XM_017374902.1

Resource Type: 
Polypeptide
Name: 
XM_017374902.1
Identifier: 
XM_017374902.1-protein
Sequence: 
MRRNQNNYINNSNKTNTTATNGFLPKLISSCIKTVSSAVRASVAADDHFH
KDQVLWAGFDRLELGASVVKSLLLLGYSNGFQVLDVEDASNVTELVSRRD
DAVTFLQMQPIPAKCDDREGFMDSLPLLLVVASEETSCSGPMQNGRDSSV
RDKYEPRVGTVIHTPTAVRFYSLRSHSYVHVLRFRSAVYMVRCSSKIVAV
GLAAQIYCFDALTLESKFSVLTYHVPRLGGQALSGVNIGYGPMAVGPRWL
AYASNNPLLPNTGRLSPQSLSPSPGVSPSTSPSNGNLMARYAMESSKQLA
TGIINLGDMGIKTFSKYCHELLPDGSSSPVSSIASGKVGRTTAHLSDVDT
AGTVVIKDFVSRAVVSQFRAHTCPIAALCFDPSGTLLVTASVKGNNINIF
RIVPTYLQNGSGSHSYDWSSSHVHLYKLHRGITSAVIQDICFSPSSHWIA
IVSSNHTGHIFVLSPFGGETGLQMQNSNLNGPTLLPLRSVPWWSTSSYML
KQSYSPPPPPLITLSVVSRIKNSTWLSTVRNAASSAAGKLPPPPGVVSAI
FHSSVGNLQPTNLTVNALEHLMVYTPSGNVVQYELLHSVGGDQGESFLRN
GTSSLEQVQDEELKVKASPVQWWDVCRRADWPEREEFIQGNVLGRQDSAE
TVICPYEYEDDGTKEKDTVKHHDQYHWYLSKAEVQIRSGRTPVWQKSKVY
SYAMSSVSVEGGRPNLYSSGGEIEIEKLHAREIEIRRKDLLPVSDHFHQL
HHKWANNRGINVRYSPSSSLSDEGNKYSDDEQALIPSSVDNLITGIRSSA
TDLSKQEYHATMNSYPPFRPIDNENKGVKGSNFLPTQNSIGRAATSLSPE
PSPSMISAFEECYVNNYSSISSKPSPSGGNISEEVLSSSSVVTGDVSNTS
SKCTDSTMNLPEELGHEDIHYFQEGYFESTSLDKFNQFNKHTTEVDRSTS
HCNKADFEEDADSDDILGGVFAFSKEG
Sequence Length: 
977
Sequence Checksum: 
c52a1db0cee6612010ab991ce39580c8
View location in JBrowse: 
DCARv2_Chr1:22487770..22498531-
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017374902.1, derives from mRNA, XM_017374902.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017374902.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017374902.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BTC7 ((Putative autophagy-related protein 18h {ECO:0000313|EMBL:MPA72172.1}))

HSP 1 Score: 1141.72 bits (2952), Expect = 0.000e+0
Identity = 639/1031 (61.98%), Postives = 757/1031 (73.42%), Query Frame = 0
 
Query:    1 MRRNQNNYINNSNKTNTTATNGFLP---KLISSCIKTVSSAVRA-------SVAAD-DHFHKDQVLWAGFDRLELGASVVKSLLLLGYSNGFQVLDVEDASNVTELVSRRDDAVTFLQMQPIPAKCDDREGFMDSLPLLLVVASEETSCSGPMQNGRDSSVRDKY-EPRVGTVIHTPTAVRFYSLRSHSYVHVLRFRSAVYMVRCSSKIVAVGLAAQIYCFDALTLESKFSVLTYHVPRLGGQALSGVNIGYGPMAVGPRWLAYASNNPLLPNTGRLSPQSLSPSPGVSPSTSPSNGNLMARYAMESSKQLATGIINLGDMGIKTFSKYCHELLPDGSSSPVSSIASGKVGRTTAHLSDVDTAGTVVIKDFVSRAVVSQFRAHTCPIAALCFDPSGTLLVTASVKGNNINIFRIVPTYLQNGSGSHSYDWSSSHVHLYKLHRGITSAVIQDICFSPSSHWIAIVSSNHTGHIFVLSPFGGETGLQMQNSNLNGPTLLPLRSVPWWSTSSYMLKQSYSPPPPPLITLSVVSRIK--NSTWLSTVRNAASSAAGKLPPPPGVVSAIFHSSVG-NLQPTNLTVNALEHLMVYTPSGNVVQYELLHSVGGDQGESFLRNGTSSLEQVQDEELKVKASPVQWWDVCRRADWPEREEFIQGNVLGRQDSAETVICPYEYEDDGTKEKDTVKHHDQYHWYLSKAEVQIRSGRTPVWQKSKVYSYAMSSVSVEGGRPNLYSSGGEIEIEKLHAREIEIRRKDLLPVSDHFHQLHHKWANNRG--------------INVRYSPSSSLSDEGN-KYSDDEQA-----LIPSSVDNLITGIRSSATDLSKQEYHATMNSYPPFRPIDNENKGVKGSNFLPT-----QNSIGRAATSLSPEPSPSMISAFEECYVNNYSSISSKPSPSGGNISEEVLSSSSVVTGDVSNTSSKCTDSTMNLPEELG-HEDIH-------YFQEGYFESTSLDKFNQFNKHTTEVDRSTSHCNKADFEE------DADSDDILGGVFAFSKEG 977
            M++NQ N    +NK    +TNGF+P   + ISSCIKTVSS VR+       S++ D D  HKDQVLWA FDRLELG S VK +LLLGYSNGFQVLD+EDASNV+ELVSRRDD VTFLQMQPIPAK + REGF  S PLLLVVAS+E   SGP+Q GRD SVRD Y E + G  +++PTAVRFYSLRSH+YVHVLRFRS VYMVRCS +IVAVGLAAQIYCFDALTLE+KFSVLTY VP+LGGQ + G+NIGYGPMAVGPRWLAY SNNPLL NTGRLSPQSLSPSPGVSPSTSPS+GNL+ARYA+ESSKQ A G+INLGDMG KTFSKYCHELLPDGSSSPVSS +  KVGR  AH ++ DTAG VVIKDFVSRAVVSQFRAHT PI+ALCFDPSGTLLVTAS+ GNNINIFRI+P+  QNGSG+ SYDWSSSHVHLYKLHRG+TSAVI DICFS  S WIAIVSS  T HIFVLSPFGGETGLQ+QNS++  PTL P+ + PWWS SS ++     PPPPP ITLSVVSRI+  NS WL+TV NAASSAAGK+  P GVV+A+FHSSV  +LQP  L VNALEHL+VYTPSGNV+QYELL S+ G+QGES  R GT SL Q+Q EEL+VK  PVQWWDVCRRADWPEREE + G  LGRQ++AETV+   + ED+   EKD VK H++ HWYLS AEVQ+R+GR P+WQKSK+Y + MS +  EG       +G EIEIEK+   E+EIRR+DLLPV DHFH++   W ++RG              +  R+S SSS S  G  K+ +D  A     + PSSV+N   G  ++   +   +   T+ SYP      N N  VK  + +       Q S  R     SPE S +  S+ EE Y  N    S   S +GG ++ EV SS+SV+T +VSNTSS  +D +MN+ +E   HED+H       YFQEGY +++++D+  +  +  T+VD S S C+K   EE      D+DSDD+LGGVFAFS+EG
Sbjct:    1 MKKNQTN----NNKAKNNSTNGFIPNSLRFISSCIKTVSSNVRSAGVSVAGSISGDCDEHHKDQVLWASFDRLELGPSSVKRVLLLGYSNGFQVLDIEDASNVSELVSRRDDPVTFLQMQPIPAKSEGREGFRTSHPLLLVVASDEARNSGPIQYGRDGSVRDGYLESQTGNFLNSPTAVRFYSLRSHNYVHVLRFRSTVYMVRCSPQIVAVGLAAQIYCFDALTLENKFSVLTYPVPQLGGQGMVGINIGYGPMAVGPRWLAYPSNNPLLSNTGRLSPQSLSPSPGVSPSTSPSSGNLVARYALESSKQFAAGLINLGDMGYKTFSKYCHELLPDGSSSPVSSNSGWKVGR-VAHSTETDTAGMVVIKDFVSRAVVSQFRAHTSPISALCFDPSGTLLVTASIHGNNINIFRIMPSCSQNGSGTQSYDWSSSHVHLYKLHRGMTSAVIHDICFSHYSQWIAIVSSRGTCHIFVLSPFGGETGLQIQNSHVEEPTLTPVLTPPWWSASSLLINPQSFPPPPPPITLSVVSRIRTGNSGWLNTVSNAASSAAGKVSVPSGVVAAVFHSSVRHDLQPPVLNVNALEHLLVYTPSGNVIQYELLPSMAGEQGESAPRTGTGSLAQMQ-EELRVKGEPVQWWDVCRRADWPEREECVYGITLGRQEAAETVMNTSDCEDNDMGEKDLVKPHERSHWYLSNAEVQVRTGRIPLWQKSKIYFFDMSPLGDEGQNLTKDYTGEEIEIEKIPVHEVEIRRRDLLPVFDHFHRIQSDWNDDRGLVGGRYSTTSHGGLVEGRFSTSSSNSHGGKEKFPEDTVASHSKLVSPSSVENSDVGSSATPAPVHYLDQKGTVKSYPHTVLTANGNDVVKRQSAISAPPPLNQRSFNRGDALTSPEISATGTSSGEESYGVNSPPKSGILS-TGGTVAREVQSSNSVLTSEVSNTSSDRSDLSMNILDEGPVHEDMHDSLDFGQYFQEGYCKASTVDECCEPTEGVTDVDSSHSPCDKEKSEEDGDRDRDSDSDDMLGGVFAFSEEG 1024
[Close]
BLAST of XM_017374902.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5B0Y5 (BCAS3 domain-containing protein {ECO:0000259|Pfam:PF12490})

