XM_017373596.1

Resource Type: 
Polypeptide
Name: 
XM_017373596.1
Identifier: 
XM_017373596.1-protein
Sequence: 
MVHASQILHMIVFIFFMLTPLMNAAMLFNGDLHVLRVSGEEENKGLVFEK
ISALLGLGRFYRRKQQSSPVEAPALAPAPAPIYHHAHSHHRHSHRARITA
PRRRRINKERSDQGIVTRNIVVLFIVSASLVFVLLGIVFIWGCKKFRKTR
KETSKMAILHSSDIENYRRSKGVGIIEKVNKEMARSEAQNVGCPAVGDIG
TGNSVEKSSVGCGSQTSDEKTLRDACLADDESFQSPDDIHSANARFSNAS
AEPLSDTSETVLQFKPSSPMASSLLSSLQPPPPPPPPPPPLNRIHMFPST
SRPGPTTLTSAALSSAFSNLMLTSKGDQFSESSQKSENNLKDPSKIPQRF
PPTFTQGPPPPPSPLEKYSSLDKDGNQLPKLKPLHWDKVRTAPDHSMVWD
KIRSSSFEFDEEMIESLFGYDIKYSSRYDEAKSPSPKKHILEPKRLQNIT
ILSKALNVSADHICEALRQGAGLGLQQLEALIKMELTKEEEGMLTSYQGD
IDGLGSAEKILKTILHIPFAFPRIEAMIYRETFEDEIALLRNSFSMLEDG
CKELRSSRLFLKLLEAVLKTGNRMNIGTVRGGARAFKLDALLKLADVKGA
DGKTTLLHFVVKEIIRTEGIKASDSIIGKINQKNRSQTFEDREEAYREMG
LDLVSGLTSELFNVRKTANIDFDAIASSLSNLFHGLAQLQHLVQTDLSKE
EMNGSFVLSMRTFISYAEKKLKEMKEDKVRVLVLVREMTEYFHGNVSTDE
SNPLRIFVVVRDFLGMLDHVCKEIRNSKAPPASNRLAPFQ
Sequence Length: 
790
Sequence Checksum: 
7182459af9e0cae6667be8200020d42b
View location in JBrowse: 
DCARv2_Chr1:22578876..22581566-
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017373596.1, derives from mRNA, XM_017373596.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017373596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017373596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A540N261 (Formin-like protein {ECO:0000256|RuleBase:RU361260})

HSP 1 Score: 687.567 bits (1773), Expect = 0.000e+0
Identity = 416/887 (46.90%), Postives = 537/887 (60.54%), Query Frame = 0
 
Query:   31 DLHVLRVSGE-EENKGLVFEKISALLGLGRFYRRKQQSSPVEAPALAPAPAPIYHHAHSHHRHSHRARITAP----------RRRRINK----ERSDQGIVTRNIV-VLFIVSASLVFVLLGIVFIWGCKKFRKTRKE-TSKMAIL--------------------HSSDI------------------------ENYRRSKGVGIIEK--VNKEMARSEAQN-VGCPAVGDIGT------GNSVEKSSVGCGSQTSDEKTLRDACLADDESFQSPDDIHSANARFSNASAEPLSDTSETVLQFKPSSPMASSLLSSLQPPPPP-PPPPPPLNR--------------------------------IHMFPS-TSRPGPTTLTSAAL--SSAFSNLMLTSKGDQFSESSQKSENNLKDPSKIPQRFPPT-------------------FTQGPPPPPSPLEKYSSLDKDGNQLPKLKPLHWDKVRTAPDHSMVWDKIRSSSFEFDEEMIESLFGYDIKYSSRYDEAKS--PSPKKHILEPKRLQNITILSKALNVSADHICEALRQGAGLGLQQLEALIKMELTKEEEGMLTSYQGDIDGLGSAEKILKTILHIPFAFPRIEAMIYRETFEDEIALLRNSFSMLEDGCKELRSSRLFLKLLEAVLKTGNRMNIGTVRGGARAFKLDALLKLADVKGADGKTTLLHFVVKEIIRTEGIKASDSIIGKINQKNRSQTFEDREEAYREMGLDLVSGLTSELFNVRKTANIDFDAIASSLSNLFHGLAQLQHLVQTDLSKEEMNGSFVLSMRTFISYAEKKLKEMKEDKVRVLVLVREMTEYFHGNVSTDESNPLRIFVVVRDFLGMLDHVCKEIRNSKAPPASNRLAPFQ 790
            +L + RVSGE EEN   VFEK  ALLGL  F++R   S+              Y  A +       A   AP          R R  +K     R D+G + R +V VL    A++V  +LGIV  WGC+K RK +K+ TS +++                      +SD+                        E    S+   ++E+   N+++ +SE  +     + G+I +        +V+ +S    S T D+    D+  +DDESF S D+ +S+N R SNASA  L D+S+ +      S   S++   L+ P    P  P  + R                                I  FP   S P  T + S A   SS   NL    K      S+Q  E       +   R   T                   F +GPPPP  P  + + L KDG  LPKLKPLHWDKVR APDHSMVWDK+RSSSFE DEEMIESLFGY+++ S + DEAKS  PSP KH+LEPKRLQN+TILSKALN +AD +CEAL QG GL LQQLEAL++MELTKEEEG LT Y+GDI+ LGSAEK +K +L +PFAF R+EAM+YRETFEDE+  LRNSFS+LE+ CKELRSSRLFLKLLEAVLKTGNRMN+GT+RGGA+AFKLD LLKL+DVKG DGKTTLLHFVV+EIIRTEGI+ SDSI+GKI+QKN+++T E++EE YR MGLDLVSGL++EL+N +KTA +D D +ASS+SNL  G+ +++HL+  +L  +  +G+ V SM++FI YAE++L+E++ D+ RVL  V+E+TEYFHGNVS +E+NPLRIFV+VRDFLGMLDHVCKE+R+SKAP   N LAPF+
Sbjct:   52 NLQIHRVSGEDEENAVPVFEKFRALLGLNSFHKR-TPSAADSGNVSPSPSPSPYSEAEAPSPAPAPAPSPAPHIHAHSHHPHRLRSTSKPQDIHREDRGGMARILVPVLVFAGAAVVICVLGIV--WGCRKQRKHKKKPTSVISVFGQNGGAKSPSKVKLNAATTTTTSDLIYPDSLGLDLEQQQHHISCSKETFETVITSRNHTLLEREETNQQVMKSEFDDACSSSSTGEIMSVHEDIIAEAVKYASDCANSATGDKIIPVDSYSSDDESFHSFDNSNSSNIRLSNASAGSLGDSSDVL------STNVSNIEPCLEAPSINLPDQPETITRNKESKLLIAPCSSNCEKNVNAPPAPPPPPPPPIKHFPHFYSSPRSTRIASKASCSSSTLQNLSPPRKSGSSCGSNQTPEGGFSVSPQNSSRHSETPPPIPPPPCPPPFSKANNSFLKGPPPPSLP--QATPLGKDGTPLPKLKPLHWDKVRAAPDHSMVWDKLRSSSFELDEEMIESLFGYNLQGSMKNDEAKSKSPSPSKHVLEPKRLQNVTILSKALNSTADQVCEALVQGNGLRLQQLEALVRMELTKEEEGKLTGYKGDINELGSAEKFVKAVLRVPFAFQRVEAMLYRETFEDEVVHLRNSFSVLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGAKAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRTEGIRVSDSIMGKISQKNKTKTLEEKEEDYRRMGLDLVSGLSTELYNAKKTATLDLDVLASSVSNLSDGMEKIKHLIHKELCMDANSGNLVNSMKSFICYAEERLRELQGDESRVLSQVKEITEYFHGNVSKEEANPLRIFVIVRDFLGMLDHVCKELRSSKAPRTPNPLAPFK 927
[Close]
BLAST of XM_017373596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RAK4 (Formin-like protein {ECO:0000256|RuleBase:RU361260})

