XM_017400481.1

Resource Type: 
Polypeptide
Name: 
XM_017400481.1
Identifier: 
XM_017400481.1-protein
Sequence: 
MVWDKANNNKILKVDLKSRLQHVQGKDKLMMSYLSCYSLGRMTQQISSNA
VFNMLKDILLFVIRTSAATSSPFACISNSLNKPTPLKLDIILPSIRDIRW
NFARLLYLFNIRLERNVATFLVVLLVACFSFVMIGGLLFYNFRGSTQSLE
DCFWEAWACLISSSTHLRQRTRVERVIGFILAIWGILFYSRLLSTMTEQF
RHNMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTA
TARRQRILLLSDLPRKQVDKIAENIGKDLNHIDILTKSCSLSMTISFERA
AANKARAIIILPTKGDRYGIDTDAFLSVLALQPLPDMGSVPAIVEVSSSN
TCELLKTISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNL
YNFTNLTGLKYKQIRRGFQEAVVCGIYRRGKVDFHPNDDEVLEQDDKVLF
IAPIPGKKKPYLASPDVISEDVSGIHNLVQVNKNVESLSFAQHMEKLRFE
NIVKRPKKSGSKASDWTVGPKEWILMVGWRPDVVEMINEYDNYLGPGSVL
EILSDVPIEDRNRARDLAGQGKLKNVKVFHRIGNPMDYTTLKETITNIHK
PSTKGGDIPFSIVVISDREWLLGDPSRADKHSAYSLLLAESICNKLGVKV
QNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSDLNEVWK
DILNADGDEIYVKDVGLYMKEGENPSFAELSERAHLRREVAIGYVKNNNK
VINPVSKLEPLSLELNDSLIVISELEGVQPLPLGSES
Sequence Length: 
787
Sequence Checksum: 
41b19e5fbb78f68a3b67dcfe0a8df3a2
View location in JBrowse: 
DCARv2_Chr1:28574108..28588490-
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017400481.1, derives from mRNA, XM_017400481.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017400481.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017400481.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5ABR3 (Castor_Poll_mid domain-containing protein {ECO:0000259|Pfam:PF06241})

HSP 1 Score: 1267.68 bits (3279), Expect = 0.000e+0
Identity = 622/793 (78.44%), Postives = 696/793 (87.77%), Query Frame = 0
 
Query:    1 MVWDKANN--NKILKVDLKSRLQHVQGKDKLMMSYLSCYSLGRMTQQISSNAVFNMLKDILLFVIRTSAATSSPFACISNSLNKPTPLKLDIILPSIRDIRWNFARLLYLFNIRLERNVATFLVVLLVACFSFVMIGGLLFYNFRGSTQSLEDCFWEAWACLISSSTHLRQRTRVERVIGFILAIWGILFYSRLLSTMTEQFRHNMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQVDKIAENIGKDLNHIDILTKSCSLSMTISFERAAANKARAIIILPTKGDRYGIDTDAFLSVLALQPLPDMGSVPAIVEVSSSNTCELLKTISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLYNFTNLTGLKYKQIRRGFQEAVVCGIYRRGKVDFHPNDDEVLEQDDKVLFIAPIPGKKKPYLASPDVISEDVSGIHNLVQVNKNVESLSFAQHMEKLRFENIVKRPKKSGSKASDWTVGPKEWILMVGWRPDVVEMINEYDNYLGPGSVLEILSDVPIEDRNRARDLAGQGKLKNVKVFHRIGNPMDYTTLKETITNIHKPSTKGGDIPFSIVVISDREWLLGDPSRADKHSAYSLLLAESICNKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSDLNEVWKDILNADGDEIYVK--------DVGLYMKEGENPSFAELSERAHLRREVAIGYVKNNNKVINPVSKLEPLSLELNDSLIVISELEGVQPLPL 783
            M W+  +N   K L++DLK   Q    K  LMM+ +S Y L R+ Q  S+N V NM++D+L +VIRT  ATS PFACIS+SL KPTPL+LD+ LPS++D+RW+ ARLLYLFNI+LERNVA FLVVLLVACFSFV+IGG LF+ FRGSTQSLEDCFWEAWACL SSSTHL+QRTRVERV+GF+LAIWGILFYSRLLSTMTEQ R+NMQKLREGAQMQVLETDH+IICGVNSHLTFILKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQ+DKI ENI KDLNHID+LTKSCSLS+T SFERAAANKARAIIILPTKGDRY +DTDAFLSVLALQPLP M SVP IVEVS+ NTCELLK+ISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNL +F NL+G+ Y+Q+RRGFQEAVVCG+YRRGK+ FHP+DDEVLEQ DKVLFIAP+ GK+KP L   +V+SE+ S +HNL  + KN ES + A  + K+R E+IV+RP K GSKASDW+ GPKE +LM+GWRPDVVEMI EYDNYLGPGSVLEILSDVP++DRNRA +LA QGKLKNV+V HRIGNPM+Y  LK TITNI K   KG DIPFSIVVISD+EWLLGDPSRADKHSAYSLLLAE+IC+KLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIA+EEVMSLVTAQVAENS+LNEVWKDILNA+GDEIYVK        D+GLYMK+GENP+FAELSERA+LRREVAIGYVKNN KVINP+ K EPLSLE+ DSLIVISELEG QP+ L
Sbjct:    1 MKWNVLDNCHAKYLRMDLKYSPQGHPAK--LMMASISSYFLPRVMQLSSANTVMNMVQDLLFYVIRTFVATSLPFACISSSLKKPTPLQLDVSLPSLQDVRWSVARLLYLFNIQLERNVAMFLVVLLVACFSFVVIGGFLFFKFRGSTQSLEDCFWEAWACLCSSSTHLKQRTRVERVVGFVLAIWGILFYSRLLSTMTEQCRNNMQKLREGAQMQVLETDHVIICGVNSHLTFILKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQMDKIVENISKDLNHIDVLTKSCSLSLTKSFERAAANKARAIIILPTKGDRYEVDTDAFLSVLALQPLPKMASVPTIVEVSNYNTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCSFPNLSGITYRQLRRGFQEAVVCGLYRRGKIYFHPHDDEVLEQTDKVLFIAPVHGKRKPQLTFSNVVSEENSTVHNLEVLEKNGESPNQALEISKVRLEHIVRRPAKPGSKASDWSQGPKECVLMLGWRPDVVEMIEEYDNYLGPGSVLEILSDVPMDDRNRASNLADQGKLKNVQVSHRIGNPMNYDILKGTITNIQKSFKKGKDIPFSIVVISDKEWLLGDPSRADKHSAYSLLLAENICDKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIASEEVMSLVTAQVAENSELNEVWKDILNAEGDEIYVKIKLEKRFMDIGLYMKKGENPAFAELSERAYLRREVAIGYVKNNKKVINPIPKSEPLSLEVTDSLIVISELEGEQPILL 791
[Close]
BLAST of XM_017400481.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7AY23 ((Putative ion channel POLLUX-like 2 {ECO:0000313|EMBL:MPA61025.1}))