HSP 1 Score: 1107.82 bits (2864), Expect = 0.000e+0
Identity = 622/1030 (60.39%), Postives = 749/1030 (72.72%), Query Frame = 0
 
Query:    1 MRRNQNNYINNSNKTNTTATNGFLP---KLISSCIKTVSSAVR---ASVAAD-----DHFHKDQVLWAGFDRLELGASVVKSLLLLGYSNGFQVLDVEDASNVTELVSRRDDAVTFLQMQPIPAKCDDREGFMDSLPLLLVVASEETSCSGPMQNGRDSSVRDKY-EPRVGTVIHTPTAVRFYSLRSHSYVHVLRFRSAVYMVRCSSKIVAVGLAAQIYCFDALTLESKFSVLTYHVPRLGGQALSGVNIGYGPMAVGPRWLAYASNNPLLPNTGRLSPQSLSPSPGVSPSTSPSNGNLMARYAMESSKQLATGIINLGDMGIKTFSKYCHELLPDGSSSPVSSIASGKVGRTTAHLSDVDTAGTVVIKDFVSRAVVSQFRAHTCPIAALCFDPSGTLLVTASVKGNNINIFRIVPTYLQNGSGSHSYDWSSSHVHLYKLHRGITSAVIQDICFSPSSHWIAIVSSNHTGHIFVLSPFGGETGLQMQNSNLNGPTLLPLRSVPWWSTSSYMLKQSYSPPPPPLITLSVVSRIK--NSTWLSTVRNAASSAAGKLPPPPGVVSAIFHSSV-GNLQPTNLTVNALEHLMVYTPSGNVVQYELLHSVGGDQGESFLRNGTSSLEQVQDEELKVKASPVQWWDVCRRADWPEREEFIQGNVLGRQDSAETVICPYEYEDDGTKEKDTVKHHDQYHWYLSKAEVQIRSGRTPVWQKSKVYSYAMSSVSVEGGRPNLYSSGGEIEIEKLHAREIEIRRKDLLPVSDHFHQLHHKWANNRG-INVRYSP------------SSSLSDEGNKYSDDEQAL-------IPSSVDNLITGIRSSATDLSKQEYHATMNSYPPFRPIDNENKGVKGSNFLPT-----QNSIGRAATSLSPEPSPSMISAFEECYVNNYSSISSKPSPS-----GGNISEEVLSSSSVVTGDVSNTSSKCTDSTMNLPEELG-HEDIH-------YFQEGYFESTSLDKFNQFNKHTTEVDRSTSHCNKADFEEDADSDDILGGVFAFSKEG 977
            M++NQ N  N+  K N+T  +GFLP   + ISSCIKTVSS VR   ASVA       D  HKDQVLWA FD+LELG S VK +LLLGYSNGFQ+LD+EDASNV+ELVSRRDD VTFLQMQPIPAK + REGF  S PLLLVVAS+E    GP+Q GRD SVRD Y E + G  +++PTAVRFYSLRSH+YVHVLRFRSAVYMVRCS +IVAVGLAAQIYCFDA TLE+KFSVLTY VP+LGGQ + G+NIGYGPMAVGPRWLAY SNNPLL NTGRLSPQSLSPSPGVSPSTSP +G+L+ARYA+ESSKQ A G+INLGDMG KTFSKYCHELLPDGSSSPVSS +S KVGR  AH ++ DTAG VVIKDFVSRAVVSQFRAHT PI+ALCFDPSGTLLVTAS+ GNN+NIFRI+P+  QNGSG+ SYD+S+SHVHLYKLHRG+TSAVI DICFS  S WIAIVSS  T HIFVLSPFGGETGLQ+QNS++  PTL+P+ + PWWS SS ++     PPPPPL TLSVVSRI+  NS WL+TV NAASSAAGK+  P GVV+A+FHSSV  +LQ   + VNALEHL+VYTPSGNV+QYELL S+ G+QG+S  R+GT SL Q+Q EEL+VK  P+Q WDVCRRADWPEREE +    LGRQ++AET++  ++ E +   EK+ VK H++ HWYLS AEV +R+GR P+WQKSK+Y + MS +  E        +GGEIEIEK+   E+EI+RKDLLPV DHF ++   W + RG +  RYS             +SS +  G K    E AL        P SV+N   G  +  T +   +   T+  YP      N N  VK    +       Q S     TS SPE S +   + EE Y     ++SS P  S     GG+++ E+ SS+SV+T +VSNTSS  +D +MN+ +E   HED+H       YFQEGY +++++D+  +  +  T+VD S S C+K   EED D+DD+LGGVFAFS+EG
Sbjct:    1 MKKNQTN--NSKGKNNST--HGFLPNSLRFISSCIKTVSSNVRSAGASVAGSISGDCDEHHKDQVLWASFDKLELGPSSVKRVLLLGYSNGFQILDIEDASNVSELVSRRDDPVTFLQMQPIPAKYEGREGFGASHPLLLVVASDEARNLGPIQYGRDGSVRDGYLESQTGNFLNSPTAVRFYSLRSHNYVHVLRFRSAVYMVRCSPRIVAVGLAAQIYCFDARTLENKFSVLTYPVPQLGGQGMVGINIGYGPMAVGPRWLAYPSNNPLLSNTGRLSPQSLSPSPGVSPSTSPGSGSLVARYALESSKQFAAGLINLGDMGYKTFSKYCHELLPDGSSSPVSSNSSWKVGRVAAHSTETDTAGMVVIKDFVSRAVVSQFRAHTSPISALCFDPSGTLLVTASIHGNNMNIFRIMPSCSQNGSGTQSYDFSNSHVHLYKLHRGMTSAVIHDICFSHYSQWIAIVSSRGTCHIFVLSPFGGETGLQVQNSHVEDPTLVPVLTPPWWSASSLLINLQSFPPPPPL-TLSVVSRIRTGNSGWLNTVSNAASSAAGKVSVPSGVVAAVFHSSVHHDLQQPLINVNALEHLLVYTPSGNVIQYELLPSMTGEQGDSAPRSGTGSLVQMQ-EELRVKGEPIQCWDVCRRADWPEREECVYEITLGRQEAAETIMDTFDCEGNDMGEKNLVKPHERSHWYLSNAEVLVRTGRIPLWQKSKIYFFDMSPLGDEEQNLTKDYTGGEIEIEKIPVHEVEIKRKDLLPVFDHFPRIQSDWNDVRGPVGGRYSTTSHGGLVEGGFSTSSSNSHGGKEKFPEDALDSHGKLVSPGSVENSDVGSSTPPTPMHYLDQKGTVKMYPHTVLTANGNNVVKRHTAISASPPLKQRSFNIGDTSSSPELSATGFFSGEESY-----AVSSPPPKSSLLFTGGSVARELQSSNSVLTSEVSNTSSDRSDLSMNILDEGPVHEDMHDSLDFGQYFQEGYCKASTVDECCESTEVITDVDSSQSPCDKEKSEEDGDNDDMLGGVFAFSEEG 1019
[Close]
BLAST of XM_017374902.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6ITC9 ((Autophagy-related protein 18h {ECO:0000313|EMBL:OIT07516.1}))

HSP 1 Score: 1105.12 bits (2857), Expect = 0.000e+0
Identity = 583/983 (59.31%), Postives = 714/983 (72.63%), Query Frame = 0
 
