MKSTEDNNISNELIQRMKPEHILLLDSKVPKQFISFDEQYLRRCLEFIQI
TANKPTTCSLDSDFTVFSETKNMLDILNSPLFHKLGSTIRDRSSLVDLRN
PKCSSLLCSPSESDSSTSGKSEKDLAVHNDHANVSDHVPKSVGPLSTPFA
SAAAHLSSFMPATSSRWMLHNRGNQKCPHYVFSSDNQRDIYFANLSKVDS
PNKKVTDYMYAFLSRAAKRKEGEMCEQEFNLIGRMKVSSSITILSDGTEV
METSFVLYGFDDNCVEERQTKSHNLEKSKGLSVKMSGVLKGSRTFRRRRS
MRLDVSTSMKDINSRQACEGAGVEDHFTPNLELAAIVVKEHISPANKNVK
VGGWGLKFLNKTGQRHLNASLQTEVPLQCHSHSNSNCSTSIDIIIPASFH
GLPRSKTGSPSSLIDRWISGGKCDCGGWDMGCALTILQTKQTEAFCLAKT
FDIFAEGSKKDLATMKMVNVRDGSYCIPFQSTLSALQSFSIAVAILHAQI
HSPNRQLSIG
| Relationships |
|---|
| The polypeptide, XM_017374908.1, derives from mRNA, XM_017374908.1. |

Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
Match: A0A5B6Z913 ((Uncharacterized protein {ECO:0000313|EMBL:MPA39563.1}))
HSP 1 Score: 400.979 bits (1029), Expect = 4.548e-131
Identity = 230/598 (38.46%), Postives = 337/598 (56.35%), Query Frame = 0
Query: 1 MKSTEDNNISNELIQRMKPEHILLL-----------------------DSKVPKQFISFDEQYLRRCLEFIQITA-------------------------NKPT-----TCSLDSDFTV-----------------------FSETKNMLDILNSPLFHKLGSTIRD----RSSLVDLRNPKCSSLLCSPSESDSSTSGKSEKDLAVHNDHANVSDHVPKSVGPLSTPFASAAAHLSSFMPATSSRWMLHNRGNQKCPHYVFSSDNQRDIYFANLSKVDSPNKKVTDYMYAFLSRAAKRKEGEMCEQEFNLIGRMKVSSSITILSDGTEVMETSFVLYGFDDNCVEERQTKSHNLEKSKGLSVKMSGVLKGSRTFRRRRSMRLDVSTSMKDINSRQACE-----------GAGVEDHFTPNLELAAIVVKEHISPANKNVKVGGWGLKFLNKTGQRHLNASLQTEVPLQCHSHSNSNCSTSIDIIIPASFHGLPRSKTGSPSSLIDRWISGGKCDCGGWDMGCALTILQTKQTEAFCLA--------KTFDIFAEGSKKDLATMKMVNVRDGSYCIPFQSTLSALQSFSIAVAILHAQ 499
++ +DN++S L++++KPE +L+L D+K+PK ISFDE+YLRRCLE I I+A N P C L + F V + K+M++IL SPLF + G+ D R++L+D++ CS + SP S+S EK V +H S+ V K + +S+ S + SS + A ++ ML PHYVFS D+QR++Y ANL K +SP+ +V DYMY F S+A +KE ++ E +++G+M+VS+S T+ + +E+MET FVL+G +DNC E +T SH L K++GLS K+ V K S + ++R S + + ++ + +S + C+ E+H PNLELAAI+VK+H+ + ++GGWGLKFL K G R NASL+T VP +C + +C TS+DI++PA FHG PR+++G PSSL +RW SGG+CDCGGWD+GC LT+L T+ +E + K+FD+F +GS++ A MKMVN+ DG Y + FQSTLSALQSFSIAVAI+H Q
Sbjct: 26 IEVADDNSLSRRLVKKVKPECVLILNVKESQTRENCIEESLLQTIPGLDNKIPKHIISFDERYLRRCLELIYISASKATSSLNISSNLGFSRAGVLSNSSNTPQIRSRYACDL-AKFIVECPLAVGTGNAVISPAGDWFVGKITGCKSMMNILKSPLFRQFGALNSDVNHGRTNLIDVKGEICSDFITSPGGLSISSSQNLEKGTVVLGNHRYGSEPVHKRLVSVSST-NSTLSDQSSSVSAAITQGMLQCTWKAGFPHYVFSIDDQREVYVANLLKAESPDDRVLDYMYMFHSKAVDKKERDIRLDESDIVGKMRVSTSFTLSPNNSEIMETEFVLFGLNDNCAGETKTSSHVLRKNRGLSRKVVEVFKTSLSSKQRASSKFGGTNAILENSSLEPCQDLCNSLHPLGRANLSENHLPPNLELAAIIVKDHLHDNRQEAEIGGWGLKFLKKVGIRQTNASLETSVPSECCLQNTGDCCTSMDILVPAGFHGGPRTRSGGPSSLTERWKSGGRCDCGGWDIGCPLTVLNTRCSEKKAVTPSDTQGECKSFDLFIQGSEQGTAIMKMVNIHDGLYFVHFQSTLSALQSFSIAVAIIHTQ 621
