DCAR_021244

Resource Type: 
Polypeptide
Name: 
DCAR_021244
Identifier: 
DCAR_021244.mRNA-protein
Sequence: 
MSSVCVSLPLPAKTPLKPININPNFKPPNFDDNLIHLANTAQIHKAMHLI
TTHQHKLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIM
LNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESV
CMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEAD
LCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSG
DALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLS
TDVCVGCSLLDMYAKSGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGG
FDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKL
GFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKN
LNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAASVEIGKYAAEMILKQDP
SDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSWIETGNTVH
KFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQY
LFQHSEKIAVAFGLISTAKPKPIRIFKNLRICGDCHTAMKYISLATGRDI
VVRDSNRFHHFVDGSCSCNEYW*
Sequence Length: 
673
Sequence Checksum: 
24f23eb0117cc4785d9d3f5aacb48862
View location in JBrowse: 
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, DCAR_021244, derives from mRNA, DCAR_021244.
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Blast Results: 
The following BLAST results are available for this feature:
BLAST of DCAR_021244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2021-12-09
Analysis Name: DCAR peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 20
BLAST of DCAR_021244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6LCB1 (DYW_deaminase domain-containing protein {ECO:0000259|Pfam:PF14432})

HSP 1 Score: 695.271 bits (1793), Expect = 0.000e+0
Identity = 373/698 (53.44%), Postives = 463/698 (66.33%), Query Frame = 0
 
Query:   27 PPNFDDNLIHLANTAQIHKAMHLITTHQHKLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDR--RDLVSWSAIISGFAHNGMERESVCMFVDMI-KSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSGGS--LIDSRNVFNRMSEQNIMSWTAMITGYVLS-GGFDREAIEMYIKMI-ESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTY---ASLLSGAASVEIGKYAAEMILKQD-PSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSW--IETGNTVHKFYVG-------------------------DTSHPQARD--------------IYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQHSEKIAVAFGLISTAKPKPIRIFKNLRICGDCHTAMKYISLATGRDIVVRDSNRFHHFVDGSCSCNEYW 672
            PPNF      +         + L+   Q     DL T S  LKSCIRTRNF LGKLLH  LI SG+  D   ++LNSLITLYSKSGD V AK +FDS+G    RDLVSWSAIIS F HNGME +++  FV M+    E PN FCFS  I ACC+R N   G  IFGFVIKTGYFE+D+CVGCALIDLFAKG  D++ AR VFD+MPERN+VTWTL+ITRYAQMG   D +ELF  M+   F+ DRFT SSV+S CAELG++ VG+Q+HS V+K GL  DV +GCSL+DMYAK   +  + D+R VF RM   N+MSWTA+ITGYV S GG D  AIE+Y KMI +  VLPN  T+SS+LKACG+L+  + G+QI++ AVK G  SVNCVGNSL+SMYARSG++EDAQKAFE L EKNL+SYN ++D YAK  +SDEAF +FN+ ++T++ VD+FT+    S  +   +V  G+     +LK    S+      L ++Y+     +    +   M++RNV+     SW  I  G   H    G                           SH    D              IY +LDQL + IK+LGY+PDT+FVLH + E++KE+YL QHSEKIAVAFGLIS +K KPIR+FKNLR+CGDCHTAMKYIS+A GR+IVVRDSNRFHHF +GSCSCN+YW
Sbjct:    7 PPNFTHKSTTIPIPFPFKPNLRLMGIQQ---PLDLTTSSLFLKSCIRTRNFQLGKLLHAKLIRSGIKLD--AVILNSLITLYSKSGDWVAAKTIFDSMGHHHLRDLVSWSAIISCFTHNGMESQALLTFVQMLLMHEEYPNHFCFSAAIQACCNRDNAPTGEAIFGFVIKTGYFESDVCVGCALIDLFAKGFQDLESARKVFDKMPERNSVTWTLLITRYAQMGLHEDGIELFSRMLCCSFMPDRFTLSSVVSACAELGFISVGQQMHSWVIKLGLCMDVFIGCSLVDMYAKCATTEPMEDARKVFERMPNHNVMSWTAIITGYVQSGGGLDATAIELYCKMITKGDVLPNHFTYSSILKACGSLSSIEIGKQIHNQAVKSGLVSVNCVGNSLISMYARSGNMEDAQKAFEFLLEKNLVSYNAIMDGYAKQTSSDEAFKMFNKFKETQLEVDSFTFASLLSAAASLGAVGKGEEMHARLLKSGFHSNQRVCNALISMYSRCGDIEAAARVFNKMEERNVI-----SWTSIIAGFAKHGLARGALGVFDQMLEAGVKPNEVTYIAVLSACSHAGLVDEGLKHFSSMYSEHKIYKELDQLVIDIKRLGYLPDTDFVLHELDEKEKERYLVQHSEKIAVAFGLISVSKTKPIRVFKNLRVCGDCHTAMKYISVARGREIVVRDSNRFHHFKNGSCSCNDYW 694    
BLAST of DCAR_021244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5A7QPB0 ((Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:GER46702.1}))

HSP 1 Score: 687.182 bits (1772), Expect = 0.000e+0
Identity = 363/689 (52.69%), Postives = 472/689 (68.51%), Query Frame = 0
 
Query:    4 VCVSLPLPAKTP-LKPININPNFKPPN--------FDDNLIHLANTAQIHKAMH---LITTHQHKLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSG--GSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKM-IESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIE-DTEIGVDAFTYASLLSGAASV-EIGK---YAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSWIETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVE-EQKEQYLFQHSEKIAVAFGLISTAKPKPIRIFKNLRICGDCHTAMKYISLATGRDIVVRDSNRFHHFVDGSCSCNEY 671
            + +SLPLP  +P +KP   NP+ +P N            LI  A+  ++ +A+    L+++    L PDL +YS LL+SCIRTRN + G+ +H+ L  SGL  D   ++LNSLI+LYSK GD   A+ +F S+G  RDLVSWSA+IS +AH  +  +++ MF++M++ GERPN+FCFS  I AC +R    VGL IFGF++KTG+F +D+CVGCALIDLFAKG  D+  AR VFD+MP RN V+WTLMITR+ QMG   D++ LFL M+E GFV D FT SS +S C+ELG L VG QLH+ V+K+G  +DVCVGC L+DMY+K    GS+ +SR  F+RM   N+MS TA+ITGYV +GG D EAIE+Y +M I+  V PN +TF+SLLKACGNL + K GEQIY +AVKLG S VNCVGNSL+SMY +   +E+A+KAFE LFEKNL+SYN  VD YA+  +SD  F++FN+IE ++++ VDAFT+ASLLSGAAS+  IGK     A +I     SD      L ++Y      +    I K M  RNV+     SW                      I  +LD++ V+IKK+GY+ DTNFVLH V E EQKE+ LF HSEKIA+A+GLI T K K IRIFKNLR+CGDCH AMKY+S+A+GR+IVVRDSNRFHH  DG CSC++Y
Sbjct: 1078 ISLSLPLPTASPSIKPNRKNPSARPHNAAVTVFESLKSRLIRHADAGRLDEALSTLDLMSSASAGLAPDLTSYSVLLRSCIRTRNLETGRAVHSKLTESGLELD--AVVLNSLISLYSKCGDRKKAEEIFSSMGGLRDLVSWSAMISCYAHGKLNSQAIAMFLEMVELGERPNEFCFSAAIRACSNRKFAAVGLVIFGFLMKTGHFGSDVCVGCALIDLFAKGFGDLDSARKVFDKMPVRNLVSWTLMITRFTQMGSPLDSILLFLDMIEVGFVPDSFTLSSCLSACSELGLLAVGLQLHTWVIKNGFLSDVCVGCGLVDMYSKCAVNGSMDESRKTFDRMQGHNVMSLTALITGYVQNGGRDYEAIELYCQMIIDGEVKPNHLTFASLLKACGNLFNPKIGEQIYGHAVKLGLSPVNCVGNSLISMYTKCDQMEEARKAFEFLFEKNLVSYNTSVDGYARTSDSDGDFELFNEIEKNSDVRVDAFTFASLLSGAASIGAIGKGEQIHARLIKSGFESDLNISNALVSMYTKCGNVEAGFRIFKEMGSRNVI-----SWTS--------------------IITELDRMVVEIKKMGYVHDTNFVLHEVEEQEQKERNLFLHSEKIALAYGLIRTGKGKTIRIFKNLRVCGDCHNAMKYVSVASGREIVVRDSNRFHHIKDGVCSCDDY 1739    

HSP 2 Score: 461.84 bits (1187), Expect = 3.937e-142
Identity = 264/597 (44.22%), Postives = 369/597 (61.81%), Query Frame = 0
 
Query:    6 VSLPLPAKTP-LKPININPNFKPPNFD---------------DNLIHLANTAQIHKAMHLI-------TTHQHKLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSG--GSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMI-ESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIE-DTEIGVDAFTYASLLSGAASV-EIGK---YAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSW--IETGNTVHKFYVGDTSHPQARDIYGQL 569
            +SLPLP  +P +KP   +PN +  N                    I  A+  ++ +A+  +               PDL  Y  LL+SCI TRN ++G+ +H+ L  SGL  D  V  LNSLI+LYSK GDL  A+ +F S+G   D  SWSA+IS +       +++ +F+ M++ GER ++ CFS  I AC +R    VGL IFG V+KTG+F AD+ +G ALIDLFAKG  D+  AR VFD+MPERN ++WTLMITR+ QMGF  D++ LFL M+  GF+ DRFT SS +S C+ELG + VG+QLH+ V+K+G   D C+G  L++MY+K    GS+ +SR  F+RM + ++MSW  +ITGYV SGG D EA+E+Y +MI +  V P+  TFSSLLKAC NL++ K GEQIY +AVKLG S VN V NSL+SMY +   +EDA++AFE+LFEK+L+SYN ++  YA+NL+  +AF++FNQ E ++++G DAFT+ SLLSG AS+  IGK     A +I     SD      L ++Y          +I K M  ++V+     SW  I +G   H F        +A ++Y Q+
Sbjct:    4 LSLPLPTASPSIKP---DPNSRRKNLSAWSHNPGVAGFESLRSRTIRHADAGRLGQALSTLDLMSIAGPGPGPGPGPDLTGYYDLLRSCIHTRNLEMGRAIHSKLTESGLELDAAV--LNSLISLYSKCGDLRKAEEIFSSMGGLWDSASWSAMISCYEKGNRNSQAIAVFLKMLELGERSDEVCFSAAIRACSNRKFAAVGLVIFGLVMKTGHFGADVRMGSALIDLFAKGFGDLDSARKVFDKMPERNPISWTLMITRFKQMGFPRDSILLFLDMIYAGFLPDRFTLSSCLSACSELGLVAVGRQLHTWVIKNGFLWDACLGRGLVEMYSKCAINGSMDESRETFDRMQDHSLMSWNVIITGYVQSGGHDYEALELYCRMITDGEVKPDHYTFSSLLKACRNLSNLKLGEQIYGHAVKLGLSPVNSVVNSLISMYTKCDRMEDARRAFELLFEKDLVSYNTMICGYARNLDFGKAFELFNQFESNSDVGADAFTFTSLLSGVASIGAIGKGEQIHARLIKSGMDSDICISNALVSMYTRCGNVKAGYQIFKEMGSQDVI-----SWTSIISGFANHGF------AGKASELYKQM 584    

HSP 3 Score: 398.667 bits (1023), Expect = 2.600e-119
Identity = 201/403 (49.88%), Postives = 279/403 (69.23%), Query Frame = 0
 
Query:   34 LIHLANTAQIHKAMH-LITTHQHKLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSG--GSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMI-ESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEIL 432
            LIH A+   + +A+  L        +PDL +YS LL+ CIRTRN + G+ +H+ LI SGL  D   ++LNSLI+LYSK GD   A+ +F S+G  R+LVSW ++I  + H  +  +++ MF+ M++ GERP++ CFS  I AC ++    VGL +FG V+KT +F AD  +GCALIDLF KG  D+  AR VFD+MP R+ +TWTLMITR+ QMG   D++ LFL M+  GFV D FT S  +S C+ELG L VG+QLH+  +K+GL  ++ VGC L+DMY+K    GS+ +SR +F+RM + ++MSWTA+ITGYV SGG D EA E+Y +MI E  V P+  TFSSLLKAC NL + + G+QIY +AVKLG S+VN VG SL S+Y++   I++A+K FE++
Sbjct:  663 LIHHADAGSLGEALSTLDLMSSAGASPDLTSYSALLQYCIRTRNLETGRAVHSKLIESGLELD--AVVLNSLISLYSKCGDRTKAEEIFSSMGGLRNLVSWRSMILCYEHGNLNSQAISMFLQMVELGERPDELCFSAAIRACSNQEFAAVGLVMFGLVMKTAHFGADARLGCALIDLFTKGFGDLDSARKVFDKMPVRDLITWTLMITRFKQMGSPRDSILLFLDMIYAGFVPDWFTLSCCLSACSELGLLAVGRQLHTWAIKNGLLCNIYVGCGLVDMYSKCAVNGSMDESRKIFDRMQDHDVMSWTAIITGYVQSGGHDYEAFELYCRMITEGEVKPDHFTFSSLLKACRNLFNLRLGKQIYGHAVKLGLSNVNDVGTSLSSVYSKCDRIKEARKTFELV 1063    

HSP 4 Score: 202.216 bits (513), Expect = 7.371e-52
Identity = 131/414 (31.64%), Postives = 235/414 (56.76%), Query Frame = 0
 
Query:   64 YSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKS-GDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGL--SDMKLARVVFDRMPERNAVTWTLMITRYAQMG-FSGDALELFLSMVENGFV-ADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKM-IESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVD 471
            +S  +++C   +   +G ++   ++ +G  F   V M ++LI L++K  GDL +A+ +FD + +R + +SW+ +I+ F   G  R+S+ +F+DMI +G  P++F  S  + AC   G V VG  +  +VIK G+   D C+G  L+++++K      M  +R  FDRM + + ++W ++IT Y Q G    +ALEL+  M+ +G V  D +TFSS++  C  L  L +G+Q++   VK GLS    V  SL+ MY K    + D+R  F  + E++++S+  MI GY  +  F + A E++ +    S V  +  TF+SLL    ++     GEQI++  +K G  S  C+ N+LVSMY R G+++   + F+ +  +++IS+  ++  +A +  + +A +++ Q+ D  +  D
Sbjct:  184 FSAAIRACSNRKFAAVGLVIFGLVMKTGH-FGADVRMGSALIDLFAKGFGDLDSARKVFDKMPER-NPISWTLMITRFKQMGFPRDSILLFLDMIYAGFLPDRFTLSSCLSACSELGLVAVGRQLHTWVIKNGFL-WDACLGRGLVEMYSKCAINGSMDESRETFDRMQDHSLMSWNVIITGYVQSGGHDYEALELYCRMITDGEVKPDHYTFSSLLKACRNLSNLKLGEQIYGHAVKLGLSPVNSVVNSLISMYTKCD-RMEDARRAFELLFEKDLVSYNTMICGYARNLDFGK-AFELFNQFESNSDVGADAFTFTSLLSGVASIGAIGKGEQIHARLIKSGMDSDICISNALVSMYTRCGNVKAGYQIFKEMGSQDVISWTSIISGFANHGFAGKASELYKQMLDCGVTPD 592    

HSP 5 Score: 157.532 bits (397), Expect = 2.987e-37
Identity = 112/382 (29.32%), Postives = 201/382 (52.62%), Query Frame = 0
 
Query:  156 MIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPE-RNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSG-LSTDVCVGCSLLDMYAKSGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYAR---SGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSD-EAFDIF-NQIEDTEIGVDAFTYASLLSGAA---SVEIGKYAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRK 527
            M  +G  P+   +S ++  C    N++ G  +   +I++G  E D  V  +LI L++K   D   A  +F  M   RN V+W  MI  Y     +  A+ +FL MVE G   D   FS+ I  C+   +  VG  +  LV+K+     D  +GC+L+D++ K  G L  +R VF++M  +++++WT MIT +   G   R++I +++ MI +  +P+  T S  L AC  L     G Q+++ A+K G      VG  LV MY++   +GS+++++K F+ + + +++S+  ++  Y ++   D EAF+++   I + E+  D FT++SLL       ++ +GK      +K   S+   + + ++L +  S+ D + E RK
Sbjct:  682 MSSAGASPDLTSYSALLQYCIRTRNLETGRAVHSKLIESG-LELDAVVLNSLISLYSK-CGDRTKAEEIFSSMGGLRNLVSWRSMILCYEHGNLNSQAISMFLQMVELGERPDELCFSAAIRACSNQEFAAVGLVMFGLVMKTAHFGADARLGCALIDLFTKGFGDLDSARKVFDKMPVRDLITWTLMITRFKQMGS-PRDSILLFLDMIYAGFVPDWFTLSCCLSACSELGLLAVGRQLHTWAIKNGLLCNIYVGCGLVDMYSKCAVNGSMDESRKIFDRMQDHDVMSWTAIITGYVQSGGHDYEAFELYCRMITEGEVKPDHFTFSSLLKACRNLFNLRLGKQIYGHAVKLGLSN--VNDVGTSLSSVYSKCDRIKEARK 1058    

HSP 6 Score: 132.109 bits (331), Expect = 4.688e-29
Identity = 115/467 (24.63%), Postives = 229/467 (49.04%), Query Frame = 0
 