Query:   18 TATNGFLP---KLISSCIKTVSSAVRASVAA------DDHFHKDQVLWAGFDRLELGASVVKSLLLLGYSNGFQVLDVEDASNVTELVSRRDDAVTFLQMQPIPAKCDDREGFMDSLPLLLVVASEETSCSGPMQNGRDSSVRDKYEPRVGTVIHTPTAVRFYSLRSHSYVHVLRFRSAVYMVRCSSKIVAVGLAAQIYCFDALTLESKFSVLTYHVPRLGGQALSGVNIGYGPMAVGPRWLAYASNNPLLPNTGRLSPQSLSPSPGVSPSTSPSNGNLMARYAMESSKQLATGIINLGDMGIKTFSKYCHELLPDGSSSPVSSIASGKVGRTTAHLSDVDTAGTVVIKDFVSRAVVSQFRAHTCPIAALCFDPSGTLLVTASVKGNNINIFRIVPTYLQNGSGSHSYDWSSSHVHLYKLHRGITSAVIQDICFSPSSHWIAIVSSNHTGHIFVLSPFGGETGLQMQNSNLNGPTLLPLRSVPWWSTSSYML-KQSYSPPPPPLITLSVVSRIK--NSTWLSTVRNAASSAAGKLPPPPGVVSAIFHSSVGNLQPTNLTVNALEHLMVYTPSGNVVQYELLHSVGGDQGESFLRNGTSSLEQVQDEELKVKASPVQWWDVCRRADWPEREEFIQGNVLGRQDSAETVICPYEYEDDGTKEKDTVKHHDQYHWYLSKAEVQIRSGRTPVWQKSKVYSYAMSSVSVEGGRPNLYSSGGEIEIEKLHAREIEIRRKDLLPVSDHFHQLHHKWANNRGINVRYSPSSSLSDEGNKYSDDEQALIPSSVDNLITGIRSSATDL--SKQEYHATMNSYPPFRPIDNENKGVKGSNFLPTQNSIGRAATSLSPEPSPSMISAFEECYVNNYSSISSKPSPSGGNIS-EEVLSSSSVVTGDVSNTSSKCTDSTMN-LPEELGHEDI-------HYFQEGYFESTSLDKFNQFNKHTTEVDRSTSHCNKADFEEDADSDDILGGVFAFSKEG 977
            T TNGF+P   K ISSCIKTVS+ VR++ A+      DDH  KDQVLWA FDRLELG S  K +LL+GYS+GFQVLDVEDASNV ELVSRRDD VTFLQMQPIPAK D REG+  S PLLLVVA ++++ S P+Q GRD  +    EP+ G++IH+PTAVRFYSLRSH+YVHVLRFRS VYMVRCS K+VAVGLAAQIYCFDALTLE+KFSVLTY VP+LGGQ ++GVNIGYGPMAVGPRWLAYASNNPLL NTGRLSPQSLSPSPGVSPSTSP NGNL+ARYAMESSK LA G+INLGDMG KT SKYCHELLPDGS+SPVS+ AS KVGR  AH  + D AG VVIKDFVSR V+SQFRAH+ PI+ALCFDPSGTLLVTAS +GNNINIFRIVP+   NG+G+ S DW +SHVHLYKLHRG+T AVIQDICFS  S W+AI+SS  T H+F+LSPFGGETGLQ+QNS+++GP LLP+ S PWWSTSS+M+ +QS++P P P ITLSVV+RIK  NS WL+TV NAASSAAGK+  P GV++A+FHSSV   QP     N LEHL+ YTPSG+++QYEL+ S GG+QG+S+LR GT+S+ Q+Q+++  VK   +QWWDVCRRADWPEREE I G  +G ++  + V+     EDD T EKD+ K  D+ HWYLS AEVQ++SGR PVWQKSK+Y   MS    E    +   S GEIEIEK+   E+EIRRKDLLPV DHFH++  KW                SD+ +    ++  +  +  D+L      S +       E      SYP       EN G++ S+         +    L  E SP+++ + EE YV N  S     S S   IS  EV SS+SVVT + SN+SS  +D +MN + E+  HEDI        +FQEGY ++++ ++ ++ N+   ++D S+S C+K   ++D +SDD+LGGVF FS+EG
Sbjct:   25 TNTNGFIPNSLKFISSCIKTVSTNVRSAGASVTGSVSDDH-RKDQVLWACFDRLELGLSSFKRVLLIGYSDGFQVLDVEDASNVCELVSRRDDPVTFLQMQPIPAKSDGREGYKKSHPLLLVVACDDSADSAPVQTGRDGFI----EPQGGSIIHSPTAVRFYSLRSHNYVHVLRFRSTVYMVRCSPKVVAVGLAAQIYCFDALTLENKFSVLTYPVPQLGGQGVTGVNIGYGPMAVGPRWLAYASNNPLLSNTGRLSPQSLSPSPGVSPSTSPGNGNLVARYAMESSKHLAAGLINLGDMGYKTLSKYCHELLPDGSNSPVSTSASWKVGRVPAHSPETDAAGMVVIKDFVSRGVISQFRAHSSPISALCFDPSGTLLVTASTRGNNINIFRIVPSCSPNGAGNQSSDWKASHVHLYKLHRGVTPAVIQDICFSHYSQWVAIISSRGTCHLFILSPFGGETGLQLQNSHVDGPILLPILSGPWWSTSSFMVNQQSFAPAPAP-ITLSVVNRIKNVNSGWLNTVSNAASSAAGKVSVPSGVLAAVFHSSVRREQPAPQNFNPLEHLLAYTPSGHLIQYELMPSFGGEQGDSYLRTGTASVVQMQEDDAGVKVDSIQWWDVCRRADWPEREECIHGITIGGREVTDIVMGDSLSEDDDTGEKDSAKLCDRSHWYLSNAEVQLKSGRIPVWQKSKIYFCTMSLSGYEEQELSRSFSAGEIEIEKIPVNEVEIRRKDLLPVFDHFHRIPSKW----------------SDDSSAMGKEDTTIGIARADSLSEKSFPSGSSHVPGLHEVGTGPISYPCIELSMEENDGLRSSSHTIAPQVSNKVQAGL--ESSPNILCSVEESYVLNSPSPPKIESFSTRGISAREVQSSNSVVTSEASNSSSNRSDMSMNIIDEQTVHEDICDPVDFGQFFQEGYCKASTNNELHEVNELVADMDSSSSPCDKEKTDDDGESDDMLGGVFDFSEEG 983
[Close]
BLAST of XM_017374902.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G3BUA1 ((Autophagy-related protein 18h {ECO:0000313|EMBL:PHU10042.1}) (Fragment))

HSP 1 Score: 1102.43 bits (2850), Expect = 0.000e+0
Identity = 590/1007 (58.59%), Postives = 729/1007 (72.39%), Query Frame = 0
 
Query:    3 RNQNNYINNSNKT---NTTATNGFLP---KLISSCIKTVSSAVR---ASVA---ADDHFHKDQVLWAGFDRLELGASVVKSLLLLGYSNGFQVLDVEDASNVTELVSRRDDAVTFLQMQPIPAKCDDREGFMDSLPLLLVVASEETSCSGPMQNGRDSSVRDKYEPRVGTVIHTPTAVRFYSLRSHSYVHVLRFRSAVYMVRCSSKIVAVGLAAQIYCFDALTLESKFSVLTYHVPRLGGQALSGVNIGYGPMAVGPRWLAYASNNPLLPNTGRLSPQSLSPSPGVSPSTSPSNGNLMARYAMESSKQLATGIINLGDMGIKTFSKYCHELLPDGSSSPVSSIASGKVGRTTAHLSDVDTAGTVVIKDFVSRAVVSQFRAHTCPIAALCFDPSGTLLVTASVKGNNINIFRIVPTYLQNGSGSHSYDWSSSHVHLYKLHRGITSAVIQDICFSPSSHWIAIVSSNHTGHIFVLSPFGGETGLQMQNSNLNGPTLLPLRSVPWWSTSSYML-KQSYSPPPPPLITLSVVSRIK--NSTWLSTVRNAASSAAGKLPPPPGVVSAIFHSSVGNLQPTNLTVNALEHLMVYTPSGNVVQYELLHSVGGDQGESFLRNGTSSLEQVQDEELKVKASPVQWWDVCRRADWPEREEFIQGNVLGRQDSAETVICPYEYEDDGTKEKDTVKHHDQYHWYLSKAEVQIRSGRTPVWQKSKVYSYAMSSVSVEGGRPNLYSSGGEIEIEKLHAREIEIRRKDLLPVSDHFHQLHHKWANNRGINVRYSPSSSLSDEGNKYSDDEQALIPSSVDNLITGIRSSATDLSKQEYHATMN--SYPPFRPIDNENKGVKGSNFLPTQNSIGRAATSLSPEPSPSMISAFEECYVNNYSSISSKPSP-------SGGNISEEVLSSSSVVTGDVSNTSSKCTDSTMN-LPEELGHEDI-------HYFQEGYFESTSLDKFNQFNKHTTEVDRSTSHCNKADFEEDADSDDILGGVFAFSKEG 977
            ++QN    NS+K+   N T TNGFLP   K ISSCIKTVSS VR   ASVA   +DDH  KDQVLWA FDRLELG S  K +LL+GYS+GFQVLDVEDASNV ELVSRRDD VTFLQMQPIPAK D REG+  S PLLLVVA ++T  S P Q GRD  V    EP+ G++IH+PTAVRFYSLRSH+YVHVLRFRS +YMVRCS K+VAVGLAAQIYCFDALTLE+KFSVLTY VP+LGGQ ++GVNIGYGPM VGPRWLAYASNNPLL NTGRLSPQSLSPSPGVSPSTSP NGNL+ARYAMESSK LA G+INLGDMG KT SKYCHELLPDG +SP+S+  S KVGR  AH ++ D AG VVIKDFVSR V+S FRAHT PI+ALCFDP+GTLLVTAS +GNNINIFRIVP+   NG+G+ + DW +SHVHLYKLHRG+T AVIQDICFS  S W+AI+SS  T H+FVLSPFGGETGL +QNS ++GP LLP+ + PWWSTSS+++ +QS++PPP P ITLSVV+RIK  NS WL+TV NAASSAAGK+  P GV++A+FHSSV   QP     NALEHL+ YTPSG+++QYEL+ S GG+QG+S+LR G++S+ Q+Q+++  VK  P+QWWDVCRRADWPEREE I G  LG +++ + ++     EDD T EKD  K  D+  WYLS AEVQ++SGR P+WQKSK+Y   MS    E      +++ GEIEIEK+   E+EIRRKDLLPV DHFH++  KW+++         SSS+  E  K  D    +  S  D+L      S +      + A M   SYP       E+  ++ S++        +   +L  E SP+++ + EE YV N       PSP       +GG  + EV SS+SV+T + SN+SS  +D +MN + E+  HEDI        +FQEGY ++++ ++ N+  +   ++DRS+  CNK   ++D +SDD+LGGVF FS+EG
Sbjct:   23 KSQNYNSGNSSKSKVKNGTNTNGFLPNSLKFISSCIKTVSSNVRSAGASVAGASSDDH-RKDQVLWACFDRLELGLSSFKRVLLIGYSDGFQVLDVEDASNVCELVSRRDDPVTFLQMQPIPAKSDGREGYKKSHPLLLVVACDDTKNSAPSQTGRDGFV----EPQGGSIIHSPTAVRFYSLRSHNYVHVLRFRSTIYMVRCSPKVVAVGLAAQIYCFDALTLENKFSVLTYPVPQLGGQGVTGVNIGYGPMTVGPRWLAYASNNPLLSNTGRLSPQSLSPSPGVSPSTSPGNGNLVARYAMESSKHLAAGLINLGDMGYKTLSKYCHELLPDGGNSPLSTSPSWKVGRLPAHSTETDAAGMVVIKDFVSREVISHFRAHTSPISALCFDPTGTLLVTASTRGNNINIFRIVPS-CSNGAGNQNSDWKASHVHLYKLHRGVTPAVIQDICFSHYSQWVAIISSRGTCHLFVLSPFGGETGLHLQNSYVDGPILLPILTGPWWSTSSFLVNQQSFAPPPAP-ITLSVVNRIKNGNSGWLNTVSNAASSAAGKVSVPSGVLAAVFHSSVRREQPAPRNFNALEHLLAYTPSGHLIQYELMPSFGGEQGDSYLRTGSASVVQMQEDDTGVKVDPIQWWDVCRRADWPEREECIHGITLGGRETTDILMGDSISEDD-TGEKDLAKLCDRSRWYLSNAEVQLKSGRIPIWQKSKIYFCTMSLSGYEEQDIRSFTA-GEIEIEKIPINEVEIRRKDLLPVFDHFHRILSKWSDD---------SSSIGKE--KLGDTSSGI--SRADSLSAKSFPSGSSQVPGLHEAGMGPISYPSIELSMEESDELRDSSYTVAPQVSEKVQAAL--ESSPNILCSIEESYVVN------SPSPPKSGSLSTGGTSAREVQSSNSVITSEGSNSSSNRSDMSMNIIDEQTVHEDICDPVDFGQFFQEGYCKASTNNELNEVTELVADMDRSSGPCNKEKPDDDGESDDMLGGVFDFSEEG 999
[Close]
BLAST of XM_017374902.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G2W7L5 ((Autophagy-related protein 18h {ECO:0000313|EMBL:PHT41189.1}) (Fragment))