Match: A0A5B7B7C3 ((Uncharacterized protein {ECO:0000313|EMBL:MPA64807.1}))
HSP 1 Score: 398.282 bits (1022), Expect = 4.341e-130
Identity = 230/561 (41.00%), Postives = 330/561 (58.82%), Query Frame = 0
Query: 14 IQRMKPEHILLLDSKVPKQFISFDEQYLRRCLEFIQITANKPTTCSLDSDFTVFSET----------------------------------------------------KNMLDILNSPLFHKLGSTIRD----RSSLVDLRNPKCSSLLCSPSESDSSTSGKSEKDLAVHNDHANVSDHVPKSVGPLSTPFASAAAHLSSFMPATSSRWMLHNRGNQKCPHYVFSSDNQRDIYFANLSKVDSPNKKVTDYMYAFLSRAAKRKEGEMCEQEFNLIGRMKVSSSITILSDGTEVMETSFVLYGFDDNCVEERQTKSHNLEKSKGLSVKMSGVLKGSRTFRRRRSMRLDVSTSMKDINSRQACE-----------GAGVEDHFTPNLELAAIVVKEHISPANKNVKVGGWGLKFLNKTGQRHLNASLQTEVPLQCHSHSNSNCSTSIDIIIPASFHGLPRSKTGSPSSLIDRWISGGKCDCGGWDMGCALTILQTKQTEAFCLA--------KTFDIFAEGSKKDLATMKMVNVRDGSYCIPFQSTLSALQSFSIAVAILHAQ 499
IQ + IL L++++PK ISFDE+YLRRCLE I I+A+K T+ ++ SDF SET K+M++IL SPLF++ G+ D R++L+D + S + S S+S K EK++ + N H S V K + LS+ ++++ SS + AT + ML PH+VFS D+QR++Y ANL K +SP+ KV +YMY F SRA +KE ++CE + +L+G+M+VS+S + + +E+MET FVL+G DNCV E QT SH L K+KGLS K+ + K ++R S + ++S+ + +SR C+ + E+H PNLELAAI+VK+H+ + ++GGWGLKFL K G R NASL+T VP +C + +C TS+DI++PA FHG PR+++G PSSL +RW SGG+CDCGGWD+GC LT+L T+ +E + K+FD+F +GS++ A MKMVN+ DG Y + FQSTLSALQSFSIAVAI+H Q
Sbjct: 62 IQESFLQGILSLENRIPKYIISFDERYLRRCLELIYISASKATSFNISSDFLGSSETGVLSNGSSSQKISSRYACDLAKFIIECPLVAGIGNAVISPAGDWCVGRITGSKSMMNILKSPLFYQFGALDSDVKFGRTNLLDNKGAMYSDFMSSRGGLSISSSQKLEKEMVIGN-HGYGSGPVHKRLVSLSSTNSTSSDQSSSSVSATITHGMLQCTWKDGFPHHVFSVDDQREVYVANLFKAESPDDKVLEYMYMFHSRAGSKKEHDICENDSDLVGKMRVSTSFKLCPNNSEIMETEFVLFGSIDNCVGEVQTSSHILRKNKGLSKKVVEIFKT----KQRTSSKFGGTSSILENSSRAPCQDLSNNLDPQVKASLSENHPPPNLELAAIIVKDHLHDNRQEAEIGGWGLKFLKKVGIRQTNASLETSVPSECCLQNTGDCCTSMDILVPAGFHGGPRTRSGGPSSLTERWKSGGRCDCGGWDIGCPLTVLNTRCSEKKAVTPSDTQGECKSFDLFIQGSEQGTAIMKMVNIHDGLYFVHFQSTLSALQSFSIAVAIIHTQ 617
Match: A0A5B6Z6C7 ((Uncharacterized protein {ECO:0000313|EMBL:MPA39561.1}))
HSP 1 Score: 392.889 bits (1008), Expect = 6.409e-128
Identity = 235/604 (38.91%), Postives = 333/604 (55.13%), Query Frame = 0
Query: 1 MKSTEDNNISNELIQRMKPEHILLL-----------------------DSKVPKQFISFDEQYLRRCLEFIQIT-------------------------ANKPT-----TCSLD--------------------SDFTV--FSETKNMLDILNSPLFHKLGSTIRD----RSSLVDLRNPKCSSLLCSPSESDSSTSGKSEKDLAVHNDHANVSDHVPKSVGPLSTPFASAAAHLSSFMPATSSRWMLHNRGNQKCPHYVFSSDNQRDIYFANLSKVDSPNKKVTDYMYAFLSRAAKRKEGEMCEQEFNLIGRMKVSSSITILSDGTEVMETSFVLYGFDDNCVEERQTKSHNLEKSKGLSVKMSGVLKGSRTFRRRRSMRLDVSTSMKDINSRQACE-----------GAGVEDHFTPNLELAAIVVKEHISPANKNVKVGGWGLKFLNKTGQRHLNASLQTEVPLQCHSHSNSNCSTSIDIIIPASFHGLPRSKTGSPSSLIDRWISGGKCDCGGWDMGCALTILQTK----------QTEAFCLAKTFDIFAEGSKKDLATMKMVNVRDGSYCIPFQSTLSALQSFSIAVAILHAQIHSPN 504