Query:   60 DLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGN-VDVGLGIFGFVIKTG----YFEADLC-----VGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSGGSLIDSRNVFNRMSE-QNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLG-FSSVNCVGNSLVSMYARS-GSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAASVEIGKYAAEMILKQDPSDPAAHVLLSNLY 513
            D  T+++LL           G+ +H  LI SG+  D  + + N+L+++Y++ G++     +F  +G + D++SW++IISGFA++G   ++  ++  M+  G  P++     +++ C S  N +D  L +            Y E+ +C     VG  L     K        R +   +P+    +    +  +A  G  G+AL     M   G   D  ++S+++  C     L+ G+ +HS +++SGL  D  V  SL+ +Y+K G     +  +F+ M   +N++SW +MI  Y   G  + +AI M+++M+E    P+E+ FS+ ++AC N      G  ++   +K   F +   +G +L+ ++ +  G ++ A+K F+ +  ++LI++ +++  + +  +  ++  +F  +       D FT +  LS  A  E+G  A   + +Q  +    + LL N+Y
Sbjct:  491 DAFTFTSLLSGVASIGAIGKGEQIHARLIKSGM--DSDICISNALVSMYTRCGNVKAGYQIFKEMGSQ-DVISWTSIISGFANHGFAGKASELYKQMLDCGVTPDEV----ILNECQSLENALDKKLIVLAKPALEKSIPVYIESPICNDNRAVGTMLTHELTK--------RYILHGLPDNTIYS---RLIHHADAGSLGEALSTLDLMSSAGASPDLTSYSALLQYCIRTRNLETGRAVHSKLIESGLELDAVVLNSLISLYSKCGDR-TKAEEIFSSMGGLRNLVSWRSMILCYE-HGNLNSQAISMFLQMVELGERPDELCFSAAIRACSNQEFAAVGLVMFGLVMKTAHFGADARLGCALIDLFTKGFGDLDSARKVFDKMPVRDLITWTLMITRFKQMGSPRDSILLFLDMIYAGFVPDWFTLSCCLS--ACSELGLLA---VGRQLHTWAIKNGLLCNIY 932    

HSP 7 Score: 113.62 bits (283), Expect = 3.499e-23
Identity = 113/450 (25.11%), Postives = 220/450 (48.89%), Query Frame = 0
 
Query:   56 KLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQ-----------FCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAEL-GWLDVGKQLHSLVVKSGL--STDVCVGCSLLDMYAKSGGSL---IDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFE-KNLISYNILVDAYAK-NLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAASVE 486
            ++ PD  T+S+LLK+C    N  LG+ ++ + +  GL   + V+  NSLI++Y+K   +  A+  F+ + + +DLVS++ +I G+A N          +D  K+ E  NQ           F F+ ++    S G +  G  I   +IK+G  ++D+C+  AL+ ++ +   ++K    +F  M  ++ ++WT +I+ +A  GF+G A EL+  M++ G   D      +++ C  L   LD  K+L  ++ K  L  S  V +   + +     G  L   +  R + + + +  I S    +  +  +G    EA+     M  +   P+  ++S+LL+ C    + + G  ++S  ++ G      V NSL+S+Y++ G    A++ F  +   +NL+S+  ++  Y   NLNS +A  +F Q+ +     D   +++ +   ++ E
Sbjct:  385 EVKPDHYTFSSLLKACRNLSNLKLGEQIYGHAVKLGLSPVNSVV--NSLISMYTKCDRMEDARRAFELLFE-KDLVSYNTMICGYARN----------LDFGKAFELFNQFESNSDVGADAFTFTSLLSGVASIGAIGKGEQIHARLIKSG-MDSDICISNALVSMYTR-CGNVKAGYQIFKEMGSQDVISWTSIISGFANHGFAGKASELYKQMLDCGVTPDEV----ILNECQSLENALD--KKL-IVLAKPALEKSIPVYIESPICNDNRAVGTMLTHELTKRYILHGLPDNTIYS---RLIHHADAGSLG-EALSTLDLMSSAGASPDLTSYSALLQYCIRTRNLETGRAVHSKLIESGLELDAVVLNSLISLYSKCGDRTKAEEIFSSMGGLRNLVSWRSMILCYEHGNLNS-QAISMFLQMVELGERPDELCFSAAIRACSNQE 807    
BLAST of DCAR_021244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A151QYR4 (DYW_deaminase domain-containing protein {ECO:0000259|Pfam:PF14432})

HSP 1 Score: 633.639 bits (1633), Expect = 0.000e+0
Identity = 336/682 (49.27%), Postives = 455/682 (66.72%), Query Frame = 0
 
Query:   63 TYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVG-DRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDA----------------------------QKAFEILFE-------KNLISYNILVDAYAKNLNSDEAFDIFNQ---------------------------------IEDTEIGVDAFTYASLLSGAA---SVEIGKYAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSWIETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQHSEKIAVAFGLISTAKPKPIRIFKNLRICGDCHTAMKYISLATGRDIVVRDSNRFHHFVDGSCSCNEYW 672
            T   LLK+CIR+ N +LGKLLH  L  SGL  D   ++LNSLI+LYSK G+   A  +F ++G ++RDLVSWSAIIS FA+N ME  ++  F+ M++ G  PN++CF+  I AC +   + +G  IFGFV+KTGYF++ +CVGCALID+  KG +D++ AR+VF++M ++N VTW LMITR+AQ+G  GDA++LF  M+ +G+  D FT +S++S CAE+  L  GKQLHS V++SGL +DVCVGCSL+DMYAK G S+ + R +FNRM   N+MSWTA+I+GYV  G  + EAI+++  M+   V PN  TFSS++KAC NL +   G+Q++   +KLG +S+NCVGNSL++MYAR G+ E A                             KA E+ +E        N ++Y  ++ A +     DEA+  FN                                  I       DA  + + L       + ++G++AA+MIL+++P DPA ++LLSNLYAS+ +WD V  IRK MKQ+ ++KE G SWIE  N VHKF+VGDTSHPQA+ IY +LD+LA+KIK LGY+P+T++VLH+V +EQKEQYLFQHSEKIAVAF LIST K KPIR+FKNLR+CGDCHTA+KYIS+ TGR+IVVRD+NRFHH  DG CSCN+YW
Sbjct:   40 TPHKLLKACIRSGNLELGKLLHQKLTESGLDLD--SLLLNSLISLYSKCGEWENALSIFRNMGSNKRDLVSWSAIISCFANNSMESRALVTFLRMLQHGIYPNEYCFTASIRACSNAEYLPIGRVIFGFVLKTGYFDSHVCVGCALIDMLIKGGADIESARMVFEKMQDKNVVTWNLMITRFAQLGLLGDAVDLFCRMLVSGYTPDSFTLTSLLSSCAEMELLSPGKQLHSWVIRSGLGSDVCVGCSLVDMYAKCG-SVENCRKMFNRMPRHNVMSWTALISGYV-QGRQEEEAIKLFCNMLPGHVAPNCYTFSSVIKACANLPNFGFGKQLHGQTIKLGLASINCVGNSLINMYARCGNKEAALEVFNDMGDRNVITWTSVISGFAKHGFATKALELFYEMLEIGVKPNDVTYIAVLSACSHVGLIDEAWKHFNSMHYNHGVVPRMEHYACMVDLLGRSGFLLEAIDFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPRDPATYILLSNLYASEGRWDDVAAIRKSMKQKRLIKETGYSWIEVDNQVHKFHVGDTSHPQAQKIYDELDELALKIKNLGYVPNTDYVLHDVEDEQKEQYLFQHSEKIAVAFALISTLKSKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 717    
BLAST of DCAR_021244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q961 ((Pentatricopeptide repeat-containing protein {ECO:0000313|EMBL:PSS04441.1}))

HSP 1 Score: 622.083 bits (1603), Expect = 0.000e+0
Identity = 331/606 (54.62%), Postives = 426/606 (70.30%), Query Frame = 0
 
Query:    6 VSLPLPAKTPLKPININPNFKP-----------------PNFD---DNLIHLANTAQIHKAMH-LITTHQHKLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAK--SGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAAS---VEIGKYAAEMILKQD-PSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSW--IETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYI 582
            +SL LP+ T   P    P+FKP                 PNF+   D LI LAN   +H+A+  L    Q  LTPDL TYS LLKSCIRTR F+LGKL+H  L  S L  D   +++NSLI+LYSKSGD VTA  +F  +G+RRDLVSWSA+IS FAH+GME  +V  F+DM++ GE PNQFCF+ VI AC +  N   G+ +FGFV+KTGYFE+D+CVGCAL+DLFAKG+ D+  A  VFD+MPE+N+V+WTLMITRY+Q+G   +A+ELF+ MV +G++ DRFTFSS+IS CAEL  L +G+QLHS VVK  L+ DVCVGCSL+DMYAK  + GS+++SR VF+ + + N+MSWT++ITGYV  GG D+EAIE+Y +MIE RV PN  TFSSLLKACGNL+D  AGEQIY++AVKLG +SVNCVGNS +SMYARSG +EDA+KAF+ILFEKNL+SYNI+VD YAKNL S EAF+IFNQIEDT  GVDAFT+ASLLSGAAS   V+ G+     +LK    S+ +    L ++Y+     +   ++   M+  NVV     SW  I TG   H F        +A D++ ++ +  +K  ++ YI
Sbjct:    2 ISLSLPSPTKSVP----PSFKPRNPSRQKTTSSIKTVKHPNFELFKDRLIRLANVGHLHQAISALDLMTQQGLTPDLITYSVLLKSCIRTRQFNLGKLVHTKLSESQLELDS--VLINSLISLYSKSGDWVTANDIFQDMGERRDLVSWSAMISCFAHSGMESRAVSTFIDMLEFGECPNQFCFAAVIQACSNSENARTGMVVFGFVMKTGYFESDVCVGCALVDLFAKGMGDLNSAHKVFDKMPEKNSVSWTLMITRYSQLGQPKEAMELFVDMVVSGYMPDRFTFSSIISACAELEQLSLGQQLHSQVVKYRLAFDVCVGCSLVDMYAKCATDGSMVNSRKVFDLLPDHNVMSWTSVITGYVQGGGHDKEAIELYCRMIEDRVSPNHFTFSSLLKACGNLSDPTAGEQIYTHAVKLGLASVNCVGNSHISMYARSGRMEDARKAFDILFEKNLVSYNIIVDGYAKNLYSSEAFEIFNQIEDTGSGVDAFTFASLLSGAASIGAVDKGEQIHARLLKAGFESNLSISNALISMYSRCGNIEAAIQVFTEMEDWNVV-----SWTSIITGFAKHGFAT------KALDMFQEMLETGIKPNEVTYI 590    

HSP 2 Score: 506.908 bits (1304), Expect = 5.535e-167
Identity = 262/621 (42.19%), Postives = 403/621 (64.90%), Query Frame = 0
 
Query:   59 PDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSK---SGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNG-MERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAA---SVEIGKYAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSWIETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQHSEKIAVAFGLISTAKPKPIRIFKNLRICGDCHTAMKYISLATGRDIVVRDSNRFHHFVDGSCSCNEYW 672
            PD  T+S+++ +C       LG+ LH+ ++   L FD  V +  SL+ +Y+K    G +V ++ +FD + D  +++SW+++I+G+   G  ++E++ ++  MI+    PN F FS ++ AC +  +   G  I+   +K G    + CVG + I ++A+    M+ AR  FD + E+N V++ +++  YA+  +S +A E+F  + + G   D FTF+S++SG A +G +D G+Q+H+ ++K+G  +++ +  +L+ MY++ G ++  +  VF  M + N++SWT++ITG+    GF  +A++M+ +M+E+ + PNE+T+ ++L AC            Y   +  G+   N       SMY   G                +  Y  +VD   ++   +EA    N +  T    DA  + +LL       ++E+GK+A+EMI++Q+P+DPAA++LLSNLYAS  QW+ V +IRK MKQ+++VKE GCSWIET N VHKF+VG+TSHPQAR+IY +LDQLA+KIK++GY+PDTN VLH+V EEQKEQYLFQHSEKIAVAFGLIST+K KPIR+FKNLR+CGDCH AMKYIS+AT R+IV+RDSNRFHHF DG+CSCN+YW
Sbjct:  277 PDRFTFSSIISACAELEQLSLGQQLHSQVVKYRLAFD--VCVGCSLVDMYAKCATDGSMVNSRKVFDLLPDH-NVMSWTSVITGYVQGGGHDKEAIELYCRMIEDRVSPNHFTFSSLLKACGNLSDPTAGEQIYTHAVKLGLASVN-CVGNSHISMYARS-GRMEDARKAFDILFEKNLVSYNIIVDGYAKNLYSSEAFEIFNQIEDTGSGVDAFTFASLLSGAASIGAVDKGEQIHARLLKAGFESNLSISNALISMYSRCG-NIEAAIQVFTEMEDWNVVSWTSIITGFA-KHGFATKALDMFQEMLETGIKPNEVTYIAVLSACS-----------YVGMINEGWMHFN-------SMYKDHG------------IRPRMEHYACMVDLLGRSGYLEEAVKFINSMPFT---ADALVWRTLLGACGVHGNIELGKHASEMIIEQEPNDPAAYILLSNLYASAGQWEDVMKIRKCMKQKSLVKEAGCSWIETENKVHKFHVGETSHPQAREIYKELDQLALKIKEMGYVPDTNVVLHDVEEEQKEQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHNAMKYISMATEREIVLRDSNRFHHFNDGACSCNDYW 857    
BLAST of DCAR_021244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0DCT2 ((Tetratricopeptide repeat (TPR)-like superfamily protein {ECO:0000313|EMBL:GFS32177.1}))

HSP 1 Score: 621.313 bits (1601), Expect = 0.000e+0
Identity = 328/602 (54.49%), Postives = 423/602 (70.27%), Query Frame = 0
 
Query:    6 VSLPLPAKTPLKPININP-------------NFKPPNFD---DNLIHLANTAQIHKAMH-LITTHQHKLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAK--SGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAAS---VEIGKYAAEMILKQD-PSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSW--IETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYI 582
            +SL LP+ T   P++  P               K PNF+   D LI LAN   +H+A+  L    Q  LTPDL TYS LLKSCIRTR F+LGKL+H  L  S L  D   +++NSLI+LYSKSGD VTA  +F  +G+RRDLVSWSA+IS FAH+GME  +V  F+DM++ GE PNQFCF+ VI AC +  N   G+ +FGFVIKTGYFE+D+CVGCAL+DLFAKG+ D+  A  VFD+MPE+N+V+WTL ITRY+Q+G   +A+ELF+ MV +G++ DRFTFSS+IS CAEL  L +G+QLHS VVK  L+ DVCVGCSL+DMYAK  + GS+++SR VF+ + + N+MSWT++ITGYV  GG D+EAIE+Y +MIE RV PN  TFSSLLKACGNL+D  AGEQIY++ VKLG +SVNCVGNS +SMYARSG +EDA+KAF+ILFEKNL+SYNI+VD YAKNL S EAF+IFNQIEDT  GVDAFT+ASLLSGAAS   V+ G+     +LK    S+ +    L ++Y+     +   ++   M+  NVV     SW  I TG   H F        +A D++ ++ +  +K  ++ YI
Sbjct:    2 ISLSLPSPTKSVPLSFKPRNPSRQKTASSIQTVKHPNFELFKDRLIRLANVGHLHQAISALDVMTQQGLTPDLITYSVLLKSCIRTRQFNLGKLVHTKLSESQLELDS--VLINSLISLYSKSGDWVTANDIFQDMGERRDLVSWSAMISCFAHSGMESRAVSTFIDMLEFGECPNQFCFAAVIQACSNSENARTGMVVFGFVIKTGYFESDVCVGCALVDLFAKGMGDLNSAHKVFDKMPEKNSVSWTLTITRYSQLGQPQEAMELFVDMVVSGYMPDRFTFSSIISACAELEQLSLGQQLHSQVVKYRLAFDVCVGCSLVDMYAKCAADGSMVNSRKVFDLLPDHNVMSWTSVITGYVQGGGHDKEAIELYCRMIEDRVSPNHFTFSSLLKACGNLSDPTAGEQIYTHVVKLGLASVNCVGNSHISMYARSGRMEDARKAFDILFEKNLVSYNIIVDGYAKNLYSSEAFEIFNQIEDTGSGVDAFTFASLLSGAASIGAVDKGEQIHARLLKAGFESNLSISNALISMYSRCGNIEAAIQVFTEMEDWNVV-----SWTSIITGFAKHGFAT------KALDMFQEMLETGIKPNEVTYI 590    

HSP 2 Score: 509.99 bits (1312), Expect = 3.064e-168
Identity = 263/621 (42.35%), Postives = 405/621 (65.22%), Query Frame = 0
 
Query:   59 PDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSK---SGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNG-MERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAA---SVEIGKYAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSWIETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQHSEKIAVAFGLISTAKPKPIRIFKNLRICGDCHTAMKYISLATGRDIVVRDSNRFHHFVDGSCSCNEYW 672
            PD  T+S+++ +C       LG+ LH+ ++   L FD  V +  SL+ +Y+K    G +V ++ +FD + D  +++SW+++I+G+   G  ++E++ ++  MI+    PN F FS ++ AC +  +   G  I+  V+K G    + CVG + I ++A+    M+ AR  FD + E+N V++ +++  YA+  +S +A E+F  + + G   D FTF+S++SG A +G +D G+Q+H+ ++K+G  +++ +  +L+ MY++ G ++  +  VF  M + N++SWT++ITG+    GF  +A++M+ +M+E+ + PNE+T+ ++L AC            Y   +  G+   N       SMY   G                +  Y  +VD   ++   +EA    N +  T    DA  + +LL       ++E+GK+A+EMI++Q+P+DPAA++LLSNLYAS  QW+ V +IRK MKQ+++VKE GCSWIET N VHKF+VG+TSHPQAR+IY +LDQLA+KIK++GY+PDTN VLH+V EEQKEQYLFQHSEKIAVAFGLIST+K KPIR+FKNLR+CGDCH AMKYIS+ATGR+IV+RDSNRFHHF +G+CSCN+YW
Sbjct:  277 PDRFTFSSIISACAELEQLSLGQQLHSQVVKYRLAFD--VCVGCSLVDMYAKCAADGSMVNSRKVFDLLPDH-NVMSWTSVITGYVQGGGHDKEAIELYCRMIEDRVSPNHFTFSSLLKACGNLSDPTAGEQIYTHVVKLGLASVN-CVGNSHISMYARS-GRMEDARKAFDILFEKNLVSYNIIVDGYAKNLYSSEAFEIFNQIEDTGSGVDAFTFASLLSGAASIGAVDKGEQIHARLLKAGFESNLSISNALISMYSRCG-NIEAAIQVFTEMEDWNVVSWTSIITGFA-KHGFATKALDMFQEMLETGIKPNEVTYIAVLSACS-----------YVGMINEGWMHFN-------SMYKDHG------------IRPRMEHYACMVDLLGRSGYLEEAVKFINSMPFT---ADALVWRTLLGACGVHGNIELGKHASEMIIEQEPNDPAAYILLSNLYASAGQWEDVMKIRKCMKQKSLVKEAGCSWIETENKVHKFHVGETSHPQAREIYEELDQLALKIKEMGYVPDTNVVLHDVEEEQKEQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHNAMKYISMATGREIVLRDSNRFHHFNNGACSCNDYW 857    
BLAST of DCAR_021244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7I2V1 (DYW_deaminase domain-containing protein {ECO:0000259|Pfam:PF14432})

HSP 1 Score: 619.002 bits (1595), Expect = 0.000e+0
Identity = 307/483 (63.56%), Postives = 379/483 (78.47%), Query Frame = 0
 
Query:   11 PAKTPLKPININPNFKPPNFDDNLIHLANTAQIHKAMH-LITTHQHKLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSG--GSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAASV-EIGK 489
            P+   LK    +PNF+P  F D LI LAN   +H+A+  L    QH L+PDL TYS LLKSCIRTR FDLGKL+H+ L  S  + D   ++LNSLITLYSKSGD VTA  +F+ +G+ RD+VSWSA+IS FAHNGM+ +S+  F DM++ GE PNQFC + V+ AC +  N  +G  IFGFVIKTGYFE+D+C+GCALID+F KG  D+  A+ VFD M ERNAVTWTLMITRY+Q+G   DA+ELF+ MV +GF+ DRFTFSS I+ CAEL  L +G+QLHSLVVKS L+ DVCVGCSL+DMY K    GS+++SR VF+RM   N+MSWTA ITGYV SGG D+EAIE+Y +MI+ +V+PN  TFSSLLKACGNL+D  AGEQIY+NAVK G +SVNCVGNSL+SMYARSG +EDA+KAF+ILFEKNL+SYN +VD YAKNL+S+EAF++FN+IEDT I VDAFT+ASLLSGAAS+  +GK
Sbjct:   30 PSTQTLK----HPNFEP--FKDRLIRLANQGHLHQAISTLDLMTQHGLSPDLVTYSVLLKSCIRTRQFDLGKLVHSKLSHS--LLDPDSVLLNSLITLYSKSGDWVTANSIFNGMGEHRDMVSWSAMISCFAHNGMQSQSISTFFDMLEFGEYPNQFCLAAVMQACSNSKNAWIGKIIFGFVIKTGYFESDVCIGCALIDMFVKGCGDLGSAKKVFDIMRERNAVTWTLMITRYSQLGQPKDAVELFIDMVVSGFIPDRFTFSSTINACAELELLSLGQQLHSLVVKSRLTLDVCVGCSLVDMYVKCAVDGSMVNSRKVFDRMPNHNVMSWTATITGYVQSGGHDKEAIELYCRMIDGQVVPNHFTFSSLLKACGNLSDPAAGEQIYTNAVKHGLASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNTIVDGYAKNLDSNEAFELFNEIEDTGIEVDAFTFASLLSGAASIGAVGK 504    

HSP 2 Score: 496.508 bits (1277), Expect = 6.793e-163
Identity = 264/627 (42.11%), Postives = 400/627 (63.80%), Query Frame = 0
 
Query:   59 PDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSK---SGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNG-MERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLIS-----YNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAASV----EIGKYAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSWIETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQHSEKIAVAFGLISTAKPKPIRIFKNLRICGDCHTAMKYISLATGRDIVVRDSNRFHHFVDGSCSCNEYW 672
            PD  T+S+ + +C       LG+ LH+ ++ S L  D  V +  SL+ +Y K    G +V ++ +FD + +  +++SW+A I+G+  +G  ++E++ ++  MI     PN F FS ++ AC +  +   G  I+   +K G    + CVG +LI ++A+    M+ AR  FD + E+N V++  ++  YA+   S +A ELF  + + G   D FTF+S++SG A +G +  G+Q+H+ ++K+G  ++ C+  SL+ MY+K G ++  +  VF+ + +  ++SWT+++ G +   GF   A++M+ +M+++ + PNE+T+ ++L AC ++                                   G I +  K F  +++++ IS     Y  +VD   ++   +EA    N +       DA  + +LL GA  V    E+GK+AA+MI+KQ+P+DPAA++LLSNLYAS  QWD V  IRK MK+RN+VKE GCSWIET N V+ F+VGDTSHPQAR+IY +LDQL++KIK+LGY+P+TNFVLH+V E+QKEQYLFQHSEKIAVAFGLIST+K KPIR+FKNLR+CGDCHTAMKYIS+ATGR+IV+RDSNRFHHF  G+CSCN+YW
Sbjct:  278 PDRFTFSSTINACAELELLSLGQQLHSLVVKSRLTLD--VCVGCSLVDMYVKCAVDGSMVNSRKVFDRMPNH-NVMSWTATITGYVQSGGHDKEAIELYCRMIDGQVVPNHFTFSSLLKACGNLSDPAAGEQIYTNAVKHGLASVN-CVGNSLISMYARS-GRMEDARKAFDILFEKNLVSYNTIVDGYAKNLDSNEAFELFNEIEDTGIEVDAFTFASLLSGAASIGAVGKGEQIHARLMKAGFKSNQCISNSLISMYSKCG-NIEAALQVFSEIEDHTVISWTSIVMG-LAKHGFATRALKMFQEMLKTGIKPNEVTYIAVLSACSHV-----------------------------------GMINEGWKHFNAMYKEHRISPRMEHYACMVDLLGRSGFLEEAIQFINSMP---FMADALVWRTLL-GACQVHGNTEVGKHAAKMIIKQEPNDPAAYILLSNLYASSGQWDEVVRIRKNMKERNLVKEAGCSWIETENRVYNFHVGDTSHPQAREIYEELDQLSLKIKELGYVPNTNFVLHDVEEKQKEQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAMKYISIATGREIVLRDSNRFHHFKGGACSCNDYW 858    
BLAST of DCAR_021244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7V352 ((pentatricopeptide repeat-containing protein At3g49170, chloroplastic isoform X1 {ECO:0000313|RefSeq:XP_009760813.1}))

HSP 1 Score: 612.068 bits (1577), Expect = 0.000e+0
Identity = 329/616 (53.41%), Postives = 433/616 (70.29%), Query Frame = 0
 
Query:    4 VCVSLPLPAK-TPLKPINI--------NPNFKPPNFDDNLIHLANTAQIHKAMHLIT-THQHKLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKS--GGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAASV-EIGK---YAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSW--IETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYL 601
            + +SLP PAK  P  P N+        NPNF+     D LI  AN   + +A+  +    Q  LTPDL +Y+ LLKSCIRTRNF LG+LLH+ L +S L  D   I+LNSLI+LY+K GD  TAK +F+++G++RDLVSWSA+IS FAH GME E+V  F DM++ GE PNQFCFS VI ACCS     +GL IFGFV+KTGYFE+D+CVGCALIDLFAKG  D++ A+ VFDRMPERN VTWTLMITR++Q+G   DA+ LFL MV  GFV DRFTFS V+S CA++G    G+QLH  VVKS LS+DVCVGCSL+DMYAK    GS+ DSR VF++M++ N+MSWTA+ITGYV SG +D EAI++Y +MIE  V PN  TFSSLLKACGNL++   GEQIY++AVKLG +SVNCV NSL+SMYA+SG +E+A+KAFE+LFEKNL+SYNI+VD Y+KNL+S EAF++F+QI D+E+G+DAFT+ASLLSGAAS+  +GK     A ++     S+ +    L ++Y+     +  +++ + M+ RNV+     SW  I TG   H F        +A +++ Q+    +K  ++ YI   +   H  + E+  +Y 
Sbjct:    2 ITLSLPSPAKLIPPSPKNLTSLQIHRRNPNFEA--LKDRLIRQANVGNLKQAISTLDHISQMGLTPDLTSYTVLLKSCIRTRNFQLGELLHSKLNNSSLEPD--TIVLNSLISLYAKMGDWETAKMIFENMGEKRDLVSWSAMISCFAHCGMELEAVLTFFDMVEFGEYPNQFCFSAVIQACCSGEFGWIGLVIFGFVVKTGYFESDICVGCALIDLFAKGFCDLRSAKQVFDRMPERNLVTWTLMITRFSQLGADRDAVGLFLEMVSEGFVPDRFTFSGVLSACAQMGLSSFGRQLHGWVVKSRLSSDVCVGCSLVDMYAKCTMDGSMNDSRKVFDQMADHNVMSWTAIITGYVQSGCYDMEAIKLYCRMIEGPVKPNHFTFSSLLKACGNLSNLAVGEQIYNHAVKLGLASVNCVANSLISMYAKSGRMEEARKAFELLFEKNLVSYNIIVDGYSKNLDSTEAFELFSQI-DSEVGIDAFTFASLLSGAASIGAVGKGEQIHARVLKAGIHSNQSVCNALISMYSRCGNIEAASQVFERMEDRNVI-----SWTSIITGFAKHGFAY------RALELFNQMLGAGIKPNEITYIAVLSACSHVGLVEEGWKYF 601    

HSP 2 Score: 483.797 bits (1244), Expect = 4.129e-158
Identity = 258/628 (41.08%), Postives = 404/628 (64.33%), Query Frame = 0
 
Query:   57 LTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSK---SGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNG-MERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNA-----VKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGA---ASVEIGKYAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSWIETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQHSEKIAVAFGLISTAKPKPIRIFKNLRICGDCHTAMKYISLATGRDIVVRDSNRFHHFVDGSCSCNEYW 672
              PD  T+S +L +C +      G+ LH  ++ S L  D  V +  SL+ +Y+K    G +  ++ +FD + D  +++SW+AII+G+  +G  + E++ ++  MI+   +PN F FS ++ AC +  N+ VG  I+   +K G    + CV  +LI ++AK    M+ AR  F+ + E+N V++ +++  Y++   S +A ELF S +++    D FTF+S++SG A +G +  G+Q+H+ V+K+G+ ++  V  +L+ MY++ G ++  +  VF RM ++N++SWT++ITG+    GF   A+E++ +M+ + + PNEIT+ ++L AC ++   + G + + +      +        C    +V + +RSGS+E A     + F K+L                              + VDA  + +LL       ++++GKYAAEMIL+Q+P+DPAAHVLLSNLYAS+ +W+ V +IRK MK++ +VKE GCSWIE  N+VH+FYVGDT+HP+A++IY +LD++A+KIK++GY+P+T+ VLH V +EQKEQYLFQHSEKIA+AFGLIST+K KPIRIFKNLR+CGDCH AMK+IS+A GR+I+VRDSNRFHH  DG CSCN+YW
Sbjct:  268 FVPDRFTFSGVLSACAQMGLSSFGRQLHGWVVKSRLSSD--VCVGCSLVDMYAKCTMDGSMNDSRKVFDQMADH-NVMSWTAIITGYVQSGCYDMEAIKLYCRMIEGPVKPNHFTFSSLLKACGNLSNLAVGEQIYNHAVKLGLASVN-CVANSLISMYAKS-GRMEEARKAFELLFEKNLVSYNIIVDGYSKNLDSTEAFELF-SQIDSEVGIDAFTFASLLSGAASIGAVGKGEQIHARVLKAGIHSNQSVCNALISMYSRCG-NIEAASQVFERMEDRNVISWTSIITGFA-KHGFAYRALELFNQMLGAGIKPNEITYIAVLSACSHVGLVEEGWKYFDSMSSDHRITPRMEHYAC----MVDLLSRSGSLEKA-----VQFIKSL-----------------------------PLNVDALVWRTLLGACQVYGNLQLGKYAAEMILEQEPNDPAAHVLLSNLYASRGEWEEVAKIRKDMKEKRLVKEAGCSWIEAENSVHRFYVGDTNHPRAKEIYEKLDKVALKIKEIGYVPNTDLVLHEVEDEQKEQYLFQHSEKIALAFGLISTSKSKPIRIFKNLRVCGDCHNAMKFISVAEGREIIVRDSNRFHHIKDGLCSCNDYW 849    
BLAST of DCAR_021244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VG40 ((pentatricopeptide repeat-containing protein At3g49170, chloroplastic isoform X2 {ECO:0000313|RefSeq:XP_009760814.1}) (pentatricopeptide repeat-containing protein At3g49170, chloroplastic isoform X3 {ECO:0000313|RefSeq:XP_009760815.1}))

HSP 1 Score: 612.068 bits (1577), Expect = 0.000e+0
Identity = 329/616 (53.41%), Postives = 433/616 (70.29%), Query Frame = 0
 
Query:    4 VCVSLPLPAK-TPLKPINI--------NPNFKPPNFDDNLIHLANTAQIHKAMHLIT-THQHKLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKS--GGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAASV-EIGK---YAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSW--IETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYL 601
            + +SLP PAK  P  P N+        NPNF+     D LI  AN   + +A+  +    Q  LTPDL +Y+ LLKSCIRTRNF LG+LLH+ L +S L  D   I+LNSLI+LY+K GD  TAK +F+++G++RDLVSWSA+IS FAH GME E+V  F DM++ GE PNQFCFS VI ACCS     +GL IFGFV+KTGYFE+D+CVGCALIDLFAKG  D++ A+ VFDRMPERN VTWTLMITR++Q+G   DA+ LFL MV  GFV DRFTFS V+S CA++G    G+QLH  VVKS LS+DVCVGCSL+DMYAK    GS+ DSR VF++M++ N+MSWTA+ITGYV SG +D EAI++Y +MIE  V PN  TFSSLLKACGNL++   GEQIY++AVKLG +SVNCV NSL+SMYA+SG +E+A+KAFE+LFEKNL+SYNI+VD Y+KNL+S EAF++F+QI D+E+G+DAFT+ASLLSGAAS+  +GK     A ++     S+ +    L ++Y+     +  +++ + M+ RNV+     SW  I TG   H F        +A +++ Q+    +K  ++ YI   +   H  + E+  +Y 
Sbjct:    2 ITLSLPSPAKLIPPSPKNLTSLQIHRRNPNFEA--LKDRLIRQANVGNLKQAISTLDHISQMGLTPDLTSYTVLLKSCIRTRNFQLGELLHSKLNNSSLEPD--TIVLNSLISLYAKMGDWETAKMIFENMGEKRDLVSWSAMISCFAHCGMELEAVLTFFDMVEFGEYPNQFCFSAVIQACCSGEFGWIGLVIFGFVVKTGYFESDICVGCALIDLFAKGFCDLRSAKQVFDRMPERNLVTWTLMITRFSQLGADRDAVGLFLEMVSEGFVPDRFTFSGVLSACAQMGLSSFGRQLHGWVVKSRLSSDVCVGCSLVDMYAKCTMDGSMNDSRKVFDQMADHNVMSWTAIITGYVQSGCYDMEAIKLYCRMIEGPVKPNHFTFSSLLKACGNLSNLAVGEQIYNHAVKLGLASVNCVANSLISMYAKSGRMEEARKAFELLFEKNLVSYNIIVDGYSKNLDSTEAFELFSQI-DSEVGIDAFTFASLLSGAASIGAVGKGEQIHARVLKAGIHSNQSVCNALISMYSRCGNIEAASQVFERMEDRNVI-----SWTSIITGFAKHGFAY------RALELFNQMLGAGIKPNEITYIAVLSACSHVGLVEEGWKYF 601    

HSP 2 Score: 481.485 bits (1238), Expect = 3.314e-157
Identity = 260/629 (41.34%), Postives = 404/629 (64.23%), Query Frame = 0
 
Query:   57 LTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSK---SGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNG-MERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNA-----VKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAASV----EIGKYAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSWIETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQHSEKIAVAFGLISTAKPKPIRIFKNLRICGDCHTAMKYISLATGRDIVVRDSNRFHHFVDGSCSCNEYW 672
              PD  T+S +L +C +      G+ LH  ++ S L  D  V +  SL+ +Y+K    G +  ++ +FD + D  +++SW+AII+G+  +G  + E++ ++  MI+   +PN F FS ++ AC +  N+ VG  I+   +K G    + CV  +LI ++AK    M+ AR  F+ + E+N V++ +++  Y++   S +A ELF S +++    D FTF+S++SG A +G +  G+Q+H+ V+K+G+ ++  V  +L+ MY++ G ++  +  VF RM ++N++SWT++ITG+    GF   A+E++ +M+ + + PNEIT+ ++L AC ++   + G + + +      +        C    +V + +RSGS+E A     + F K+L                              + VDA  + +LL GA  V    ++GKYAAEMIL+Q+P+DPAAHVLLSNLYAS+ +W+ V +IRK MK++ +VKE GCSWIE  N+VH+FYVGDT+HP+A++IY +LD++A+KIK++GY+P+T+ VLH V +EQKEQYLFQHSEKIA+AFGLIST+K KPIRIFKNLR+CGDCH AMK+IS+A GR+I+VRDSNRFHH  D  CSCN+YW
Sbjct:  268 FVPDRFTFSGVLSACAQMGLSSFGRQLHGWVVKSRLSSD--VCVGCSLVDMYAKCTMDGSMNDSRKVFDQMADH-NVMSWTAIITGYVQSGCYDMEAIKLYCRMIEGPVKPNHFTFSSLLKACGNLSNLAVGEQIYNHAVKLGLASVN-CVANSLISMYAKS-GRMEEARKAFELLFEKNLVSYNIIVDGYSKNLDSTEAFELF-SQIDSEVGIDAFTFASLLSGAASIGAVGKGEQIHARVLKAGIHSNQSVCNALISMYSRCG-NIEAASQVFERMEDRNVISWTSIITGFA-KHGFAYRALELFNQMLGAGIKPNEITYIAVLSACSHVGLVEEGWKYFDSMSSDHRITPRMEHYAC----MVDLLSRSGSLEKA-----VQFIKSL-----------------------------PLNVDALVWRTLL-GACQVYGNLQLGKYAAEMILEQEPNDPAAHVLLSNLYASRGEWEEVAKIRKDMKEKRLVKEAGCSWIEAENSVHRFYVGDTNHPRAKEIYEKLDKVALKIKEIGYVPNTDLVLHEVEDEQKEQYLFQHSEKIALAFGLISTSKSKPIRIFKNLRVCGDCHNAMKFISVAEGREIIVRDSNRFHHITDELCSCNDYW 849    
BLAST of DCAR_021244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3YZ42 ((pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like isoform X2 {ECO:0000313|RefSeq:XP_016457117.1}))

HSP 1 Score: 610.912 bits (1574), Expect = 0.000e+0
Identity = 330/616 (53.57%), Postives = 433/616 (70.29%), Query Frame = 0
 
Query:    4 VCVSLPLPAK-TPLKPINI--------NPNFKPPNFDDNLIHLANTAQIHKAMHLIT-THQHKLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKS--GGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAASV-EIGK---YAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSW--IETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYL 601
            + +SLP PAK  P  P N+        NPNF+     D LI  AN   + +A+  +    Q  LTPDL +Y+ LLKSCIRTRNF LG+LLH+ L +S L  D   I+LNSLI+LY+K GD  TAK +F+++G++RDLVSWSA+IS FAH GME E+V  F DM++ GE PNQFCFS VI ACCS     +GL IFGFV+KTGYFE+D+CVGCALIDLFAKG  D++ A+ VFDRMPERN VTWTLMITR++Q+G   DA+ LFL MV  GFV DRFTFS V+S CA+LG    G+QLH  VVKS LS+DVCVGCSL+DMYAK    GS+ DSR VF++M++ N+MSWTA+ITGYV SG +D EAI++Y +MIE  V PN  TFSSLLKACGNL++   GEQIY++AVKLG +SVNCV NSL+SMYA+SG +E+A+KAFE+LFEKNL+SYNI+VD Y+KNL+S EAF++F+QI D+E+G+DAFT+ASLLSGAAS+  +GK     A ++     S+ +    L ++Y+     +  +++ + M+ RNV+     SW  I TG   H F        +A +++ Q+    +K  ++ YI   +   H  + E+  +Y 
Sbjct:    2 ITLSLPSPAKLIPPSPKNLTSLQIHRRNPNFEA--LKDRLIRQANVGNLKQAISTLDHISQMGLTPDLTSYTVLLKSCIRTRNFQLGELLHSKLNNSSLEPD--TIVLNSLISLYAKMGDWETAKMIFENMGEKRDLVSWSAMISCFAHCGMELEAVLTFFDMVEFGEYPNQFCFSAVIQACCSGVFGWIGLVIFGFVVKTGYFESDICVGCALIDLFAKGFCDLRSAKQVFDRMPERNLVTWTLMITRFSQLGADRDAVGLFLEMVSEGFVPDRFTFSGVLSACAQLGLSLFGRQLHGWVVKSRLSSDVCVGCSLVDMYAKCTMDGSMNDSRKVFDQMADHNVMSWTAIITGYVQSGCYDMEAIKLYCRMIEGPVKPNHFTFSSLLKACGNLSNLAVGEQIYNHAVKLGLASVNCVANSLISMYAKSGRMEEARKAFELLFEKNLVSYNIIVDGYSKNLDSTEAFELFSQI-DSEVGIDAFTFASLLSGAASIGAVGKGEQIHARVLKAGIHSNQSVCNALISMYSRCGNIEAASQVFERMEDRNVI-----SWTSIITGFAKHGFAY------RALELFNQMLGAGIKPNEITYIAVLSACSHVGLVEEGWKYF 601    

HSP 2 Score: 481.1 bits (1237), Expect = 4.242e-157
Identity = 258/628 (41.08%), Postives = 403/628 (64.17%), Query Frame = 0
 
Query:   57 LTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSK---SGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNG-MERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNA-----VKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGA---ASVEIGKYAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSWIETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQHSEKIAVAFGLISTAKPKPIRIFKNLRICGDCHTAMKYISLATGRDIVVRDSNRFHHFVDGSCSCNEYW 672
              PD  T+S +L +C +      G+ LH  ++ S L  D  V +  SL+ +Y+K    G +  ++ +FD + D  +++SW+AII+G+  +G  + E++ ++  MI+   +PN F FS ++ AC +  N+ VG  I+   +K G    + CV  +LI ++AK    M+ AR  F+ + E+N V++ +++  Y++   S +A ELF S +++    D FTF+S++SG A +G +  G+Q+H+ V+K+G+ ++  V  +L+ MY++ G ++  +  VF RM ++N++SWT++ITG+    GF   A+E++ +M+ + + PNEIT+ ++L AC ++   + G + + +      +        C    +V + +RSGS+E A     + F K+L                              + VDA  + +LL       ++++GKYAAEMIL+Q+PSDPAAHVLLSNLYAS+ +W+ V +IRK MK++ +VKE GCSWIE  N+VH+FYVGDT+HP+A++IY +LD++A+KIK++GY+P+T+ VLH V +EQKEQYLFQHSEKIA+AFGLIST+K KPIRIFKNLR+CGDCH AMK+IS+A GR+I+VRDSNRFHH  D  CSCN+YW
Sbjct:  268 FVPDRFTFSGVLSACAQLGLSLFGRQLHGWVVKSRLSSD--VCVGCSLVDMYAKCTMDGSMNDSRKVFDQMADH-NVMSWTAIITGYVQSGCYDMEAIKLYCRMIEGPVKPNHFTFSSLLKACGNLSNLAVGEQIYNHAVKLGLASVN-CVANSLISMYAKS-GRMEEARKAFELLFEKNLVSYNIIVDGYSKNLDSTEAFELF-SQIDSEVGIDAFTFASLLSGAASIGAVGKGEQIHARVLKAGIHSNQSVCNALISMYSRCG-NIEAASQVFERMEDRNVISWTSIITGFA-KHGFAYRALELFNQMLGAGIKPNEITYIAVLSACSHVGLVEEGWKYFDSMSSDHRITPRMEHYAC----MVDLLSRSGSLEKA-----VQFIKSL-----------------------------PLNVDALVWRTLLGACQVYGNLQLGKYAAEMILEQEPSDPAAHVLLSNLYASRGEWEEVAKIRKDMKEKRLVKEAGCSWIEAENSVHRFYVGDTNHPRAKEIYEKLDKVALKIKEIGYVPNTDLVLHEVEDEQKEQYLFQHSEKIALAFGLISTSKSKPIRIFKNLRVCGDCHNAMKFISVAEGREIIVRDSNRFHHITDELCSCNDYW 849    
BLAST of DCAR_021244 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3YXQ0 ((pentatricopeptide repeat-containing protein At3g49170, chloroplastic-like isoform X1 {ECO:0000313|RefSeq:XP_016457116.1}))

HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0
Identity = 330/616 (53.57%), Postives = 433/616 (70.29%), Query Frame = 0
 
Query:    4 VCVSLPLPAK-TPLKPINI--------NPNFKPPNFDDNLIHLANTAQIHKAMHLIT-THQHKLTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSKSGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNGMERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKS--GGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNAVKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGAASV-EIGK---YAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSW--IETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYL 601
            + +SLP PAK  P  P N+        NPNF+     D LI  AN   + +A+  +    Q  LTPDL +Y+ LLKSCIRTRNF LG+LLH+ L +S L  D   I+LNSLI+LY+K GD  TAK +F+++G++RDLVSWSA+IS FAH GME E+V  F DM++ GE PNQFCFS VI ACCS     +GL IFGFV+KTGYFE+D+CVGCALIDLFAKG  D++ A+ VFDRMPERN VTWTLMITR++Q+G   DA+ LFL MV  GFV DRFTFS V+S CA+LG    G+QLH  VVKS LS+DVCVGCSL+DMYAK    GS+ DSR VF++M++ N+MSWTA+ITGYV SG +D EAI++Y +MIE  V PN  TFSSLLKACGNL++   GEQIY++AVKLG +SVNCV NSL+SMYA+SG +E+A+KAFE+LFEKNL+SYNI+VD Y+KNL+S EAF++F+QI D+E+G+DAFT+ASLLSGAAS+  +GK     A ++     S+ +    L ++Y+     +  +++ + M+ RNV+     SW  I TG   H F        +A +++ Q+    +K  ++ YI   +   H  + E+  +Y 
Sbjct:    2 ITLSLPSPAKLIPPSPKNLTSLQIHRRNPNFEA--LKDRLIRQANVGNLKQAISTLDHISQMGLTPDLTSYTVLLKSCIRTRNFQLGELLHSKLNNSSLEPD--TIVLNSLISLYAKMGDWETAKMIFENMGEKRDLVSWSAMISCFAHCGMELEAVLTFFDMVEFGEYPNQFCFSAVIQACCSGVFGWIGLVIFGFVVKTGYFESDICVGCALIDLFAKGFCDLRSAKQVFDRMPERNLVTWTLMITRFSQLGADRDAVGLFLEMVSEGFVPDRFTFSGVLSACAQLGLSLFGRQLHGWVVKSRLSSDVCVGCSLVDMYAKCTMDGSMNDSRKVFDQMADHNVMSWTAIITGYVQSGCYDMEAIKLYCRMIEGPVKPNHFTFSSLLKACGNLSNLAVGEQIYNHAVKLGLASVNCVANSLISMYAKSGRMEEARKAFELLFEKNLVSYNIIVDGYSKNLDSTEAFELFSQI-DSEVGIDAFTFASLLSGAASIGAVGKGEQIHARVLKAGIHSNQSVCNALISMYSRCGNIEAASQVFERMEDRNVI-----SWTSIITGFAKHGFAY------RALELFNQMLGAGIKPNEITYIAVLSACSHVGLVEEGWKYF 601    

HSP 2 Score: 482.641 bits (1241), Expect = 1.051e-157
Identity = 259/628 (41.24%), Postives = 404/628 (64.33%), Query Frame = 0
 
Query:   57 LTPDLNTYSTLLKSCIRTRNFDLGKLLHNNLISSGLVFDDHVIMLNSLITLYSK---SGDLVTAKCLFDSVGDRRDLVSWSAIISGFAHNG-MERESVCMFVDMIKSGERPNQFCFSGVIHACCSRGNVDVGLGIFGFVIKTGYFEADLCVGCALIDLFAKGLSDMKLARVVFDRMPERNAVTWTLMITRYAQMGFSGDALELFLSMVENGFVADRFTFSSVISGCAELGWLDVGKQLHSLVVKSGLSTDVCVGCSLLDMYAKSGGSLIDSRNVFNRMSEQNIMSWTAMITGYVLSGGFDREAIEMYIKMIESRVLPNEITFSSLLKACGNLADTKAGEQIYSNA-----VKLGFSSVNCVGNSLVSMYARSGSIEDAQKAFEILFEKNLISYNILVDAYAKNLNSDEAFDIFNQIEDTEIGVDAFTYASLLSGA---ASVEIGKYAAEMILKQDPSDPAAHVLLSNLYASKSQWDHVTEIRKGMKQRNVVKEVGCSWIETGNTVHKFYVGDTSHPQARDIYGQLDQLAVKIKKLGYIPDTNFVLHNVVEEQKEQYLFQHSEKIAVAFGLISTAKPKPIRIFKNLRICGDCHTAMKYISLATGRDIVVRDSNRFHHFVDGSCSCNEYW 672
              PD  T+S +L +C +      G+ LH  ++ S L  D  V +  SL+ +Y+K    G +  ++ +FD + D  +++SW+AII+G+  +G  + E++ ++  MI+   +PN F FS ++ AC +  N+ VG  I+   +K G    + CV  +LI ++AK    M+ AR  F+ + E+N V++ +++  Y++   S +A ELF S +++    D FTF+S++SG A +G +  G+Q+H+ V+K+G+ ++  V  +L+ MY++ G ++  +  VF RM ++N++SWT++ITG+    GF   A+E++ +M+ + + PNEIT+ ++L AC ++   + G + + +      +        C    +V + +RSGS+E A     + F K+L                              + VDA  + +LL       ++++GKYAAEMIL+Q+PSDPAAHVLLSNLYAS+ +W+ V +IRK MK++ +VKE GCSWIE  N+VH+FYVGDT+HP+A++IY +LD++A+KIK++GY+P+T+ VLH V +EQKEQYLFQHSEKIA+AFGLIST+K KPIRIFKNLR+CGDCH AMK+IS+A GR+I+VRDSNRFHH  DG CSCN+YW
Sbjct:  268 FVPDRFTFSGVLSACAQLGLSLFGRQLHGWVVKSRLSSD--VCVGCSLVDMYAKCTMDGSMNDSRKVFDQMADH-NVMSWTAIITGYVQSGCYDMEAIKLYCRMIEGPVKPNHFTFSSLLKACGNLSNLAVGEQIYNHAVKLGLASVN-CVANSLISMYAKS-GRMEEARKAFELLFEKNLVSYNIIVDGYSKNLDSTEAFELF-SQIDSEVGIDAFTFASLLSGAASIGAVGKGEQIHARVLKAGIHSNQSVCNALISMYSRCG-NIEAASQVFERMEDRNVISWTSIITGFA-KHGFAYRALELFNQMLGAGIKPNEITYIAVLSACSHVGLVEEGWKYFDSMSSDHRITPRMEHYAC----MVDLLSRSGSLEKA-----VQFIKSL-----------------------------PLNVDALVWRTLLGACQVYGNLQLGKYAAEMILEQEPSDPAAHVLLSNLYASRGEWEEVAKIRKDMKEKRLVKEAGCSWIEAENSVHRFYVGDTNHPRAKEIYEKLDKVALKIKEIGYVPNTDLVLHEVEDEQKEQYLFQHSEKIALAFGLISTSKSKPIRIFKNLRVCGDCHNAMKFISVAEGREIIVRDSNRFHHIKDGLCSCNDYW 849    
Match NameStatsDescription
A0A5N6LCB1E-Value: 0.000e+0, PID: 53.44DYW_deaminase domain-containing protein {ECO:00002... [more]
A0A5A7QPB0E-Value: 3.937e-142, PID: 52.69(Pentatricopeptide repeat-containing protein {ECO:... [more]
A0A151QYR4E-Value: 0.000e+0, PID: 49.27DYW_deaminase domain-containing protein {ECO:00002... [more]
A0A2R6Q961E-Value: 5.535e-167, PID: 54.62(Pentatricopeptide repeat-containing protein {ECO:... [more]
A0A7J0DCT2E-Value: 3.064e-168, PID: 54.49(Tetratricopeptide repeat (TPR)-like superfamily p... [more]
A0A7J7I2V1E-Value: 6.793e-163, PID: 63.56DYW_deaminase domain-containing protein {ECO:00002... [more]
A0A1U7V352E-Value: 4.129e-158, PID: 53.41(pentatricopeptide repeat-containing protein At3g4... [more]
A0A1U7VG40E-Value: 3.314e-157, PID: 53.41(pentatricopeptide repeat-containing protein At3g4... [more]
A0A1S3YZ42E-Value: 4.242e-157, PID: 53.57(pentatricopeptide repeat-containing protein At3g4... [more]
A0A1S3YXQ0E-Value: 1.051e-157, PID: 53.57(pentatricopeptide repeat-containing protein At3g4... [more]

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Analysis: 
NameDescription

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search

This analysis is a blastp search of all of the DCAR V1.0 Gene Prediction polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove these same DCAR gene predictions.

For gene model prediction, mobile element–related repeats were masked using RepeatMasker. De novo prediction using AUGUSTUS v2.5.5, GENSCAN v.1.1.0, and GlimmerHMM-3.0.1 was trained using model species A. thaliana and S. lycoperisum training sets. The protein sequences of S. lycoperisum, Solanum tuberosum, A. thaliana, Brassica rapa, and Oryza sativa were mapped to the carrot genome using TBLASTN (BLAST All 2.2.23) and analyzed with GeneWise version 2.2.0. Carrot ESTs were aligned to the genome using BLAT and analyzed with PASA to detect spliced gene models. RNA-seq reads from 20 DH1 libraries were aligned with TopHat 2.0.9. Transcripts were predicted by Cufflinks. All gene models produced by de novo prediction, protein homology searches, and prediction and transcript-based evidence were integrated using GLEAN v1.1. Putative gene functions were assigned using the best BLASTP match to SwissProt and TrEMBL databases. Gene motifs and domains were determined with InterProScan version 4.7 against the ProDom, PRINTS, Pfam, SMART, PANTHER, and PROSITE protein databases. GO IDs for each gene were obtained from the corresponding InterPro entries. All genes were aligned against KEGG (release 58) proteins.

Data from this analysis can be viewed in JBrowse here.

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