HSP 1 Score: 1259.2 bits (3257), Expect = 0.000e+0
Identity = 619/775 (79.87%), Postives = 688/775 (88.77%), Query Frame = 0
 
Query:   10 KILKVDLK-SRLQHVQGKDKLMMSYLSCYSLGRMTQQISSNAVFNMLKDILLFVIRTSAATSSPFACISNSLNKPTPLKLDIILPSIRDIRWNFARLLYLFNIRLERNVATFLVVLLVACFSFVMIGGLLFYNFRGSTQSLEDCFWEAWACLISSSTHLRQRTRVERVIGFILAIWGILFYSRLLSTMTEQFRHNMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQVDKIAENIGKDLNHIDILTKSCSLSMTISFERAAANKARAIIILPTKGDRYGIDTDAFLSVLALQPLPDMGSVPAIVEVSSSNTCELLKTISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLYNFTNLTGLKYKQIRRGFQEAVVCGIYRRGKVDFHPNDDEVLEQDDKVLFIAPIPGKKKPYLASPDVISEDVSGIHNLVQVNKNVESLSFAQHMEKLRFENIVKRPKKSGSKASDWTVGPKEWILMVGWRPDVVEMINEYDNYLGPGSVLEILSDVPIEDRNRARDLAGQGKLKNVKVFHRIGNPMDYTTLKETITNIHKPSTKGGDIPFSIVVISDREWLLGDPSRADKHSAYSLLLAESICNKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSDLNEVWKDILNADGDEIYVKDVGLYMKEGENPSFAELSERAHLRREVAIGYVKNNNKVINPVSKLEPLSLELNDSLIVISELEGVQPLPL 783
            K LK+DLK S   H     KLM++ +S Y L R+ Q  S+N V NM++D+LL+VIRTSA TS  F+C+S+SLNKPTPL+LD+ LPS++D+RW+FARLLYLFNI+LERNVATFLVVLLVACFSFV+IGG LF+ FRGSTQSLEDC WEAWACL SSSTHL+QRTRVERV+GF+LAIWGILFYSRLLSTMTEQFR+NMQKLREGAQMQVLETDHIIICGVNSHL FILKQLNKYHEFAVRLGTATARRQRILLLSD+PRKQ+DKIA+NI KDLNHID+LTKSCSLS+T SFERAAANKARAIIILPTKGDRY +DTDAFLSVLALQP+P M SVP IVEVS+ NTCELLK+ISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNL +F NL G KY+ +RRGFQEAVVCG+YRRGK+ FHPNDDEVLEQ DKVLFIAP+ GK+KP +   +V+SE+ S IHNL  + KN ES + A  ++K+R ENIV+RP K GSKASDW+ GPKE ILM+GWRPDVVEMI EYDNYLGPGSVLEILSDVP++DRNRA      GKLKN++V HRIGNPM+Y  LK TI NI K   KG DIP SIVVISDREWLLGDPSRADKHSAYSLLLAE+IC+KLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIA+EEVMSLVTAQVAENS+LNEVWKDILNA+GDEIYVKD+GLYMK GENPSFAELSERA+LRREVAIGYVKNN KVINP+ K EPLSLE+ DSLIVISELEG QP+ L
Sbjct:   80 KYLKMDLKYSPWGH---PAKLMIASMSSYFLLRVMQLSSANTVMNMVQDLLLYVIRTSADTSLRFSCMSSSLNKPTPLQLDVSLPSLQDVRWSFARLLYLFNIQLERNVATFLVVLLVACFSFVVIGGFLFFKFRGSTQSLEDCLWEAWACLCSSSTHLKQRTRVERVVGFVLAIWGILFYSRLLSTMTEQFRNNMQKLREGAQMQVLETDHIIICGVNSHLAFILKQLNKYHEFAVRLGTATARRQRILLLSDIPRKQMDKIADNIAKDLNHIDVLTKSCSLSLTKSFERAAANKARAIIILPTKGDRYEVDTDAFLSVLALQPIPKMASVPTIVEVSNFNTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCSFPNLAGTKYRHLRRGFQEAVVCGLYRRGKIYFHPNDDEVLEQTDKVLFIAPVHGKRKPQIGFSNVVSEENSTIHNLEVLEKNGESPNHALEIKKVRLENIVRRPTKPGSKASDWSQGPKECILMLGWRPDVVEMIEEYDNYLGPGSVLEILSDVPMDDRNRA------GKLKNIQVSHRIGNPMNYDILKGTIMNIQKSFKKGKDIPLSIVVISDREWLLGDPSRADKHSAYSLLLAENICDKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIASEEVMSLVTAQVAENSELNEVWKDILNAEGDEIYVKDIGLYMKNGENPSFAELSERAYLRREVAIGYVKNNKKVINPIPKSEPLSLEVTDSLIVISELEGEQPIFL 845
[Close]
BLAST of XM_017400481.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7B0R4 (Castor_Poll_mid domain-containing protein {ECO:0000259|Pfam:PF06241} (Fragment))

HSP 1 Score: 1257.28 bits (3252), Expect = 0.000e+0
Identity = 620/775 (80.00%), Postives = 687/775 (88.65%), Query Frame = 0
 