++ +DN++S L++++KPE +L+L D+K+PK ISFDE+YLRRCLE I I+ +N P C L D+ V + K+M++IL SPLF + G+ D R++L+D++ CS + SP S+S EK V +H S+ V K + +S+ S + SS + A ++ ML PHYVFS D+QRD+Y ANL K +SP+ +V DYMY F SRA +KE ++ E +++G+M+VS+S T+ + +E+MET FVL+G +DNC E +T SH L K++GLS K+ V K S + ++R S + + ++ + +S + C+ E+H PNLELAAI+VK HI + +GGWGLKFL K G R NA L+ VP C S +CSTS+DI++PA FHG PR++ G PSSL +RW SGG CDCGGWD+GC LT+L K T+ C K+FD+F +GS++D TMKMVN+ DG Y + FQS LSALQSFSIAVAI+H + SPN
Sbjct: 26 IEVADDNSLSRRLVKKVKPECVLILNVKESQTRENCIEESLLQTIPGLDNKIPKHIISFDERYLRRCLELIYISASKATSSLNISSNLGFSRAGVLSNSSNTPQIRSRYACDLARFIVECPLAVGTGNAVISPAGDWFVGKITGCKSMMNILKSPLFRQFGALNSDVNHGRTNLIDVKGEICSDFITSPGGLSISSSQNLEKGTVVLGNHRCGSEPVHKRLVSVSST-NSTLSDQSSSVSAAITQGMLQCTWKAGFPHYVFSIDDQRDVYVANLLKAESPDDRVLDYMYMFHSRAVDKKERDIRLDESDIVGKMRVSTSFTLCPNNSEIMETEFVLFGLNDNCAGETKTSSHVLRKNRGLSRKVVEVFKTSLSSKQRASSKFGGTNAILENSSLEPCQDLCNSLNPLGRANLSENHLPPNLELAAIIVKTHIRDNRQEAGIGGWGLKFLKKVGTRQANA-LEASVPSDCCLRSVGDCSTSMDILVPADFHGGPRTRNGGPSSLTERWRSGGHCDCGGWDIGCPLTVLNYKSSKKETVPPSDTQGEC--KSFDLFMQGSEQDAPTMKMVNIHDGLYFVNFQSNLSALQSFSIAVAIIHTR--SPN 623
Match: A0A5B6Z5U0 ((Uncharacterized protein {ECO:0000313|EMBL:MPA39562.1}))
HSP 1 Score: 389.808 bits (1000), Expect = 9.086e-127
Identity = 233/605 (38.51%), Postives = 332/605 (54.88%), Query Frame = 0
Query: 1 MKSTEDNNISNELIQRMKPEHILLL-----------------------DSKVPKQFISFDEQYLRRCLEFIQITA-------------------------NKPT-----TCSLDSDFTV-----------------------FSETKNMLDILNSPLFHKLGSTIRD----RSSLVDLRNPKCSSLLCSPSESDSSTSGKSEKDLAVHNDHANVSDHVPKSVGPLSTPFASAAAHLSSFMPATSSRWMLHNRGNQKCPHYVFSSDNQRDIYFANLSKVDSPNKKVTDYMYAFLSRAAKRKEGEMCEQEFNLIGRMKVSSSITILSDGTEVMETSFVLYGFDDNCVEERQTKSHNLEKSKGLSVKMSGVLKGSRTFRRRRSMRLDVSTSMKDINSRQACE-----------GAGVEDHFTPNLELAAIVVKEHISPANKNVKVGGWGLKFLNKTGQRHLNASLQTEVPLQCHSHSNSNCSTSIDIIIPASFHGLPRSKTGSPSSLIDRWISGGKCDCGGWDMGCALTILQTK----------QTEAFCLAKTFDIFAEGSKKDLATMKMVNVRDGSYCIPFQSTLSALQSFSIAVAILHAQIHSPN 504
++ +DN++S L++++KPE +L+L D+K+PK ISFDE+YLRRCLE I I+A N P C L + F V + K+M++IL SPLF + G+ D R++L+D++ CS + SP S+S EK V +H S+ V K + +S+ S + SS + A ++ ML PHYVFS D+QR++Y ANL K +SP+ +V DYMY F S+A +KE ++ E +++G+M+VS+S T+ + +E+MET FVL+G +DNC E +T SH L K++GLS K+ V K S + ++R S + + ++ + +S + C+ E+H PNLELAAI+VK HI + +GGWGLKFL K G R NA L+ VP C S +CSTS+DI++PA FHG PR++ G PSSL +RW SGG CDCGGWD+GC LT+L K T+ C K+FD+F +GS++D TMKMVN+ DG Y + F S LSALQSFSIAVAI+H + SPN
Sbjct: 26 IEVADDNSLSRRLVKKVKPECVLILNVKESQTRENCIEESLLQTIPGLDNKIPKHIISFDERYLRRCLELIYISASKATSSLNISSNLGFSRAGVLSNSSNTPQIRSRYACDL-AKFIVECPLAVGTGNAVISPAGDWFVGKITGCKSMMNILKSPLFRQFGALNSDVNHGRTNLIDVKGEICSDFITSPGGLSISSSQNLEKGTVVLGNHRYGSEPVHKRLVSVSST-NSTLSDQSSSVSAAITQGMLQCTWKAGFPHYVFSIDDQREVYVANLLKAESPDDRVLDYMYMFHSKAVDKKERDIRLDESDIVGKMRVSTSFTLCPNNSEIMETEFVLFGLNDNCAGETKTSSHVLRKNRGLSRKVVEVFKTSLSSKQRASSKFGGTNAILENSSLEPCQDLCNSLHPLGRANLSENHLPPNLELAAIIVKTHIRDNRQEAGIGGWGLKFLKKVGTRQANA-LEASVPSDCRLRSVGDCSTSMDILVPADFHGGPRTRNGGPSSLTERWRSGGHCDCGGWDIGCPLTVLNYKSSKKETVPPSDTQGEC--KSFDLFMQGSEQDAPTMKMVNIHDGLYFVNFPSNLSALQSFSIAVAIIHTR--SPN 623
Match: A0A5J5ADG5 (CCT domain-containing protein {ECO:0000259|PROSITE:PS51017})
HSP 1 Score: 380.563 bits (976), Expect = 1.577e-118
Identity = 230/596 (38.59%), Postives = 334/596 (56.04%), Query Frame = 0
Query: 4 TEDNNISNELIQRMKPEHILLL-----------------------DSKVPKQFISFDEQYLRRCLEFIQITANKPTTCSLDS-------------------------------------------------DFTV--FSETKNMLDILNSPLFHKLGSTIRD----RSSLVDLRNPKCSSLLCSPSESDSSTSGKSEKDLAVHNDHANVSDHVPKSVGPLSTPFASAAAHLSSFMPATSSRWMLHNRGNQKCPHYVFSSDNQRDIYFANLSKVDSPNKKVTDYMYAFLSRAAKRKEGEMCEQEFNLIGRMKVSSSITILSDGTEVMETSFVLYGFDDNCVE-ERQTKSHNLEKSKGLSVKMSGVLKGSRTFRRRRSMRLDVSTSMKDINSRQACE-----------GAGVEDHFTPNLELAAIVVKEHISPANKNVKVGGWGLKFLNKTGQRHLNASLQTEVPLQCHSHSNSNCSTSIDIIIPASFHGLPRSKTGSPSSLIDRWISGGKCDCGGWDMGCALTILQTK----------QTEAFCLAKTFDIFAEGSKKDLATMKMVNVRDGSYCIPFQSTLSALQSFSIAVAILHAQ 499
+DN++S L++++ PE +L+L D+++PK +SFDE YLR CLE I I+A+K T+ ++ + D+ V + +K+M++IL SPLFH+ G+ D R++L+ + CS + SPS S+S K EK+ + N H V + + +S+ ++ + SS AT + ML PHYVFS D+Q++ Y ANL K +SP+ KV DY+Y F RA +KE ++CE E +L+G+M+VS+S + + +E+MET FVL+G +DN V E++T SH L K+KGLS K+ V K S + ++RR+ + ++S+ D +SR + E+H PNLELAAI+VK+HI + ++GGWGLKFL K G + NASL+T VP +C + +C TS+DI+IPA FHG PR++ G PSSL +RW SGG CDCGGWD+GC LTIL T+ + + C K+FD+F +GS++ A MKMVN+ G Y I FQSTLSALQSFSIAVAI+H Q
Sbjct: 474 ADDNSMSKSLVEKVNPECVLILNGKESRARESCIQESSLHGILSLDNRIPKYILSFDESYLRHCLELIYISASKATSINISTNLGSSKTVVLSNGSSSPRISSRYACDLAKFIIECPLVAGIGNAVINYAGDWCVGRITGSKSMMNILKSPLFHQFGALDSDINFGRTNLISNKGASCSDFMSSPSGLSISSSQKLEKETVLGN-HGYGLGPVHRRLVSISSTNSTLSDQSSSSGSATIMQGMLQCTWKAGFPHYVFSVDDQKEAYVANLFKAESPDDKVFDYLYMFHLRAVGKKEHDICENESDLVGKMRVSTSFKLCPNNSEIMETEFVLFGSNDNFVGGEKKTSSHILRKNKGLSKKVMEVFKSSHSNKQRRTSKFGGTSSILDNSSRAQSQDLSNNLDPQIRATFSENHLLPNLELAAIIVKDHIRDNLQEAEIGGWGLKFLKKVGLKQTNASLETLVPSKCCLRNTGDCGTSMDILIPAGFHGGPRTRNGGPSSLTERWRSGGHCDCGGWDIGCPLTILNTRPSKKKVATPSEIQGDC--KSFDLFIQGSEQGTAIMKMVNIHHGLYFIHFQSTLSALQSFSIAVAIIHTQ 1066