HSP 1 Score: 684.485 bits (1765), Expect = 0.000e+0
Identity = 416/869 (47.87%), Postives = 537/869 (61.80%), Query Frame = 0
 
Query:   24 AAMLFNGD---LHVLRVSGEEENKG---LVFEKISALLGLGRFYRRKQQSSPVEAPAL---------APAPAPIYHHAHSHHRHSHRARITAPRRRRINKERSDQGIVTRNIVVLFIVSASLVFVLLGIVFIWGCKKFRKTRKETSKMAILHSSDIEN--------------YRRSKGVGIIEK--VNK----------------EMARSEAQNVGCPAVGDIGTGNSVEKSSVGCGSQTSDEKTLRDACLADDESFQSPDDIHSANARFSNASAEPLSDTSETVLQFKPSSPMASSLLSSLQPP---------PPPPPPPPPLNRIHMFPSTSRPGPTTLTSAALSSA------------FSNLMLTSKGDQFSE----SSQKSENNLKDPSKIPQR---------------------FPPTFTQG-------PPPPPSPLEKYSSLDKDGNQLPKLKPLHWDKVRTAPDHSMVWDKIRSSSFEFDEEMIESLFGYDIKYSSRYDEAKS--PSPKKHILEPKRLQNITILSKALNVSADHICEALRQGAGLGLQQLEALIKMELTKEEEGMLTSYQGDIDGLGSAEKILKTILHIPFAFPRIEAMIYRETFEDEIALLRNSFSMLEDGCKELRSSRLFLKLLEAVLKTGNRMNIGTVRGGARAFKLDALLKLADVKGADGKTTLLHFVVKEIIRTEGIKASDSIIGKINQKNRSQTFEDREEAYREMGLDLVSGLTSELFNVRKTANIDFDAIASSLSNLFHGLAQLQHLVQTDLSKEEMNGSFVLSMRTFISYAEKKLKEMKEDKVRVLVLVREMTEYFHGNVSTDESNPLRIFVVVRDFLGMLDHVCKEIRNSKAPPASNRLAPFQ 790
            AA  FNGD     + +VSGE+E +G   L+ EK  ALLGL  F  +  Q    +  +          APAP P+      H  H    R   P+  + + E  D G   R +++   VS    FV+ G+   + C KFR+ R+ +    +  S   +N              Y  S G  + +   VNK                E  RSE+ NV   + G+I + +     SV   S   ++    +A  ++DESF S  D HS N R SNASA  +S+ SE  L  K S+   S + S +  P         PP PPPP   +++H+ PS SR   T +TS AL S+             S+  +TS+    S     S  ++ ++    ++ PQR                      PP FT         PPPPP    + + + K+G  LPKLKPLHWDKVR AP+ S VWDK+RSSSFEFDEEMIESLFGY+++   + DEAKS  PSP KH+L+PKRLQNITILSKALNV+AD +C+AL QG GL LQQLE L+ M LTKEEE   +SY+G+++ LGSAE+ +K IL +PFAF RIEA++YRETFEDE+  LR SFSMLE+ CKELRSSRLFLKLLEAVLKTGNRMN+GT+RGGA+AFKLDALLKLADVKG DGKTTLLHFVV+EI+R+EGI+ S+SI+GKINQ+++ +  E+REE YR MGLDLVSGL+ EL N +KTA ID D +ASS+SNL  G+++L+HLV  DLS +E +G+FV SMRTF+ + EK + E++ED+ RVL  VRE+TEYFHG+VS DE+NPLRIFV+VRDFLGMLDHVCKE+R SK P + N LAPF+
Sbjct:   32 AAEFFNGDGRERDIEKVSGEDEREGEKALILEKFRALLGLKSFKIKNPQIGGFDYGSPSPSPSPTIEAPAPVPV-QPISVHRHHPFHHRHPIPQPHKTHSEDRDGGRRARRVLIAVSVSVGATFVICGVGLFFFCIKFRRHRRRSKGPVVSKSLSSQNSVKQVSSNPGLDLFYLDSLGAALEDSKTVNKLLNQNTSSREREGSEQEAVRSESGNVCSSSAGEIVSVHDDSGESVSYDSDQCNKTDCVEAISSNDESFHSLCDSHSLNVRLSNASAASVSNKSE-FLSPKGSNKSPSCVKSPMDLPYKGLAPPPPPPLPPPPLCSSQLHILPSHSRSSSTQITSRALGSSTLPILSSPRNSDCSSTRITSRASGSSTLPILSPPRNSDSSSGSNQTPQRDMLPSPPNPPPRALVGIPPPPCPPPFTNANTYSLKTPPPPPYQFMQLTPMGKNGAPLPKLKPLHWDKVRAAPNRSTVWDKMRSSSFEFDEEMIESLFGYNLQTPMKSDEAKSKSPSPSKHVLDPKRLQNITILSKALNVTADQVCDALLQGEGLCLQQLETLVNMVLTKEEEAKFSSYKGEVNELGSAERFVKAILKVPFAFLRIEALLYRETFEDEVVHLRKSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGAKAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSESIMGKINQRSKIRNPEEREEGYRRMGLDLVSGLSVELCNAKKTATIDLDVLASSVSNLSDGMSKLKHLVGKDLSVDEKSGNFVQSMRTFLGHTEKSINELREDEGRVLRHVREITEYFHGDVSKDEANPLRIFVIVRDFLGMLDHVCKELRCSKVPSSPNPLAPFR 898
[Close]
BLAST of XM_017373596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1A832 (Formin-like protein {ECO:0000256|RuleBase:RU361260})

HSP 1 Score: 679.863 bits (1753), Expect = 0.000e+0
Identity = 429/929 (46.18%), Postives = 560/929 (60.28%), Query Frame = 0
 
Query:    1 MVHASQILHMIVFIFFMLTPLMNAAMLFNGD----------LHVL-----------------RVSGEEENK---GLVFEKISALLGL----GRF----------YRRKQQSSPVEAPALAPAPAP-IYHHAHSHHRHSHRARITAPRRRRINKERSDQGIVTRNIVVLFIVSASLVFVLLGIVFIWGCKKFRKTRKETSKMAILHS-----------SDIEN--------------YRRSKGVGI---------------------IEKVNKEMARSEAQNVGCPAVGDIGTGN----SVEKSSVGCGSQTSDEKTLRDAC-LADDESFQSPDDIHSANARFSNASAEPLSDTSETVLQFK--PSSPMASSLLSSLQPPPPPPPPPPPLNRIHMFPSTSR-----------PGPTTL--TSAALSSAFSNLMLTSKGDQFSESSQKSENNLKDPSKIP------------------QRFPPTFTQGPPPP-------PSPLEKYSSLDKDGNQLPKLKPLHWDKVRTAPDHSMVWDKIRSSSFEFDEEMIESLFGYDIKYSSRYDEAKS--PSPKKHILEPKRLQNITILSKALNVSADHICEALRQGAGLGLQQLEALIKMELTKEEEGMLTSYQGDIDGLGSAEKILKTILHIPFAFPRIEAMIYRETFEDEIALLRNSFSMLEDGCKELRSSRLFLKLLEAVLKTGNRMNIGTVRGGARAFKLDALLKLADVKGADGKTTLLHFVVKEIIRTEGIKASDSIIGKINQKNRSQTFEDREEAYREMGLDLVSGLTSELFNVRKTANIDFDAIASSLSNLFHGLAQLQHLVQTDLSKEEMNGSFVLSMRTFISYAEKKLKEMKEDKVRVLVLVREMTEYFHGNVST-DESNPLRIFVVVRDFLGMLDHVCKEIRNSKAPPASNRLAPFQ 790
            M ++SQIL+MI  IF +++  ++++ + + D          +H L                 +VSG++EN+    L+ +K  ALLGL    GR                  + +EA    PAPAP +  H H H      +  T P  +RI+KE +D+G V R I+V  +VSA   F+   +  I  C K RK RK+++K  + +            +  +N              Y  + GVG+                      E+ NKE+A  E+ N    +  +I + +    S    S G G  +  +K +   C  +DDESF S  D  S+N R SNASA  LSDTSE  L      +SP  S +  S+ P        P   +    P               P  ++L  T A L ++ S+ +L     + S+SS  S  N  +PS IP                     PP F +G   P       P+ L +Y+ + KDG  LPKLKPLHWDKVR APD SMVWDK+RSSSFE DEEM+ESLFGY+I  S + DE KS  PSP +H+LEPKRLQNITIL KALNV+ +  C AL +G GL LQQLEAL+KM  TKEEE  L+SY+GDI+ LGSAEK +K +L IPFAF R EAM+YRETFEDE+  L+NSFSMLE+ CK+LRSSRLFLKLLEAVLKTGNRMN+GT+RGGA AFKLDALLKLADVKG DGKTTLLHFVV+EIIR+EGI+ SDSI+GKINQ+N+S+T E++EE YR MGLDLVSGL++EL++V+KTA +D D +ASS+SNL  G ++LQ LVQ +LS +E +G+FV SM +F++YAEK LKE++ED+ RVL+ V E+TEYFHG+VS  DE+NPLRIFV+VRDFLGMLDHVCKE+R+ K P + + LAPF+
Sbjct:    1 MGYSSQILYMIFIIFLLIS--LDSSHILSADAFLDAAGGFTVHGLQQFYFMEESGGNQNKIEKVSGQDENEQKEALIVQKFRALLGLKSTKGRIPLNGAAECFSPSPSPSPNSIEAETSVPAPAPALPMHTHFHSPPPRSS--TMPLPKRIHKENADKGRV-RRILVPVLVSAGAAFLACLVGLICFCGKIRKHRKKSTKPILTYCRKGRIRGKSQYTSSQNSTSNVSLNPSLDLFYLNTLGVGLEQQPACLKQSAETEKTSTIDKREESNKEVAILESDNASSSSTREITSVHEDVESARYDSDG-GHCSPPDKVIPIECHSSDDESFHSFADSRSSNVRLSNASAGSLSDTSEIPLNVTKVSTSPQHSFVSPSMSPAMSGRVDSPDCQKNFTPPPPPPPPPLPPVVLISPLNSSLSATKARLKASSSSTLLDITPARNSDSSSGSNRNQANPSDIPLSPQKPSKSLPSPPGIPPPPCPPPFLKGNNNPVKGPPPPPTHLPQYTPMGKDGAPLPKLKPLHWDKVRAAPDRSMVWDKLRSSSFELDEEMMESLFGYNIHNSMKNDETKSKTPSPSQHVLEPKRLQNITILLKALNVTVEQACNALMKGNGLVLQQLEALVKMAPTKEEETKLSSYKGDINELGSAEKFVKVVLSIPFAFLRAEAMLYRETFEDEVIHLKNSFSMLEEACKDLRSSRLFLKLLEAVLKTGNRMNVGTIRGGAIAFKLDALLKLADVKGTDGKTTLLHFVVQEIIRSEGIRVSDSIMGKINQRNKSRTAEEKEEDYRRMGLDLVSGLSTELYHVKKTATLDLDVLASSVSNLSGGKSKLQQLVQEELSTDEKSGNFVRSMNSFLNYAEKNLKELQEDEHRVLLQVTEITEYFHGDVSKLDEANPLRIFVIVRDFLGMLDHVCKELRSLKVPSSPSPLAPFR 923
[Close]
BLAST of XM_017373596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N6QSU7 (Formin-like protein {ECO:0000256|RuleBase:RU361260})

HSP 1 Score: 677.937 bits (1748), Expect = 0.000e+0
Identity = 417/854 (48.83%), Postives = 535/854 (62.65%), Query Frame = 0
 
Query:   21 LMNAAMLFN--GD---LHVLRVSGEEENK---GLVFEKISALLGLGRFY------RRKQQSSP-------VEAPALAPAPAPIYH-HAHSHHRHSHRARITAPRRRRINKERSDQGIVTRNIVVLFIVSASLVFVLLG-------------------IVFIWGCK-------KFRKTRKETSKMA--------ILHSSDIENYRRSKGVGIIEKVN-------------------KEMARSEAQNVGCPAVGDIGTGNSVEKSSV---GCGSQTSDEKTLRDAC-LADDESFQS-PDDIHSANARFSNASAEPLSDTSETVLQFKPSSPMASSLLSSLQPPPPPPPPPPPLNRIHMFP-STSRPGPTTLTSAALSSAFSNLMLTSKGDQFSESSQKSENNLKDPSKIPQRFPPTFTQGPPPPPSPLEKYSSLDKDGNQLPKLKPLHWDKVRTAPDHSMVWDKIRSSSFEFDEEMIESLFGYDIKYSSR-YDEAKS--PSPKKHILEPKRLQNITILSKALNVSADHICEALRQGAGLGLQQLEALIKMELTKEEEGMLTSYQGDIDGLGSAEKILKTILHIPFAFPRIEAMIYRETFEDEIALLRNSFSMLEDGCKELRSSRLFLKLLEAVLKTGNRMNIGTVRGGARAFKLDALLKLADVKGADGKTTLLHFVVKEIIRTEGIKASDSIIGKINQKNRSQTFEDREEAYREMGLDLVSGLTSELFNVRKTANIDFDAIASSLSNLFHGLAQLQHLVQTDLSKEEMNGSFVLSMRTFISYAEKKLKEMKEDKVRVLVLVREMTEYFHGNVSTDESNPLRIFVVVRDFLGMLDHVCKEIRNSKAPPASNRLAPFQ 790
            ++NAA  FN  GD    ++ +VSGE+E++    L+ EK  ALLGL  F+      R  +  +P       +EA A AP+P+P+   HA+ HH  SHR     P+  +  KE   +  V R I+V  I+SA  VF++                     I+ ++G K       K   T+   SK++         L+S   +  +++    I E VN                   +E  + ++ N    +  +I + +   +S +     G+ +S  K +   C  +DDESF S  + +   NAR SNASA  L + S+ +     S+P+ S + SSL         P  L+ I M P S+  P P                            Q  E     PS++P RF P                  + KDG  L KLKPLHWDKVR APD SMVWDK+RSSSFE DEEMIESLFGY+++ S +  DEAKS  PSP KH+LEPKRLQNITILSKALNV+A+ +CEAL QG GL LQQLEAL+KM  TKEEEG L+ Y+GDI+ LGSAEK +K IL IPFAF R+EAM+YRETFEDE+  LRNSFSMLE+ CKELRSSRLFLKLLEAVLKTGNRMN+GT+RGGARAFKLDALLKLADVKG DGKTTLLHFVV+EIIR+EGI+ SDSI+G+I++K++S T E+REE YR MGLDLVSGL++EL+NV+KTA ID D + SS+SNL  G+A+L+HLV  +L  +E NG+FV SMR+FISYAE+KLKE++ D+ R+L  V+E+TEYFHG+VS DE+NPLRIFV+VRDFLGMLDHVCKE+R+SKAP   N LAPF+
Sbjct:   25 VLNAAEDFNVHGDRIGYYIQKVSGEDESQEKGALIVEKFRALLGLKSFHVSNPSHRSHENMAPSPAPYPAIEAEAEAPSPSPVLRIHANPHHP-SHRPSSNIPQHDKAQKENRGKDRV-RTILVAVILSAGAVFLVCALGFIWLCKKRRKQREKRTRIISVYGKKGGTRGKLKNVSTQNSASKVSRNPGLDLFYLNSLGKDLEQQTCLKQITEPVNTSSYDSTPKCTMHEMEDPIQEHVKIDSDNASSSSTREITSVHEDAESLIYESDAGNSSSRGKIIPIECHSSDDESFHSFGESLSWRNARLSNASAGSLGEKSDIL-----STPLESQIKSSL---------PKSLD-IEMPPQSSCYPKP--------------------------EKQTVECPPPPPSQLP-RFTP------------------MGKDGTPLAKLKPLHWDKVRAAPDRSMVWDKMRSSSFELDEEMIESLFGYNLQTSMKSADEAKSKTPSPSKHVLEPKRLQNITILSKALNVTAEQVCEALLQGNGLSLQQLEALVKMVPTKEEEGKLSGYKGDINELGSAEKFVKVILRIPFAFVRVEAMLYRETFEDEVVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIIRSEGIRVSDSIMGRISKKSKSNTVEEREEDYRRMGLDLVSGLSTELYNVKKTAAIDLDVLGSSVSNLSDGMAKLKHLVHRELWVDERNGNFVNSMRSFISYAEEKLKELQGDEDRILTHVKEITEYFHGDVSKDEANPLRIFVIVRDFLGMLDHVCKELRSSKAPRTPNPLAPFR 816
[Close]
BLAST of XM_017373596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5C7I7G8 (Formin-like protein {ECO:0000256|RuleBase:RU361260})

HSP 1 Score: 677.552 bits (1747), Expect = 0.000e+0
Identity = 429/868 (49.42%), Postives = 536/868 (61.75%), Query Frame = 0
 
Query:   33 HVLRVSGEEEN---KGLVFEKISALLGLGRFYRRKQQSSPVE-----------APALAPAPAPIYH-HAHSHHRHSHRARITAPRRRRINKERSDQGIVTRNIVVLFIVSASLVFVLLGIVFIWGCKKFRKT-----------------RKETSKMAILHSS----------------------DIENYRRSKGV-------------------GIIEKVNKEMARSEAQN-VGCPAVGDIGT-------GNSVEKSSVGCGSQTSDEKTLRDAC-LADDESFQSPDDIHSANARFSNASAEPLSDTSE----TVLQFKPSSPMASSLLS---SLQPPPPPPPPPPPLNRIHMFPSTSRPGPTTLTSAAL--SSAFSNLMLTSKGDQFSESSQKSENNLKDPSKIPQRFPPTFT---------------QGPPPPPSPLEKYSSLDKDGNQLPKLKPLHWDKVRTAPDHSMVWDKIRSSSFEFDEEMIESLFGYDIKYSSRYDEAKS--PSPKKHILEPKRLQNITILSKALNVSADHICEALRQGAGLGLQQLEALIKMELTKEEEGMLTSYQGDIDGLGSAEKILKTILHIPFAFPRIEAMIYRETFEDEIALLRNSFSMLEDGCKELRSSRLFLKLLEAVLKTGNRMNIGTVRGGARAFKLDALLKLADVKGADGKTTLLHFVVKEIIRTEGIKASDSIIGKINQKNRSQTFEDREEAYREMGLDLVSGLTSELFNVRKTANIDFDAIASSLSNLFHGLAQLQHLVQTDLSKEEMNGSFVLSMRTFISYAEKKLKEMKEDKVRVLVLVREMTEYFHGN--VSTDESNPLRIFVVVRDFLGMLDHVCKEIRNSKAPPASNRLAPFQ 790
             V +VSGE+EN   + L+ +K  AL GL     ++  +   +                PAPAP+ H   HSH     R+    P  + I KE +D     R I+V  +VSA   F++  +   W C K+RK                  RK  +K   L S                       D+E  + S G+                       +V +E+ +SE+ N    P+  +I +        +S +    G    +S +K +   C  +DDESF S +D  S+N R SNASA  LSDT E     V +   SS   S+ LS      PPPPPPPPP         PS S    T L S A   SS   NL      D  S S+Q  +++L   S+ PQ  P                   +GPPPPPS L  Y+ L KDG  LPKLKPLHWDKVR APD  MVWDK+RSSSFEFDEEMIESLFGY+I+ S + DEAKS  PSP KH+L+PKRLQNITILSKALNV+A+ +C AL +G GL LQQLEAL+KM  TKEEE  L+SY+GDI+ LGSAEK +K IL IPFAF R+E M++RETFEDE+  LRNSFSMLE+ CKELRSSRLFLKLLEAVLKTGNRMN+GT+RGGARAFKLDALLKLADVKG DGKTTLLHFVV+EIIR+EGI+ +DSI+GKINQ+N+++T E+REE YR MGLDLVSGL++EL+NV+KTA ID D +ASS+SNL  G+ +L+HL++ DL  +E +G FV SM  F+SYAEKKL E++ED+ RVL+  RE+TEYFHG+  V+ DE+N LRIFV+VRDFLGMLDHVCKE+RNSK P + N L+PF+
Sbjct:   63 QVHKVSGEDENDQKEALIVQKFRALFGLSSLKTKRPSNGDSDFVSSSPSPSPTIQTEVPAPAPLLHIPIHSHPHQPPRSNPIPPHHK-IQKEIADNKGRARRILVPVLVSAGAAFLVCVLGLTWFCCKYRKQYKKSAGGAMSVAFRKRGRKRGNKSKYLSSQKPASKVNINPPLDLFYLNSLGMDLEQQQTSSGLKQTNETVNTSLSSPNHSTPNCALQVKEELIKSESDNACSSPSTREITSVHEDDDDADSTKYEFDGVLKSSSGDKIVSIECHSSDDESFHSFNDSRSSNVRLSNASAGSLSDTPEVFSPNVAKKSTSSLPCSTNLSVPPPPSPPPPPPPPPLLPPSARFTPSKSSSCSTKLASKASCSSSTLPNLSPPRISDSSSGSNQTPQSDLS--SQPPQASPGIPPPPCPPPFANKNNNSLKGPPPPPSLLPLYTQLGKDGAPLPKLKPLHWDKVRAAPDRCMVWDKMRSSSFEFDEEMIESLFGYNIQSSMKNDEAKSKTPSPSKHVLDPKRLQNITILSKALNVTAEQVCLALTKGEGLSLQQLEALVKMVPTKEEEAKLSSYRGDINELGSAEKFVKAILCIPFAFTRVEFMLFRETFEDELFHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIIRSEGIRVADSIMGKINQRNKTKTIEEREEDYRRMGLDLVSGLSTELYNVKKTATIDLDVLASSVSNLSEGMIKLRHLIEKDLCVDERSGMFVNSMNVFLSYAEKKLMEVQEDERRVLLHAREITEYFHGDHHVTKDEANLLRIFVIVRDFLGMLDHVCKELRNSKVPSSPNPLSPFR 927
[Close]
BLAST of XM_017373596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N5HXK0 (Formin-like protein {ECO:0000256|RuleBase:RU361260})

HSP 1 Score: 674.085 bits (1738), Expect = 0.000e+0
Identity = 422/934 (45.18%), Postives = 550/934 (58.89%), Query Frame = 0
 
Query:    5 SQILH-MIVFIFFMLTPLMNAA------------MLFNGD-------LHVLRVSGEEENKGL-VFEKISALLGLGRFYRR----------------KQQSSPVEAPALAPAPAPIYHHAHSHHRHSHRARITAPRRRRINKERSDQGIVTRNIV-VLFIVSASLVFVLLGIVFIWGCKKFRKTRKETSKM--------------------AILHSSDI------------------------ENYRRSKGVGIIEK--VNKEMARSEAQNVGCPA--------VGDIGTGNSVEKSSVGCGSQTSDEKTLRDACLADDESFQSPDDIHSANARFSNASAEPLSDTSE----TVLQFKPSSP--MASSLLSSLQPPPPPPPPPPPLNR-----------------------------IHMFPSTSRPGPTTLTSAALSSAFSNLMLTSKGDQFSESSQKSENNLKDPSKIPQRFPPT-------------------FTQGPPPPPSPLEKYSSLDKDGNQLPKLKPLHWDKVRTAPDHSMVWDKIRSSSFEFDEEMIESLFGYDIKYSSRYDEAK--SPSPKKHILEPKRLQNITILSKALNVSADHICEALRQGAGLGLQQLEALIKMELTKEEEGMLTSYQGDIDGLGSAEKILKTILHIPFAFPRIEAMIYRETFEDEIALLRNSFSMLEDGCKELRSSRLFLKLLEAVLKTGNRMNIGTVRGGARAFKLDALLKLADVKGADGKTTLLHFVVKEIIRTEGIKASDSIIGKINQKNRSQTFEDREEAYREMGLDLVSGLTSELFNVRKTANIDFDAIASSLSNLFHGLAQLQHLVQTDLSKEEMNGSFVLSMRTFISYAEKKLKEMKEDKVRVLVLVREMTEYFHGNVSTDESNPLRIFVVVRDFLGMLDHVCKEIRNSKAPPASNRLAPFQ 790
            SQILH MI F+   L  L NA             + F  D       L + + SGE+E K + V E   A LGL  F++R                   S        +      + HA SHH H  R+ IT P+    N  R D+G +TR +V VL    A++V  +LGI  I GC+K RK  K+ +++                    A   ++D+                        E    S+   ++E+   N+E+ +SE  N  C +        + +     SV+  S    S T D+ TL ++  +DDESF S  D +S+N R SNASA  L ++S+     V   +P  P  +    + +L+   P       LN                               H  PS++R G   L S   SS   NL    K D  S S+Q  E  L    +   R   T                   F++GPPP   PL + + L +DG  LPKLKPLHWDKVR APD+SMVWDK+RSSSFE DEEMIESLFGY+++ S + DEAK  SPSP KH+LEPKRLQNITILSKALN +A+ +CEAL QG GL LQQLEAL++ME TKEEE  LT Y+GDI+ LGSAE+ +K +L +P AF R+EAM+YRETFEDE+  LRNSFS+LE+ CKELRSSRLFLKLLEAVLKTGNRMN+GT+RGGA+AFKLD LLKL+DVKG DGKTTLLHFVV+EIIR EGI+ SDSI+GKI+QKN+++T E++EE YR MGLDLVSGL++EL+N +KTA +D D +ASS+SNL  G+ +++ L+  +L  +E +G+ V SM++FI YAE++L+E++ D+ RVL  V+E+TEYFHGNVS +E+NPLRIFV+VRDFLGMLDHVCKE+R+SKAP   N LAPF+
Sbjct:    6 SQILHLMIFFVISFLLSLHNAEEGYLNVHGLQHHLHFMEDNAEAPQNLQIHKGSGEDEEKAVSVVENFRAFLGLNSFHKRTPSVGDSRNVSPSPSPIPYSEEEAPSPASAPAPAPHIHAGSHHPHRLRS-ITKPQ----NIHREDRGGITRILVAVLASTGAAVVICVLGI--ICGCRKHRKHEKKPTRVISVVGKKGGAKSASKVRLNPATTTTTDLIYLESLGMDLEQQHQQISCSKETCETVTSSRNHTLLEREETNQEVIKSEF-NDACSSSSTREIMSIHEDMIAESVKYDSDCVSSATGDKITLVNSYSSDDESFHSFGDSNSSNVRPSNASAGSLDESSDILSTNVSNIEPYQPTTLNQKSIRALELQSPRNGEREILNAPRSSNCEKNVTIPPAPPPPPPPPIKHFPDFHSSPSSARIGSKALCS---SSTLRNLSPPRKSDSSSGSNQTPEGQLSISPQNSSRPSETPPPVPPPPSPPPFLKANNGFSKGPPP--PPLPQATPLGRDGTPLPKLKPLHWDKVRAAPDNSMVWDKLRSSSFELDEEMIESLFGYNLQSSMKNDEAKCKSPSPSKHVLEPKRLQNITILSKALNSTAEQVCEALVQGNGLCLQQLEALVRMEPTKEEEAKLTGYKGDINELGSAERFVKALLKVPCAFQRVEAMLYRETFEDEVVHLRNSFSVLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGAKAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRVEGIRVSDSIMGKISQKNKTKTLEEKEEDYRRMGLDLVSGLSTELYNAKKTATLDLDVLASSVSNLSDGMEKIKRLIHKELCMDENSGNLVNSMKSFICYAEERLRELQGDESRVLSQVKEITEYFHGNVSKEEANPLRIFVIVRDFLGMLDHVCKELRSSKAPRTPNPLAPFK 926
[Close]
BLAST of XM_017373596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7D0Z9 (Formin-like protein {ECO:0000256|RuleBase:RU361260})

HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0
Identity = 419/902 (46.45%), Postives = 539/902 (59.76%), Query Frame = 0
 
Query:    6 QILHMIVFI--FFMLTPLMNAAMLF---------------------------NGDLHVLRVSGE---EENKGLVFEKISALLGLGRFYRRKQQSSPVE------------APALAPAPAPIYHHAHSHHRHSHRARITAPRRRRINKERSDQGIVTRNIVVLFIVSASLVFVLLGIVFIWGCKKFRKTRKETSKMA-------------ILHSSDIEN------------YRRSKGVG----------IIEKVNKEMARSEAQNVG--------CPAVGDIGTGN-----SVEKSSVGCGSQTSDEKTLRDAC-LADDESFQSPDDIHSANARFSNASAEPLSDTSETVLQFKPSSPMASSLLSSLQPPPPPPPPPPPLNRIHMFPSTSRPGPTTLTSAALSS------------AFSNLMLTSKGDQFSESSQKSENNLKDPSKIP---------QRFPPTFTQGPPPPPSPLEKYSSLDKDGNQLPKLKPLHWDKVRTAPDHSMVWDKIRSSSFEFDEEMIESLFGYDIKYSSRYDEAKS--PSPKKHILEPKRLQNITILSKALNVSADHICEAL-RQGAGLGLQQLEALIKMELTKEEEGMLTSYQGDIDGLGSAEKILKTILHIPFAFPRIEAMIYRETFEDEIALLRNSFSMLEDGCKELRSSRLFLKLLEAVLKTGNRMNIGTVRGGARAFKLDALLKLADVKGADGKTTLLHFVVKEIIRTEGIKASDSIIGKINQKNRSQTFEDREEAYREMGLDLVSGLTSELFNVRKTANIDFDAIASSLSNLFHGLAQLQHLVQTDLSKEEMNGSFVLSMRTFISYAEKKLKEMKEDKVRVLVLVREMTEYFHGNVSTDESNPLRIFVVVRDFLGMLDHVCKEIRNSKAPPASNRLAPFQ 790
            QILHMI  I  FF+L  L +  +L                              +  ++RVSG+   EE++  + +K  ALLG+ RF R +  SS  E                       + H H H  H        P+  +I ++ S++G + + +++  +VSA   FV+  + F W   KFRK +K  + MA             I+ S +  N            Y  S GV           I E VN ++ R E+++               +I + N     SV+  S   G+ +S +K +   C  +DDESF S +D HS+N R SNASA  LSD             ++ +L S++    P P   P   + +M   TS       TS+                A + + +TS          KS N L+  S IP          R   +    PPPPPS     + L KDG  LPKLKPLHWDKVR APD SMVWDK+RSSSFE DEEMIESLFGY+I+ SS+ DE KS  PSP KH+LEPKRLQNITILSKALNV+A+  CEAL   G GL LQQLEAL+KM  TKEEE  L+SY+GD + LG AE+ +K IL+IPFAF R  AM+YRETFEDE+  LRNSFSMLE+ CKELRSSRLFLKLLEAVLKTGNRMN+GT+RGGARAFKLDALLKLADVKG DG+T LLHFVV+E+IR+EG++ SDSI+GKINQ+N++QT E++EE YR MGLDLVSGL++EL+NV+KTA ID D +A+S+SNL  G+++L+HLV +DL      G FV SM+ F+++ + KLKE+KED+ R+L+LVRE+TEYFHGNVS DE+NPLRIFV+VRDFLGMLDHVCKE+R+SK   + N LAPF+
Sbjct:    6 QILHMISIITFFFILISLKSTHILIAEASLDASEYLKLQRLQEYYFMEEEKSENENQIVRVSGDDESEEDEVFLLKKFRALLGMRRFKRGRGSSSGSEYLSPSPSPSPTIEAEAPAPAPAPFLHKHVHSHHPFHKLNPIPKTHKIEEQNSEKGGL-KKVLIAVLVSAGAAFVVFSVGFFWVFGKFRKQKKSATTMANHMNKGRKKGKSKIVSSQNSANKVSSNPVIDDLLYLNSLGVDLEQQSCCLKKIPETVNTKLERKESESDQELVKSASFSSCAREIMSVNEDDPESVKYESSDVGNSSSGDKIIPVDCHSSDDESFHSFNDSHSSNIRLSNASAGSLSD-------------ISENLPSNVSKLSPIPHREPDHRKENMRIETSSDCIKNFTSSPSPPPPPPPPPPPPMPAINCIKITSP----PPLPHKSPNALQAASSIPPPPCPPPFLNRNSCSTKGPPPPPPSQFLPQTPLGKDGAPLPKLKPLHWDKVRAAPDGSMVWDKLRSSSFELDEEMIESLFGYNIQSSSKNDEGKSKTPSPSKHVLEPKRLQNITILSKALNVTAEQACEALLTAGDGLSLQQLEALVKMVPTKEEEEKLSSYKGDTNELGFAEQFVKAILNIPFAFQRAVAMLYRETFEDEVIHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGRTNLLHFVVQEMIRSEGMRVSDSIMGKINQRNKNQTVEEKEEDYRRMGLDLVSGLSTELYNVKKTATIDLDVLANSVSNLSEGMSKLRHLVDSDLKI----GDFVKSMKKFMNHGDMKLKELKEDEDRILLLVREITEYFHGNVSKDEANPLRIFVIVRDFLGMLDHVCKELRSSKMATSPNPLAPFR 885
[Close]
BLAST of XM_017373596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834LJL7 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7138905.1}))

HSP 1 Score: 671.389 bits (1731), Expect = 0.000e+0
Identity = 419/882 (47.51%), Postives = 526/882 (59.64%), Query Frame = 0
 
Query:    8 LHMIVFIFFMLTPLMN-----------AAMLFNGD-LHVLRVSG---EEENKGLVFEKISALLGLGRFYRRKQQSSPVEAPALAP------APAPIYHHAHSHHRHSHRARITAPRRRRINKERSDQGIVTRNIVVLFIVSASLVFVLLGIVFIWGCKKFRKTRKETSKMAILHSSDIENYRRSKGVGIIEKVN----------------------------------------------------KEMARSEAQNVGCPAVGDIGTGNSVEKSSVGCGSQTSD--EKTLRDACLADDESFQSPDDIHSANARFSNASAEPLSDTSETVLQFKPSSPMASSLLSSLQPPPPPPPPPPPLNRIHMFPSTSRPGPTTLTSAALSSAFSNLMLTSKGDQFSESSQKSENNLKDPSKIPQR-FPP-------------TFTQG--------PPPPPSPLEKYSSLDKDGNQLPKLKPLHWDKVRTAPDHSMVWDKIRSSSFEFDEEMIESLFGYDIKYSSRYDEAK--SPSPKKHILEPKRLQNITILSKALNVSADHICEALRQGAGLGLQQLEALIKMELTKEEEGMLTSYQGDIDGLGSAEKILKTILHIPFAFPRIEAMIYRETFEDEIALLRNSFSMLEDGCKELRSSRLFLKLLEAVLKTGNRMNIGTVRGGARAFKLDALLKLADVKGADGKTTLLHFVVKEIIRTEGIKASDSIIGKINQKNRSQTFEDREEAYREMGLDLVSGLTSELFNVRKTANIDFDAIASSLSNLFHGLAQLQHLVQTDLSKEEMNGSFVLSMRTFISYAEKKLKEMKEDKVRVLVLVREMTEYFHGNVSTDESNPLRIFVVVRDFLGMLDHVCKEIRNSKAPPASNRLAPFQ 790
            +HM   I  M   L +           AA  FNG+   + +V G    EE + L+ EK   LLGL  F      +   EAPA +P      APAP++    +  R  HR    +P+ R+  KE S+     + IVV    SA+  FVL  I  IW C+K R+ RK +S   +     +    R  G G ++KV+                                                    K   RSE  +  C A G+I    SV  S     +   D  EK   +A  +DDESF SP    S+N R SNASA  L D ++ +    P  P                    P +   +FPS S    ++ ++  +S A S+  L +        S  S +N     + P+R FPP              F++G        PPP PS    +  L KDG  LPKLKPLHWDKVR +PD SMVWDK+RSSSFEFDE MIESLFGY+++ S + DEAK  SP P KH+L+PKRLQNITILSKALN +A+ +C+AL QG GL LQQLEAL+KM  TKEEE  L+SY+GDI  LGS EK LK +L+IPFAF R EAM+YRETFEDE+  LR SFSMLE+ CKELRSSRLFLKLLEAVLKTGNRMNIGT+RGGARAFKLDALLKLADVKGADG+TTLLHFVV+EI+R+EGI+ S+SI+GKINQKN+++  E+REE YR MGLDLV+GL+ EL NV+KTA ID D +ASS+SNL +G+++LQ LV  DL  +   G+FV  MR F+ +AEK +KE++ED+ RVLV VRE+TEYFHGN+S DE+NPLRIFV+VRDFLGMLDHVCKE+R+SK P + N  APF+
Sbjct:    8 VHMFFLIILMFLSLQSTHILVVDGSLIAAEYFNGEKREIEKVPGGDEREEKEALILEKFRFLLGLRSFLTETPLTGENEAPAPSPTIEETPAPAPVHPVKVNPGRPFHRPN-PSPQPRKTRKEESNNKGRFKRIVVAVSASAAATFVLFSIGLIWVCRKVRRERKISSTNTV----SVYGNERGSGNGSMKKVSSDPELDPFYLDSIGAALEPPQAFPFKQNPETVKISLSNGNASSSKDEREGSEKGTVRSEPGD-SCSAAGEI---VSVHDSGELVKTYDPDECEKIEIEADSSDDESFHSPCGSLSSNLRLSNASAGSLPDITDFLSHPSPRPPPPPPPPPPPP---------RPTSNSQIFPSHS----SSCSTPTVSKAISSSTLPTSSSPRDSDSSSSGSN-----QTPKREFPPKPFVGIPPPPCPPPFSKGNGNYSLKTPPPAPSQQFHFMPLGKDGAPLPKLKPLHWDKVRASPDQSMVWDKLRSSSFEFDEAMIESLFGYNMQSSMKNDEAKSRSPPPSKHVLDPKRLQNITILSKALNATAEQVCDALLQGEGLCLQQLEALVKMAPTKEEEAKLSSYKGDIKDLGSTEKFLKAMLNIPFAFLRFEAMLYRETFEDEVVHLRKSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNIGTIRGGARAFKLDALLKLADVKGADGRTTLLHFVVQEIVRSEGIRVSESIMGKINQKNKTRNSEEREEDYRRMGLDLVAGLSFELCNVKKTATIDLDVLASSVSNLSNGMSKLQQLVGKDLFGDAKGGNFVHKMRFFLGHAEKNIKELREDEGRVLVHVREITEYFHGNLSKDEANPLRIFVIVRDFLGMLDHVCKELRSSKLPSSPNPQAPFR 862
[Close]
BLAST of XM_017373596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0F205 (Formin-like protein {ECO:0000256|RuleBase:RU361260})

HSP 1 Score: 669.848 bits (1727), Expect = 0.000e+0
Identity = 410/876 (46.80%), Postives = 533/876 (60.84%), Query Frame = 0
 
Query:   24 AAMLFNGD---LHVLRVSGEEENKG---LVFEKISALLGLGRFYRRKQQSSPVEAPALAPAPAPIYHHAHSHHRHSHRARITA------------PRRRRINKERSDQGIVTRNIVVLFIVSASLVFVLLGIVFIWGCKKFRKTRKETSK------------------------------MAILHSSDIENYRRSKGVGIIEK--VNKEMARSEAQNV-GCPAVGDIGTGNSVEKSSVGCGSQTSDEKTLRDACLADDESFQSPDDIHSANARFSNASAEPLSDTSETVLQFKPSSPMASSLLSSLQPP-----------PPPPPPPPPLNRIHMFPSTSRPGPTTLTSAALSSA------------FSNLMLTSKGDQFSE----SSQKSENNLKDPSKIPQRF---------------------------PPTFT-QGPPPPPSPLEKYSSLDKDGNQLPKLKPLHWDKVRTAPDHSMVWDKIRSSSFEFDEEMIESLFGYDIKYSSRYDEAKS--PSPKKHILEPKRLQNITILSKALNVSADHICEALRQGAGLGLQQLEALIKMELTKEEEGMLTSYQGDIDGLGSAEKILKTILHIPFAFPRIEAMIYRETFEDEIALLRNSFSMLEDGCKELRSSRLFLKLLEAVLKTGNRMNIGTVRGGARAFKLDALLKLADVKGADGKTTLLHFVVKEIIRTEGIKASDSIIGKINQKNRSQT-FEDREEAYREMGLDLVSGLTSELFNVRKTANIDFDAIASSLSNLFHGLAQLQHLVQTDLSKEEMNGSFVLSMRTFISYAEKKLKEMKEDKVRVLVLVREMTEYFHGNVSTDESNPLRIFVVVRDFLGMLDHVCKEIRNSKAPPASNRLAPFQ 790
            AA  FNGD     + +VSGE+E +G   L+ EK  ALLGL  F  +  Q    +  + +P+P+P                I+             P+  + + E  D G   R +++   VS    FV+ GI   + C KFRK RK + +                               A L  S   N   ++   I E+    +E  RSE+ NV    + G+I + +     SV   S   ++    +A  ++DESF S  D HS N R SNASA  +S+ SE  L  K S+   S + S +  P           PP PPPP   +++H+ PS SR   T +TS AL S+             S+  +TS+    S     S  ++ ++    ++ PQR+                             T++ + PPPPP    + + + K+G  LPKLKPLHWDKVR AP+ S VWDK+RSSSFEFDEEMIESLFGY+++   + DEAKS  PSP KH+L+PKRLQNITILSKALNV+AD +C+AL QG GL LQQLE L+ M LTK+EE   +SY+G+++ LGSAE+ +K IL +PFAF RIEA++YRETFEDE+  LR SFSMLE+ CKELRSSRLFLKLLEAVLKTGNRMN+GT+RGGA+AFKLDALLKLADVKG DGKTTLLHFVV+EI+R+EGI+ S+SI+GKINQ+ + Q     REE YR MGLDLVSGL+ EL N +KTA ID D +ASS+SNL  G+++L+HLV  DLS +E +G FV SMRTF+ +AEK + E++ED+ RVL  VRE+TEYFHG+VS DE+NPLRIFV+VRDFLGMLDHVCKE+R SK P + N LAPF+
Sbjct:   32 AAEFFNGDGRERDIEKVSGEDEREGEKALILEKFRALLGLKSFKIKNPQIGVFDYGSPSPSPSPTIEAPAPAPAPVPVQPISVHRHHPFHRRHPIPQPHKTHSEDRDGGRRARRVLIAVSVSVGATFVICGIGLFFFCIKFRKQRKRSKRPVVSKYLSSQNSVKQVSSNPGLDLFYLDSLGAALQDSQTVNKLLNQNTSIREREGSEQEAVRSESGNVCSSSSAGEIVSVHDDSGESVNYDSDKCNKTDCVEAISSNDESFHSLCDSHSLNVRLSNASAASVSNKSE-FLSPKGSNKSPSCVKSPMDLPYKGLALPPPPPPPLPPPPLCSSQLHILPSHSRSSSTQITSRALGSSTLPILSSPRNSDCSSTRITSRASGSSTLPILSPPRNSDSSSGSNQTPQRYLLPSPPNPPPRALVGIPPPPCPPPFSNANTYSLKTPPPPPYQFMQLTPMGKNGAPLPKLKPLHWDKVRAAPNRSTVWDKMRSSSFEFDEEMIESLFGYNLQTPMKSDEAKSKSPSPSKHVLDPKRLQNITILSKALNVTADQVCDALLQGEGLCLQQLETLVNMVLTKDEEAKFSSYKGEVNELGSAERFVKAILKVPFAFLRIEALLYRETFEDEVVHLRKSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGAKAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSESIMGKINQRKQDQKPRRKREEGYRRMGLDLVSGLSVELCNAKKTATIDLDVLASSVSNLSDGMSKLKHLVGKDLSVDEKSGKFVQSMRTFLGHAEKSINELREDEGRVLRHVREITEYFHGDVSKDEANPLRIFVIVRDFLGMLDHVCKELRCSKVPSSPNPLAPFR 906
[Close]
BLAST of XM_017373596.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5N5H4I4 (Formin-like protein {ECO:0000256|RuleBase:RU361260})

HSP 1 Score: 662.529 bits (1708), Expect = 0.000e+0
Identity = 437/921 (47.45%), Postives = 549/921 (59.61%), Query Frame = 0
 
Query:    7 ILHMIVFIFFMLTPLMNAAM-LFN------------------GDLHVLRVSGE-EENKGLVFEKISALLGLGRFYRRKQQSSPVEAPALAPAPAPIYHHAHSHHRHSHRARITAP-------RRRRINK----ERSDQGIVTRNIV-VLFIVSASLVFVLLGIVFIW---------------------GCKKFRKTR------KETSKMAILHS----------------SDIENYRRSKGVGIIEK--VNKEMARSEAQNVGCP--------AVGDIGTGNSVEKSSVGCGSQTSDEKTLRDACLADDESFQSPDDIHSANARFSNASA-----------------EP--------LSDTSETVLQFKPS----SPMASSLLSSLQPPPPPPPPPPPLNRIHMFPSTSRPGPTTLTSAAL--SSAFSNLMLTSKGDQFSESSQKSE-------NNLKDPSKIP------------QRFPPTFTQGPPPPPSPLEKYSSLDKDGNQLPKLKPLHWDKVRTAPDHSMVWDKIRSSSFEFDEEMIESLFGYDIKYSSRYDEAKS--PSPKKHILEPKRLQNITILSKALNVSADHICEALRQGAGLGLQQLEALIKMELTKEEEGMLTSYQGDIDGLGSAEKILKTILHIPFAFPRIEAMIYRETFEDEIALLRNSFSMLEDGCKELRSSRLFLKLLEAVLKTGNRMNIGTVRGGARAFKLDALLKLADVKGADGKTTLLHFVVKEIIRTEGIKASDSIIGKINQKNRSQTFEDREEAYREMGLDLVSGLTSELFNVRKTANIDFDAIASSLSNLFHGLAQLQHLVQTDLSKEEMNGSFVLSMRTFISYAEKKLKEMKEDKVRVLVLVREMTEYFHGNVSTDESNPLRIFVVVRDFLGMLDHVCKEIRNSKAPPASNRLAPFQ 790
            +L MI FI   L  L NAA   FN                   +L V RVSGE EEN   V EK  ALLGL  F++R    +P  A +  P+P+P           +               R R I+K     R D G   R +V VL    A++V  +LGIV+                       G K   K R        TS +  L S                   E    S+   ++E+   N+++ +SE  +            A  DI    +V+  S    S T D+    D+  +DDESF S  D +S+N R SNASA                 EP        L D  ET+++ K S    +P +S+   ++  PP PPPPPPP  + H   S S P  T + S A   SS   NL    K      S+Q  E        N   PS+ P             +   +F +GPPP   PL + + L KDG  LPKLKPLHWDKVR APDHSMVWDK+RSSSFE DEEMIESLFGY+++ S + DEAKS  PSP KH+LEPKRLQNITILSKALN +AD +CEAL QG GL LQQLEAL++MELTKEEEG LT Y+GDI  LGSAEK +K +L +PFAF R+EAM+YRETFEDE+  LRNSFS+LE+ CKELRSSRLFLKLLEAVLKTGNRMN+GT+RGGARAFKLD LLKL+DVKG DGKTTLLHFVV+EIIR EGI+ SDSI+GKI+QKN+++T E++EE YR MGLDLVSGL++EL+N +KTA +D D +ASS+SNL  G+ +++ L+  +L  +E +G+ V SM++FI YAE++L+E++ D+ RVL  V+E+TEYFHGNVS +E+NPLRIFV+VRDFLGMLDHVCKE+R+SKAP   N LAPF+
Sbjct:   18 LLLMIFFIVSFLLSLHNAAEECFNVHGLQHHLHFMEDNAEAPQNLQVHRVSGEDEENAVPVVEKFRALLGLNSFHKR----TPSAADS-GPSPSPYSEAEAPSPAPAPAPAPHIHAHSHHPHRLRSISKPQGIHREDSGGTARILVPVLVSAGAAVVICVLGIVWGCRKHRKHKKKPTSVISVFGQNGGAKSPSKVRLNPATITTTSDLIYLDSLGLDLEQQQQHISCSKETCETVTTSRNHTLLEREETNQQVMKSEFDDASSTSSTREIMSAHEDI-IAEAVKYDSDCANSATGDKIIPVDSYSSDDESFHSFGDSNSSNIRPSNASAGSLGDSSDVLSTNVSNIEPCLEAHSINLPDQPETIIRNKESELLTAPCSSNCEKNVNAPPAPPPPPPPPIK-HFLHSHSSPSSTRIASKASCSSSTLRNLSPPRKSGSSCGSNQTPEGGFSASPQNSSRPSETPPPIPPPPCPPPFSKANNSFLKGPPP--PPLPQATPLGKDGTPLPKLKPLHWDKVRAAPDHSMVWDKLRSSSFELDEEMIESLFGYNLQGSMKSDEAKSKSPSPSKHVLEPKRLQNITILSKALNSTADQVCEALVQGNGLCLQQLEALVRMELTKEEEGKLTGYKGDISELGSAEKFVKAVLRVPFAFQRVEAMLYRETFEDEVVHLRNSFSVLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRVEGIRVSDSIMGKISQKNKTKTLEEKEEDYRRMGLDLVSGLSTELYNAKKTATLDLDVLASSVSNLSDGMEKIKRLIHKELCMDENSGNLVNSMKSFICYAEERLRELQGDESRVLSQVKEITEYFHGNVSKEEANPLRIFVIVRDFLGMLDHVCKELRSSKAPRTPNPLAPFK 929
Match NameStatsDescription
A0A540N261E-Value: 0.000e+0, PID: 46.90Formin-like protein {ECO:0000256|RuleBase:RU361260... [more]
A0A2R6RAK4E-Value: 0.000e+0, PID: 47.87Formin-like protein {ECO:0000256|RuleBase:RU361260... [more]
A0A6J1A832E-Value: 0.000e+0, PID: 46.18Formin-like protein {ECO:0000256|RuleBase:RU361260... [more]
A0A5N6QSU7E-Value: 0.000e+0, PID: 48.83Formin-like protein {ECO:0000256|RuleBase:RU361260... [more]
A0A5C7I7G8E-Value: 0.000e+0, PID: 49.42Formin-like protein {ECO:0000256|RuleBase:RU361260... [more]
A0A5N5HXK0E-Value: 0.000e+0, PID: 45.18Formin-like protein {ECO:0000256|RuleBase:RU361260... [more]
A0A7J7D0Z9E-Value: 0.000e+0, PID: 46.45Formin-like protein {ECO:0000256|RuleBase:RU361260... [more]
A0A834LJL7E-Value: 0.000e+0, PID: 47.51(Uncharacterized protein {ECO:0000313|EMBL:KAF7138... [more]
A0A7J0F205E-Value: 0.000e+0, PID: 46.80Formin-like protein {ECO:0000256|RuleBase:RU361260... [more]
A0A5N5H4I4E-Value: 0.000e+0, PID: 47.45Formin-like protein {ECO:0000256|RuleBase:RU361260... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.