HSP 1 Score: 1098.96 bits (2841), Expect = 0.000e+0
Identity = 589/1007 (58.49%), Postives = 728/1007 (72.29%), Query Frame = 0
 
Query:    3 RNQNNYINNSNKT---NTTATNGFLP---KLISSCIKTVSSAVR---ASVA---ADDHFHKDQVLWAGFDRLELGASVVKSLLLLGYSNGFQVLDVEDASNVTELVSRRDDAVTFLQMQPIPAKCDDREGFMDSLPLLLVVASEETSCSGPMQNGRDSSVRDKYEPRVGTVIHTPTAVRFYSLRSHSYVHVLRFRSAVYMVRCSSKIVAVGLAAQIYCFDALTLESKFSVLTYHVPRLGGQALSGVNIGYGPMAVGPRWLAYASNNPLLPNTGRLSPQSLSPSPGVSPSTSPSNGNLMARYAMESSKQLATGIINLGDMGIKTFSKYCHELLPDGSSSPVSSIASGKVGRTTAHLSDVDTAGTVVIKDFVSRAVVSQFRAHTCPIAALCFDPSGTLLVTASVKGNNINIFRIVPTYLQNGSGSHSYDWSSSHVHLYKLHRGITSAVIQDICFSPSSHWIAIVSSNHTGHIFVLSPFGGETGLQMQNSNLNGPTLLPLRSVPWWSTSSYML-KQSYSPPPPPLITLSVVSRIK--NSTWLSTVRNAASSAAGKLPPPPGVVSAIFHSSVGNLQPTNLTVNALEHLMVYTPSGNVVQYELLHSVGGDQGESFLRNGTSSLEQVQDEELKVKASPVQWWDVCRRADWPEREEFIQGNVLGRQDSAETVICPYEYEDDGTKEKDTVKHHDQYHWYLSKAEVQIRSGRTPVWQKSKVYSYAMSSVSVEGGRPNLYSSGGEIEIEKLHAREIEIRRKDLLPVSDHFHQLHHKWANNRGINVRYSPSSSLSDEGNKYSDDEQALIPSSVDNLITGIRSSATDLSKQEYHATMN--SYPPFRPIDNENKGVKGSNFLPTQNSIGRAATSLSPEPSPSMISAFEECYVNNYSSISSKPSP-------SGGNISEEVLSSSSVVTGDVSNTSSKCTDSTMN-LPEELGHEDI-------HYFQEGYFESTSLDKFNQFNKHTTEVDRSTSHCNKADFEEDADSDDILGGVFAFSKEG 977
            ++QNN   NS+K+   N T TNGFLP   K ISSCIKTVSS VR   ASVA   +DDH  KDQVLWA FDRLELG S  K +LL+GYS+GFQVLDVEDASNV ELVSRRDD VTFLQMQPIPAK D REG+  S PLLLVVA ++T  S P Q GRD  V    EP+ G++IH+PTAVRFYSLRSH+YVHVLRFRS +YMVRCS K+VAVGLAAQIYCFDALTLE+KFSVLTY VP+LGGQ ++GVNIGYGPM VGPRWLAYASNNPLL NTGRLSPQSLSPSPGVSPSTSP NGNL+ARYAMESSK LA G+INLGDMG KT SKYCHELLPDG +SP+S+  S KVGR  AH ++ D AG VVIKDFVSR V+S FRAHT PI+ALCFDPSGTLLVTAS +GNNINIFRIVP+   NG+G+ + DW +SHVHLYKLHRG+T AVIQDICFS  S W+AI+SS  T H+FVLSPFGGETGL +QNS ++GP LLP+ + PWWSTSS+++ +QS++PPP P ITLSVV+RIK  NS WL+TV NAASSAAGK+  P GV++A+FHSSV   QP     NALEHL+ YTPSG+++QYEL+ S GG+QG+S+LR G++S+ Q+Q+++  VK  P+QWWDVCRRADWPEREE I G  LG  ++ + ++     EDD T E+D+ K  D+  WYLS AEVQ++SGR P+WQKSK+Y   MS    E      +++ GE EIEK+   E+EIRRKDLLPV DHFH++  KW+++         SSS+  E  K  D    +  S  D+L      S +      + A M   SYP       E+  ++ S++        +   +L  E SP+++ + EE YV N       PSP       +GG  + EV SS+SV+T + SN+SS  +D +MN + E+  HEDI        +FQEGY ++++ ++ N+  +   ++D S+  CNK   ++D +SDD+LGGVF FS+EG
Sbjct:   23 KSQNNSGGNSSKSKVKNGTNTNGFLPNSLKFISSCIKTVSSNVRSAGASVAGASSDDH-RKDQVLWACFDRLELGLSSFKRVLLIGYSDGFQVLDVEDASNVCELVSRRDDPVTFLQMQPIPAKSDGREGYQKSHPLLLVVACDDTKDSAPSQTGRDGLV----EPQGGSIIHSPTAVRFYSLRSHNYVHVLRFRSTIYMVRCSPKVVAVGLAAQIYCFDALTLENKFSVLTYPVPQLGGQGVTGVNIGYGPMTVGPRWLAYASNNPLLSNTGRLSPQSLSPSPGVSPSTSPGNGNLVARYAMESSKHLAAGLINLGDMGYKTLSKYCHELLPDGGNSPLSTSPSWKVGRLPAHSTETDAAGMVVIKDFVSREVISHFRAHTSPISALCFDPSGTLLVTASTRGNNINIFRIVPS-CSNGAGNQNSDWKASHVHLYKLHRGVTPAVIQDICFSHYSQWVAIISSRGTCHLFVLSPFGGETGLHLQNSYVDGPILLPILTGPWWSTSSFLVNQQSFAPPPAP-ITLSVVNRIKNGNSGWLNTVSNAASSAAGKVSVPSGVLAAVFHSSVRREQPAPRNFNALEHLLAYTPSGHLIQYELMPSFGGEQGDSYLRTGSASVVQMQEDDTGVKVDPIQWWDVCRRADWPEREECIHGITLGGCETTDILMGDSISEDD-TGEQDSAKLCDRSRWYLSNAEVQLKSGRIPIWQKSKIYFCTMSLSGYEEQDIRSFAA-GETEIEKIPINEVEIRRKDLLPVFDHFHRIPSKWSDD---------SSSIGKE--KLGDTSSGI--SRADSLSAKSFPSGSSQVPGLHEAGMGPISYPSIELSMEESDELRNSSYTVAPQVSEKVQAAL--ESSPNILCSIEESYVVN------SPSPPKSGSLSTGGTSAREVQSSNSVITSEGSNSSSNRSDMSMNIIDEQTVHEDICDPVDFGQFFQEGYCKASTNNELNEVTELVADMDSSSGPCNKEKPDDDGESDDMLGGVFDFSEEG 999
[Close]
BLAST of XM_017374902.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G2YZ81 ((Autophagy-related protein 18h {ECO:0000313|EMBL:PHT75039.1}) (Fragment))

HSP 1 Score: 1098.19 bits (2839), Expect = 0.000e+0
Identity = 585/991 (59.03%), Postives = 720/991 (72.65%), Query Frame = 0
 
Query:   16 NTTATNGFLP---KLISSCIKTVSSAVR---ASVA---ADDHFHKDQVLWAGFDRLELGASVVKSLLLLGYSNGFQVLDVEDASNVTELVSRRDDAVTFLQMQPIPAKCDDREGFMDSLPLLLVVASEETSCSGPMQNGRDSSVRDKYEPRVGTVIHTPTAVRFYSLRSHSYVHVLRFRSAVYMVRCSSKIVAVGLAAQIYCFDALTLESKFSVLTYHVPRLGGQALSGVNIGYGPMAVGPRWLAYASNNPLLPNTGRLSPQSLSPSPGVSPSTSPSNGNLMARYAMESSKQLATGIINLGDMGIKTFSKYCHELLPDGSSSPVSSIASGKVGRTTAHLSDVDTAGTVVIKDFVSRAVVSQFRAHTCPIAALCFDPSGTLLVTASVKGNNINIFRIVPTYLQNGSGSHSYDWSSSHVHLYKLHRGITSAVIQDICFSPSSHWIAIVSSNHTGHIFVLSPFGGETGLQMQNSNLNGPTLLPLRSVPWWSTSSYML-KQSYSPPPPPLITLSVVSRIK--NSTWLSTVRNAASSAAGKLPPPPGVVSAIFHSSVGNLQPTNLTVNALEHLMVYTPSGNVVQYELLHSVGGDQGESFLRNGTSSLEQVQDEELKVKASPVQWWDVCRRADWPEREEFIQGNVLGRQDSAETVICPYEYEDDGTKEKDTVKHHDQYHWYLSKAEVQIRSGRTPVWQKSKVYSYAMSSVSVEGGRPNLYSSGGEIEIEKLHAREIEIRRKDLLPVSDHFHQLHHKWANNRGINVRYSPSSSLSDEGNKYSDDEQALIPSSVDNLITGIRSSATDLSKQEYHATMN--SYPPFRPIDNENKGVKGSNFLPTQNSIGRAATSLSPEPSPSMISAFEECYVNNYSSISSKPSP-------SGGNISEEVLSSSSVVTGDVSNTSSKCTDSTMN-LPEELGHEDI-------HYFQEGYFESTSLDKFNQFNKHTTEVDRSTSHCNKADFEEDADSDDILGGVFAFSKEG 977
            N T TNGFLP   K ISSCIKTVSS VR   ASVA   +DDH  KDQVLWA FDRLELG S  K +LL+GYS+GFQVLDVEDASNV ELVSRRDD VTFLQMQPIPAK D REG+  S PLLLVVA ++T  S P Q GRD  V    EP+ G++IH+PTAVRFYSLRSH+YVHVLRFRS +YMVRCS K+VAVGLAAQIYCFDALTLE+KFSVLTY VP+LGGQ ++GVNIGYGPM VGPRWLAYASNNPLL NTGRLSPQSLSPSPGVSPSTSP NGNL+ARYAMESSK LA G+INLGDMG KT SKYCHELLPDG +SP+S+  S KVGR  AH ++ D AG VVIKDFVSR V+S FRAHT PI+ALCFDPSGTLLVTAS +GNNINIFRIVP+   NG+G+ + DW +SHVHLYKLHRG+T AVIQDICFS  S W+AI+SS  T H+FVLSPFGGETGL +QNS ++GP LLP+ + PWWSTSS+++ +QS++PPP P ITLSVV+RIK  NS WL+TV NAASSAAGK+  P GV++A+FHSSV   QP     NALEHL+ YTPSG+++QYEL+ S GG+QG+S+LR G++S+ Q+Q+++  VK  P+QWWDVCRRADWPEREE I G  LG +++ + ++     EDD T EKD+ K  D+  WYLS AEVQ++SGR P+WQKSK+Y   MS    E      +++ GEIE EK+   E+EIRRKDLLPV DHFH++  KW+++         SSS+  E  K  D    +  S  D+L      S +      + A M   SYP       E+  ++ S++        +   +L  E SP+++ + EE YV N       PSP       +GG  + EV SS+SV+T + SN+SS  +D +MN + E+  HEDI        +FQEGY ++++ ++ N+  +   ++DRS+  CNK   ++D +SDD+LGGVF FS+EG
Sbjct:   34 NGTNTNGFLPNSLKFISSCIKTVSSNVRSAGASVAGASSDDH-RKDQVLWACFDRLELGLSSFKQVLLIGYSDGFQVLDVEDASNVCELVSRRDDPVTFLQMQPIPAKSDGREGYKKSHPLLLVVACDDTKDSAPSQTGRDGFV----EPQGGSIIHSPTAVRFYSLRSHNYVHVLRFRSTIYMVRCSPKVVAVGLAAQIYCFDALTLENKFSVLTYPVPQLGGQGVTGVNIGYGPMTVGPRWLAYASNNPLLSNTGRLSPQSLSPSPGVSPSTSPGNGNLVARYAMESSKHLAAGLINLGDMGYKTLSKYCHELLPDGGNSPLSTSPSWKVGRLPAHSTETDAAGMVVIKDFVSREVISHFRAHTSPISALCFDPSGTLLVTASTRGNNINIFRIVPS-CSNGAGNQNSDWKASHVHLYKLHRGVTPAVIQDICFSHYSQWVAIISSRGTCHLFVLSPFGGETGLHLQNSYVDGPILLPILTGPWWSTSSFLVNQQSFAPPPAP-ITLSVVNRIKNGNSGWLNTVSNAASSAAGKVSVPSGVLAAVFHSSVRREQPAPRNFNALEHLLAYTPSGHLIQYELMPSFGGEQGDSYLRTGSASVVQMQEDDTGVKVDPIQWWDVCRRADWPEREECIHGITLGGRETTDILMGDSISEDD-TGEKDSAKLCDRSRWYLSNAEVQLKSGRIPIWQKSKIYFCTMSLSGYEEQDIRSFAA-GEIEFEKIPINEVEIRRKDLLPVFDHFHRILSKWSDD---------SSSIGKE--KLGDTSSGI--SRADSLSAKSFPSGSSQVPGLHEAGMGPISYPSIELSMEESDELRDSSYTVAPQVSEKVQAAL--ESSPNILCSIEESYVVN------SPSPPKSGSLSTGGTSAREVQSSNSVITSEGSNSSSNRSDMSMNIIDEQTVHEDICDPVDFGQFFQEGYCKASTNNELNEVTELVADMDRSSGPCNKEKPDDDGESDDMLGGVFDFSEEG 994
[Close]
BLAST of XM_017374902.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U8DU46 ((autophagy-related protein 18h {ECO:0000313|RefSeq:XP_016538528.1}))

HSP 1 Score: 1098.19 bits (2839), Expect = 0.000e+0
Identity = 585/991 (59.03%), Postives = 720/991 (72.65%), Query Frame = 0
 
Query:   16 NTTATNGFLP---KLISSCIKTVSSAVR---ASVA---ADDHFHKDQVLWAGFDRLELGASVVKSLLLLGYSNGFQVLDVEDASNVTELVSRRDDAVTFLQMQPIPAKCDDREGFMDSLPLLLVVASEETSCSGPMQNGRDSSVRDKYEPRVGTVIHTPTAVRFYSLRSHSYVHVLRFRSAVYMVRCSSKIVAVGLAAQIYCFDALTLESKFSVLTYHVPRLGGQALSGVNIGYGPMAVGPRWLAYASNNPLLPNTGRLSPQSLSPSPGVSPSTSPSNGNLMARYAMESSKQLATGIINLGDMGIKTFSKYCHELLPDGSSSPVSSIASGKVGRTTAHLSDVDTAGTVVIKDFVSRAVVSQFRAHTCPIAALCFDPSGTLLVTASVKGNNINIFRIVPTYLQNGSGSHSYDWSSSHVHLYKLHRGITSAVIQDICFSPSSHWIAIVSSNHTGHIFVLSPFGGETGLQMQNSNLNGPTLLPLRSVPWWSTSSYML-KQSYSPPPPPLITLSVVSRIK--NSTWLSTVRNAASSAAGKLPPPPGVVSAIFHSSVGNLQPTNLTVNALEHLMVYTPSGNVVQYELLHSVGGDQGESFLRNGTSSLEQVQDEELKVKASPVQWWDVCRRADWPEREEFIQGNVLGRQDSAETVICPYEYEDDGTKEKDTVKHHDQYHWYLSKAEVQIRSGRTPVWQKSKVYSYAMSSVSVEGGRPNLYSSGGEIEIEKLHAREIEIRRKDLLPVSDHFHQLHHKWANNRGINVRYSPSSSLSDEGNKYSDDEQALIPSSVDNLITGIRSSATDLSKQEYHATMN--SYPPFRPIDNENKGVKGSNFLPTQNSIGRAATSLSPEPSPSMISAFEECYVNNYSSISSKPSP-------SGGNISEEVLSSSSVVTGDVSNTSSKCTDSTMN-LPEELGHEDI-------HYFQEGYFESTSLDKFNQFNKHTTEVDRSTSHCNKADFEEDADSDDILGGVFAFSKEG 977
            N T TNGFLP   K ISSCIKTVSS VR   ASVA   +DDH  KDQVLWA FDRLELG S  K +LL+GYS+GFQVLDVEDASNV ELVSRRDD VTFLQMQPIPAK D REG+  S PLLLVVA ++T  S P Q GRD  V    EP+ G++IH+PTAVRFYSLRSH+YVHVLRFRS +YMVRCS K+VAVGLAAQIYCFDALTLE+KFSVLTY VP+LGGQ ++GVNIGYGPM VGPRWLAYASNNPLL NTGRLSPQSLSPSPGVSPSTSP NGNL+ARYAMESSK LA G+INLGDMG KT SKYCHELLPDG +SP+S+  S KVGR  AH ++ D AG VVIKDFVSR V+S FRAHT PI+ALCFDPSGTLLVTAS +GNNINIFRIVP+   NG+G+ + DW +SHVHLYKLHRG+T AVIQDICFS  S W+AI+SS  T H+FVLSPFGGETGL +QNS ++GP LLP+ + PWWSTSS+++ +QS++PPP P ITLSVV+RIK  NS WL+TV NAASSAAGK+  P GV++A+FHSSV   QP     NALEHL+ YTPSG+++QYEL+ S GG+QG+S+LR G++S+ Q+Q+++  VK  P+QWWDVCRRADWPEREE I G  LG +++ + ++     EDD T EKD+ K  D+  WYLS AEVQ++SGR P+WQKSK+Y   MS    E      +++ GEIE EK+   E+EIRRKDLLPV DHFH++  KW+++         SSS+  E  K  D    +  S  D+L      S +      + A M   SYP       E+  ++ S++        +   +L  E SP+++ + EE YV N       PSP       +GG  + EV SS+SV+T + SN+SS  +D +MN + E+  HEDI        +FQEGY ++++ ++ N+  +   ++DRS+  CNK   ++D +SDD+LGGVF FS+EG
Sbjct:   19 NGTNTNGFLPNSLKFISSCIKTVSSNVRSAGASVAGASSDDH-RKDQVLWACFDRLELGLSSFKQVLLIGYSDGFQVLDVEDASNVCELVSRRDDPVTFLQMQPIPAKSDGREGYKKSHPLLLVVACDDTKDSAPSQTGRDGFV----EPQGGSIIHSPTAVRFYSLRSHNYVHVLRFRSTIYMVRCSPKVVAVGLAAQIYCFDALTLENKFSVLTYPVPQLGGQGVTGVNIGYGPMTVGPRWLAYASNNPLLSNTGRLSPQSLSPSPGVSPSTSPGNGNLVARYAMESSKHLAAGLINLGDMGYKTLSKYCHELLPDGGNSPLSTSPSWKVGRLPAHSTETDAAGMVVIKDFVSREVISHFRAHTSPISALCFDPSGTLLVTASTRGNNINIFRIVPS-CSNGAGNQNSDWKASHVHLYKLHRGVTPAVIQDICFSHYSQWVAIISSRGTCHLFVLSPFGGETGLHLQNSYVDGPILLPILTGPWWSTSSFLVNQQSFAPPPAP-ITLSVVNRIKNGNSGWLNTVSNAASSAAGKVSVPSGVLAAVFHSSVRREQPAPRNFNALEHLLAYTPSGHLIQYELMPSFGGEQGDSYLRTGSASVVQMQEDDTGVKVDPIQWWDVCRRADWPEREECIHGITLGGRETTDILMGDSISEDD-TGEKDSAKLCDRSRWYLSNAEVQLKSGRIPIWQKSKIYFCTMSLSGYEEQDIRSFAA-GEIEFEKIPINEVEIRRKDLLPVFDHFHRILSKWSDD---------SSSIGKE--KLGDTSSGI--SRADSLSAKSFPSGSSQVPGLHEAGMGPISYPSIELSMEESDELRDSSYTVAPQVSEKVQAAL--ESSPNILCSIEESYVVN------SPSPPKSGSLSTGGTSAREVQSSNSVITSEGSNSSSNRSDMSMNIIDEQTVHEDICDPVDFGQFFQEGYCKASTNNELNEVTELVADMDRSSGPCNKEKPDDDGESDDMLGGVFDFSEEG 979
[Close]
BLAST of XM_017374902.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0FW57 ((Autophagy 18h-like protein {ECO:0000313|EMBL:GFZ02922.1}))

HSP 1 Score: 1092.8 bits (2825), Expect = 0.000e+0
Identity = 603/995 (60.60%), Postives = 726/995 (72.96%), Query Frame = 0
 
Query:   12 SNKTNTTATNGFLP---KLISSCIKTVSSAVR---ASVAAD--DHFHKDQVLWAGFDRLELGASVVKSLLLLGYSNGFQVLDVEDASNVTELVSRRDDAVTFLQMQPIPAKCDDREGFMDSLPLLLVVASEETSCSGPMQNGRDSSVRDKY-EPRVGTVIHTPTAVRFYSLRSHSYVHVLRFRSAVYMVRCSSKIVAVGLAAQIYCFDALTLESKFSVLTYHVPRLGGQALSGVNIGYGPMAVGPRWLAYASNNPLLPNTGRLSPQSLSPSPGVSPSTSPSNGNLMARYAMESSKQLATGIINLGDMGIKTFSKYCHELLPDGSSSPVSSIASGKVGRTTAHLSDVDTAGTVVIKDFVSRAVVSQFRAHTCPIAALCFDPSGTLLVTASVKGNNINIFRIVPTYLQNGSGSHSYDWSSSHVHLYKLHRGITSAVIQDICFSPSSHWIAIVSSNHTGHIFVLSPFGGETGLQMQNSNLNGPTLLPLRSVPWWSTSSYMLKQSYSPPPPPLITLSVVSRIK--NSTWLSTVRNAASSAAGKLPPPPGVVSAIFHSSV-GNLQPTNLTVNALEHLMVYTPSGNVVQYELLHSVGGDQGESFLRNGTSSLEQVQDEELKVKASPVQWWDVCRRADWPEREEFIQGNVLGRQDSAETVICPYEYEDDGTKEKDTVKHHDQYHWYLSKAEVQIRSGRTPVWQKSKVYSYAMSSVSVEGGRPNLYSS--GGEIEIEKLHAREIEIRRKDLLPVSDHFHQLHHKWANNRGI-NVRYSPSSSLSDEGNKYSDDEQALIPSSVDNLITGIRSSATDLSKQEYHATMNSYPPFRPIDNENKGVKGSN------FLPTQNSIGRAATSLSPEPSPSMISAFEECYVNNYSSISSKPSPSGGNISEEVLSSSSVVTGDVSNTSSKCTDSTMNLPEELG-HEDI-------HYFQEGYFESTSLDKFNQFNKHTTEVDRSTSHCNKADFEEDADSDDILGGVFAFSKEG 977
            SNK+ TT  NGF P   + ISSC+KTVSS VR   ASVA    D   KDQVLWA FD++ELG S+++ +LLLGYSNGFQVLDVEDA N +ELVSRRDD VTFLQMQPIP+K + +EGF+ S P+LLVVAS+ET  SGP+QN RD  VRD Y EP++G ++++PT VRFYSLRSH+YVHVLRFRS VYMVRCS +IVAVGLAAQIYCFDALTLESKFSVLTY VP+L    L GVNIGYGPMAVGPRWLAYASNNPL  NTGRLSPQSLSPSPGVSPSTSP NG+L+ARYAMESSKQLA+G++NLGD G KTF+KY H+LLPDGS+SP+SS +  KVGR     ++ DTAG VVI+DFVS++VVSQFRAHT PI+ALCFDPSGTLLVTASV GNNINIFRI+P+  QNGSG+ SYDWSSSHVHLYKLHRG+TSAVIQDICFS  S W+AIVSS  T HIFVLSPFGGETGLQ+QNS+++GP+L+P+ S PWWS+SS M+ Q   P PP  ITLSVVSRI+  NS WL+TV NAASSAAGK+  P G V+AIFHSSV  ++QP   TVNALEHL+VY+PSG V+QYELL SVGG+Q ES  R G   L Q+Q+EEL+VK  PVQWWDVCRR DW E+EE I G  +       T +   +YED+ T EKD VK H+   WYLS AEVQI SG+ PVWQKSK+  + +S +  E    NL     G E EIEK   RE+EI++KDLLPV D FH++H +W+++RG+   +YS SSS +  G +   +  +  P+ V +L         D+ +   H  +++        NEN GVKG N          + S  RA  S SPEPS S IS FEE YV    S S     +G  I+ E  SSSSVVT + SN SS C+D +MNL +E   HED+        YF+EGY ++++  +  +  +  T+ D S S C+K  +EED D DD+LGGVFAFS+EG
Sbjct:  487 SNKSTTT--NGFFPNSLRFISSCLKTVSSNVRSAGASVAGSITDEHRKDQVLWAFFDKVELGPSLIRHVLLLGYSNGFQVLDVEDAPNFSELVSRRDDPVTFLQMQPIPSKSEGQEGFITSHPMLLVVASDETRSSGPIQNARDVLVRDGYVEPQMGNLLNSPTVVRFYSLRSHNYVHVLRFRSTVYMVRCSPRIVAVGLAAQIYCFDALTLESKFSVLTYPVPQLVSPGLVGVNIGYGPMAVGPRWLAYASNNPLSSNTGRLSPQSLSPSPGVSPSTSPGNGSLVARYAMESSKQLASGLMNLGDKGYKTFTKYYHDLLPDGSNSPMSSNSGWKVGRAATQSTETDTAGMVVIRDFVSKSVVSQFRAHTSPISALCFDPSGTLLVTASVHGNNINIFRIMPS--QNGSGTRSYDWSSSHVHLYKLHRGMTSAVIQDICFSRYSQWVAIVSSRGTCHIFVLSPFGGETGLQIQNSHVDGPSLIPVLSQPWWSSSSLMMSQQSCPSPPAPITLSVVSRIRLGNSGWLNTVSNAASSAAGKVSVPSGSVAAIFHSSVHHHMQPAPSTVNALEHLLVYSPSGTVIQYELLPSVGGEQVESTSRTGAGPLVQMQEEELRVKFGPVQWWDVCRRVDWLEKEECIYG--IDPDGQEVTTMDASDYEDNDTGEKDLVKQHEHSRWYLSNAEVQIPSGKIPVWQKSKICFFRISLLGDE--EQNLIKDHIGRETEIEKFSVREVEIKQKDLLPVFDRFHRIHSEWSDDRGLGGGKYSTSSSTAHGGKEKFSEGSSGTPAVVHDL------DQADILRPYPHIVLDA--------NENDGVKGKNDAALLSHAVNRRSFNRADLSTSPEPSASGISVFEENYVMTGPSSSKTALSTGKTIAREGHSSSSVVTSEASNASSNCSDLSMNLIDEGPVHEDVQDPIDFGQYFEEGYCKASTHVECTELTEAVTDADSSNSLCDKEKYEEDGDDDDMLGGVFAFSEEG 1459
[Close]
BLAST of XM_017374902.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A0V0IXM6 ((Putative autophagy-related protein 18h-like {ECO:0000313|EMBL:JAP37287.1}))

HSP 1 Score: 1088.56 bits (2814), Expect = 0.000e+0
Identity = 583/989 (58.95%), Postives = 714/989 (72.19%), Query Frame = 0
 
Query:   18 TATNGFLP---KLISSCIKTVSSAVR---ASVA---ADDHFHKDQVLWAGFDRLELGASVVKSLLLLGYSNGFQVLDVEDASNVTELVSRRDDAVTFLQMQPIPAKCDDREGFMDSLPLLLVVASEETSCSGPMQNGRDSSVRDKYEPRVGTVIHTPTAVRFYSLRSHSYVHVLRFRSAVYMVRCSSKIVAVGLAAQIYCFDALTLESKFSVLTYHVPRLGGQALSGVNIGYGPMAVGPRWLAYASNNPLLPNTGRLSPQSLSPSPGVSPSTSPSNGNLMARYAMESSKQLATGIINLGDMGIKTFSKYCHELLPDGSSSPVSSIASGKVGRTTAHLSDVDTAGTVVIKDFVSRAVVSQFRAHTCPIAALCFDPSGTLLVTASVKGNNINIFRIVPTYLQNGSGSHSYDWSSSHVHLYKLHRGITSAVIQDICFSPSSHWIAIVSSNHTGHIFVLSPFGGETGLQMQNSNLNGPTLLPLRSVPWWSTSSYML-KQSYSPPPPPLITLSVVSRIK--NSTWLSTVRNAASSAAGKLPPPPGVVSAIFHSSVGNLQPTNLTVNALEHLMVYTPSGNVVQYELLHSVGGDQGESFLRNGTSSLEQVQDEELKVKASPVQWWDVCRRADWPEREEFIQGNVLGRQDSAETVICPYEYEDDGTKEKDTVKHHDQYHWYLSKAEVQIRSGRTPVWQKSKVYSYAMSSVSVEGGRPNLYSSGGEIEIEKLHAREIEIRRKDLLPVSDHFHQLHHKWANNRGINVRYSPSSSLSDEGNKYSDDEQALIPSSVDNLITGIRSSATDLSKQEYHATMN--SYPPFRPIDNENKGVKGSNFLPTQNSIGRAATSLSPEPSPSMISAFEECYVNNYSSISSKPSP-------SGGNISEEVLSSSSVVTGDVSNTSSKCTDSTMN-LPEELGHEDI-------HYFQEGYFESTSLDKFNQFNKHTTEVDRSTSHCNKADFEEDADSDDILGGVFAFSKEG 977
            T+T+GFLP   K ISSCIKTVSS VR   ASVA   +DDH  KDQVLWA FDRLELG S  K +LL+GYS+GFQVLDVEDASNV ELVSRRDD VTFLQMQPIPAK    EG+  S PLLLVVA ++T  S P Q GRD  V    E + G++ H PT VRFYSLRSH+YVHVLRFRS VYMVRCS K+VAVGLAAQIYCFDALTLE+KFSVLTY VP+LGGQ ++GVNIGYGPMAVGPRWLAYASNNPLL NTGRLSPQSLSPSPGVSPSTSP NGNL+ARYAMESSK LA G+INLGDMG KT SKYCHELLPDGS+SPVS+ AS K GR  AH ++ D AG VVIKDFVSRAV+SQFRAHT PI+ALCFDPSGTLLVTAS +GNNIN+FRIVP+   NG+GS S DW +SHVHLYKLHRG+T AVIQDICFS  S W+AI+SS  T H+FVLSPFGGETGLQ+QNS ++GP L P+ S PWWSTSS+++ +QS++  P P ITLSVV+RIK  NS WL+TV NAASSAAGK+  P GV++A FHSSV   QP   ++NALEHL+ YTPSG+++QYEL+ S GG++G+S+LR  T S+ Q+Q+++  VK  P+QWWDVCRRADWPEREE I G  LG +++ + V+     EDD  +EKD  K  D+ HWYLS AEVQ++SGR P+WQKSK+Y   MS    E    +  S+ GEIEIEK+H  E+E+RRKDLLPV DHFH++  KW+++         SSS+  E  K  D    +  S  D+L      S +    + +   M   SYP       E+ G + S++             L  E SP+++ + EE YV N       PSP       +GG  + EV SS+SV+T + SN+SS  +D +MN + E+  +EDI        +FQEGY ++++ ++ ++  +   ++D S+S CNK   ++D +SDD+LGGVF F +EG
Sbjct:   23 TSTHGFLPNSLKFISSCIKTVSSNVRTAGASVAGSSSDDH-RKDQVLWACFDRLELGLSSFKRVLLIGYSDGFQVLDVEDASNVCELVSRRDDPVTFLQMQPIPAKSGGNEGYKKSHPLLLVVACDDTKDSAPTQTGRDGFV----ESQGGSISHAPTVVRFYSLRSHNYVHVLRFRSTVYMVRCSPKVVAVGLAAQIYCFDALTLENKFSVLTYPVPQLGGQGVTGVNIGYGPMAVGPRWLAYASNNPLLSNTGRLSPQSLSPSPGVSPSTSPGNGNLVARYAMESSKHLAAGLINLGDMGYKTLSKYCHELLPDGSNSPVSTSASWKXGRVPAHSTETDAAGMVVIKDFVSRAVISQFRAHTSPISALCFDPSGTLLVTASTRGNNINLFRIVPS-CSNGAGSQSSDWKASHVHLYKLHRGVTPAVIQDICFSHYSQWVAIISSRGTCHLFVLSPFGGETGLQLQNSYVDGPILQPILSGPWWSTSSFLVNQQSFAAAPAP-ITLSVVNRIKNVNSGWLNTVSNAASSAAGKVSVPSGVLAADFHSSVRREQPAPKSLNALEHLLAYTPSGHLIQYELMPSFGGEKGDSYLRTETVSVVQMQEDDTGVKVDPIQWWDVCRRADWPEREECIHGITLGGREATDIVMGDSLSEDDDKREKDLAKLCDRSHWYLSNAEVQLKSGRIPIWQKSKIYFCTMSLSGYEEQDISRSSAAGEIEIEKIHVNEVEVRRKDLLPVFDHFHRIPSKWSDD---------SSSIGKE--KSVDGTTGI--SRADSLSEKSFPSGSSQVPRLHEVGMGPISYPCIELSMEESDGSRSSSYTAAPQVSKNMPAGL--ESSPNILCSVEESYVVN------SPSPPKIESFSTGGTSAREVQSSNSVITSEASNSSSNRSDLSMNIIDEQTVNEDICDPVDFGQFFQEGYCKASTNNELHEVTELVADMDSSSSPCNKEKPDDDGESDDMLGGVFDFFEEG 983
[Close]
BLAST of XM_017374902.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834GS44 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7138777.1}))

HSP 1 Score: 1088.56 bits (2814), Expect = 0.000e+0
Identity = 614/1020 (60.20%), Postives = 741/1020 (72.65%), Query Frame = 0
 
Query:    1 MRRNQ--NNYINNSNKTNTTATNGFLP---KLISSCIKTVSSAVR-------ASVAAD-DHFHKDQVLWAGFDRLELGASVVKSLLLLGYSNGFQVLDVEDASNVTELVSRRDDAVTFLQMQPIPAKCDDREGFMDSLPLLLVVASEETSCSGPMQNGRDSSVRDK-YEPRVGTVIHTPTAVRFYSLRSHSYVHVLRFRSAVYMVRCSSKIVAVGLAAQIYCFDALTLESKFSVLTYHVPRLGGQALSGVNIGYGPMAVGPRWLAYASNNPLLPNTGRLSPQSLSPSPGVSPSTSPSNGNLMARYAMESSKQLATGIINLGDMGIKTFSKYCHELLPDGSSSPVSSIASGKVGRTTAHLSDVDTAGTVVIKDFVSRAVVSQFRAHTCPIAALCFDPSGTLLVTASVKGNNINIFRIVPTYLQNGSGSHSYDWSSSHVHLYKLHRGITSAVIQDICFSPSSHWIAIVSSNHTGHIFVLSPFGGETGLQMQNSNLNGPTLLPLRSVPWWSTSSYML-KQSYSPPPPPLITLSVVSRIK--NSTWLSTVRNAASSAAGKLPPPPGVVSAIFHSSVGNLQPTNLT-VNALEHLMVYTPSGNVVQYELLHSVGGDQGESFLRNGTSSLEQVQDEELKVKASPVQWWDVCRRADWPEREEFIQGNVLGRQDSAETVICPYEYEDDGTKEKDTVKHHDQYHWYLSKAEVQIRSGRTPVWQKSKVYSYAMSSVSVEGGRPNLYSSGGEIEIEKLHAREIEIRRKDLLPVSDHFHQLHHKWANNRGINVRYSPSSSLSDEGNKYSDDEQALI-------PSSVDNLITGIRSSATDLSKQEYHATMNSYPPFRPI---DNENKGVKGSN--FLPTQ----NSIGRAATSLSPEPSPSMISAFEECY-VNNYSSISSKPSPSGGNISEEVLSSSSVVTGDVSNTSSKCTDSTMNLPEELGHEDIH-------YFQEGYFESTSLDKFNQFNKHTTEVDRS-TSHCNKADFEEDADSDDILGGVFAFSKEG 977
            MR+ Q  NN+ +  N  N   +NGF+P   +L+SSCIKTVSS VR       AS++AD D   KDQVLWA FD++ELGASV K +LLLGYSNGFQVLDVEDASN  ELVSRRDDAVTFLQMQPIPAK   REGF  S PLLLVVAS+E   SGPMQNGRD  VRD   +P++G ++++PTAVRFYSLRSH+YVHVLRFRSAVYMVRCS +IVAVGL AQIYCFDALTLESKF+VLTY VP+L    L GVNIGYGPMAVG RWLAYASNNPL  +TGRLSPQSLSPSPGVSPSTSP NG+L+ARYAMESSKQLA G++NLGD G KTF+KY HEL+PDGSS P SS +  KVG+     ++ DTAGTVVI+DFVS+AVVSQFRAHT PI+AL FDPSGTLLVTASV GNNINIFRI+ +  QNGSG+ + DWSSSH HLYKLHRG+TSAVIQDI FS  S W+AIVSS  T HIFVLSPFGGETGLQ+QNS+ +GP L+P+ S PWWSTSS ++ +QS+S PPPP ITLSVVSRI+  NS WL+TV NAASSAAGK+  PPG V+AIFHSSV   +   L+ VNALEHL+VY+PSGNV+QYELL SVGG+Q ES    GT SL Q+Q+EEL VK  PVQWWDVCRR DW EREE I GN  G ++SA  ++   +YED+ T EKD  K H+  H YLS AEVQIRSGR P+WQKSK+  + MS +  E          GEIEIEK+   E+EI+RKDLLPV D FH++H  W+++R +      +SS +  G+K    E+A+I       P S++N   G  SS T  + ++ H  M+S+ P+  I   +N+N GV G N  FL +      S  +        PS + +S   E Y VN  SS  S    +GG+   EV SSSSV+T ++SNTSS  +D +MN+ +E  HED+H       YF+EGY +++S D+  +  +  T+V+ S  S C+K   EED D+DD+LGGVFAFS+E 
Sbjct:    1 MRKTQASNNHKSKHNPNNNNNSNGFIPNSLRLLSSCIKTVSSNVRSAGASVAASISADADDLRKDQVLWASFDKVELGASV-KRILLLGYSNGFQVLDVEDASNFIELVSRRDDAVTFLQMQPIPAKSAGREGFRTSHPLLLVVASDEPRSSGPMQNGRDVFVRDGCVDPQMGNLLNSPTAVRFYSLRSHNYVHVLRFRSAVYMVRCSPRIVAVGLVAQIYCFDALTLESKFNVLTYPVPQLVSPGLVGVNIGYGPMAVGTRWLAYASNNPLSSSTGRLSPQSLSPSPGVSPSTSPGNGSLVARYAMESSKQLAAGLVNLGDKGYKTFTKYYHELMPDGSSPPASSNSGWKVGKAPTTSTENDTAGTVVIRDFVSKAVVSQFRAHTSPISALSFDPSGTLLVTASVHGNNINIFRIMLS--QNGSGARTSDWSSSHAHLYKLHRGLTSAVIQDISFSQYSQWVAIVSSRGTCHIFVLSPFGGETGLQIQNSHGDGPRLIPVLSHPWWSTSSLVMSQQSFSSPPPP-ITLSVVSRIRLGNSGWLNTVSNAASSAAGKVSVPPGGVAAIFHSSVHPHKQLALSKVNALEHLLVYSPSGNVIQYELLPSVGGEQSESASGAGTDSLVQMQEEELHVKFEPVQWWDVCRRVDWLEREECIDGNNPGDRESA-MLMDASDYEDNDTGEKDLGKQHEHSHVYLSNAEVQIRSGRIPIWQKSKICFFRMSLLGDEENNLAEDQIDGEIEIEKIAVHEVEIKRKDLLPVFDRFHRVHSDWSDDRSMVGGKCSASSSTSHGSKEKFSEEAIITHTKLVSPGSLENPDVG--SSRTPAAVRDLH-QMDSFRPYPRIVQSENDNDGVIGRNNAFLWSHATNPGSFNQVDARTLRGPSATGVSFIRESYVVNTPSSPKSSALSTGGSAPREVQSSSSVLTSEISNTSSDRSDLSMNIIDEPVHEDMHDPIDFGRYFEEGYCKASSHDESPELTEAITDVESSNNSPCDKQKSEEDGDNDDMLGGVFAFSEEA 1012
Match NameStatsDescription
A0A5B7BTC7E-Value: 0.000e+0, PID: 61.98(Putative autophagy-related protein 18h {ECO:00003... [more]
A0A5J5B0Y5E-Value: 0.000e+0, PID: 60.39BCAS3 domain-containing protein {ECO:0000259|Pfam:... [more]
A0A1J6ITC9E-Value: 0.000e+0, PID: 59.31(Autophagy-related protein 18h {ECO:0000313|EMBL:O... [more]
A0A2G3BUA1E-Value: 0.000e+0, PID: 58.59(Autophagy-related protein 18h {ECO:0000313|EMBL:P... [more]
A0A2G2W7L5E-Value: 0.000e+0, PID: 58.49(Autophagy-related protein 18h {ECO:0000313|EMBL:P... [more]
A0A2G2YZ81E-Value: 0.000e+0, PID: 59.03(Autophagy-related protein 18h {ECO:0000313|EMBL:P... [more]
A0A1U8DU46E-Value: 0.000e+0, PID: 59.03(autophagy-related protein 18h {ECO:0000313|RefSeq... [more]
A0A7J0FW57E-Value: 0.000e+0, PID: 60.60(Autophagy 18h-like protein {ECO:0000313|EMBL:GFZ0... [more]
A0A0V0IXM6E-Value: 0.000e+0, PID: 58.95(Putative autophagy-related protein 18h-like {ECO:... [more]
A0A834GS44E-Value: 0.000e+0, PID: 60.20(Uncharacterized protein {ECO:0000313|EMBL:KAF7138... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.