Match: A0A5J5C0G5 ((Uncharacterized protein {ECO:0000313|EMBL:KAA8548875.1}))
HSP 1 Score: 347.821 bits (891), Expect = 9.597e-112
Identity = 191/463 (41.25%), Postives = 271/463 (58.53%), Query Frame = 0
Query: 70 TKNMLDILNSPLFHKLGSTIRD----RSSLVDLRNPKCSSLLCSPSESDSSTSGKSEKDLAVHNDHANVSD--HVPKSVGPLSTPFASAAAHLSSFMPATSSRWMLHNRGNQKCPHYVFSSDNQRDIYFANLSKVDSPNKKVTDYMYAFLSRAAKRKEGEMCEQEFNLIGRMKVSSSITILSDGTEVMETSFVLYGFDDNCVEERQTKSHNLEKSKGLSVKMSGVLKGSRTFRRRRSMRLDVSTSMKDINS----RQACEGAG-------VEDHFTPNLELAAIVVKEHISPANKNVKVGGWGLKFLNKTGQRHLNASLQTEVPLQCHSHSNSNCSTSIDIIIPASFHGLPRSKTGSPSSLIDRWISGGKCDCGGWDMGCALTILQTKQTEAFCL--------AKTFDIFAEGSKKDLATMKMVNVRDGSYCIPFQSTLSALQSFSIAVAILHAQIHSPNRQL 507
+K+M++IL SPLF + G+ RD R + +D++ C+ SP +S K EK+ V +H S+ H G + S + SS + A ++ ML PHYVFS D+QR++Y AN K +SP+ +V DYMY F S +KE ++ E E +L+G+M+VS+S T+ + E+MET FVL+G +DNC E QT SH +K +GLS KM V K S + + R S + + ++ + +S + C E+H PNLELAAI+VK HI + +GGWGLKFL K G N SL+ P +C + +CSTS+DI++PA FHG PR++ G PSSL +RW SGG+CDCGGWD+GC LT+L + + L K+FD+F +GS++D +KMVN+ DG Y + FQS LSALQSFSIAVAI+H + P Q+
Sbjct: 52 SKSMMNILKSPLFRQFGALDRDVNCGRINFIDVKGEICADFNSSPGGLSFRSSRKLEKERVVLGNHRYGSEPVHTRLVSGSSTNSTLSDQSSSSSSVSAAITQGMLQCTWRAGFPHYVFSIDDQREVYVANSLKAESPDDRVLDYMYVFHSGVCDKKEHDIHENESDLVGKMRVSTSFTVCPNNLEIMETEFVLFGLNDNCAGETQTSSHIFKKKRGLSKKMVEVFKTSHSSKHRTSSKFGGTNAILENSSFELSQDLCNNLNPLGRANLSENHLLPNLELAAIIVKTHIRDNRQEAGIGGWGLKFLKKVGTGQANVSLEASAPSECCPRNFGDCSTSMDILVPAGFHGGPRTRNGGPSSLTERWRSGGRCDCGGWDIGCPLTVLNYRPNKKETLPPADTQGECKSFDLFIQGSEQDAPIVKMVNIHDGLYSVNFQSNLSALQSFSIAVAIIHTRSPKPQTQI 514
Match: A0A7N2LZ62 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:QL06p020863:mrna}))
HSP 1 Score: 350.132 bits (897), Expect = 3.590e-111
Identity = 214/553 (38.70%), Postives = 304/553 (54.97%), Query Frame = 0
Query: 25 LDSKVPKQFISFDEQYLRRCLEFIQITANKPTTCSL---------------------------DSDFTVFS------------------------ETKNMLDILNSPLFHKLGSTIRD----RSSLVDLRNPKCSSLLCSPSESDSSTSGKSEKDLAVHNDHANVSDHVPKS-VGPLSTPFASAAAHLSSFMPATSSRWMLHNRGNQKCPHYVFSSDNQRDIYFANLSKVDSPNKKVTDYMYAFLSRAAKRKEGEMCEQEFNLIGRMKVSSSITILSDGTEVMETSFVLYGFDDNCVEERQTKSHNLEKSKGLSVKMSGVLKGSRTFRRRRSMRLDVSTSMKD-------INSRQACEGAG----VEDHFTPNLELAAIVVKEHISPANKNVKVGGWGLKFLNKTGQRHLNASLQTEVPLQCHSHSNSNCSTSIDIIIPASFHGLPRSKTGSPSSLIDRWISGGKCDCGGWDMGCALTILQTKQTEAFCL-------AKTFDIFAEGSKKDLATMKMVNVRDGSYCIPFQSTLSALQSFSIAVAILHAQIHSP 503
LDS++PK +S DE+YLRRCL I I+A+K CS DS +F +K+M+++L SPLFH+ G+ + RS+L D++ C ++ SPS S+ K+ K+ + SD K V ST + SS A+ S+ ML PH+VFS+D+QR+IY AN+ KV+S + K DYMY+F S+ +K+ +C+ E L+G+MKVS+S T+ D +++MET FVLYG ++NC E T H+L K+KGLS K++ K S ++R + S+++ + +++R+ + G +E+H PN ELAAIVVK+H+ + +VGGWGLKFL K+G R AS + V + + +CSTS+DI+IP HG P +K G PS+L +RW SGG CDCGGWD+GC LTIL+T+ T+ L K FDIF +GS+ T++M VRDG Y I FQ LSALQSFSIAVAI+H I SP
Sbjct: 78 LDSRIPKHLVSIDEKYLRRCLGLIHISASKAARCSTSMNLSSLKMSILSDSLNPAKIENRYSCDSARFIFECPLESGTGGVAVSPAGRWIVGTIMGSKSMMNVLKSPLFHQFGALDGNANFTRSNLNDIKGSICYDIVDSPSGLSISSPQKTNKEPPSLGSQTDGSDRAHKRRVSMSSTNSTCSDQSSSSSASASVSQGMLQCTWKGGLPHFVFSADDQREIYLANVWKVESTDDKAVDYMYSFHSKKGGQKDLSICDNESQLVGKMKVSASFTLCPDNSKIMETEFVLYGANENCDIETNTSKHSLRKNKGLSKKVAEAFKLSHLSKQRNVSKFGGSSAILENCSWDPSLDTRRNLDALGRAKKLENHLLPNFELAAIVVKDHLRDKRQE-EVGGWGLKFLKKSGPRQTVASPEASVHCESSGRNTGDCSTSVDILIPEGLHGGPITKNGGPSTLTERWRSGGHCDCGGWDIGCPLTILKTRSTKDEILPEVEIEECKPFDIFKQGSQHTAPTLRMETVRDGLYFIHFQPPLSALQSFSIAVAIIH--IRSP 627
Match: A0A2I4DSE6 ((uncharacterized protein LOC108983015 {ECO:0000313|RefSeq:XP_018810070.2, ECO:0000313|RefSeq:XP_018810072.2}))
HSP 1 Score: 345.125 bits (884), Expect = 3.399e-109
Identity = 218/584 (37.33%), Postives = 309/584 (52.91%), Query Frame = 0
Query: 10 SNELIQRMKPEHILLLDSK------------------VPKQFISFDEQYLRRCLEFIQITANKPTTC---------------------------SLDSDFTVFS------------------------ETKNMLDILNSPLFHKLGSTIRD----RSSLVDLRNPKCSSLLCSPSESDSSTSGKSEKDLAVHNDHANVSDHVPKSVGPLSTPFASAAAHLSSFMPATSSRWMLHNRGNQKCPHYVFSSDNQRDIYFANLSKVDSPNKKVTDYMYAFLSRAAKRKEGEMCEQEFNLIGRMKVSSSITILSDGTEVMETSFVLYGFDDNCVEERQTKSHNLEKSKGLSVKMSGVLKGSRTFRRRRSMRLDVSTSMKD----------INSRQACEGA-GVEDHFTPNLELAAIVVKEHISPANKNVKVGGWGLKFLNKTGQRHLNASLQTEVPLQCHSHSNSNCSTSIDIIIPASFHGLPRSKTGSPSSLIDRWISGGKCDCGGWDMGCALTILQTK----------QTEAFCLAKTFDIFAEGSKKDLATMKMVNVRDGSYCIPFQSTLSALQSFSIAVAILHAQ 499
S EL++R+ H ++L+ K +PK +S DE+YLR CLE I I A+K C + DS +F +K+M++IL SPLFH G+ + RS+L D+R C ++ SPS S+ K +K+ V H + SD V K + +S+ ++ SS A+ S+ ML PH+VFS+D+Q + Y ANL KV S + K DY+Y+F SR A +K+ C+ E +L+G+MKVS+S TI D +++MET F+LY D NC E T + +L K+KGLS K+ V + S + ++R + S +M + N+ GA E+ F PN ELAAI+VK+H+ ++ + GGWGLKFL K G + SL+ VP + + + NCSTS+DI+IPA HG PR+K PSSLI+RW SGG CDCGGWD+GC LTIL+TK +T+ C K D+F +GS+ ++M+NV DG Y + FQ LSALQSFSIAVAI+H Q
Sbjct: 50 SKELVRRINSPHAIILNVKQPQLCTGCNLRNCVLERRIPKHMVSVDEKYLRHCLELININASKAARCNGSTNLRSLKMGILSDSLNPAKIRSRDTYDSASFIFECPLDSGAGGVVVSPAGQWIVGTIMGSKSMMNILKSPLFHPFGALDGNDNFRRSNLNDVRRSVCYDIVESPSGLSISSPQKLKKESPVTGSHKSGSDSVNKRLVSMSSTISTCPDQPSSSASASVSQGMLQCVWKGGLPHFVFSADDQGEAYIANLQKVGSTDDKAVDYIYSFYSRKAGQKDHRSCDNESHLVGKMKVSASFTICPDSSKIMETEFILYSSDANCGIETHTSNLSLRKNKGLSKKVVEVFRASHSSKQRTFSKFGGSGTMLENCSLESSVDTSNNLDEIGGAHKFENPFLPNFELAAIIVKDHLHDYHRE-ETGGWGLKFLKKRGPKQKIDSLEASVPCESCARNTGNCSTSMDILIPAGLHGGPRTKNCGPSSLIERWRSGGHCDCGGWDIGCPLTILKTKLSKEENLPKLETQDEC--KLVDVFKQGSQHAAPPLRMINVHDGLYFVHFQPLLSALQSFSIAVAIIHTQ 630
Match: A0A5N6RBD9 ((Uncharacterized protein {ECO:0000313|EMBL:KAE8076109.1}))
HSP 1 Score: 344.354 bits (882), Expect = 5.355e-109
Identity = 215/549 (39.16%), Postives = 299/549 (54.46%), Query Frame = 0
Query: 25 LDSKVPKQFISFDEQYLRRCLEFIQITANKPTTC---------------------------SLDSDFTVFS------------------------ETKNMLDILNSPLFHKLGSTIRDR----SSLVDLRNPKCSSLLCSPSESDSSTSGKSEKDLAVHNDHANVSDHVPKSVGPLSTPFASAAAHLSSFMPATSSRWMLHNRGNQKCPHYVFSSDNQRDIYFANLSKVDSPNKKVTDYMYAFLSRAAKRKEGEMCEQEFNLIGRMKVSSSITILSDGTEVMETSFVLYGFDDNCVEERQTKSHNLEKSKGLSVKMSGVLKGS-----RTFRRRRSM-----RLDVSTSMKDINSRQACEGAG-VEDHFTPNLELAAIVVKEHISPANKNVKVGGWGLKFLNKTGQRHLNASLQTEVPLQCHSHSNSNCSTSIDIIIPASFHGLPRSKTGSPSSLIDRWISGGKCDCGGWDMGCALTILQTKQTEAFCL--------AKTFDIFAEGSKKDLATMKMVNVRDGSYCIPFQSTLSALQSFSIAVAILHAQ 499
LDS++PK IS DE+YLRRCLE I I A+K C S DS +F +K+M++IL SPLFH+ G + S+L DL+ C ++ SPS S+ K + + V N SD V K + +S+ + + S + S ML PH+VFS D+QR++Y ANL K + + K DYMY+F SR +K+ + + + +L+G+MKVS+S T+ + +++MET FVLYG D+NC E T SHNL KSKGLS K+ + + S +TF + + +S+ N+ A GA +E+H PN ELAAIVVK+H+ N ++GGWGLKFL K+G R + S + V + + + +C TS+DI+IPA HG PR+K PSSLI+RWISGG CDCGGWD+GC LTIL+T+ ++A L K+FD+F +GS T++MVNVRDG Y I Q LSALQS SIAVAI+H +
Sbjct: 80 LDSRIPKHLISVDEKYLRRCLELIHINASKAAQCNASMNLSSLRMGILSGCLNPTKIRRRDSYDSASFIFKCPVESGTGGVVVSPAGKWIVGTIMGSKSMMNILKSPLFHQFGVLDGNGNLSGSNLNDLKGSICYDIMDSPSGLRISSQQKPKMEPLVMASLKNGSDTVHKRLVSMSS--LDSTCSVQSSSVSASVSGMLQCTWKGGLPHFVFSVDDQREVYIANLWKAEPADDKAVDYMYSFHSRKGGQKDRGISDSDSHLVGKMKVSASFTLCPESSKIMETQFVLYGGDENCDIETHTSSHNLRKSKGLSKKVVEMFRTSHLPKPKTFSKFGGSGAVHENCSLESSVDKGNNLDALGGANKLENHLLPNFELAAIVVKDHLRD-NHQKEIGGWGLKFLKKSGSRQMIDSPEASVRCESCARNTGDCCTSMDILIPAGLHGGPRTKNCGPSSLIERWISGGHCDCGGWDIGCPLTILKTRSSKAEILPQVETQEECKSFDLFQQGSGHAAPTLRMVNVRDGLYFIHSQPPLSALQSLSIAVAIIHTR 625
Match: D7SZN3 ((Uncharacterized protein {ECO:0000313|EMBL:CBI23712.3}))
HSP 1 Score: 340.502 bits (872), Expect = 2.154e-107
Identity = 203/553 (36.71%), Postives = 305/553 (55.15%), Query Frame = 0
Query: 25 LDSKVPKQFISFDEQYLRRCLEFIQITANKPTTCSLDSDFT-----VFSET----------------------------------------------KNMLDILNSPLFHKLGSTIRD----RSSLVDLRNPKCSSLLCSPSESDSSTSGKSEKDLAVHNDHANVSDHVPKSVGPLSTPFASAAAHLSSFMP----ATSSRWMLHNRGNQKCPHYVFSSDNQRDIYFANLSKVDSPNKKVTDYMYAFLSRAAKRKEGEMCEQEFNLIGRMKVSSSITILSDGTEVMETSFVLYGFDDNCVEERQTKSHNLEKSKGLSVKMSGVLKGSRTFRRRRSMRLDVSTSMKDINSRQACEGAG-----------VEDHFTPNLELAAIVVKEHISPANKNVKVGGWGLKFLNKTGQRHLNASLQTEVPLQCHSHSNSNCSTSIDIIIPASFHGLPRSKTGSPSSLIDRWISGGKCDCGGWDMGCALTILQTKQT-EAFC-------LAKTFDIFAEGSKKDLATMKMVNVRDGSYCIPFQSTLSALQSFSIAVAILHAQ 499
L++++PK +S DE+YLRRCLE I I+A+K C++ + + +FS+T K+M+ IL SPLF + G+ D +SL+D + C+ + SP S +S ++L N + P++V +S + S P AT S+ ML PH+VFS D+QR++Y AN K + P+ K D MY F SR +KE ++ + + +L+G+MKVSSS T+ + +++MET FV +G +N + QT S + K+KGLS K+ V + S + ++R + + +T++ + +S + C+ +E+ PNLELAAIVVK+H+ + +VGGWGLKFL K G + +ASL+ +P +C S +CSTS+DI++PA HG PR++ G PSSLI+RW SGG CDCGGWD+GC LT+L+T+ T E F K+FD+FA+GS+ +++VNV DG Y I F+S LSALQSFSIAVAI+H +
Sbjct: 85 LNNRMPKHIMSLDERYLRRCLELIHISASKAAPCNISLNLSSLKMGIFSDTLNLPKFRGRNTCDMSKLVIECPVATGTGDVVVSPAGQWVVGTLMGSKSMMKILKSPLFRQFGALEDDVKFGGTSLIDAKGAMCTDFISSPG----GLSIRSPQNLPKGNISQGNHRYGPEAVHKRLISTSSTNSTCSDQSPSSGFATVSQGMLQCTWKGGIPHFVFSVDDQREVYVANQWKAELPDDKALDCMYLFHSRTGGQKEHKIPDNKADLVGKMKVSSSFTLCPNDSKIMETEFVFFGGRENYASKMQTSSSIIRKNKGLSKKVVEVFRTSHSSKQRTTSKFGGTTAILENDSWEQCQDTCNNPSALGRTNLLENDLPPNLELAAIVVKDHLPGKRQEAEVGGWGLKFLKKVGLKQNSASLEASLPSECCLRSTGDCSTSMDILVPAGIHGGPRTRNGGPSSLIERWRSGGHCDCGGWDIGCPLTVLKTRATKEEFSHHTDIQEEYKSFDLFAQGSELSAPILRVVNVHDGLYFIHFRSMLSALQSFSIAVAIIHTR 633
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6Z913 | E-Value: 4.548e-131, PID: 38.46 | (Uncharacterized protein {ECO:0000313|EMBL:MPA3956... [more] |
| A0A5B7B7C3 | E-Value: 4.341e-130, PID: 41.00 | (Uncharacterized protein {ECO:0000313|EMBL:MPA6480... [more] |
| A0A5B6Z6C7 | E-Value: 6.409e-128, PID: 38.91 | (Uncharacterized protein {ECO:0000313|EMBL:MPA3956... [more] |
| A0A5B6Z5U0 | E-Value: 9.086e-127, PID: 38.51 | (Uncharacterized protein {ECO:0000313|EMBL:MPA3956... [more] |
| A0A5J5ADG5 | E-Value: 1.577e-118, PID: 38.59 | CCT domain-containing protein {ECO:0000259|PROSITE... [more] |
| A0A5J5C0G5 | E-Value: 9.597e-112, PID: 41.25 | (Uncharacterized protein {ECO:0000313|EMBL:KAA8548... [more] |
| A0A7N2LZ62 | E-Value: 3.590e-111, PID: 38.70 | (Uncharacterized protein {ECO:0000313|EnsemblPlant... [more] |
| A0A2I4DSE6 | E-Value: 3.399e-109, PID: 37.33 | (uncharacterized protein LOC108983015 {ECO:0000313... [more] |
| A0A5N6RBD9 | E-Value: 5.355e-109, PID: 39.16 | (Uncharacterized protein {ECO:0000313|EMBL:KAE8076... [more] |
| D7SZN3 | E-Value: 2.154e-107, PID: 36.71 | (Uncharacterized protein {ECO:0000313|EMBL:CBI2371... [more] |
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |
