYGDIR LYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLR IFG YGEVKEIRETPHKRHHKFIE+YDVRAAE ALKALNR DIAGKRIKLEPSRPGGARRNL+QQL+QEL+QDE +FR+ VGSP+ NSPPGNW HFGSPV +QGF+ SP LSP+ SN + GLASIL +SNP KIAPIG K+ GR S QGV YQ SHSFP+QK SASP +SS G+S+SN SG+GTLSGPQFLWGSPT S +++SAWPTSS G F + QG+G+ + ++ + +GSHH HHVGSAP+G+PLDRH Y PESPE SF++ VA+G GLNR SY+ N+ + +G+A GNM E+GSPSSRMMS+PRNGP++FGNG+ QG G+ I++GL ER R+R++EY+ NQ++++KQYQL+LDKI SGED RTTLMIKNIPNKYTSKMLL AIDENHGGTYDFLYLPIDFK
Sbjct: 65 HCGQSVDDGFPTLKKLHQEDDSKDPLEDVEPSAIGTLLPGDENELLAGIMDDFDLSGLPTQLEDLEDDDFFGSGGGMELDFDSQESLNIAMSKLSMSDGVSVNGIGHYGLPNGVATVAGEHPYGEHPSRTLFVRNINSNVEDSELVSLFEQYGDIRNLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDASVSNDDLRQIFGTYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLTQELEQDEARSFRHPVGSPVNNSPPGNWPHFGSPVEHNPLQGFSQSPVLGPLSPIKSNHMP--GLASILSPHVSNPAKIAPIG---KDQGRISHVNQVIGNVNSTQGVGYQLSHSFPEQKLSASPGPMSSFGESNSNSSGIGTLSGPQFLWGSPTPYSEHTSSSAWPTSSVGNPFAPSTQGQGYPYSNQHGSFLGSHHLHHVGSAPSGVPLDRHFGYFPESPETSFMNHVAFGGMGLNRKTASYVMNMGARPAMSVGVALPGNMSESGSPSSRMMSLPRNGPLFFGNGTLQGIGVTINEGLLERGRSRRVEYSVNQIDSRKQYQLDLDKIKSGEDTRTTLMIKNIPNKYTSKMLLAAIDENHGGTYDFLYLPIDFK 733
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7AHI7 | E-Value: 0.000e+0, PID: 71.04 | (Uncharacterized protein {ECO:0000313|EMBL:MPA5624... [more] |
| A0A4S4EL69 | E-Value: 0.000e+0, PID: 70.44 | (Uncharacterized protein {ECO:0000313|EMBL:THG1683... [more] |
| A0A5J5A7H4 | E-Value: 0.000e+0, PID: 70.94 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8526... [more] |
| A0A5J5A877 | E-Value: 0.000e+0, PID: 71.18 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8526... [more] |
| F6HNY9 | E-Value: 0.000e+0, PID: 69.45 | (Uncharacterized protein {ECO:0000313|EMBL:CCB5639... [more] |
| A0A061DK38 | E-Value: 0.000e+0, PID: 68.79 | (MEI2-like protein 5 isoform 4 {ECO:0000313|EMBL:E... [more] |
| A0A438IPH9 | E-Value: 0.000e+0, PID: 69.16 | (Protein MEI2-like 2 {ECO:0000313|EMBL:RVW98620.1}... [more] |
| A0A061DKN9 | E-Value: 0.000e+0, PID: 69.30 | (MEI2-like protein 5 isoform 1 {ECO:0000313|EMBL:E... [more] |
| A0A061DSP6 | E-Value: 0.000e+0, PID: 69.30 | (MEI2-like protein 5 isoform 2 {ECO:0000313|EMBL:E... [more] |
| A0A7J7H995 | E-Value: 0.000e+0, PID: 70.03 | (Uncharacterized protein {ECO:0000313|EMBL:KAF5949... [more] |
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back to topAnalysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions. | |
For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins. Data from this analysis can be viewed in JBrowse here. |