Query:   10 KILKVDLK-SRLQHVQGKDKLMMSYLSCYSLGRMTQQISSNAVFNMLKDILLFVIRTSAATSSPFACISNSLNKPTPLKLDIILPSIRDIRWNFARLLYLFNIRLERNVATFLVVLLVACFSFVMIGGLLFYNFRGSTQSLEDCFWEAWACLISSSTHLRQRTRVERVIGFILAIWGILFYSRLLSTMTEQFRHNMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQVDKIAENIGKDLNHIDILTKSCSLSMTISFERAAANKARAIIILPTKGDRYGIDTDAFLSVLALQPLPDMGSVPAIVEVSSSNTCELLKTISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLYNFTNLTGLKYKQIRRGFQEAVVCGIYRRGKVDFHPNDDEVLEQDDKVLFIAPIPGKKKPYLASPDVISEDVSGIHNLVQVNKNVESLSFAQHMEKLRFENIVKRPKKSGSKASDWTVGPKEWILMVGWRPDVVEMINEYDNYLGPGSVLEILSDVPIEDRNRARDLAGQGKLKNVKVFHRIGNPMDYTTLKETITNIHKPSTKGGDIPFSIVVISDREWLLGDPSRADKHSAYSLLLAESICNKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSDLNEVWKDILNADGDEIYVKDVGLYMKEGENPSFAELSERAHLRREVAIGYVKNNNKVINPVSKLEPLSLELNDSLIVISELEGVQPLPL 783
            K LK+DLK S   H     KLM++ +S Y L R+ Q  S+N V NM++D+LL+VIRTSA TS  F+C+S+SLNKPTPL+LD+ LPS++D+RW+FARLLYLFNI+LERNVATFLVVLLVACFSFV+IGG LF+ FRGSTQSLEDC WEAWACL SSSTHL+QRTRVERV+GF+LAIWGILFYSRLLSTMTEQFR+NMQKLREGAQMQVLETDHIIICGVNSHL FILKQLNKYHEFAVRLGTATARRQRILLLSD+PRKQ+DKIA+NI KDLNHID+LTKSCSLS+T SFERAAANKARAIIILPTKGDRY +DTDAFLSVLALQPL  M SVP IVEVS+ NTCELLK+ISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNL +F NL G KY+ +RRGFQEAVVCG+YRRGK+ FHPNDDEVLEQ DKVLFIAP+ GK+KP L   +V+SE+ S IHNL  + KN ES + A  ++K+R ENIV+RP K GSKASDW+ GPKE ILM+GWRPDVVEMI EYDNYLGPGSVLEILSDVP++DRNRA      GKLKN++V HRIGNPM+Y  LK TI NI K   KG DIP SIVVISDREWLLGDPSRADKHSAYSLLLAE+IC+KLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIA+EEVMSLVTAQVAENS+LNEVWKDILNA+GDEIYVKD+GLYMK GENPSFAELSERA+LRREVAIGYVKNN KVINP+ K EPLSLE+ DSLIVISELEG QP+ L
Sbjct:   72 KYLKMDLKYSPWGH---PAKLMIASMSSYFLLRVMQLSSANTVMNMVQDLLLYVIRTSADTSLRFSCMSSSLNKPTPLQLDVSLPSLQDVRWSFARLLYLFNIQLERNVATFLVVLLVACFSFVVIGGFLFFKFRGSTQSLEDCLWEAWACLCSSSTHLKQRTRVERVVGFVLAIWGILFYSRLLSTMTEQFRNNMQKLREGAQMQVLETDHIIICGVNSHLAFILKQLNKYHEFAVRLGTATARRQRILLLSDIPRKQMDKIADNIAKDLNHIDVLTKSCSLSLTKSFERAAANKARAIIILPTKGDRYEVDTDAFLSVLALQPLQKMASVPTIVEVSNFNTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCSFPNLAGTKYRHLRRGFQEAVVCGLYRRGKIYFHPNDDEVLEQTDKVLFIAPVHGKRKPRLGFSNVVSEENSTIHNLEVLEKNGESPNHALEIKKVRLENIVRRPTKPGSKASDWSQGPKECILMLGWRPDVVEMIEEYDNYLGPGSVLEILSDVPMDDRNRA------GKLKNIQVSHRIGNPMNYDILKGTIMNIQKSFKKGKDIPLSIVVISDREWLLGDPSRADKHSAYSLLLAENICDKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIASEEVMSLVTAQVAENSELNEVWKDILNAEGDEIYVKDIGLYMKNGENPSFAELSERAYLRREVAIGYVKNNKKVINPIPKSEPLSLEVTDSLIVISELEGEQPIFL 837
[Close]
BLAST of XM_017400481.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5C488 (Castor_Poll_mid domain-containing protein {ECO:0000259|Pfam:PF06241})

HSP 1 Score: 1247.65 bits (3227), Expect = 0.000e+0
Identity = 601/756 (79.50%), Postives = 678/756 (89.68%), Query Frame = 0
 
Query:   28 KLMMSYLSCYSLGRMTQQISSNAVFNMLKDILLFVIRTSAATSSPFACISNSLNKPTPLKLDIILPSIRDIRWNFARLLYLFNIRLERNVATFLVVLLVACFSFVMIGGLLFYNFRGSTQSLEDCFWEAWACLISSSTHLRQRTRVERVIGFILAIWGILFYSRLLSTMTEQFRHNMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQVDKIAENIGKDLNHIDILTKSCSLSMTISFERAAANKARAIIILPTKGDRYGIDTDAFLSVLALQPLPDMGSVPAIVEVSSSNTCELLKTISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLYNFTNLTGLKYKQIRRGFQEAVVCGIYRRGKVDFHPNDDEVLEQDDKVLFIAPIPGKKKPYLASPDVISEDVSGIHNLVQVNKNVESLSFAQHMEKLRFENIVKRPKKSGSKASDWTVGPKEWILMVGWRPDVVEMINEYDNYLGPGSVLEILSDVPIEDRNRARDLAGQGKLKNVKVFHRIGNPMDYTTLKETITNIHKPSTKGGDIPFSIVVISDREWLLGDPSRADKHSAYSLLLAESICNKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSDLNEVWKDILNADGDEIYVKDVGLYMKEGENPSFAELSERAHLRREVAIGYVKNNNKVINPVSKLEPLSLELNDSLIVISELEGVQPLPL 783
            KLM++ +S Y L R+ Q  S+N + NM++D+L +VIRT  ATS PFAC+S+SLNKPTPL LD+ LPS++D+RW+FAR+LYLFNI+LERNVATF VVLLVACFSFV+IGG LF+  RGSTQSLEDCFWEAWACL SSSTHL+QRTRVERVIGF+LAIWGILFYSR+LSTMTEQFR+NMQKLREGAQMQVLE+DHIIICGVNSHL FILKQL+KYHEFAVRLGTATARRQRILLLSDLPRKQ+DKIA+N+ KDLNHID+LTKSCSLS+T SFERAAA+KARAIIILPTKGDRY +DTDAFLSVLALQPLP M SVP IVEVSSS TCELLK+ISGLKVEPVENVASKLFVQCSRQKGLIKIY+HLLNY+KNVFNL +F NL G+KY+Q+RRGFQEAVVCG+YRRGK+ FHPNDDEVLE+ DKVLFIAP+ GKKKP LA  +V+ +  S I NL  + KN ES + A  + K+R ENIVKRP K GSKASDW+ GPKE ILM+GWRPDV+EMI EYDNYLGPGSVLEILSDVP++DRN+A +LAG+GKLKNV+V HRIGNPM+Y  LKETIT+I K   KG D+P S+VVISDREWLL DPSR DKHSAYSLLLAE IC+KLGVKVQNLVAEIVDSKLGKQI+RIKPSLTYIAAEEVM LVTAQV EN++LNEVWKDILNA+GDEIYVKD+GLYMK+G+NPSFAEL+ERA+LRREVAIGYVKNN KVINP+ K EPLSLEL DSLIVISELEG QP+ L
Sbjct:   85 KLMITSMSSYFLLRVMQLNSANKLMNMVQDLLFYVIRTFVATSLPFACMSSSLNKPTPLHLDVSLPSLQDVRWSFARVLYLFNIQLERNVATFFVVLLVACFSFVIIGGFLFFKIRGSTQSLEDCFWEAWACLCSSSTHLKQRTRVERVIGFVLAIWGILFYSRVLSTMTEQFRNNMQKLREGAQMQVLESDHIIICGVNSHLNFILKQLDKYHEFAVRLGTATARRQRILLLSDLPRKQMDKIADNLAKDLNHIDVLTKSCSLSLTKSFERAAASKARAIIILPTKGDRYEVDTDAFLSVLALQPLPKMASVPTIVEVSSSKTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYKHLLNYQKNVFNLCSFPNLAGIKYRQLRRGFQEAVVCGLYRRGKIYFHPNDDEVLEETDKVLFIAPVHGKKKPQLAFSNVVKDQNSTIQNLEVLEKNGESPNHALEIRKVRLENIVKRPTKPGSKASDWSQGPKECILMLGWRPDVLEMIEEYDNYLGPGSVLEILSDVPMDDRNKANNLAGRGKLKNVRVLHRIGNPMNYDILKETITSILKAFKKGEDLPLSVVVISDREWLLRDPSRVDKHSAYSLLLAECICDKLGVKVQNLVAEIVDSKLGKQISRIKPSLTYIAAEEVMGLVTAQVVENNELNEVWKDILNAEGDEIYVKDIGLYMKKGDNPSFAELTERAYLRREVAIGYVKNNKKVINPIPKSEPLSLELTDSLIVISELEGEQPIIL 840
[Close]
BLAST of XM_017400481.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q3H0 ((Ion channel POLLUX-like {ECO:0000313|EMBL:PSS01409.1}))

HSP 1 Score: 1216.06 bits (3145), Expect = 0.000e+0
Identity = 593/754 (78.65%), Postives = 662/754 (87.80%), Query Frame = 0
 
Query:   28 KLMMSYLSCYSLGRMTQQISSNAVFNMLKDILLFVIRTSAATSSPFACISNSLNKPTPLKLDIILPSIRDIRWNFARLLYLFNIRLERNVATFLVVLLVACFSFVMIGGLLFYNFRGSTQSLEDCFWEAWACLISSSTHLRQRTRVERVIGFILAIWGILFYSRLLSTMTEQFRHNMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQVDKIAENIGKDLNHIDILTKSCSLSMTISFERAAANKARAIIILPTKGDRYGIDTDAFLSVLALQPLPDMGSVPAIVEVSSSNTCELLKTISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLYNFTNLTGLKYKQIRRGFQEAVVCGIYRRGKVDFHPNDDEVLEQDDKVLFIAPIPGKKKPYLASPDVISEDVSGIHNLVQVNKNVESLSFAQHMEKLRFENIVKRPKKSGSKASDWTVGPKEWILMVGWRPDVVEMINEYDNYLGPGSVLEILSDVPIEDRNRARDLAGQGKLKNVKVFHRIGNPMDYTTLKETITNIHKPSTKGGDIPFSIVVISDREWLLGDPSRADKHSAYSLLLAESICNKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSDLNEVWKDILNADGDEIYVKDVGLYMKEGENPSFAELSERAHLRREVAIGYVKNNNKVINPVSKLEPLSLELNDSLIVISELEGVQPL 781
            KL+++ +SC  L RM      + +  + +D+L     +SA TSSPFACIS+SL KPTPL+LD+ LP + DIRW+FARLLYLFN++LERNVATF VVLL +CFSFV+IGG LF+ FRGSTQSLEDC WEAWACL SSSTHL+QRTRVERV+GF+LAIWGILFYSRLLSTMTEQFR+NMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTATAR+QRILLLSDLPRKQ+DK+A+NI KDLNHID+LTKSCSLS+T SFERAAA+KARAIIILPTK DRY +DT+AFLSVLALQPLP M SVP IVEVS+ NTCELLK+ISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNL NF NL  L Y ++RRGFQEAVVCG+YR GK+ FHPNDDEVL++ DKVLFIAP+ GKKKP LA P+V+ E+     NL  V KN +S + A  M K+R +NIVKRP KSGSKASDW++G KE +LM+GWRPD+V+MI EYDNYLGPGSVLEILSDVP++DRNRA +LAGQ KLKNV+V HRIGNPMDY  LKETITNI     K  DIP SIVV SDREWLLGDPSRADKHSAYSLLLAE+ICNKLGVKVQ+LVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENS+LNEVWKDILNA+GDEIYVKD+G YMKEGE PSFAELSERA+LRREVAIGY+K+N KVINP+ K EPLSLE  DSLIVISELEG QP+
Sbjct:   98 KLLIASVSCNLLLRMMPINVLSRLIKVPQDVLF----SSAVTSSPFACISSSLGKPTPLRLDVSLPPLEDIRWSFARLLYLFNMQLERNVATFFVVLLASCFSFVLIGGFLFFKFRGSTQSLEDCLWEAWACLCSSSTHLKQRTRVERVLGFVLAIWGILFYSRLLSTMTEQFRNNMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTATARKQRILLLSDLPRKQMDKVADNIAKDLNHIDVLTKSCSLSLTKSFERAAASKARAIIILPTKADRYEVDTNAFLSVLALQPLPHMASVPTIVEVSNLNTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLCNFPNLAELTYCELRRGFQEAVVCGLYRGGKIYFHPNDDEVLQKTDKVLFIAPVHGKKKPQLAYPNVVGEENMIADNLGVVEKNADSPNPALEMIKMRLQNIVKRPSKSGSKASDWSLGSKECVLMLGWRPDIVQMIEEYDNYLGPGSVLEILSDVPLDDRNRASNLAGQSKLKNVRVSHRIGNPMDYDFLKETITNIQNSLIKDEDIPLSIVVTSDREWLLGDPSRADKHSAYSLLLAENICNKLGVKVQHLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSELNEVWKDILNAEGDEIYVKDIGFYMKEGEKPSFAELSERAYLRREVAIGYMKDNKKVINPMPKSEPLSLEQTDSLIVISELEGEQPV 847
[Close]
BLAST of XM_017400481.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6WS79 ((putative ion channel POLLUX-like 2 isoform X3 {ECO:0000313|RefSeq:XP_027116407.1}))

HSP 1 Score: 1204.5 bits (3115), Expect = 0.000e+0
Identity = 585/778 (75.19%), Postives = 673/778 (86.50%), Query Frame = 0
 
