Resource Type:
Polypeptide
Name:
XM_017374472.1
Identifier:
XM_017374472.1-protein
Sequence:
MSTSSIRKAIGAVKDQTSIGIAKVASNEAPELEVAIVKATSHDDDPADEK
YIQRILQLTSYSRGYVSVCVAKLSKRLGKTRDWIVALKSLILVHRLLNGG
DLVFQQEIMFTTRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRL
EMIVYERKQSGGSNGGEIQKWRSPPNNRGYEYDNYESRGPNGYGSQGMRR
ARSFEDVRESEAGKKAVTPLREMTPERIFGKMSHLQRLLDRLLSCRPTGL
AKNNRMVLVALYPIVRESFKLYADICEVLAVLLDRFFDMEYNDCVKAFDA
YTSAAKQIDELVSFYNWCKDTGVARSSEYPEVQMITGKLLETLEEFVRDR
AKAMKTPERKVEPAPVVQEEEPVPDMNEIKALPAPETYTAPPPPEPEAPQ
PPKPQVTGDLVDLREDTMTPDDQGNKFALALFAGPAANNKSTNGNWEAFP
SNGEPEVTSAWQNPAAESGKADWELALVETASNLSNQKAAMGGGMDPLLL
NGMYDQGVVRQHVSSAQFGGGSSSSVALPGMGKSATPVLALPAPDGTVQT
VGGDPFAASLSIPPPSYVQMAEIEKKQQLLVQEQMVWQQYAREGMQGQTS
LSKINGGGYYPPAMPYGMPPVNGMGYPPPGQYYNQY
Sequence Length:
636
Sequence Checksum:
5a766781bc8fd20f8b134b5f93e08ef3
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017374472.1, derives from mRNA, XM_017374472.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017374472.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017374472.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4L3V5 (ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942} (Fragment))
HSP 1 Score: 1000.73 bits (2586), Expect = 0.000e+0
Identity = 502/649 (77.35%), Postives = 558/649 (85.98%), Query Frame = 0
Match: A0A6A4L3V5 (ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942} (Fragment))
HSP 1 Score: 1000.73 bits (2586), Expect = 0.000e+0
Identity = 502/649 (77.35%), Postives = 558/649 (85.98%), Query Frame = 0
Query: 1 MSTSSIRKAIGAVKDQTSIGIAKVASNEAPELEVAIVKATSHDDDPADEKYIQRILQLTSYSRGYVSVCVAKLSKRLGKTRDWIVALKSLILVHRLLNGGDLVFQQEIMFTTRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRLEMIVYERKQSGGSN---------GGEIQKWRSPPNNRGYEYDNYESRGPNGYGSQGMRRARSFEDVRESEAGKKAV-TPLREMTPERIFGKMSHLQRLLDRLLSCRPTGLAKNNRMVLVALYPIVRESFKLYADICEVLAVLLDRFFDMEYNDCVKAFDAYTSAAKQIDELVSFYNWCKDTGVARSSEYPEVQMITGKLLETLEEFVRDRAKAMKTPERKVEPAPVVQEEEPVPDMNEIKALPA-PETYTAPPPPEPEAPQPPKPQVTGDLVDLREDTMTPDDQGNKFALALFAGPAANNKSTNGNWEAFPSNGEPEVTSAWQNPAAESGKADWELALVETASNLSNQKAAMGGGMDPLLLNGMYDQGVVRQHVSSAQFGGGSSSSVALPGMGKSATPVLALPAPDGTVQTVGGDPFAASLSIPPPSYVQMAEIEKKQQLLVQEQMVWQQYAREGMQGQTSLSKINGGGYYPPA----MPYGMPPVNGMGYPPPGQYYN 634
M+ S+IRKAIGAVKDQTSIGIAKV+SN APELEVAIVKATSHDD+PAD+KY++ IL LTSYSRGYV+ CVA +SKRLGKTRDWIVALK+LILVHRLL GD VF QEIM+ TR+GTRLLNMSDFRDEAHS+SWD+SAFVRT+A++LDQ+LE+++YERKQSGG G ++WRSPPN RGYEYDN+ESR + YG GMRR RS DVRE+E V TPLR+M PER+FGKM HLQRLLDRLL+CRPTG+AKN+RMVLVALYP+V+ESFKLYADICEVLAVLLDRFFDMEY+DCVKAFDAY SAAKQIDELV+FYNWCKDTGVARSSE+PEVQ ITGKLLETLEEFVRDRAKA K+PERKVE V +EEEPVPDMNEIKALPA PPPP P+ Q TGDLVDLRE+ MT DDQGN+ ALALFAGPA N NG+WEAFPSNGEPEV SAW NPAAESGKADWELALVE+ASNLS QKAAMGGG+DPLLLNG+YDQG+VRQHVS+AQ GGS+SSVALP GKSATPVLALPAPDGTVQTVGGDPFAASLSIPPP+YVQM+++EKKQQ LVQEQ+VWQQYAR+GMQGQTSL+KI+GGGYY P MPYGMPPVNGMG PP G YY
Sbjct: 1 MAPSTIRKAIGAVKDQTSIGIAKVSSNMAPELEVAIVKATSHDDEPADDKYLREILHLTSYSRGYVAACVAAVSKRLGKTRDWIVALKTLILVHRLLADGDPVFHQEIMYATRRGTRLLNMSDFRDEAHSNSWDNSAFVRTYALFLDQKLELMLYERKQSGGGGGGGGELERYGSREERWRSPPN-RGYEYDNFESR-EDSYGGGGMRRVRSSGDVRENERRDVVVITPLRDMKPERVFGKMGHLQRLLDRLLACRPTGMAKNSRMVLVALYPLVKESFKLYADICEVLAVLLDRFFDMEYSDCVKAFDAYVSAAKQIDELVAFYNWCKDTGVARSSEFPEVQRITGKLLETLEEFVRDRAKAGKSPERKVEQPVVKEEEEPVPDMNEIKALPAPENYTPPPPPPPEPEAPKPQKQDTGDLVDLREEAMTADDQGNRLALALFAGPATNK--GNGSWEAFPSNGEPEVNSAWDNPAAESGKADWELALVESASNLSKQKAAMGGGLDPLLLNGIYDQGIVRQHVSTAQLSGGSASSVALPAAGKSATPVLALPAPDGTVQTVGGDPFAASLSIPPPAYVQMSDMEKKQQFLVQEQVVWQQYARDGMQGQTSLTKISGGGYYTPGVQPMMPYGMPPVNGMGVPPAGYYYT 645
BLAST of XM_017374472.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9TFB5 ((putative clathrin assembly protein At2g25430 {ECO:0000313|RefSeq:XP_011081548.1, ECO:0000313|RefSeq:XP_011081550.1}))
HSP 1 Score: 984.171 bits (2543), Expect = 0.000e+0
Identity = 507/651 (77.88%), Postives = 553/651 (84.95%), Query Frame = 0
Match: A0A6I9TFB5 ((putative clathrin assembly protein At2g25430 {ECO:0000313|RefSeq:XP_011081548.1, ECO:0000313|RefSeq:XP_011081550.1}))
HSP 1 Score: 984.171 bits (2543), Expect = 0.000e+0
Identity = 507/651 (77.88%), Postives = 553/651 (84.95%), Query Frame = 0
Query: 1 MSTSSIRKAIGAVKDQTSIGIAKVASNEAPELEVAIVKATSHDDDPADEKYIQRILQLTSYSRGYVSVCVAKLSKRLGKTRDWIVALKSLILVHRLLNGGDLVFQQEIMFTTRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRLEMIVYERKQSGGSNGGEIQK----------WRSPP-NNRGYEYDNYESRGPNGYGSQGMRRARSFEDVRESEAGKKAVTPLREMTPERIFGKMSHLQRLLDRLLSCRPTGLAKNNRMVLVALYPIVRESFKLYADICEVLAVLLDRFFDMEYNDCVKAFDAYTSAAKQIDELVSFYNWCKDTGVARSSEYPEVQMITGKLLETLEEFVRDRAKAMKTPERKVEPAPVVQEEEPVPDMNEIKALPAPETYTAPPPPEPEAPQPPKPQVTGDLVDLREDTMTPDDQGNKFALALFAGPAANNKSTNGNWEAFPSNGEPEVTSAWQNPAAESGKADWELALVETASNLSNQKAAMGGGMDPLLLNGMYDQGVVRQHVSSAQFGGGSSSSVALPGMGKSATPVLALPAPDGTVQTVGGDPFAASLSIPPPSYVQMAEIEKKQQLLVQEQMVWQQYAREGMQGQTSLSKINGGGYYPPA----MPYGMPPVNGMGYPPPGQYYNQY 636
M+ S+IRKAIGAVKDQTSIGIAKVASN APELEVAIVKATSHDDDPA EKYI+ IL LTSYSRGYVS CV +SKRLGKTRDWIVALK L+L+HRLLN GD VFQQEIM TR+GTRLLN+SDFRDEAHS+SWDHSAFVRT+A+YLDQRLE++VYERKQSG NGGEI++ +RSPP +NRGY+YD E RG GYG MRR+RS DV +S +K VTPLREM PERIFGKM HLQRLLDR LSCRPTGLAKN RM+LVALY I++ESFKLYAD+CEVLAVLLD+FFDMEY DCVKAFDAY SAAKQIDELVSFYNWCKD GVARSSEYPEVQ IT KLLETLEEFVRDRAKAMK+PERK E P QEEEPVPDMNEIKALP PE Y PPPPEPE P+ Q TGDL+DLR++ +T DDQGNK ALALFAG ANN NG WEAFPSNGEPEVTSAWQNPAAE GKADWELALVE+AS+LS QKA MGGG+DPLLLNGMYDQG+VRQHVS+AQ GGS+SSVALPG G S TPVLALPAPDGTVQTVG DPFAASLSIPPP YVQMA++EKKQQLLVQEQ+VWQQYAR+GMQGQ SL+KI+ GGYY P MPYGMPPVNG+G PP G Y+ Y
Sbjct: 1 MAPSTIRKAIGAVKDQTSIGIAKVASNMAPELEVAIVKATSHDDDPASEKYIREILHLTSYSRGYVSACVVAVSKRLGKTRDWIVALKCLMLIHRLLNDGDPVFQQEIMRATRRGTRLLNLSDFRDEAHSNSWDHSAFVRTYALYLDQRLELMVYERKQSG--NGGEIERFGGSRDDRYNYRSPPGSNRGYDYDYNEHRGEPGYG---MRRSRSSGDVTDSTMERKDVTPLREMNPERIFGKMGHLQRLLDRFLSCRPTGLAKNERMILVALYAIIKESFKLYADVCEVLAVLLDKFFDMEYQDCVKAFDAYASAAKQIDELVSFYNWCKDIGVARSSEYPEVQRITSKLLETLEEFVRDRAKAMKSPERKEETKPAPQEEEPVPDMNEIKALPPPEDYNPPPPPEPEPPK-LAIQETGDLLDLRDEGVTADDQGNKLALALFAGTVANN--GNGLWEAFPSNGEPEVTSAWQNPAAEMGKADWELALVESASHLSKQKATMGGGLDPLLLNGMYDQGMVRQHVSTAQLSGGSASSVALPGPGASKTPVLALPAPDGTVQTVGQDPFAASLSIPPPPYVQMADMEKKQQLLVQEQIVWQQYARDGMQGQASLAKISTGGYYAPGVQPVMPYGMPPVNGVGIPPAGYYHAPY 643
BLAST of XM_017374472.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9I2H8 ((Clathrin assembly protein AP180 {ECO:0000313|EMBL:PIN23972.1}))
HSP 1 Score: 978.778 bits (2529), Expect = 0.000e+0
Identity = 494/651 (75.88%), Postives = 553/651 (84.95%), Query Frame = 0
Match: A0A2G9I2H8 ((Clathrin assembly protein AP180 {ECO:0000313|EMBL:PIN23972.1}))
HSP 1 Score: 978.778 bits (2529), Expect = 0.000e+0
Identity = 494/651 (75.88%), Postives = 553/651 (84.95%), Query Frame = 0
Query: 1 MSTSSIRKAIGAVKDQTSIGIAKVASNEAPELEVAIVKATSHDDDPADEKYIQRILQLTSYSRGYVSVCVAKLSKRLGKTRDWIVALKSLILVHRLLNGGDLVFQQEIMFTTRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRLEMIVYERKQSGGSNGGEIQK---------WRSPP-NNRGYEYDNYESRGPNGYGSQGMRRARSFEDVRESEAGKKAVTPLREMTPERIFGKMSHLQRLLDRLLSCRPTGLAKNNRMVLVALYPIVRESFKLYADICEVLAVLLDRFFDMEYNDCVKAFDAYTSAAKQIDELVSFYNWCKDTGVARSSEYPEVQMITGKLLETLEEFVRDRAKAMKTPERKVEPAPVVQEEEPVPDMNEIKALPAPETYTAPPPPEPEAPQPPKPQVTGDLVDLREDTMTPDDQGNKFALALFAGPAANNKSTNGNWEAFPSNGEPEVTSAWQNPAAESGKADWELALVETASNLSNQKAAMGGGMDPLLLNGMYDQGVVRQHVSSAQFGGGSSSSVALPGMGKSATPVLALPAPDGTVQTVGGDPFAASLSIPPPSYVQMAEIEKKQQLLVQEQMVWQQYAREGMQGQTSLSKINGGGYY-----PPAMPYGMPPVNGMGYPPPGQYYNQY 636
M+ ++IRKAIGAVKDQTSIGIAKVASN APELEVAIVKATSHDDDPA EKYI+ IL LTSYS GYVS CV +SKRLGKTRDWIVALK L+L+HRLLN GD VFQQEIM+ TR+GTRLLN+SDFRDEAHS+SWDHSAFVRT+A+YLDQRLE++VYERKQSG NG EI++ +RSPP +NRGY+Y+ + PN GMRR+RS DVRES KK TPLREMTPER+ GKM HLQRLLDR LSCRPTGLAKN RM+LVALY IV+ESFKLY D+CEVLAVLLD+FFDMEY DCVKAFDAY SAAKQIDELV FYNWCKD GVARSSEYPEVQMIT KLLETLEEFVRDRAKA+K+P+RKVE P Q+EEPV DMNE+KALPAPE YT PPPPEPE P+P Q TGDLVDLR++ +T DDQGNK ALALFAGPAANN NG+WEAFPSNGEPEVTSAWQNPAA++ KADWELAL E+AS+LS QKAAMGGG+DPLLLNGMYDQG+VRQH S+AQ GGS+SSVALPG G+S TPVLALPAPDGT+Q VG DPFAASLS+PPP+YVQMA++EKKQ LLVQEQ+VWQ+YA+ GMQGQ+SL+KI+ GGY PP MPYGMPP NG+G PPPG Y Y
Sbjct: 1 MAPTTIRKAIGAVKDQTSIGIAKVASNMAPELEVAIVKATSHDDDPASEKYIREILHLTSYSHGYVSACVVAVSKRLGKTRDWIVALKCLMLIHRLLNDGDAVFQQEIMYATRRGTRLLNLSDFRDEAHSNSWDHSAFVRTYALYLDQRLELMVYERKQSG--NGHEIERFRGRDDGRDYRSPPGSNRGYDYNEFRDE-PN----YGMRRSRSSGDVRESTQQKKDATPLREMTPERVLGKMGHLQRLLDRFLSCRPTGLAKNERMILVALYSIVKESFKLYTDVCEVLAVLLDKFFDMEYQDCVKAFDAYASAAKQIDELVRFYNWCKDIGVARSSEYPEVQMITSKLLETLEEFVRDRAKALKSPDRKVESQPEPQKEEPVQDMNEVKALPAPENYTPPPPPEPEPPKPAV-QETGDLVDLRDERVTADDQGNKLALALFAGPAANN--GNGSWEAFPSNGEPEVTSAWQNPAADTSKADWELALAESASHLSKQKAAMGGGLDPLLLNGMYDQGMVRQHTSTAQLSGGSASSVALPGPGESKTPVLALPAPDGTLQAVGQDPFAASLSVPPPAYVQMADMEKKQHLLVQEQVVWQRYAQNGMQGQSSLAKISSGGYAPGVGGPPVMPYGMPPANGVGIPPPGYSYAPY 641
BLAST of XM_017374472.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834HC12 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7151223.1}))
HSP 1 Score: 978.008 bits (2527), Expect = 0.000e+0
Identity = 499/650 (76.77%), Postives = 557/650 (85.69%), Query Frame = 0
Match: A0A834HC12 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7151223.1}))
HSP 1 Score: 978.008 bits (2527), Expect = 0.000e+0
Identity = 499/650 (76.77%), Postives = 557/650 (85.69%), Query Frame = 0
Query: 1 MSTSSIRKAIGAVKDQTSIGIAKVASNEAPELEVAIVKATSHDDDPADEKYIQRILQLTSYSRGYVSVCVAKLSKRLGKTRDWIVALKSLILVHRLLNGGDLVFQQEIMFTTRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRLEMIVYERKQSGGSN----------GGEIQKWRSPPNNRGYEYDNYESRGPNGYGSQGMRRARSFEDVRESEAGKKAV-TPLREMTPERIFGKMSHLQRLLDRLLSCRPTGLAKNNRMVLVALYPIVRESFKLYADICEVLAVLLDRFFDMEYNDCVKAFDAYTSAAKQIDELVSFYNWCKDTGVARSSEYPEVQMITGKLLETLEEFVRDRAKAMKTPERKVEPAPVVQEEEPVPDMNEIKALPA-PETYTAPPPPEPEAPQPPKPQVTGDLVDLREDTMTPDDQGNKFALALFAGPAANNKSTNGNWEAFPSNGEPEVTSAWQNPAAESGKADWELALVETASNLSNQKAAMGGGMDPLLLNGMYDQGVVRQHVSSAQFGGGSSSSVALPGMGKSATPVLALPAPDGTVQTVGGDPFAASLSIPPPSYVQMAEIEKKQQLLVQEQMVWQQYAREGMQGQTSLSKINGGGYYPPAM----PYGMPPVNGMGYPPPGQYYN 634
M+ S+IRKAIGAVKDQTSIGIAKV+SN APELEVAIVKATSHDD+PAD+KY++ IL LTSYSRGYV+ CVA +SKRLGKTRDWIVALK+LILVHRLL GD VF QEIM+ TR+GTRLLNMSDFRDEAHS+SWD+SAFVRT+A++LDQ+LE+++YERKQSGG G ++WRSPPN RGYEYDN+ESR + YG GMRR RS DVRE+E V TPLR+M PERIFGKM HLQRLLDRLL+CRPTG+AKN+RMVLVALYP+V+ESFKLYADICEVLAVLLDRFFDMEY+DCVKAFDAY SAAKQIDELV+FYNWCKDTGVARSSE+PEVQ ITGKLLETLEEFVRDRAKA K+PERKVE V +EEEPVPDMNEIKALPA PPPP P+ Q TGDLVDLRE+ +T DDQGN+ ALALFAGPA N NG+WEAFPSNGEPEV SAW NPAAESGKADWELALVE+ASNLS QKAA+GGG DPLLLNG+YDQG+VRQHVS+AQ GGS+SSVALP GKSATPVLALPAPDGTVQTVGGDPFAASLSIPPP+YVQM+++EKKQQ LVQEQ+VWQQYAR+GMQGQTSL+KI+GGGYY P + PYGMPP+NGMG PP G YY
Sbjct: 1 MAPSTIRKAIGAVKDQTSIGIAKVSSNMAPELEVAIVKATSHDDEPADDKYLREILHLTSYSRGYVAACVAAVSKRLGKTRDWIVALKTLILVHRLLADGDPVFHQEIMYATRRGTRLLNMSDFRDEAHSNSWDNSAFVRTYALFLDQKLELMLYERKQSGGGGGGGGGELERYGSREERWRSPPN-RGYEYDNFESR-EDSYGGGGMRRVRSSGDVRENERRDVVVITPLRDMKPERIFGKMGHLQRLLDRLLACRPTGMAKNSRMVLVALYPVVKESFKLYADICEVLAVLLDRFFDMEYSDCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEFPEVQRITGKLLETLEEFVRDRAKAGKSPERKVEQPVVKEEEEPVPDMNEIKALPAPENYTPTPPPPPEPEAPKPQKQETGDLVDLREEAITADDQGNRLALALFAGPATNK--GNGSWEAFPSNGEPEVNSAWDNPAAESGKADWELALVESASNLSKQKAALGGGFDPLLLNGIYDQGIVRQHVSTAQLSGGSASSVALPAAGKSATPVLALPAPDGTVQTVGGDPFAASLSIPPPAYVQMSDMEKKQQFLVQEQVVWQQYARDGMQGQTSLTKISGGGYYTPGVQPMMPYGMPPMNGMGVPPAGYYYT 646
BLAST of XM_017374472.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4DJ27 (ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942})
HSP 1 Score: 975.311 bits (2520), Expect = 0.000e+0
Identity = 509/652 (78.07%), Postives = 567/652 (86.96%), Query Frame = 0
Match: A0A4S4DJ27 (ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942})
HSP 1 Score: 975.311 bits (2520), Expect = 0.000e+0
Identity = 509/652 (78.07%), Postives = 567/652 (86.96%), Query Frame = 0
Query: 1 MSTSSIRKAIGAVKDQTSIGIAKVASNEAPELEVAIVKATSHDDDPADEKYIQRILQLTSYSRGYVSVCVAKLSKRLGKTRDWIVALKSLILVHRLLNGGDLVFQQEIMFTTRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRLEMIVYERKQSGGSN------------GGEIQKWRSPPNNRGYEYDNYESRGPNGYGSQGMRRARSFEDVRESEAG-KKAVTPLREMTPERIFGKMSHLQRLLDRLLSCRPTGLAKNNRMVLVALYPIVRESFKLYADICEVLAVLLDRFFDMEYNDCVKAFDAYTSAAKQIDELVSFYNWCKDTGVARSSEYPEVQMITGKLLETLEEFVRDRAKAMKTPERKVEPAPVVQEEEPVPDMNEIKALPAPETYTAPPPPEPEAPQPPKPQVTGDLVDLREDTMTPDDQGNKFALALFAGPAANNKSTNGNWEAFPSNGEPEVTSAWQNPAAESGKADWELALVETASNLSNQKAAMGGGMDPLLLNGMYDQGVVRQHVSSAQFGGGSSSSVALPGMGKSATPVLALPAPDGTVQTVGGDPFAASLSIPPPSYVQMAEIEKKQQLLVQEQMVWQQYAREGMQGQTSLSKINGGGYYPPAM-----PYGMPPVNGMGYPPPGQYYN 634
M+ S+IRKAIGAVKDQTSIGIAKVA N AP+LEVAIVKATSHDD+PADEKYI+ ILQLTSYSRGYVS CVA +SKRLGKTRDWIVALKSLI+VHRLL+ G+ VFQQEI + TR+GTRLLNMSDFRDEAHS+SWDHSAFVR++A+YLDQ+LE+I+YERKQSGG++ G ++WRSPPN R YEYD E R GYG+ GMRR+RSF DVRE+ KK VTPLR+M+PERIFGKM HLQRLLDRLL+CRPTG+AKN RMVLVALYPI+RESFKLYADICEVLAVLLDRFFDMEY+DCVKAFDAY SAAKQIDELV FYNWC D G+ARSSEYPEVQ ITGKLLETLEEFVRDRAKA+K+PERKVE PVV +EEPV DMNEIKALPAPE YT PPPPEPE P+P K Q GDLVDLR++ ++ DDQGN+FALALFAGP A N NG+WEAFPSNGEPEVTSAWQ PAAE+GKADWELALVE+AS+LSNQKA MGGG+DPLLLNGMYDQG+VRQHVS+AQ GGS+SSVALPG GKSATPVLALPAPDGTVQTVG DPFAAS IPPP YVQMA++EKKQQLLVQEQ+VWQQYA +GMQGQTSL+KI+GGGYY P + PYGMPPVNG+G PPPG Y+
Sbjct: 1 MAPSTIRKAIGAVKDQTSIGIAKVAGNLAPDLEVAIVKATSHDDEPADEKYIREILQLTSYSRGYVSACVASVSKRLGKTRDWIVALKSLIVVHRLLSDGEPVFQQEITYATRRGTRLLNMSDFRDEAHSNSWDHSAFVRSYALYLDQKLELILYERKQSGGASGSGSGGSEIERYGSREERWRSPPN-RAYEYDYNEFRDEPGYGNYGMRRSRSFGDVRETSGEEKKDVTPLRDMSPERIFGKMGHLQRLLDRLLACRPTGMAKNGRMVLVALYPILRESFKLYADICEVLAVLLDRFFDMEYSDCVKAFDAYVSAAKQIDELVGFYNWCTDIGLARSSEYPEVQRITGKLLETLEEFVRDRAKALKSPERKVE-QPVVAQEEPVQDMNEIKALPAPENYTPPPPPEPELPKPQKQQEAGDLVDLRDEALSADDQGNRFALALFAGPVAKN--GNGSWEAFPSNGEPEVTSAWQTPAAETGKADWELALVESASHLSNQKAMMGGGLDPLLLNGMYDQGMVRQHVSNAQLSGGSASSVALPGPGKSATPVLALPAPDGTVQTVGQDPFAASSFIPPPPYVQMADMEKKQQLLVQEQIVWQQYASQGMQGQTSLAKISGGGYYAPGVQPMMMPYGMPPVNGVGLPPPGYYHT 648
BLAST of XM_017374472.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7GS33 (ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942})
HSP 1 Score: 975.311 bits (2520), Expect = 0.000e+0
Identity = 508/652 (77.91%), Postives = 567/652 (86.96%), Query Frame = 0
Match: A0A7J7GS33 (ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942})
HSP 1 Score: 975.311 bits (2520), Expect = 0.000e+0
Identity = 508/652 (77.91%), Postives = 567/652 (86.96%), Query Frame = 0
Query: 1 MSTSSIRKAIGAVKDQTSIGIAKVASNEAPELEVAIVKATSHDDDPADEKYIQRILQLTSYSRGYVSVCVAKLSKRLGKTRDWIVALKSLILVHRLLNGGDLVFQQEIMFTTRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRLEMIVYERKQSGGSN------------GGEIQKWRSPPNNRGYEYDNYESRGPNGYGSQGMRRARSFEDVRESEAG-KKAVTPLREMTPERIFGKMSHLQRLLDRLLSCRPTGLAKNNRMVLVALYPIVRESFKLYADICEVLAVLLDRFFDMEYNDCVKAFDAYTSAAKQIDELVSFYNWCKDTGVARSSEYPEVQMITGKLLETLEEFVRDRAKAMKTPERKVEPAPVVQEEEPVPDMNEIKALPAPETYTAPPPPEPEAPQPPKPQVTGDLVDLREDTMTPDDQGNKFALALFAGPAANNKSTNGNWEAFPSNGEPEVTSAWQNPAAESGKADWELALVETASNLSNQKAAMGGGMDPLLLNGMYDQGVVRQHVSSAQFGGGSSSSVALPGMGKSATPVLALPAPDGTVQTVGGDPFAASLSIPPPSYVQMAEIEKKQQLLVQEQMVWQQYAREGMQGQTSLSKINGGGYYPPAM-----PYGMPPVNGMGYPPPGQYYN 634
M+ S+IRKAIGAVKDQTSIGIAKVA N AP+LEVAIVKATSHDD+P DEKYI+ ILQLTSYSRGYVS CVA +SKRLGKTRDWIVALKSLI+VHRLL+ G+ VFQQEI + TR+GTRLLNMSDFRDEAHS+SWDHSAFVR++A+YLDQ+LE+I+YERKQSGG++ G ++WRSPPN R YEYD E R GYG+ GMRR+RSF DVRE+ KK VTPLR+M+PERIFGKM HLQRLLDRLL+CRPTG+AKN RMVLVALYPI++ESFKLYADICEVLAVLLDRFFDMEY+DCVKAFDAY SAAKQIDELV FYNWC D G+ARSSEYPEVQ ITGKLLETLEEFVRDRAKA+K+PERKVE PVV +EEPV DMNEIKALPAPE YT PPPPEPE P+P K Q GDLVDLR++ ++ DDQGN+FALALFAGP A N NG+WEAFPSNGEPEVTSAWQ PAAE+GKADWELALVE+AS+LSNQKA MGGG+DPLLLNGMYDQG+VRQHVS+AQ GGS+SSVALPG GKSATPVLALPAPDGTVQTVG DPFAAS IPPPSYVQMA++EKKQQLLVQEQ+VWQQYA +GMQGQTSL+KI+GGGYY P + PYGMPPVNG+G PPPG Y+
Sbjct: 1 MAPSTIRKAIGAVKDQTSIGIAKVAGNLAPDLEVAIVKATSHDDEPTDEKYIREILQLTSYSRGYVSACVASVSKRLGKTRDWIVALKSLIVVHRLLSDGEPVFQQEITYATRRGTRLLNMSDFRDEAHSNSWDHSAFVRSYALYLDQKLELILYERKQSGGASGSGSGGSEIERYGSREERWRSPPN-RAYEYDYNEFRDEPGYGNYGMRRSRSFGDVRETSGEEKKDVTPLRDMSPERIFGKMGHLQRLLDRLLACRPTGMAKNGRMVLVALYPILKESFKLYADICEVLAVLLDRFFDMEYSDCVKAFDAYVSAAKQIDELVGFYNWCTDIGLARSSEYPEVQRITGKLLETLEEFVRDRAKALKSPERKVE-QPVVAQEEPVQDMNEIKALPAPENYTPPPPPEPELPKPQKQQEAGDLVDLRDEALSADDQGNRFALALFAGPVAKN--GNGSWEAFPSNGEPEVTSAWQTPAAETGKADWELALVESASHLSNQKAMMGGGLDPLLLNGMYDQGMVRQHVSNAQLSGGSASSVALPGPGKSATPVLALPAPDGTVQTVGQDPFAASSFIPPPSYVQMADMEKKQQLLVQEQIVWQQYASQGMQGQTSLAKISGGGYYAPGVQPMMMPYGMPPVNGVGLPPPGYYHT 648
BLAST of XM_017374472.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4D9C6B7 (ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942})
HSP 1 Score: 968.763 bits (2503), Expect = 0.000e+0
Identity = 500/650 (76.92%), Postives = 543/650 (83.54%), Query Frame = 0
Match: A0A4D9C6B7 (ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942})
HSP 1 Score: 968.763 bits (2503), Expect = 0.000e+0
Identity = 500/650 (76.92%), Postives = 543/650 (83.54%), Query Frame = 0
Query: 1 MSTSSIRKAIGAVKDQTSIGIAKVASNEAPELEVAIVKATSHDDDPADEKYIQRILQLTSYSRGYVSVCVAKLSKRLGKTRDWIVALKSLILVHRLLNGGDLVFQQEIMFTTRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRLEMIVYERKQSGGSNGGEIQ---------KWRSPP--NNRGYEYDNYESRGPNGYGSQGMRRARSFEDVRESEAGKKAVTPLREMTPERIFGKMSHLQRLLDRLLSCRPTGLAKNNRMVLVALYPIVRESFKLYADICEVLAVLLDRFFDMEYNDCVKAFDAYTSAAKQIDELVSFYNWCKDTGVARSSEYPEVQMITGKLLETLEEFVRDRAKAMKTPERKVE--PAPVVQEEEPVPDMNEIKALPAPETYTAPPPPEPEAPQPPKPQVTGDLVDLREDTMTPDDQGNKFALALFAGPAANNKSTNGNWEAFPSNGEPEVTSAWQNPAAESGKADWELALVETASNLSNQKAAMGGGMDPLLLNGMYDQGVVRQHVSSAQFGGGSSSSVALPGMGKSATPVLALPAPDGTVQTVGGDPFAASLSIPPPSYVQMAEIEKKQQLLVQEQMVWQQYAREGMQGQTSLSKINGGGYYPPA----MPYGMPPVNGMGYPPPGQYY 633
M+ S+IRKAIGAVKDQTSIGIAKVASN APELEVAIVKATSHDDDPA EKYI+ ILQLTS+SRGYVS CV +SKRLGKTRDWIVALK LIL+HRLLN GD VFQQEIM+ TR+GTRLLNMSDFRDEAHSSSWDHSAFVRT+A+YLDQRLEM++YERKQSG NGGE++ +RSPP N GYEY + P GMRR+RS DVRES +K TPLR+M PERIFGKM HLQRLLDR LSCRPTGLAKN RM+LVALY IV+ESFKLYADICEVLAVLLDRFFDMEY DCVKAFDAY S+AKQIDELV FYNWCKD GV+RSS+YPEVQ ITGKLLETLEEFVRDRAKAMK+PERKVE PAP V EEEPV DMNEIKALP PE PPP P P Q TGDL+DLR++ ++ DDQGNKFALALFAGP ANN NG+WEAF SNGE E+TSAWQNPAAE+GKADWELALVETAS+LS QKAAMGGG+DPLLLNGMYDQG+VRQHVS+A GGS+SSVALPG G S TPVLALPAPDGTVQ VG DPFAASLSI PPSYVQMA++EKKQQLLVQEQMVWQQY R+GMQGQ SL+KI GGYY P MPYGMPPVNG+G PP G YY
Sbjct: 1 MAPSTIRKAIGAVKDQTSIGIAKVASNMAPELEVAIVKATSHDDDPALEKYIREILQLTSFSRGYVSACVVAVSKRLGKTRDWIVALKCLILIHRLLNEGDAVFQQEIMYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYALYLDQRLEMMIYERKQSG--NGGEMETSGARDDRYNYRSPPESNRGGYEYSHEYREEP-----YGMRRSRSSGDVRESTQERKDATPLRDMAPERIFGKMGHLQRLLDRFLSCRPTGLAKNERMILVALYTIVKESFKLYADICEVLAVLLDRFFDMEYQDCVKAFDAYASSAKQIDELVGFYNWCKDIGVSRSSDYPEVQKITGKLLETLEEFVRDRAKAMKSPERKVEALPAPPV-EEEPVQDMNEIKALPPPED-YTPPPQPEPLPPKPAVQETGDLLDLRDEGVSADDQGNKFALALFAGPVANN--GNGSWEAFHSNGESEMTSAWQNPAAETGKADWELALVETASHLSKQKAAMGGGLDPLLLNGMYDQGMVRQHVSTAHLSGGSASSVALPGPGASKTPVLALPAPDGTVQAVGLDPFAASLSIAPPSYVQMADMEKKQQLLVQEQMVWQQYHRDGMQGQASLNKIGAGGYYAPGIQPPMPYGMPPVNGVGVPPAGGYY 639
BLAST of XM_017374472.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4D8YBX9 (ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942})
HSP 1 Score: 967.607 bits (2500), Expect = 0.000e+0
Identity = 499/650 (76.77%), Postives = 543/650 (83.54%), Query Frame = 0
Match: A0A4D8YBX9 (ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942})
HSP 1 Score: 967.607 bits (2500), Expect = 0.000e+0
Identity = 499/650 (76.77%), Postives = 543/650 (83.54%), Query Frame = 0
Query: 1 MSTSSIRKAIGAVKDQTSIGIAKVASNEAPELEVAIVKATSHDDDPADEKYIQRILQLTSYSRGYVSVCVAKLSKRLGKTRDWIVALKSLILVHRLLNGGDLVFQQEIMFTTRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRLEMIVYERKQSGGSNGGEIQ---------KWRSPP--NNRGYEYDNYESRGPNGYGSQGMRRARSFEDVRESEAGKKAVTPLREMTPERIFGKMSHLQRLLDRLLSCRPTGLAKNNRMVLVALYPIVRESFKLYADICEVLAVLLDRFFDMEYNDCVKAFDAYTSAAKQIDELVSFYNWCKDTGVARSSEYPEVQMITGKLLETLEEFVRDRAKAMKTPERKVE--PAPVVQEEEPVPDMNEIKALPAPETYTAPPPPEPEAPQPPKPQVTGDLVDLREDTMTPDDQGNKFALALFAGPAANNKSTNGNWEAFPSNGEPEVTSAWQNPAAESGKADWELALVETASNLSNQKAAMGGGMDPLLLNGMYDQGVVRQHVSSAQFGGGSSSSVALPGMGKSATPVLALPAPDGTVQTVGGDPFAASLSIPPPSYVQMAEIEKKQQLLVQEQMVWQQYAREGMQGQTSLSKINGGGYYPPA----MPYGMPPVNGMGYPPPGQYY 633
M+ S+IRKAIGAVKDQTSIGIAKVASN APELEVAIVKATSHDDDPA EKYI+ ILQLTS+SRGYVS CV +SKRLGKTRDWIVALK L+L+HRLLN GD VFQQEIM+ TR+GTRLLNMSDFRDEAHSSSWDHSAFVRT+A+YLDQRLEM++YERKQSG NGGE++ +RSPP N GYEY + P GMRR+RS DVRES +K TPLR+M PERIFGKM HLQRLLDR LSCRPTGLAKN RM+LVALY IV+ESFKLYADICEVLAVLLDRFFDMEY DCVKAFDAY S+AKQIDELV FYNWCKD GV+RSS+YPEVQ ITGKLLETLEEFVRDRAKAMK+PERKVE PAP V EEEPV DMNEIKALP PE PPP P P Q TGDL+DLR++ ++ DDQGNKFALALFAGP ANN NG+WEAF SNGE E+TSAWQNPAAE+GKADWELALVETAS+LS QKAAMGGG+DPLLLNGMYDQG+VRQHVS+A GGS+SSVALPG G S TPVLALPAPDGTVQ VG DPFAASLSI PPSYVQMA++EKKQQLLVQEQMVWQQY R+GMQGQ SL+KI GGYY P MPYGMPPVNG+G PP G YY
Sbjct: 1 MAPSTIRKAIGAVKDQTSIGIAKVASNMAPELEVAIVKATSHDDDPASEKYIREILQLTSFSRGYVSACVVAVSKRLGKTRDWIVALKCLMLIHRLLNEGDAVFQQEIMYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYALYLDQRLEMMIYERKQSG--NGGEMETSGARDDRYNYRSPPESNRGGYEYSHEYREEP-----YGMRRSRSSGDVRESTQERKDATPLRDMAPERIFGKMGHLQRLLDRFLSCRPTGLAKNERMILVALYTIVKESFKLYADICEVLAVLLDRFFDMEYQDCVKAFDAYASSAKQIDELVGFYNWCKDIGVSRSSDYPEVQKITGKLLETLEEFVRDRAKAMKSPERKVEALPAPPV-EEEPVQDMNEIKALPPPED-YTPPPQPEPLPPKPAVQETGDLLDLRDEGVSADDQGNKFALALFAGPVANN--GNGSWEAFHSNGESEMTSAWQNPAAETGKADWELALVETASHLSKQKAAMGGGLDPLLLNGMYDQGMVRQHVSTAHLIGGSASSVALPGPGASKTPVLALPAPDGTVQAVGLDPFAASLSIAPPSYVQMADMEKKQQLLVQEQMVWQQYHRDGMQGQASLNKIGAGGYYAPGVQPPMPYGMPPVNGVGVPPAGGYY 639
BLAST of XM_017374472.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4D9BSH4 (ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942})
HSP 1 Score: 965.681 bits (2495), Expect = 0.000e+0
Identity = 498/653 (76.26%), Postives = 551/653 (84.38%), Query Frame = 0
Match: A0A4D9BSH4 (ENTH domain-containing protein {ECO:0000259|PROSITE:PS50942})
HSP 1 Score: 965.681 bits (2495), Expect = 0.000e+0
Identity = 498/653 (76.26%), Postives = 551/653 (84.38%), Query Frame = 0
Query: 1 MSTSSIRKAIGAVKDQTSIGIAKVASNEAPELEVAIVKATSHDDDPADEKYIQRILQLTSYSRGYVSVCVAKLSKRLGKTRDWIVALKSLILVHRLLNGGDLVFQQEIMFTTRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRLEMIVYERKQSGGSNGGEIQK---------WRSPP--NNRGYEYDNYESRGPNGYGSQGMRRARSFEDVRESEAGKKAVTPLREMTPERIFGKMSHLQRLLDRLLSCRPTGLAKNNRMVLVALYPIVRESFKLYADICEVLAVLLDRFFDMEYNDCVKAFDAYTSAAKQIDELVSFYNWCKDTGVARSSEYPEVQMITGKLLETLEEFVRDRAKAMKTPERKVE--PAPVVQEEEPVPDMNEIKALPAPETYTAPPPPEPEAPQPPKPQVTGDLVDLREDTMTPDDQGNKFALALFAGPAANNKSTNGNWEAFPSNGEPEVTSAWQNPAAESGKADWELALVETASNLSNQKAAMGGGMDPLLLNGMYDQGVVRQHVSSAQFGGGSSSSVALPGMGKSATPVLALPAPDGTVQTVGGDPFAASLSIPPPSYVQMAEIEKKQQLLVQEQMVWQQYAREGMQGQTSLSKINGGGYYPPA----MPYGMPPVNGMGYPPPGQYYNQY 636
M+ S+IRKAIGAVKDQTSIGIAKVASN APELEVAIVKATSHDDDPA EKYI+ ILQLTS+SRGYVS CV +SKRLGKTRDWIVALK L+L+HRLLN GD VFQQEIM+ TR+GTRLLNMSDFRDEAHSSSWDHSAFVRT+A+YLDQRLEM++YERKQSG NGG++++ +RSPP N GYEY + P GMRR+RS DVRE+ +K TPLR+M PERIFGKM HLQRLLDR L CRPTGLAKN RM+LVALY IV+ESFKLYADICEVLA+LLD+FFDMEY DCVKAFDAY+S+AKQIDELV FYNWCKD GV+RSS+YPEVQ ITGKLLETLEEFVRDRAKAMK+PERKVE PAP V EEEPVPDMNEIKALP PE +T PP PEP+ P+P Q +GDL+DLR++ ++ DDQGNKFALALFAGP NN NG+WEAF NGE EVTSAWQNPAAE+GKADWELALVETAS+LS QKAAMGGG+DPLLLNGMYDQG+VRQHVS+A GGS+SSVALPG G S TPVLALPAPDGTVQ VG DPFAASLSI PPSYVQMA++EKKQQLLVQEQMVWQQY R+GMQGQTSL+KI GGYY P MPYGMPPVNG+G PP G YY Y
Sbjct: 20 MAPSTIRKAIGAVKDQTSIGIAKVASNMAPELEVAIVKATSHDDDPASEKYIREILQLTSFSRGYVSACVVAVSKRLGKTRDWIVALKCLMLIHRLLNEGDAVFQQEIMYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYALYLDQRLEMMIYERKQSG--NGGDMERSGARDDRYNYRSPPESNRGGYEYSHEYREEP-----YGMRRSRSSGDVREATQERKDATPLRDMAPERIFGKMGHLQRLLDRFLCCRPTGLAKNERMILVALYTIVKESFKLYADICEVLAMLLDKFFDMEYQDCVKAFDAYSSSAKQIDELVGFYNWCKDIGVSRSSDYPEVQKITGKLLETLEEFVRDRAKAMKSPERKVEALPAPPV-EEEPVPDMNEIKALPPPEDHTPPPQPEPQPPKPAV-QESGDLLDLRDEGVSADDQGNKFALALFAGPVVNN--GNGSWEAFHPNGESEVTSAWQNPAAETGKADWELALVETASHLSKQKAAMGGGLDPLLLNGMYDQGMVRQHVSTAHLSGGSASSVALPGPGASKTPVLALPAPDGTVQAVGQDPFAASLSIAPPSYVQMADMEKKQQLLVQEQMVWQQYHRDGMQGQTSLNKIGAGGYYAPGVQPPMPYGMPPVNGVGVPPAGYYYTPY 661
BLAST of XM_017374472.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4U5QK35 ((Clathrin assembly family protein {ECO:0000313|EMBL:TKS11082.1}))
HSP 1 Score: 964.911 bits (2493), Expect = 0.000e+0
Identity = 499/677 (73.71%), Postives = 550/677 (81.24%), Query Frame = 0
Match: A0A4U5QK35 ((Clathrin assembly family protein {ECO:0000313|EMBL:TKS11082.1}))
HSP 1 Score: 964.911 bits (2493), Expect = 0.000e+0
Identity = 499/677 (73.71%), Postives = 550/677 (81.24%), Query Frame = 0
Query: 1 MSTSSIRKAIGAVKDQTSIGIAKVASNEAPELEVAIVKATSHDDDPADEKYIQRILQLTSYSRGYVSVCVAKLSKRLGKTRDWIVALKSLILVHRLLNGGDLVFQQEIMFTTRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRLEMIVYERKQSGGS-----------NGGEIQK-----------------WRSPPNNRGYEY-DNYE---SRGPNGYGSQGMRRARSFEDVRESEAG-----KKAVTPLREMTPERIFGKMSHLQRLLDRLLSCRPTGLAKNNRMVLVALYPIVRESFKLYADICEVLAVLLDRFFDMEYNDCVKAFDAYTSAAKQIDELVSFYNWCKDTGVARSSEYPEVQMITGKLLETLEEFVRDRAKAMKTPERKVEPAPVVQEEEPVPDMNEIKALPAPETYTAPPPPEPEAPQPPKPQVTGDLVDLREDTMTPDDQGNKFALALFAGPAANNKSTNGNWEAFPSNGEPEVTSAWQNPAAESGKADWELALVETASNLSNQKAAMGGGMDPLLLNGMYDQGVVRQHVSSAQFGGGSSSSVALPGMGKSATPVLALPAPDGTVQTVGGDPFAASLSIPPPSYVQMAEIEKKQQLLVQEQMVWQQYAREGMQGQTSLSKINGGGYYP----PAMPYGMPPVNGMGYPPPGQYYNQY 636
M+ S+IRKAIG VKDQTSIGIAKVASN APELEVAIVKATSHDDDP ++KYI IL LTSYSRGYV CV+ +SKRLGKTRDWIVALK+L+L+HRLLN GD +FQ+EI++ TRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRLE+I++ERK GS +GGEI+K +RSPP R YEY D Y +RG +GYG RR RS+ D+ E G KK TPLREM PERIFGKM HLQRLLDR LSCRPTGLAKNNRM+L+ALYP+V+ESF+LYADICEVLAVLLD+FFDMEY DCVKAFDAY SAAKQIDEL++FYNWCKDTGVARSSEYPEVQ ITGKLLETLEEFVRDRAK K+PERK E PV QEEEPVPDMNEIKALPAPE +T PPP P P KPQVT DLV+LR+D +T DDQGN+ ALALFAGPAAN S NG+WEAF SNGEP+VTSAWQ PAAE+GKADWELALVETASNLS QKA +GGG DPLLLNGMYDQG+VRQHV +AQ GGS+SSVALPG G S TPVLALPAPDGTVQ V DPFAASL +PPPSYVQMA++EKKQQLLVQEQ+ WQQYAR+GMQGQ SL+KI+GGGYY P MPYGMPPVNGMG PP G YY Y
Sbjct: 1 MAPSTIRKAIGTVKDQTSIGIAKVASNMAPELEVAIVKATSHDDDPPNQKYIHEILNLTSYSRGYVHACVSFVSKRLGKTRDWIVALKTLMLIHRLLNEGDPLFQEEILYATRKGTRLLNMSDFRDEAHSSSWDHSAFVRTFAMYLDQRLELILFERKGGDGSRVGGSRGAGSAHGGEIEKYYGGRGGFGREDFGRGDFRSPPP-RAYEYSDQYNGDYNRGESGYGMP--RRTRSYGDMSEMGGGEGREEKKTATPLREMKPERIFGKMGHLQRLLDRFLSCRPTGLAKNNRMILIALYPVVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELIAFYNWCKDTGVARSSEYPEVQRITGKLLETLEEFVRDRAKRPKSPERKEEAPPVPQEEEPVPDMNEIKALPAPEDFTP-PPPPEMEPGPQKPQVTEDLVNLRDDDVTADDQGNRLALALFAGPAAN--SGNGSWEAFHSNGEPQVTSAWQTPAAEAGKADWELALVETASNLSKQKATLGGGFDPLLLNGMYDQGMVRQHVGTAQLSGGSASSVALPGTGNSTTPVLALPAPDGTVQAVNQDPFAASLCVPPPSYVQMADMEKKQQLLVQEQVTWQQYARDGMQGQASLAKISGGGYYNAGPMPTMPYGMPPVNGMGPPPAGYYYTPY 671
| Match Name | Stats | Description |
|---|---|---|
| A0A6A4L3V5 | E-Value: 0.000e+0, PID: 77.35 | ENTH domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A6I9TFB5 | E-Value: 0.000e+0, PID: 77.88 | (putative clathrin assembly protein At2g25430 {ECO... [more] |
| A0A2G9I2H8 | E-Value: 0.000e+0, PID: 75.88 | (Clathrin assembly protein AP180 {ECO:0000313|EMBL... [more] |
| A0A834HC12 | E-Value: 0.000e+0, PID: 76.77 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7151... [more] |
| A0A4S4DJ27 | E-Value: 0.000e+0, PID: 78.07 | ENTH domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A7J7GS33 | E-Value: 0.000e+0, PID: 77.91 | ENTH domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A4D9C6B7 | E-Value: 0.000e+0, PID: 76.92 | ENTH domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A4D8YBX9 | E-Value: 0.000e+0, PID: 76.77 | ENTH domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A4D9BSH4 | E-Value: 0.000e+0, PID: 76.26 | ENTH domain-containing protein {ECO:0000259|PROSIT... [more] |
| A0A4U5QK35 | E-Value: 0.000e+0, PID: 73.71 | (Clathrin assembly family protein {ECO:0000313|EMB... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |