Resource Type:
Polypeptide
Name:
XM_017373861.1
Identifier:
XM_017373861.1-protein
Sequence:
MEMQETSRNEHKGNITSDNTLDWRGRPSNPKLHGGMKAASFVLGVQAFEI
MGIAAVGNNLITYVLNEMHYSLSRSANIVTNFIGTLFILALLGGFLSDSY
LGCFWTMLIFGFLELSGFILLSVQAHLPQLKPPRCNMLVDGDNCVEARGL
KAFIFFVALYLVALGSGCMKPNMISHGADQFNKDDTKQSKKLSTYFNAAY
FAFSLGELVALTLLVWLQTHSGMDVGFGVSAAAMGLGLISLVCGTLFYKN
RPPQGSVLTPIAQVFVAAYYKRNKVCPSNPQLLHGGGSGVPNTNTIMSSD
VGHSQCTTRFRFLDKACIKMEEGSNISTESPWKLCTINQVEQVKTLITVI
PIFACTIIFNTTLAQLQTFSVQQGSSMNSKLTTSFHIPPASLQAIPYIIL
IFLVPIYDTFFVPLARKITGHESGISPLKRIGLGLFVATFSMVAAAVMEH
KRRVAAVKYNEIISIFWITPQYLIFGLSEMFTAIGLIEFFYKQKIKGMQS
FLTAMTYCSYSFGFYLSSVLVSLVNKITSTSSNHGWLAENDLNNDRLDLF
YWLLAGLSFINFLNYLFWAKWYSDSPSASDTISHYSDCNTAKVAGDNTTV
Sequence Length:
600
Sequence Checksum:
0795dc0aad7f3d8e71b1d20d797a7ff9
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017373861.1, derives from mRNA, XM_017373861.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017373861.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017373861.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7C1R3 ((Uncharacterized protein {ECO:0000313|EMBL:MPA74857.1}) (Fragment))
HSP 1 Score: 956.051 bits (2470), Expect = 0.000e+0
Identity = 462/615 (75.12%), Postives = 536/615 (87.15%), Query Frame = 0
Match: A0A5B7C1R3 ((Uncharacterized protein {ECO:0000313|EMBL:MPA74857.1}) (Fragment))
HSP 1 Score: 956.051 bits (2470), Expect = 0.000e+0
Identity = 462/615 (75.12%), Postives = 536/615 (87.15%), Query Frame = 0
Query: 1 MEMQETSRNE----HKGNIT----SDNTLDWRGRPSNPKLHGGMKAASFVLGVQAFEIMGIAAVGNNLITYVLNEMHYSLSRSANIVTNFIGTLFILALLGGFLSDSYLGCFWTMLIFGFLELSGFILLSVQAHLPQLKPPRCNMLVDGDNCVEARGLKAFIFFVALYLVALGSGCMKPNMISHGADQFNKDDTKQSKKLSTYFNAAYFAFSLGELVALTLLVWLQTHSGMDVGFGVSAAAMGLGLISLVCGTLFYKNRPPQGSVLTPIAQVFVAAYYKRNKVCPSNPQLLHGGGSGVPNTNTIMSSDVGHSQCTTRFRFLDKACIKMEEGSNISTESPWKLCTINQVEQVKTLITVIPIFACTIIFNTTLAQLQTFSVQQGSSMNSKLTTSFHIPPASLQAIPYIILIFLVPIYDTFFVPLARKITGHESGISPLKRIGLGLFVATFSMVAAAVMEHKRRVAAVKYNEIISIFWITPQYLIFGLSEMFTAIGLIEFFYKQKIKGMQSFLTAMTYCSYSFGFYLSSVLVSLVNKITSTSSNHGWLAENDLNNDRLDLFYWLLAGLSFINFLNYLFWAKWYSDSP---------SASDTISHYSDCNTAKVAGDNT 598
+EM SR + +KG T + T+DWRGRPSN HGGM AA+FVLG+QAFEIMGIAAVGNNLITYV+NEMH+SLS SANIVTNFIGT+FILAL GG+LSDSYLGCFWTMLIFGF+ELSGFILLSVQAHLPQLKPP+CNM +GD+C+EA+G KA IFFVALYLVALGSGC+KPNMISHGADQFNKDD KQSKKLS+YFNAAYFAFS+GELVALT+LVW+QTHSGMD+GFGVSAAAM +GLISLVCGTL Y+N+PPQGS+ TPIAQVFVAA KR +VCPS+PQ+L+G + VPN+N MSS+VG T RFR LDKACI++++G+N + ESPW+LCT+ QVEQVK LI+VIPIFACTI+FNT LAQLQTFSVQQGSSMN++LT +FHIPPASLQ+IPYI+LIF+VP+YDTFFVP ARK TGH+SGI+PL+RIG GLFVATFSMV+AA+ME+KRR +AV N+I+SIFWITPQ+LIFGLSEMFTA+GLIEFFYKQ +KGMQSFLTA+TYCSYSFGFYLSSVLVSLVNKITS SS+ GWL++NDLN DRLDLFYWLLA LSF+NFLNYLFWA+WYS +P S + I+HYS N++K GD T
Sbjct: 23 IEMDVESRRQNSTNYKGGETMSEERETTVDWRGRPSNLNKHGGMTAAAFVLGLQAFEIMGIAAVGNNLITYVINEMHFSLSNSANIVTNFIGTIFILALFGGYLSDSYLGCFWTMLIFGFVELSGFILLSVQAHLPQLKPPKCNMATNGDHCLEAKGFKALIFFVALYLVALGSGCVKPNMISHGADQFNKDDPKQSKKLSSYFNAAYFAFSVGELVALTVLVWVQTHSGMDIGFGVSAAAMAMGLISLVCGTLLYRNKPPQGSIFTPIAQVFVAAILKRKQVCPSDPQMLNGSQTKVPNSNLPMSSNVGGLLHTERFRCLDKACIRIQDGNN-TKESPWRLCTVTQVEQVKILISVIPIFACTIVFNTILAQLQTFSVQQGSSMNTQLTKNFHIPPASLQSIPYILLIFVVPLYDTFFVPFARKFTGHDSGITPLQRIGFGLFVATFSMVSAALMENKRRNSAVNDNKILSIFWITPQFLIFGLSEMFTAVGLIEFFYKQSLKGMQSFLTAITYCSYSFGFYLSSVLVSLVNKITSHSSSGGWLSDNDLNKDRLDLFYWLLAALSFVNFLNYLFWARWYSYNPIVSVTPQHDSKGEDINHYS-FNSSKNNGDVT 635
BLAST of XM_017373861.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5B486 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8536627.1}))
HSP 1 Score: 948.347 bits (2450), Expect = 0.000e+0
Identity = 453/606 (74.75%), Postives = 525/606 (86.63%), Query Frame = 0
Match: A0A5J5B486 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8536627.1}))
HSP 1 Score: 948.347 bits (2450), Expect = 0.000e+0
Identity = 453/606 (74.75%), Postives = 525/606 (86.63%), Query Frame = 0
Query: 1 MEMQETSRNEHKGN--ITSDNTLDWRGRPSNPKLHGGMKAASFVLGVQAFEIMGIAAVGNNLITYVLNEMHYSLSRSANIVTNFIGTLFILALLGGFLSDSYLGCFWTMLIFGFLELSGFILLSVQAHLPQLKPPRCNMLVDGDNCVEARGLKAFIFFVALYLVALGSGCMKPNMISHGADQFNKDDTKQSKKLSTYFNAAYFAFSLGELVALTLLVWLQTHSGMDVGFGVSAAAMGLGLISLVCGTLFYKNRPPQGSVLTPIAQVFVAAYYKRNKVCPSNPQLLHGGGSGVPNTNTIMSSDVGHSQCTTRFRFLDKACIKMEEGSNISTESPWKLCTINQVEQVKTLITVIPIFACTIIFNTTLAQLQTFSVQQGSSMNSKLTTSFHIPPASLQAIPYIILIFLVPIYDTFFVPLARKITGHESGISPLKRIGLGLFVATFSMVAAAVMEHKRRVAAVKYNEIISIFWITPQYLIFGLSEMFTAIGLIEFFYKQKIKGMQSFLTAMTYCSYSFGFYLSSVLVSLVNKITSTSSNHGWLAENDLNNDRLDLFYWLLAGLSFINFLNYLFWAKWYSDSPSASDTISHYSDC--------NTAKVAGD 596
M+++ + KG ++ + T+DWRGRPSN HGG++AA+FVLG+Q FEIMGIAAVGNNLITY +NEMH+SLS+SANIVTNFIGT+FILALLGG+LSDS+LGCFWTMLIFGF+ELSGFILLSVQAHLPQLKPP+CNM DG++C+EA+G KA FFVALYLVALGSGC+KPNMISHGADQFNKDD KQSKKLS+YFNAAYFAFS+GELVALT+LVW+QTHSGMDVGFGVSAAAM +GLISLVCGTL Y+N+ P+GS+ TPIAQVFVAA KR +VCPSNPQLLHG + VP++N +SS+VG T RFRFLDKACIK+++ + ESPW+LCT+ QVEQVK L +VIPIFACTI+FNT LAQLQTFSVQQGSSMN++LT S HIPPASLQ+IPYI+LIF+VP+YDTFFVP ARK TGH+SGISPL+RIG GLF+ATFSMV+AA+ME KRR +AV NEIISIFWITPQ+LIFGLSEMFTA+GLIEFFYKQ +KGMQSFLTA+TYCSYSFGFYLSSVLVSLVNKITS SSN GWL+ENDLN D+LDLFYWLLA LS +NFLNYLFWA+W+S +P S T H S+ NT+K GD
Sbjct: 1 MDVEARRQQILKGEETMSEETTVDWRGRPSNLDKHGGIRAAAFVLGLQGFEIMGIAAVGNNLITYAINEMHFSLSKSANIVTNFIGTVFILALLGGYLSDSHLGCFWTMLIFGFVELSGFILLSVQAHLPQLKPPQCNMTTDGEHCLEAKGFKALTFFVALYLVALGSGCVKPNMISHGADQFNKDDPKQSKKLSSYFNAAYFAFSMGELVALTVLVWIQTHSGMDVGFGVSAAAMAMGLISLVCGTLLYRNKAPEGSIFTPIAQVFVAAILKRKQVCPSNPQLLHGSQNKVPHSNLSLSSNVGGVLHTQRFRFLDKACIKIQDAGADTKESPWRLCTVTQVEQVKILFSVIPIFACTIVFNTILAQLQTFSVQQGSSMNTQLTKSVHIPPASLQSIPYIMLIFIVPLYDTFFVPFARKFTGHDSGISPLQRIGFGLFLATFSMVSAALMEKKRRNSAVNDNEIISIFWITPQFLIFGLSEMFTAVGLIEFFYKQSLKGMQSFLTAITYCSYSFGFYLSSVLVSLVNKITSHSSNGGWLSENDLNKDKLDLFYWLLAALSILNFLNYLFWARWFSYNPFLSVTPQHDSNGEDINRYSFNTSKNIGD 606
BLAST of XM_017373861.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7WGB6 ((protein NRT1/ PTR FAMILY 4.3-like {ECO:0000313|RefSeq:XP_009776306.1}))
HSP 1 Score: 941.799 bits (2433), Expect = 0.000e+0
Identity = 448/594 (75.42%), Postives = 527/594 (88.72%), Query Frame = 0
Match: A0A1U7WGB6 ((protein NRT1/ PTR FAMILY 4.3-like {ECO:0000313|RefSeq:XP_009776306.1}))
HSP 1 Score: 941.799 bits (2433), Expect = 0.000e+0
Identity = 448/594 (75.42%), Postives = 527/594 (88.72%), Query Frame = 0
Query: 8 RNEHKGN-ITSDNTLDWRGRPSNPKLHGGMKAASFVLGVQAFEIMGIAAVGNNLITYVLNEMHYSLSRSANIVTNFIGTLFILALLGGFLSDSYLGCFWTMLIFGFLELSGFILLSVQAHLPQLKPPRCNMLVDGDNCVEARGLKAFIFFVALYLVALGSGCMKPNMISHGADQFN-KDDTKQSKKLSTYFNAAYFAFSLGELVALTLLVWLQTHSGMDVGFGVSAAAMGLGLISLVCGTLFYKNRPPQGSVLTPIAQVFVAAYYKRNKVCPSNPQLLHGGGSGV-PNTNTIMSSDVGHSQCTTRFRFLDKACIKMEEGSNISTESPWKLCTINQVEQVKTLITVIPIFACTIIFNTTLAQLQTFSVQQGSSMNSKLTTSFHIPPASLQAIPYIILIFLVPIYDTFFVPLARKITGHESGISPLKRIGLGLFVATFSMVAAAVMEHKRRVAAVKYNEIISIFWITPQYLIFGLSEMFTAIGLIEFFYKQKIKGMQSFLTAMTYCSYSFGFYLSSVLVSLVNKITSTSSNHGWLAENDLNNDRLDLFYWLLAGLSFINFLNYLFWAKWYSDSPSASDTISHYSDCNTAKVAGDNT 598
R ++KGN I+ + TLDWRG+PSN HGGMKAA+FVLGVQ FEIM IAAVGNNLITYV+NEMH+SLS+SAN+VTNFIGT+F+LALLGG+LSDSYLGCFWTMLIFGF+ELSGFILLSVQAHLPQLKPP CNM+ D ++CVEA+G KA IFF ALYLVALGSGC+KPNMI+HGADQFN +D+ KQSK+LS YFNAAYFAFS+GEL+ALT+LVW+QTHSGMD+GFG+SAAAM +GLISLV GT Y+N+PPQGS+ TP+AQVF+AA+ KR +VCPS+ ++LHG S PN+N +S D+G T +FRFLDKACIK+++G N + ESPWKLCT+ QVEQVK LI+VIPIFACTI+FNT LAQLQTFSVQQGSSMN+KLT SFHIPPASLQAIPYI+LIFLVP+YDTFFVP ARKITGH+SG++PL+RIGLGLFVATFSMV+AA+ME+KRR AAV N+ +SIFWITPQ+LIFG+SEMFTA+GLIEFFYKQ +KGMQSFLTA+TYCSYSFGFYLSSVLVSLVNKITS SS+ GWL++N+LN DRLDLFYWLLA LSF+NF NYLFWA+WYS + S+S TI H +KVAGD++
Sbjct: 4 RQDYKGNNISEETTLDWRGKPSNSSKHGGMKAAAFVLGVQGFEIMAIAAVGNNLITYVINEMHFSLSKSANVVTNFIGTVFLLALLGGYLSDSYLGCFWTMLIFGFVELSGFILLSVQAHLPQLKPPNCNMVTDEEHCVEAKGFKALIFFTALYLVALGSGCVKPNMIAHGADQFNYQDNPKQSKQLSRYFNAAYFAFSMGELIALTVLVWVQTHSGMDLGFGISAAAMAMGLISLVGGTFLYRNKPPQGSIFTPMAQVFMAAFSKRKEVCPSDARVLHGSHSNKGPNSNATISDDMGILHHTNQFRFLDKACIKVQDG-NSTKESPWKLCTVTQVEQVKILISVIPIFACTIVFNTILAQLQTFSVQQGSSMNTKLTKSFHIPPASLQAIPYIMLIFLVPLYDTFFVPFARKITGHDSGVTPLQRIGLGLFVATFSMVSAALMEYKRRNAAVNSNKTLSIFWITPQFLIFGVSEMFTAVGLIEFFYKQSVKGMQSFLTAITYCSYSFGFYLSSVLVSLVNKITSNSSHGGWLSDNNLNKDRLDLFYWLLAVLSFLNFFNYLFWARWYSRNRSSSATIQHDF---ISKVAGDDS 593
BLAST of XM_017373861.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4CHN2 ((protein NRT1/ PTR FAMILY 4.3-like {ECO:0000313|RefSeq:XP_016500519.1}))
HSP 1 Score: 941.799 bits (2433), Expect = 0.000e+0
Identity = 448/594 (75.42%), Postives = 527/594 (88.72%), Query Frame = 0
Match: A0A1S4CHN2 ((protein NRT1/ PTR FAMILY 4.3-like {ECO:0000313|RefSeq:XP_016500519.1}))
HSP 1 Score: 941.799 bits (2433), Expect = 0.000e+0
Identity = 448/594 (75.42%), Postives = 527/594 (88.72%), Query Frame = 0
Query: 8 RNEHKGN-ITSDNTLDWRGRPSNPKLHGGMKAASFVLGVQAFEIMGIAAVGNNLITYVLNEMHYSLSRSANIVTNFIGTLFILALLGGFLSDSYLGCFWTMLIFGFLELSGFILLSVQAHLPQLKPPRCNMLVDGDNCVEARGLKAFIFFVALYLVALGSGCMKPNMISHGADQFN-KDDTKQSKKLSTYFNAAYFAFSLGELVALTLLVWLQTHSGMDVGFGVSAAAMGLGLISLVCGTLFYKNRPPQGSVLTPIAQVFVAAYYKRNKVCPSNPQLLHGGGSGV-PNTNTIMSSDVGHSQCTTRFRFLDKACIKMEEGSNISTESPWKLCTINQVEQVKTLITVIPIFACTIIFNTTLAQLQTFSVQQGSSMNSKLTTSFHIPPASLQAIPYIILIFLVPIYDTFFVPLARKITGHESGISPLKRIGLGLFVATFSMVAAAVMEHKRRVAAVKYNEIISIFWITPQYLIFGLSEMFTAIGLIEFFYKQKIKGMQSFLTAMTYCSYSFGFYLSSVLVSLVNKITSTSSNHGWLAENDLNNDRLDLFYWLLAGLSFINFLNYLFWAKWYSDSPSASDTISHYSDCNTAKVAGDNT 598
R ++KGN I+ + TLDWRG+PSN HGGMKAA+FVLGVQ FEIM IAAVGNNLITYV+NEMH+SLS+SAN+VTNFIGT+F+LALLGG+LSDSYLGCFWTMLIFGF+ELSGFILLSVQAHLPQLKPP CNM+ D ++CVEA+G KA IFF ALYLVALGSGC+KPNMI+HGADQFN +D+ KQSK+LS YFNAAYFAFS+GEL+ALT+LVW+QTHSGMD+GFG+SAAAM +GLISLV GT Y+N+PPQGS+ TP+AQVF+AA+ KR +VCPS+ ++LHG S PN+N +S D+G T +FRFLDKACIK+++G N + ESPWKLCT+ QVEQVK LI+VIPIFACTI+FNT LAQLQTFSVQQGSSMN+KLT SFHIPPASLQAIPYI+LIFLVP+YDTFFVP ARKITGH+SG++PL+RIGLGLFVATFSMV+AA+ME+KRR AAV N+ +SIFWITPQ+LIFG+SEMFTA+GLIEFFYKQ +KGMQSFLTA+TYCSYSFGFYLSSVLVSLVNKITS SS+ GWL++N+LN DRLDLFYWLLA LSF+NF NYLFWA+WYS + S+S TI H +KVAGD++
Sbjct: 4 RQDYKGNNISEETTLDWRGKPSNSSKHGGMKAAAFVLGVQGFEIMAIAAVGNNLITYVINEMHFSLSKSANVVTNFIGTVFLLALLGGYLSDSYLGCFWTMLIFGFVELSGFILLSVQAHLPQLKPPNCNMVTDEEHCVEAKGFKALIFFTALYLVALGSGCVKPNMIAHGADQFNYQDNPKQSKQLSRYFNAAYFAFSMGELIALTVLVWVQTHSGMDLGFGISAAAMAMGLISLVGGTFLYRNKPPQGSIFTPMAQVFMAAFSKRKEVCPSDARVLHGSHSNKGPNSNATISDDMGILHHTNQFRFLDKACIKVQDG-NSTKESPWKLCTVTQVEQVKILISVIPIFACTIVFNTILAQLQTFSVQQGSSMNTKLTKSFHIPPASLQAIPYIMLIFLVPLYDTFFVPFARKITGHDSGVTPLQRIGLGLFVATFSMVSAALMEYKRRNAAVNSNKTLSIFWITPQFLIFGVSEMFTAVGLIEFFYKQSVKGMQSFLTAITYCSYSFGFYLSSVLVSLVNKITSNSSHGGWLSDNNLNKDRLDLFYWLLAVLSFLNFFNYLFWARWYSRNRSSSATIQHDF---ISKVAGDDS 593
BLAST of XM_017373861.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6M2EFS4 ((Uncharacterized protein {ECO:0000313|EMBL:NUU84153.1}))
HSP 1 Score: 936.406 bits (2419), Expect = 0.000e+0
Identity = 449/615 (73.01%), Postives = 526/615 (85.53%), Query Frame = 0
Match: A0A6M2EFS4 ((Uncharacterized protein {ECO:0000313|EMBL:NUU84153.1}))
HSP 1 Score: 936.406 bits (2419), Expect = 0.000e+0
Identity = 449/615 (73.01%), Postives = 526/615 (85.53%), Query Frame = 0
Query: 1 MEMQETSRNEHKGN----ITSDNTLDWRGRPSNPKLHGGMKAASFVLGVQAFEIMGIAAVGNNLITYVLNEMHYSLSRSANIVTNFIGTLFILALLGGFLSDSYLGCFWTMLIFGFLELSGFILLSVQAHLPQLKPPRCNMLVDGDNCVEARGLKAFIFFVALYLVALGSGCMKPNMISHGADQFNKDDTKQSKKLSTYFNAAYFAFSLGELVALTLLVWLQTHSGMDVGFGVSAAAMGLGLISLVCGTLFYKNRPPQGSVLTPIAQVFVAAYYKRNKVCPSNPQLLHGGGSGVPNTNTIM-SSDVGHSQCTTRFRFLDKACIKMEEGSNISTESPWKLCTINQVEQVKTLITVIPIFACTIIFNTTLAQLQTFSVQQGSSMNSKLTTSFHIPPASLQAIPYIILIFLVPIYDTFFVPLARKITGHESGISPLKRIGLGLFVATFSMVAAAVMEHKRRVAAVKYNEIISIFWITPQYLIFGLSEMFTAIGLIEFFYKQKIKGMQSFLTAMTYCSYSFGFYLSSVLVSLVNKIT-STSSNHGWLAENDLNNDRLDLFYWLLAGLSFINFLNYLFWAKWYSDSPSA-----------SDTISHYSDCNTAKVAGDNT 598
MEM E RN++KG I + T+DWRG+PSNP HGGM+AA+FVLG+QAFEIM IAAVGNNLITYV+NEMH+ LS++AN VTNF+GT+FILALLGG+LSDSYLGCFWTMLIFGF+ELSGFILLSVQAHLPQLKPP+CNML DG+NCVEA G+K+FIFFVALYLVALGSGC+KPNMI+HG DQFN+ + KQSKKLSTYFNAAYFAFS+GEL ALTLLVW+QTHSGMDVGFGVSAA M +GLISLV GTL+Y+N+PPQGS+ TPIAQVFVAA KR + CPSNPQ+LHG + V + + S+D G T RFRFLDKACI++E+G+NI ESPW+LC++ QVEQVK LI+ IPIFACTI+FNT LAQLQTFSVQQG +M+++L SFHIPPASLQ+IPYIILI +VP+YDTFFVPLARKITGHESGISPL+RIG GLF ATFSMV+AA+ME KRR AAV N+I+SIFWITPQ+LIFGLSEM TA+GLIEFFYKQ +KGMQ+FLTA+TYCSYSFGFYLSS+LVSLVNKIT S+SSN GWL++NDLN DRLDLFYW+LA LSF+NFLNYLFWA+WYS SP + D +++Y N++K D +
Sbjct: 1 MEM-EARRNDNKGESKCVIGEEITVDWRGKPSNPNKHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYVINEMHFPLSKAANTVTNFVGTIFILALLGGYLSDSYLGCFWTMLIFGFVELSGFILLSVQAHLPQLKPPQCNMLTDGENCVEAEGVKSFIFFVALYLVALGSGCVKPNMIAHGGDQFNQSNPKQSKKLSTYFNAAYFAFSMGELFALTLLVWIQTHSGMDVGFGVSAAVMAMGLISLVSGTLYYRNKPPQGSIFTPIAQVFVAAILKRKQTCPSNPQMLHGSQNSVLDNGIVAPSADSGSLAHTQRFRFLDKACIRIEDGTNIK-ESPWRLCSVTQVEQVKILISAIPIFACTIVFNTILAQLQTFSVQQGGAMDTQLAKSFHIPPASLQSIPYIILIIVVPLYDTFFVPLARKITGHESGISPLQRIGAGLFFATFSMVSAAIMEKKRRDAAVDSNKILSIFWITPQFLIFGLSEMLTAVGLIEFFYKQSLKGMQAFLTAITYCSYSFGFYLSSLLVSLVNKITSSSSSNQGWLSDNDLNKDRLDLFYWMLAVLSFLNFLNYLFWARWYSYSPISLSTTTQQETLGDDHLNNYGFINSSKHGVDES 613
BLAST of XM_017373861.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6I8A6 ((Protein nrt1 ptr family 4.3 {ECO:0000313|EMBL:OIT00676.1}))
HSP 1 Score: 935.636 bits (2417), Expect = 0.000e+0
Identity = 449/594 (75.59%), Postives = 531/594 (89.39%), Query Frame = 0
Match: A0A1J6I8A6 ((Protein nrt1 ptr family 4.3 {ECO:0000313|EMBL:OIT00676.1}))
HSP 1 Score: 935.636 bits (2417), Expect = 0.000e+0
Identity = 449/594 (75.59%), Postives = 531/594 (89.39%), Query Frame = 0
Query: 8 RNEHKGN-ITSDNTLDWRGRPSNPKLHGGMKAASFVLGVQAFEIMGIAAVGNNLITYVLNEMHYSLSRSANIVTNFIGTLFILALLGGFLSDSYLGCFWTMLIFGFLELSGFILLSVQAHLPQLKPPRCNMLVDGDNCVEARGLKAFIFFVALYLVALGSGCMKPNMISHGADQFN-KDDTKQSKKLSTYFNAAYFAFSLGELVALTLLVWLQTHSGMDVGFGVSAAAMGLGLISLVCGTLFYKNRPPQGSVLTPIAQVFVAAYYKRNKVCPSNPQLLHGGGS-GVPNTNTIMSSDVGHSQCTTRFRFLDKACIKMEEGSNISTESPWKLCTINQVEQVKTLITVIPIFACTIIFNTTLAQLQTFSVQQGSSMNSKLTTSFHIPPASLQAIPYIILIFLVPIYDTFFVPLARKITGHESGISPLKRIGLGLFVATFSMVAAAVMEHKRRVAAVKYNEIISIFWITPQYLIFGLSEMFTAIGLIEFFYKQKIKGMQSFLTAMTYCSYSFGFYLSSVLVSLVNKITSTSSNHGWLAENDLNNDRLDLFYWLLAGLSFINFLNYLFWAKWYSDSPSASDTISHYSDCNTAKVAGDNT 598
R ++KGN I+ + TLDWRG+PSN HGGMKAA+FVLGVQ FEIM IAAVGNNLITYV+NEMH+SLS+SAN+VTNFIGT+F+LALLGG+LSDSYLGCFWTMLIFGF+ELSGFILLSVQAHLPQLKPP CNML DG++CVEA+GLKA IFF ALYLVALGSGC+KPNMI+HGADQFN +D+ KQ+K+LS YFNAAYFAFS+GEL+ALT+LVW+QT SGMD+GFG+SAAAM +GLISLV GTLFY+N+PPQGS+ TP+AQVF+AA+ KR +VCPS+ ++LHG S PN+N +S D+G T +FRFLDKACIK+++G N + ESPWKLCT+ QVEQVK LI+VIPIFACTI+FNT LAQLQTFSVQQGSSMN+KLT SFHIPPASLQAIPYIILIFLVP+YDTFFVP ARKITGH+SG++PL+RIGLGLFVATFSMV+AA+ME+KRR AAV +++ +SIFWITPQ+LIFG+SEMFTA+GLIEFFYKQ +KGMQSFLTA+TYCSYSFGFYLSSVLVSLVNKITS SS+ GWL++N+LN DRLDLFYWLLA LSF+NF NYLFWA+WYS + S+S + + D +KVAGD++
Sbjct: 4 RQDYKGNNISEETTLDWRGKPSNSLKHGGMKAAAFVLGVQGFEIMAIAAVGNNLITYVINEMHFSLSKSANVVTNFIGTVFLLALLGGYLSDSYLGCFWTMLIFGFVELSGFILLSVQAHLPQLKPPNCNMLTDGEHCVEAKGLKALIFFTALYLVALGSGCVKPNMIAHGADQFNYQDNPKQTKQLSRYFNAAYFAFSMGELIALTVLVWVQTRSGMDLGFGISAAAMAMGLISLVGGTLFYRNKPPQGSIFTPMAQVFMAAFSKRKEVCPSDARVLHGSHSIKGPNSNATISDDMGILHHTNQFRFLDKACIKVQDG-NSTKESPWKLCTVTQVEQVKILISVIPIFACTIVFNTILAQLQTFSVQQGSSMNTKLTKSFHIPPASLQAIPYIILIFLVPLYDTFFVPFARKITGHDSGVTPLQRIGLGLFVATFSMVSAALMEYKRRNAAVNFDKTLSIFWITPQFLIFGVSEMFTAVGLIEFFYKQSVKGMQSFLTAITYCSYSFGFYLSSVLVSLVNKITSNSSHGGWLSDNNLNKDRLDLFYWLLAVLSFLNFFNYLFWARWYSRNRSSSSSATIQHDF-ISKVAGDDS 595
BLAST of XM_017373861.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1Q3B610 ((PTR2 domain-containing protein {ECO:0000313|EMBL:GAV63304.1}))
HSP 1 Score: 934.095 bits (2413), Expect = 0.000e+0
Identity = 443/607 (72.98%), Postives = 521/607 (85.83%), Query Frame = 0
Match: A0A1Q3B610 ((PTR2 domain-containing protein {ECO:0000313|EMBL:GAV63304.1}))
HSP 1 Score: 934.095 bits (2413), Expect = 0.000e+0
Identity = 443/607 (72.98%), Postives = 521/607 (85.83%), Query Frame = 0
Query: 1 MEMQETSRNEHKGN----ITSDNTLDWRGRPSNPKLHGGMKAASFVLGVQAFEIMGIAAVGNNLITYVLNEMHYSLSRSANIVTNFIGTLFILALLGGFLSDSYLGCFWTMLIFGFLELSGFILLSVQAHLPQLKPPRCNMLVDGDNCVEARGLKAFIFFVALYLVALGSGCMKPNMISHGADQFNKDDTKQSKKLSTYFNAAYFAFSLGELVALTLLVWLQTHSGMDVGFGVSAAAMGLGLISLVCGTLFYKNRPPQGSVLTPIAQVFVAAYYKRNKVCPSNPQLLHGGGSGVPNTNTIMSSDVGHSQCTTRFRFLDKACIKMEEGSNISTESPWKLCTINQVEQVKTLITVIPIFACTIIFNTTLAQLQTFSVQQGSSMNSKLTTSFHIPPASLQAIPYIILIFLVPIYDTFFVPLARKITGHESGISPLKRIGLGLFVATFSMVAAAVMEHKRRVAAVKYNEIISIFWITPQYLIFGLSEMFTAIGLIEFFYKQKIKGMQSFLTAMTYCSYSFGFYLSSVLVSLVNKITSTSSNHGWLAENDLNNDRLDLFYWLLAGLSFINFLNYLFWAKWYSDSPSA------SDTISHYSDCNTAKVAGDN 597