Query:    8 NNKILKVDLKSRLQHVQGKD-KLMMSYLSCYSLGRMTQQISSNAVFNMLKDILLFVIRTSAATSSPFACISNSLNKPTPLKLDIILPSIRDIRWNFARLLYLFNIRLERNVATFLVVLLVACFSFVMIGGLLFYNFRGSTQSLEDCFWEAWACLISSSTHLRQRTRVERVIGFILAIWGILFYSRLLSTMTEQFRHNMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQVDKIAENIGKDLNHIDILTKSCSLSMTISFERAAANKARAIIILPTKGDRYGIDTDAFLSVLALQPLPDMGSVPAIVEVSSSNTCELLKTISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLYNFTNLTGLKYKQIRRGFQEAVVCGIYRRGKVDFHPNDDEVLEQDDKVLFIAPIPGKKKPYLASPDVISEDVSGIHNLVQVNKNVESLSFAQHMEKLRFENIVKRPKKSGSKASDWTVGPKEWILMVGWRPDVVEMINEYDNYLGPGSVLEILSDVPIEDRNRARDLAGQGKLKNVKVFHRIGNPMDYTTLKETITNIHKPSTKGGDIPFSIVVISDREWLLGDPSRADKHSAYSLLLAESICNKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSDLNEVWKDILNADGDEIYVKDVGLYMKEGENPSFAELSERAHLRREVAIGYVKNNNKVINPVSKLEPLSLELNDSLIVISELEGVQPLPLG 784
            +++  K +++S  Q VQGK  KL++++++ +SL R+ + +S++   N ++ +  ++I T    SSPFAC+SNS++KPTPL+LD+ LP  RDIRWN +RL+YLFN++LERNVATF VVLL++C SFV+IGGLLFYN RGS QSLE+CFWEAWACL SSSTHL+QRTR+ER+IGF+LAIWGILFYSRLLSTMTEQFR  MQ LREGAQMQVLETDHIIICG+NSHLTFILKQLNKYHEFAVRLGTA ARRQRILLLSDLPRKQ+DKIA+NI KDLNHID+L+KSCSLS+T SFERAAANKARAIIILPTKGDRY +DTDAFLSVLALQPL +M SVP IVEVSSSNTCELLK+ISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNL+   +L GLKY+Q+R GFQEAVVCG+YR GK+ FHPNDDEVL Q+DKVLFI+PI GKKKP LA    + ED + + +     K+  SLS A  + K R   I KR  KSGSKASDW++GPKE ILM+GWRPDVVEMI EYDNYLGPGSVLE+LSDVP++DRN+A  LAGQGKLK+V+V HRIGNPMDY TLK+TITNI K   K  DIPFSIVVISDREWLLG+P++ADKHSAYSLLLAE+ICNK GV V NLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAEN++LNEVWKDILNA+GDEIYVKD+ LYM+ GENPSFAEL+ERA+LR EVAIGY+KNN KVINPV K EPLSL+L D LIVISE+EG QP+ L 
Sbjct:   72 SDRFSKTEIQSIFQLVQGKHAKLILAFMTSFSLARLIEFLSNSVKLNAIQQLFFYMICTYPVKSSPFACMSNSMSKPTPLQLDVSLPPFRDIRWNLSRLIYLFNMQLERNVATFFVVLLISCISFVIIGGLLFYNSRGSKQSLEECFWEAWACLCSSSTHLKQRTRIERIIGFVLAIWGILFYSRLLSTMTEQFRGKMQTLREGAQMQVLETDHIIICGINSHLTFILKQLNKYHEFAVRLGTANARRQRILLLSDLPRKQIDKIADNIAKDLNHIDVLSKSCSLSLTKSFERAAANKARAIIILPTKGDRYEVDTDAFLSVLALQPLQEMASVPTIVEVSSSNTCELLKSISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLHCLPDLVGLKYRQLRCGFQEAVVCGLYRNGKIHFHPNDDEVLLQNDKVLFISPIHGKKKPRLAISSGLDEDDNTLPDPETHKKDGRSLSQAFEITKARLGKIAKR-SKSGSKASDWSLGPKECILMLGWRPDVVEMIKEYDNYLGPGSVLEVLSDVPMDDRNKASKLAGQGKLKHVRVSHRIGNPMDYDTLKDTITNIWKSFKKDEDIPFSIVVISDREWLLGEPAKADKHSAYSLLLAETICNKFGVNVHNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENNELNEVWKDILNAEGDEIYVKDISLYMQRGENPSFAELAERANLRGEVAIGYMKNNKKVINPVPKSEPLSLQLIDHLIVISEMEGEQPIALS 848
[Close]
BLAST of XM_017400481.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9TVL6 ((putative ion channel POLLUX-like 2 isoform X1 {ECO:0000313|RefSeq:XP_011091105.1}))

HSP 1 Score: 1201.04 bits (3106), Expect = 0.000e+0
Identity = 584/774 (75.45%), Postives = 674/774 (87.08%), Query Frame = 0
 
Query:    9 NKILKVDLKSRLQHVQG-KDKLMMSYLSCYSLGRMTQQISSNAVFNMLKDILLFVIRTSAATSSPFACISNSLNKPTPLKLDIILPSIRDIRWNFARLLYLFNIRLERNVATFLVVLLVACFSFVMIGGLLFYNFRGSTQSLEDCFWEAWACLISSSTHLRQRTRVERVIGFILAIWGILFYSRLLSTMTEQFRHNMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQVDKIAENIGKDLNHIDILTKSCSLSMTISFERAAANKARAIIILPTKGDRYGIDTDAFLSVLALQPLPDMGSVPAIVEVSSSNTCELLKTISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLYNFTNLTGLKYKQIRRGFQEAVVCGIYRRGKVDFHPNDDEVLEQDDKVLFIAPIPGKKKPYLASPDVISEDVSGIHNLVQVNKNVESLSFAQHMEKLRFENIVKRPKKSGSKASDWTVGPKEWILMVGWRPDVVEMINEYDNYLGPGSVLEILSDVPIEDRNRARDLAGQGKLKNVKVFHRIGNPMDYTTLKETITNIHKPSTKGGDIPFSIVVISDREWLLGDPSRADKHSAYSLLLAESICNKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSDLNEVWKDILNADGDEIYVKDVGLYMKEGENPSFAELSERAHLRREVAIGYVKNNNKVINPVSKLEPLSLELNDSLIVISELEGVQPL 781
            N +  VDLK+  Q VQ    KL+M+ LS Y + R+    S+NA  N++++   + +RT AA+S PFAC+SNSL+KPTPL+LD+ LPS +D+RW+FARL+YLFNI+LERNVATF +VLL ACFSFV+IGG LF+ FRGSTQSLEDCFWEAWACL SSSTHL+QRTR+ERVIGF+LAIWGILFYSRLLSTMTEQFR+NM +LREGAQ+QVLETDHIIICGVN+ L+F+LKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQ+DK+A+NI KDLNHIDILTKSCSLS+T SFERAAANKARAIIILPTK DRY ID+DAFLSVLALQPLP M SVP IVEVSSSNT +LLK+ISGLKVEPVENV SKLFVQCSRQKGLIKIY+HLLNYRKNVFNL +F +L GL Y+Q+RRGFQEAVVCG+YR GK+ FHPND+EVL++ DKVLFIAP+ GKKKP L+ P  + +  + I++L  + +N E L+ A  + + R ENIVKRPK+SGSKASD +VGPKE IL++GWRPDVVEMI EYDNYLGPGSVLEILSDVP+++R +A  LA QGKLKNV+V HR+GNPM+Y TL++TI NI +   K  D PFSI VISD+EW +GDPSRADK+SAYSLLLAESIC KLGVKV NLVAEIVDSKLGKQITRI+PSLTYIAAEEVMSLVTAQVAENS+LNEVW+D+LNA+GDEIYVKD+GLYMK GENPSF ELSERA+LRREVAIGYVKNN KVINPV K EPLSLE  D+LIVISELEG QP+
Sbjct:   77 NSLPTVDLKNSPQPVQDWGAKLLMASLSSYFIVRLIHINSTNAAMNVVQESFHYAVRTFAASSLPFACMSNSLSKPTPLQLDVSLPSFQDVRWSFARLIYLFNIQLERNVATFFIVLLAACFSFVIIGGFLFFKFRGSTQSLEDCFWEAWACLCSSSTHLKQRTRIERVIGFVLAIWGILFYSRLLSTMTEQFRNNMHRLREGAQVQVLETDHIIICGVNNRLSFVLKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQMDKLADNIAKDLNHIDILTKSCSLSLTKSFERAAANKARAIIILPTKEDRYEIDSDAFLSVLALQPLPLMASVPTIVEVSSSNTRDLLKSISGLKVEPVENVTSKLFVQCSRQKGLIKIYKHLLNYRKNVFNLCSFPHLAGLGYRQLRRGFQEAVVCGLYRDGKIYFHPNDEEVLKETDKVLFIAPVHGKKKPLLSYPHDVQDSDNSINSLETLKQNSEFLNQALDVTRKRLENIVKRPKRSGSKASDGSVGPKECILVLGWRPDVVEMIQEYDNYLGPGSVLEILSDVPLDERYKACKLASQGKLKNVQVSHRVGNPMEYDTLEDTIINIQRSFKKEEDCPFSIAVISDKEWQVGDPSRADKNSAYSLLLAESICGKLGVKVHNLVAEIVDSKLGKQITRIRPSLTYIAAEEVMSLVTAQVAENSELNEVWQDVLNAEGDEIYVKDIGLYMKRGENPSFNELSERANLRREVAIGYVKNNKKVINPVPKSEPLSLEATDALIVISELEGEQPV 850
[Close]
BLAST of XM_017400481.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5C7IRY0 (Castor_Poll_mid domain-containing protein {ECO:0000259|Pfam:PF06241})

HSP 1 Score: 1200.27 bits (3104), Expect = 0.000e+0
Identity = 582/774 (75.19%), Postives = 667/774 (86.18%), Query Frame = 0
 
Query:    8 NNKILKVDLKSRLQHVQGKDKLMMSYLSCYSLGRMTQQISSNAVFNMLKDILLFVIRTSAATSSPFACISNSLNKPTPLKLDIILPSIRDIRWNFARLLYLFNIRLERNVATFLVVLLVACFSFVMIGGLLFYNFRGSTQSLEDCFWEAWACLISSSTHLRQRTRVERVIGFILAIWGILFYSRLLSTMTEQFRHNMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQVDKIAENIGKDLNHIDILTKSCSLSMTISFERAAANKARAIIILPTKGDRYGIDTDAFLSVLALQPLPDMGSVPAIVEVSSSNTCELLKTISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLYNFTNLTGLKYKQIRRGFQEAVVCGIYRRGKVDFHPNDDEVLEQDDKVLFIAPIPGKKKPYLASPDVISEDVSGIHNLVQVNKNVESLSFAQHMEKLRFENIVKRPKKSGSKASDWTVGPKEWILMVGWRPDVVEMINEYDNYLGPGSVLEILSDVPIEDRNRARDLAGQGKLKNVKVFHRIGNPMDYTTLKETITNIHKPSTKGGDIPFSIVVISDREWLLGDPSRADKHSAYSLLLAESICNKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSDLNEVWKDILNADGDEIYVKDVGLYMKEGENPSFAELSERAHLRREVAIGYVKNNNKVINPVSKLEPLSLELNDSLIVISELEGVQPL 781
            N+K  K+D     Q  Q K  L+++ LS Y L R TQ    N    +++ +L  VI+T  AT SPFAC+SNSLNKP PLKLD+ LPS++D+RW+FARL+YLFN++LERNVATFL+VLLVACFSFV+IGG LF+ FR STQSLEDC WEAWACL SSSTHL+QRTR+ERVIGFILAIWGILFYSRLLSTMTEQFR+NMQ+LR+GAQMQV+ETDHIIICGVNSHL FILKQLNKYHEFAVRLGTATARRQRILL+SDLPRKQ+DK+A+NI KDLNHID+LTKSCSLS+T SFERAAA+KARAIIILPT+ DRY +DTDAFLSVLALQP+P M SVP IVEVS S+TCELLK+ISGLKVEPVENVASKLFVQCSRQ+GL+KIYRHLLNY+KNVFNL +F NL G+ Y+Q+RRGFQEAVVCG+YR GK+ FHPNDDE+++Q DK+LFIAP+ GKK P++A P  + +  + I +L  V  N +S + A  + K R E IVKRP KSGSKASDWT GPKE IL++GWRPDVVEMI EY+NYLGPGSVLEILSDVP++DR RA +  GQGKLKNV+V H+IGNPMDY TLKETI NI      G D+P SIVVISDREWLLGDPSRADKHSAYSL+LAE+IC+KLGVKVQNLVAEIVDSKLGKQITR KPSLTYIAAEE+MSLVTAQVAENS+LNEVWKDILN++GDEIYVKD+ LYMKEGENPSFAEL+ERA+LRREVAIGYVK+  KVINP  K EPLSL+  D LIVISELEG QP+
Sbjct:   80 NSKFFKLDQNDSSQGYQAK--LLITSLSSYLLLRFTQVNFVNTFKKIVQGLLPSVIQTFGATGSPFACMSNSLNKPVPLKLDVSLPSLQDVRWSFARLMYLFNMQLERNVATFLIVLLVACFSFVLIGGFLFFKFRDSTQSLEDCLWEAWACLCSSSTHLKQRTRIERVIGFILAIWGILFYSRLLSTMTEQFRNNMQRLRDGAQMQVMETDHIIICGVNSHLNFILKQLNKYHEFAVRLGTATARRQRILLMSDLPRKQIDKLADNIAKDLNHIDVLTKSCSLSLTKSFERAAASKARAIIILPTQTDRYEVDTDAFLSVLALQPIPKMESVPTIVEVSKSSTCELLKSISGLKVEPVENVASKLFVQCSRQQGLVKIYRHLLNYQKNVFNLCSFPNLAGITYRQLRRGFQEAVVCGLYRNGKIYFHPNDDEIVQQPDKILFIAPVHGKKNPHIAYPTTV-KGTNNIQDLEIVKNNGDSPNHALELRKTRLEIIVKRPNKSGSKASDWTSGPKECILLLGWRPDVVEMIEEYNNYLGPGSVLEILSDVPLDDRKRASNAVGQGKLKNVRVSHKIGNPMDYETLKETIVNIQNSFNVGEDMPLSIVVISDREWLLGDPSRADKHSAYSLILAENICSKLGVKVQNLVAEIVDSKLGKQITRNKPSLTYIAAEEIMSLVTAQVAENSELNEVWKDILNSEGDEIYVKDISLYMKEGENPSFAELAERAYLRREVAIGYVKDKKKVINPNPKSEPLSLKSTDLLIVISELEGEQPI 850
[Close]
BLAST of XM_017400481.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P3YWF3 ((putative ion channel POLLUX-like 2 {ECO:0000313|RefSeq:XP_015868681.1}))

HSP 1 Score: 1198.73 bits (3100), Expect = 0.000e+0
Identity = 583/772 (75.52%), Postives = 670/772 (86.79%), Query Frame = 0
 
Query:   10 KILKVDLKSRLQHVQGKDKLMMSYLSCYSLGRMTQQISSNAVFNMLKDILLFVIRTSAATSSPFACISNSLNKPTPLKLDIILPSIRDIRWNFARLLYLFNIRLERNVATFLVVLLVACFSFVMIGGLLFYNFRGSTQSLEDCFWEAWACLISSSTHLRQRTRVERVIGFILAIWGILFYSRLLSTMTEQFRHNMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQVDKIAENIGKDLNHIDILTKSCSLSMTISFERAAANKARAIIILPTKGDRYGIDTDAFLSVLALQPLPDMGSVPAIVEVSSSNTCELLKTISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLYNFTNLTGLKYKQIRRGFQEAVVCGIYRRGKVDFHPNDDEVLEQDDKVLFIAPIPGKKKPYLASPDVISEDVSGIHNLVQVNKNVESLSFAQHMEKLRFENIVKRPKKSGSKASDWTVGPKEWILMVGWRPDVVEMINEYDNYLGPGSVLEILSDVPIEDRNRARDLAGQGKLKNVKVFHRIGNPMDYTTLKETITNIHKPSTKGGDIPFSIVVISDREWLLGDPSRADKHSAYSLLLAESICNKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSDLNEVWKDILNADGDEIYVKDVGLYMKEGENPSFAELSERAHLRREVAIGYVKNNNKVINPVSKLEPLSLELNDSLIVISELEGVQPL 781
            +  K+D  S  Q  Q +  +MM+ +  Y L R+T+    ++   M++++L  V+++  A+S PFA ISNSLNK TPLKLD+ LPS +DIRW+FARLLYLFNI+LERNVATFLVVLL ACFSFV+IGG LF+ FR  TQSLEDC WEAWACL SSSTHL+QRTRVERVIGF+LAIWGILFYSRLLSTMTEQFR+NMQKLREGAQMQVLE+DHIIICGVNSHL FILKQLNKYHEFAVRLGTATARRQRILL+SDLPRKQ+DKIAENI KDLNHIDILTKSCSL++T S+ERAA++KAR+IIILPTKGDRY +DTDAFLSVLALQP+ +M SVP IVEVSS NTC+LLK+ISGLKV+PVENVASKLFVQCSRQKGL+KIYRHLLNYRKNVFNL NF NL G+KY+Q RRGFQEAVVCGIYR GK+ FHP+D+E+L+Q+DKVLFIAPI  +KKP +   + IS+      N   + +N E+ S A  ++K R ENIV+RP KSGSKASDWT+GPKE+IL++GWRPD+VEMI EYDNYLGPGSV+EILSD P++DRNRA  +AG+GK KN++V H+IGNPM+Y TLKETI NI   S    DIP S+VVISDREWLLGDPSRADKH+AYSLLLAE+IC+KLGVKVQNLVAEI+DSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENS+LNEVWKDIL+A+GDEIYVKD+ LYMKEGE PSFAELSERA+LR+EVAIGYVKNN KVINPV K EPLSLEL DSLIVISELE  QP+
Sbjct:   86 RFFKIDQGSSPQGHQSQ--IMMASMLSYLLLRLTKLNIISSFTKMIQEVLPCVVQSFGASSLPFASISNSLNKSTPLKLDVSLPSFQDIRWSFARLLYLFNIQLERNVATFLVVLLAACFSFVVIGGFLFFKFRNDTQSLEDCLWEAWACLCSSSTHLKQRTRVERVIGFVLAIWGILFYSRLLSTMTEQFRNNMQKLREGAQMQVLESDHIIICGVNSHLPFILKQLNKYHEFAVRLGTATARRQRILLMSDLPRKQIDKIAENIAKDLNHIDILTKSCSLNLTKSYERAASSKARSIIILPTKGDRYEVDTDAFLSVLALQPISEMESVPTIVEVSSPNTCDLLKSISGLKVQPVENVASKLFVQCSRQKGLVKIYRHLLNYRKNVFNLCNFPNLAGMKYRQFRRGFQEAVVCGIYRNGKIYFHPSDEEILQQNDKVLFIAPIHKRKKPQIPYSNKISD---SFQNFEVLERNGETPSHALELKKTRLENIVQRPIKSGSKASDWTLGPKEFILLLGWRPDIVEMIEEYDNYLGPGSVVEILSDAPLDDRNRATKVAGRGKPKNIQVSHKIGNPMNYDTLKETIMNIQN-SLNEEDIPLSVVVISDREWLLGDPSRADKHAAYSLLLAENICDKLGVKVQNLVAEIIDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSELNEVWKDILDAEGDEIYVKDISLYMKEGETPSFAELSERAYLRQEVAIGYVKNNKKVINPVPKSEPLSLELTDSLIVISELEVEQPI 851
[Close]
BLAST of XM_017400481.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P3ZCJ8 ((putative ion channel POLLUX-like 2 isoform X1 {ECO:0000313|RefSeq:XP_015876482.1}))

HSP 1 Score: 1198.34 bits (3099), Expect = 0.000e+0
Identity = 584/772 (75.65%), Postives = 669/772 (86.66%), Query Frame = 0
 
Query:   10 KILKVDLKSRLQHVQGKDKLMMSYLSCYSLGRMTQQISSNAVFNMLKDILLFVIRTSAATSSPFACISNSLNKPTPLKLDIILPSIRDIRWNFARLLYLFNIRLERNVATFLVVLLVACFSFVMIGGLLFYNFRGSTQSLEDCFWEAWACLISSSTHLRQRTRVERVIGFILAIWGILFYSRLLSTMTEQFRHNMQKLREGAQMQVLETDHIIICGVNSHLTFILKQLNKYHEFAVRLGTATARRQRILLLSDLPRKQVDKIAENIGKDLNHIDILTKSCSLSMTISFERAAANKARAIIILPTKGDRYGIDTDAFLSVLALQPLPDMGSVPAIVEVSSSNTCELLKTISGLKVEPVENVASKLFVQCSRQKGLIKIYRHLLNYRKNVFNLYNFTNLTGLKYKQIRRGFQEAVVCGIYRRGKVDFHPNDDEVLEQDDKVLFIAPIPGKKKPYLASPDVISEDVSGIHNLVQVNKNVESLSFAQHMEKLRFENIVKRPKKSGSKASDWTVGPKEWILMVGWRPDVVEMINEYDNYLGPGSVLEILSDVPIEDRNRARDLAGQGKLKNVKVFHRIGNPMDYTTLKETITNIHKPSTKGGDIPFSIVVISDREWLLGDPSRADKHSAYSLLLAESICNKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSDLNEVWKDILNADGDEIYVKDVGLYMKEGENPSFAELSERAHLRREVAIGYVKNNNKVINPVSKLEPLSLELNDSLIVISELEGVQPL 781
            +  K+D  S  Q  Q +  +MM+ +  Y L R+T+    ++   M++++L  V+++  A+S PFA ISNSLNKPTPLKLD+ LPS +DIRW+FARLLYLFNI+LERNVATFLVVLL ACFSFV+IGG LF+ FR  TQSLEDC WEAWACL SSSTHL+QRTRVERVIGF+LAIWGILFYSRLLSTMTEQFR+NMQKLREGAQMQVLE+DHIIICGVNSHL FILKQLNKYHEFAVRLGTATARRQRILL+SDLPRKQ+DKIAENI KDLNHIDILTKSCSL++T S+ERAA++KAR+IIILPTKGDRY +DTDAFLSVLALQP+ +M SVP IVEVSS NTC+LLK+ISGLKV+PVENVASKLFVQCSRQKGL+KIYRHLLNYRKNVFNL NF NL G+KY+Q RRGFQEAVVCGIYR GK+ FHP+D+E+L+Q+DKVLFIAPI  +KKP +   + IS+      N   + +N E+ S A  ++K R ENIVKRP KSGSKASDWT+GPKE+IL++GWRPD+VEMI EYDNYLGPGSV+EILSD P++DRNRA  +AG+GK KN++V H+IGNPM+Y TLKETI NI   S    DIP S+VVISDREWLLGDPSRADKH+AYSLLLAE+IC+KLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENS+LNEVWKDIL+A+GDEIY+KD+ LYMKEGE PSFAELSERA LR+EVAIGYVKNN KVINPV K EPL LEL DSLIVISELE  QP+
Sbjct:   52 RFFKIDQGSSPQGHQSQ--IMMASMLSYLLLRLTKLNIISSFTKMIQEVLPCVVQSFGASSLPFASISNSLNKPTPLKLDVSLPSFQDIRWSFARLLYLFNIQLERNVATFLVVLLAACFSFVVIGGFLFFKFRNDTQSLEDCLWEAWACLCSSSTHLKQRTRVERVIGFVLAIWGILFYSRLLSTMTEQFRNNMQKLREGAQMQVLESDHIIICGVNSHLPFILKQLNKYHEFAVRLGTATARRQRILLMSDLPRKQIDKIAENIAKDLNHIDILTKSCSLNLTKSYERAASSKARSIIILPTKGDRYEVDTDAFLSVLALQPISEMESVPTIVEVSSPNTCDLLKSISGLKVQPVENVASKLFVQCSRQKGLVKIYRHLLNYRKNVFNLCNFPNLAGMKYRQFRRGFQEAVVCGIYRNGKIYFHPSDEEILQQNDKVLFIAPIHKRKKPQIPYSNKISD---SFQNFEVLERNGETHSHALELKKTRLENIVKRPIKSGSKASDWTLGPKEFILLLGWRPDIVEMIEEYDNYLGPGSVVEILSDAPLDDRNRATKVAGRGKPKNIQVSHKIGNPMNYDTLKETIMNIQN-SLNEEDIPLSVVVISDREWLLGDPSRADKHAAYSLLLAENICDKLGVKVQNLVAEIVDSKLGKQITRIKPSLTYIAAEEVMSLVTAQVAENSELNEVWKDILDAEGDEIYMKDISLYMKEGETPSFAELSERACLRQEVAIGYVKNNKKVINPVPKSEPLFLELTDSLIVISELEVEQPI 817
Match NameStatsDescription
A0A5J5ABR3E-Value: 0.000e+0, PID: 78.44Castor_Poll_mid domain-containing protein {ECO:000... [more]
A0A5B7AY23E-Value: 0.000e+0, PID: 79.87(Putative ion channel POLLUX-like 2 {ECO:0000313|E... [more]
A0A5B7B0R4E-Value: 0.000e+0, PID: 80.00Castor_Poll_mid domain-containing protein {ECO:000... [more]
A0A5J5C488E-Value: 0.000e+0, PID: 79.50Castor_Poll_mid domain-containing protein {ECO:000... [more]
A0A2R6Q3H0E-Value: 0.000e+0, PID: 78.65(Ion channel POLLUX-like {ECO:0000313|EMBL:PSS0140... [more]
A0A6P6WS79E-Value: 0.000e+0, PID: 75.19(putative ion channel POLLUX-like 2 isoform X3 {EC... [more]
A0A6I9TVL6E-Value: 0.000e+0, PID: 75.45(putative ion channel POLLUX-like 2 isoform X1 {EC... [more]
A0A5C7IRY0E-Value: 0.000e+0, PID: 75.19Castor_Poll_mid domain-containing protein {ECO:000... [more]
A0A6P3YWF3E-Value: 0.000e+0, PID: 75.52(putative ion channel POLLUX-like 2 {ECO:0000313|R... [more]
A0A6P3ZCJ8E-Value: 0.000e+0, PID: 75.65(putative ion channel POLLUX-like 2 isoform X1 {EC... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.