MEM E R +KG+ + + T+DWRGRPS+P HGGM+AA+FVLG+QAFEIM IAA+GNNLITYV+NEMH+ LS+SANIVTNF+GT+FILALLGG+LSDSYLGCFWTMLIFGF+ELSGFILLSVQAHLPQLKPP+CNML +GD+C+EA+G+KA +FFVALYLVALGSGC+KPNMI+HGADQFN+++ KQ KKLSTYFNAAYFAFS+GELVALT+LVW+QTHSGMDVGFGVSAA M +GLISLV GTL+Y+N+PPQGS+ TPI QVFVAA KR +V PSNP +LHG + N +S D G+ T RFRFLDKACI +E+G+ + ESPW+LCT+ QVEQVK LI+V+PIFACTI+FNT LAQLQTFSVQQGSSM+++LT SFH+PPASLQAIPY++LI +VP+YDTFFVP ARKITGHESGISPL RIGLGLFVATFSMV+AA+ME KRR AAV +I+SIFWI+PQ+LIFGLSEMFTA+GLIEFFYKQ + GMQ+FLTAMTYCSYSFGFYLSS+LVSLVNKIT++SSN GWL +NDLN DRLDLFYWLLA LS +NFLNYLFW++WYS S D +HYS N++K GD
Sbjct: 1 MEM-EARRQNNKGDNMAAMVEETTVDWRGRPSSPNKHGGMRAATFVLGLQAFEIMAIAAIGNNLITYVINEMHFPLSKSANIVTNFVGTIFILALLGGYLSDSYLGCFWTMLIFGFVELSGFILLSVQAHLPQLKPPQCNMLTEGDHCIEAKGIKALVFFVALYLVALGSGCVKPNMIAHGADQFNQNNPKQYKKLSTYFNAAYFAFSVGELVALTVLVWVQTHSGMDVGFGVSAAVMAMGLISLVSGTLYYRNKPPQGSIFTPITQVFVAAILKRKQVSPSNPHMLHGSQNNASNNIVAISPDSGNLLHTQRFRFLDKACIDVEDGTT-TKESPWRLCTVTQVEQVKILISVVPIFACTIVFNTILAQLQTFSVQQGSSMDTQLTKSFHVPPASLQAIPYVLLIIVVPLYDTFFVPFARKITGHESGISPLIRIGLGLFVATFSMVSAAIMEKKRRDAAVNSGKILSIFWISPQFLIFGLSEMFTAVGLIEFFYKQSLNGMQAFLTAMTYCSYSFGFYLSSLLVSLVNKITASSSNGGWLHDNDLNKDRLDLFYWLLAALSLLNFLNYLFWSRWYSRSSPPQQHTLIKDDFNHYS-FNSSKHIGDE 604
BLAST of XM_017373861.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A837A7Q4 ((Proton-dependent oligopeptide transport family protein {ECO:0000313|EMBL:KAG5248420.1}))
HSP 1 Score: 933.71 bits (2412), Expect = 0.000e+0
Identity = 448/611 (73.32%), Postives = 526/611 (86.09%), Query Frame = 0
Match: A0A837A7Q4 ((Proton-dependent oligopeptide transport family protein {ECO:0000313|EMBL:KAG5248420.1}))
HSP 1 Score: 933.71 bits (2412), Expect = 0.000e+0
Identity = 448/611 (73.32%), Postives = 526/611 (86.09%), Query Frame = 0
Query: 1 MEMQETSRNEHKGN----ITSDNTLDWRGRPSNPKLHGGMKAASFVLGVQAFEIMGIAAVGNNLITYVLNEMHYSLSRSANIVTNFIGTLFILALLGGFLSDSYLGCFWTMLIFGFLELSGFILLSVQAHLPQLKPPRCNMLVDGDNCVEARGLKAFIFFVALYLVALGSGCMKPNMISHGADQFNKDDTKQSKKLSTYFNAAYFAFSLGELVALTLLVWLQTHSGMDVGFGVSAAAMGLGLISLVCGTLFYKNRPPQGSVLTPIAQVFVAAYYKRNKVCPSNPQLLHGGGSGVPNTNTIM-SSDVGHSQCTTRFRFLDKACIKMEEGSNISTESPWKLCTINQVEQVKTLITVIPIFACTIIFNTTLAQLQTFSVQQGSSMNSKLTTSFHIPPASLQAIPYIILIFLVPIYDTFFVPLARKITGHESGISPLKRIGLGLFVATFSMVAAAVMEHKRRVAAVKYNEIISIFWITPQYLIFGLSEMFTAIGLIEFFYKQKIKGMQSFLTAMTYCSYSFGFYLSSVLVSLVNKIT-STSSNHGWLAENDLNNDRLDLFYWLLAGLSFINFLNYLFWAKWYSDSPSAS-------DTISHYSDCNTAKVAGDNT 598
MEM E R ++KG + + T+DWRG+PSNP HGGM+AA+FVLG+QAFEIM IAAVGNNLITYV+NEMH+SLS SANIVTNF+GT+FILALLGG+LSDSYLGCFWTML FGF+ELSGFILLSVQAHLPQLKPP+CNML DG+NCVEA+G+K+ IFFVALYLVALGSGC+KPNMI+HG DQFN+ + KQSKKLSTYFNAAYFAFS+GEL ALTLLVW+QTHSGMDVGFGVSAA M +GLISLV GTL+Y+N+PPQGS+LTPIAQVFVAA KR ++CPSNPQ+LHG + V N + S+D G T RFRFLDKACIK+E G+N+ ESPW+LC++ QVE+VK LI+ IPIFACTI+FNT LAQLQTFSVQQG +M+++L SFHIPPASLQ+IPYIILI +VP+YDTFFVPLARKITGHESGISPL+RIG GL ATFSMV+AA+ME KRR AAV N+I+SIFWITPQ+LIFGLSEM TA+GLIEFFYKQ +KGMQ+FLTA+TYCSYSFGFYLSS+LVSLVNKIT S+SSN GWL +NDLN DRLDLFYW+LA LSF+NFL+YLFWAKWYS SP+ + D +++Y N++K + D +
Sbjct: 1 MEM-EARRYDNKGESKCVVGEEITVDWRGKPSNPNKHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYVINEMHFSLSESANIVTNFVGTIFILALLGGYLSDSYLGCFWTMLFFGFVELSGFILLSVQAHLPQLKPPQCNMLTDGENCVEAKGVKSLIFFVALYLVALGSGCVKPNMIAHGGDQFNQSNPKQSKKLSTYFNAAYFAFSMGELFALTLLVWIQTHSGMDVGFGVSAAVMAMGLISLVSGTLYYRNKPPQGSILTPIAQVFVAAILKRKQICPSNPQMLHGSKNRVLNNGIVAPSADSGSLAHTQRFRFLDKACIKIEVGTNVK-ESPWRLCSVTQVEEVKILISAIPIFACTIVFNTILAQLQTFSVQQGGAMDTQLAKSFHIPPASLQSIPYIILIIVVPLYDTFFVPLARKITGHESGISPLQRIGAGLCFATFSMVSAAIMEKKRRDAAVDSNKILSIFWITPQFLIFGLSEMLTAVGLIEFFYKQSLKGMQAFLTAITYCSYSFGFYLSSLLVSLVNKITSSSSSNQGWLGDNDLNKDRLDLFYWMLAVLSFLNFLSYLFWAKWYSYSPTTTQQETLGDDHLNNYGFINSSKHSVDES 609
BLAST of XM_017373861.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A835N1B9 ((Uncharacterized protein {ECO:0000313|EMBL:KAF9684919.1}))
HSP 1 Score: 932.939 bits (2410), Expect = 0.000e+0
Identity = 449/616 (72.89%), Postives = 527/616 (85.55%), Query Frame = 0
Match: A0A835N1B9 ((Uncharacterized protein {ECO:0000313|EMBL:KAF9684919.1}))
HSP 1 Score: 932.939 bits (2410), Expect = 0.000e+0
Identity = 449/616 (72.89%), Postives = 527/616 (85.55%), Query Frame = 0
Query: 1 MEMQETSRNEHKGN----ITSDNTLDWRGRPSNPKLHGGMKAASFVLGVQAFEIMGIAAVGNNLITYVLNEMHYSLSRSANIVTNFIGTLFILALLGGFLSDSYLGCFWTMLIFGFLELSGFILLSVQAHLPQLKPPRCNMLVDGDNCVEARGLKAFIFFVALYLVALGSGCMKPNMISHGADQFNKDDTKQSKKLSTYFNAAYFAFSLGELVALTLLVWLQTHSGMDVGFGVSAAAMGLGLISLVCGTLFYKNRPPQGSVLTPIAQVFVAAYYKRNKVCPSNPQLLHGGGSGVPNTNTIM-SSDVGHSQCTTRFRFLDKACIKMEEGSNISTESPWKLCTINQVEQVKTLITVIPIFACTIIFNTTLAQLQTFSVQQGSSMNSKLTTSFHIPPASLQAIPYIILIFLVPIYDTFFVPLARKITGHESGISPLKRIGLGLFVATFSMVAAAVMEHKRRVAAVKYNEIISIFWITPQYLIFGLSEMFTAIGLIEFFYKQKIKGMQSFLTAMTYCSYSFGFYLSSVLVSLVNKIT-STSSNHGWLAENDLNNDRLDLFYWLLAGLSFINFLNYLFWAKWYSDSP------------SASDTISHYSDCNTAKVAGDNT 598
MEM E R ++KG I + T+DWRG+PSNP HGGM+AA+FVLG+QAFEIM IAAVGNNLITYV+NEMH+SLS+SANIVTNF+GT+FILALLGG+LSDSYLGCFWTMLIFGF+ELSGFILLSVQAHLPQLKPP+CNML DG+NCVEA+G+K+ IFFVALYLVALGSGC+KPNMI+HG DQFN+ + +QSKKLSTYFNAAYFAFS+GEL ALTLLVW+QTHSGMDVGFGVSAA M +GLISLV GTL+Y+N+PPQGS+LTPIAQVFVAA KR ++CPSNPQ+LHG + V N + S+D G T RFRFLDKACIK+E G+N+ ESPW+LC++ QVE+VK LI+ IPIFACTI+FNT LAQLQTFSVQQG +M+++L SFHIPPASLQ+IPYIILI +VP+YDTFFVPLARKITGHESGISPL+RIG GL ATFSMV+AA+ME KRR AAV N+I+SIFWITPQ+LIFGLSEM TA+GLIEFFYKQ +KGMQ+FLTA+TYCSYSFGFYLSS+LVSLVNKIT S+SSN GWL++NDLN DRLDLFYW+LA LSF+NFL+YLFWAKWYS SP D +++Y N++K + D +
Sbjct: 1 MEM-EARRYDNKGESKCVIGEEITVDWRGKPSNPNKHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYVINEMHFSLSKSANIVTNFVGTIFILALLGGYLSDSYLGCFWTMLIFGFVELSGFILLSVQAHLPQLKPPQCNMLTDGENCVEAKGVKSLIFFVALYLVALGSGCVKPNMIAHGGDQFNQRNPQQSKKLSTYFNAAYFAFSMGELFALTLLVWIQTHSGMDVGFGVSAAVMAMGLISLVSGTLYYRNKPPQGSILTPIAQVFVAAILKRKQICPSNPQMLHGSQNRVLNNGIVAPSADSGSLAHTQRFRFLDKACIKIEVGTNVK-ESPWRLCSVTQVEEVKILISAIPIFACTIVFNTILAQLQTFSVQQGGAMDTQLAKSFHIPPASLQSIPYIILIIVVPLYDTFFVPLARKITGHESGISPLQRIGAGLCFATFSMVSAAIMEKKRRDAAVDSNKILSIFWITPQFLIFGLSEMLTAVGLIEFFYKQSLKGMQAFLTAITYCSYSFGFYLSSLLVSLVNKITSSSSSNQGWLSDNDLNKDRLDLFYWMLAVLSFLNFLSYLFWAKWYSYSPISLLTTTTQQETLGDDHLNNYGFINSSKHSVDES 614
BLAST of XM_017373861.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4U5QJT6 ((Proton-dependent oligopeptide transport family protein {ECO:0000313|EMBL:TKS10948.1}))
HSP 1 Score: 932.939 bits (2410), Expect = 0.000e+0
Identity = 448/615 (72.85%), Postives = 527/615 (85.69%), Query Frame = 0
Match: A0A4U5QJT6 ((Proton-dependent oligopeptide transport family protein {ECO:0000313|EMBL:TKS10948.1}))
HSP 1 Score: 932.939 bits (2410), Expect = 0.000e+0
Identity = 448/615 (72.85%), Postives = 527/615 (85.69%), Query Frame = 0
Query: 1 MEMQETSRNEHKGN----ITSDNTLDWRGRPSNPKLHGGMKAASFVLGVQAFEIMGIAAVGNNLITYVLNEMHYSLSRSANIVTNFIGTLFILALLGGFLSDSYLGCFWTMLIFGFLELSGFILLSVQAHLPQLKPPRCNMLVDGDNCVEARGLKAFIFFVALYLVALGSGCMKPNMISHGADQFNKDDTKQSKKLSTYFNAAYFAFSLGELVALTLLVWLQTHSGMDVGFGVSAAAMGLGLISLVCGTLFYKNRPPQGSVLTPIAQVFVAAYYKRNKVCPSNPQLLHGGGSGVPNTNTIM-SSDVGHSQCTTRFRFLDKACIKMEEGSNISTESPWKLCTINQVEQVKTLITVIPIFACTIIFNTTLAQLQTFSVQQGSSMNSKLTTSFHIPPASLQAIPYIILIFLVPIYDTFFVPLARKITGHESGISPLKRIGLGLFVATFSMVAAAVMEHKRRVAAVKYNEIISIFWITPQYLIFGLSEMFTAIGLIEFFYKQKIKGMQSFLTAMTYCSYSFGFYLSSVLVSLVNKIT-STSSNHGWLAENDLNNDRLDLFYWLLAGLSFINFLNYLFWAKWYSDSPSA-----------SDTISHYSDCNTAKVAGDNT 598
MEM E R+++KG I + T+DWRG+PSNP HGGM+AA+FVLG+QAFEIM IAAVGNNLITYV+NEMH+ LS++AN VTNF+GT+FILALLGG+LSDSYLGCFWTMLIFGF+ELSGFILLSVQAHLPQLKPP+CNML DG+NCVEA+G+K+FIFFVALYLVALGSGC+KPNMI+HG DQFN+ + KQSKKLSTYFNAAYFAFS+GEL ALTLLVW+QTHSGMDVGFGVSAA M +GLISLV G+L+Y+N+PPQGS+ TPIAQVFVAA KR + CPSNPQ+LHG + V + I S+D G T RFRFLDKACIK+E+G+NI ESPW+LC++ QVEQVK LI+ IPIFACTI+FNT LAQLQTFSVQQG +M+++L SFHIPPASLQ+IPYIILI +VP+YDTFFVPLARKITGHESGISPL+RIG GLF ATFSMV+AA+ME KRR AAV N+I+SIFWITPQ+LIFGLSEM TA+GLIEFFYKQ +KGMQ+FLTA+TYCSYSFGFYLSS+LVSLVNKIT S+SSN GWL++NDLN DRLDLFYW+LA LSF+NFL+YLFWA+WYS SP + D +++Y N++K D +
Sbjct: 1 MEM-EARRHDNKGESKCVIGEEITVDWRGKPSNPNKHGGMRAAAFVLGLQAFEIMAIAAVGNNLITYVINEMHFPLSKAANTVTNFVGTIFILALLGGYLSDSYLGCFWTMLIFGFVELSGFILLSVQAHLPQLKPPQCNMLTDGENCVEAKGVKSFIFFVALYLVALGSGCVKPNMIAHGGDQFNQSNPKQSKKLSTYFNAAYFAFSMGELFALTLLVWIQTHSGMDVGFGVSAAVMAMGLISLVSGSLYYRNKPPQGSIFTPIAQVFVAAILKRKQTCPSNPQMLHGSQNSVLDNGIIAPSADSGSLAHTQRFRFLDKACIKIEDGTNIK-ESPWRLCSVTQVEQVKILISAIPIFACTIVFNTILAQLQTFSVQQGGAMDTQLAKSFHIPPASLQSIPYIILIIVVPLYDTFFVPLARKITGHESGISPLQRIGAGLFFATFSMVSAAIMEKKRRDAAVDSNKILSIFWITPQFLIFGLSEMLTAVGLIEFFYKQSLKGMQAFLTAITYCSYSFGFYLSSLLVSLVNKITSSSSSNRGWLSDNDLNKDRLDLFYWMLAVLSFLNFLSYLFWARWYSYSPISLATTTQQETLGDDHLNNYGFINSSKHGVDES 613
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7C1R3 | E-Value: 0.000e+0, PID: 75.12 | (Uncharacterized protein {ECO:0000313|EMBL:MPA7485... [more] |
| A0A5J5B486 | E-Value: 0.000e+0, PID: 74.75 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8536... [more] |
| A0A1U7WGB6 | E-Value: 0.000e+0, PID: 75.42 | (protein NRT1/ PTR FAMILY 4.3-like {ECO:0000313|Re... [more] |
| A0A1S4CHN2 | E-Value: 0.000e+0, PID: 75.42 | (protein NRT1/ PTR FAMILY 4.3-like {ECO:0000313|Re... [more] |
| A0A6M2EFS4 | E-Value: 0.000e+0, PID: 73.01 | (Uncharacterized protein {ECO:0000313|EMBL:NUU8415... [more] |
| A0A1J6I8A6 | E-Value: 0.000e+0, PID: 75.59 | (Protein nrt1 ptr family 4.3 {ECO:0000313|EMBL:OIT... [more] |
| A0A1Q3B610 | E-Value: 0.000e+0, PID: 72.98 | (PTR2 domain-containing protein {ECO:0000313|EMBL:... [more] |
| A0A837A7Q4 | E-Value: 0.000e+0, PID: 73.32 | (Proton-dependent oligopeptide transport family pr... [more] |
| A0A835N1B9 | E-Value: 0.000e+0, PID: 72.89 | (Uncharacterized protein {ECO:0000313|EMBL:KAF9684... [more] |
| A0A4U5QJT6 | E-Value: 0.000e+0, PID: 72.85 | (Proton-dependent oligopeptide transport family pr... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |