Resource Type:
Polypeptide
Name:
XM_017375343.1
Identifier:
XM_017375343.1-protein
Sequence:
MKNWSGGVLIVGLGLILLLRYSFVGKQPHKQSAYDFFNSHLSKDSTESGD
SSNTVKTETVQNPEKRPHFVDVEGLDDLYAFRNMSEEESKVLLVWSQMRM
LLSRSDALPETFQGIKEAAVSWKELLSLIEKDKSSQLNDNIQNDKKCPYY
VGMPSGLNTSTSGSGYILEIPCGLVEDSSVTLIGIPNRGQGNFTIELVAS
KFPEEQNPPIVLHFNVFLPGENLTKEPIIVQNTWTNETGWGKEERCPNHH
SINTTNVDGLAKCNEEVATSAEEEIAHASNLSVNQSSNVSSGSAHVSANF
PFSEGSPFTATLWTGVEGFHMSVNGRHETSFEYREKLEPWLINGVRLLGD
VEPVSAIAKGLPVSEDLDLIVDVEHLKAPVTAKKRLVLLIGVFSSCNNFN
RRMALRRSWMQYDAVRSGEVAVRFFTGLHKNIQVNFQLWKESQAYGDMQL
MPFVDYYSLISLKTIAICTMGTKILPAKYIMKTDDDAFVRIDEVLSSLKQ
KASDGLLYGLISFESKPQRDAENKWFISTEEWPHESYPPWAHGPGYIISR
DIAKFIVQAHQKRELKLFKLEDVSMGIWIEKFKERGHEVQYISDERFYNA
GCEPNYILAHYQNPRMVLCLWEKLQKEHKPDCCE
Sequence Length:
634
Sequence Checksum:
6002f119c0ddd7a3a101f95cc9be081a
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017375343.1, derives from mRNA, XM_017375343.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017375343.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017375343.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BZN1 ((Putative beta-1,3-galactosyltransferase 16 {ECO:0000313|EMBL:MPA72533.1}) (2.4.1.- {ECO:0000313|EMBL:MPA72533.1}))
HSP 1 Score: 961.059 bits (2483), Expect = 0.000e+0
Identity = 455/643 (70.76%), Postives = 536/643 (83.36%), Query Frame = 0
Match: A0A5B7BZN1 ((Putative beta-1,3-galactosyltransferase 16 {ECO:0000313|EMBL:MPA72533.1}) (2.4.1.- {ECO:0000313|EMBL:MPA72533.1}))
HSP 1 Score: 961.059 bits (2483), Expect = 0.000e+0
Identity = 455/643 (70.76%), Postives = 536/643 (83.36%), Query Frame = 0
Query: 1 MKNWSGGVLIVGLGLILLLRYSFVGKQPHKQSAYDFFNSHLSKDSTESG----DSSNTVKTETVQNPEKRPHFVDVEGLDDLYAFRNMSEEESKVLLVWSQMRMLLSRSDALPETFQGIKEAAVSWKELLSLIEKDKSSQL-----NDNIQNDKKCPYYVGMPSGLNTSTSGSGYILEIPCGLVEDSSVTLIGIPNRGQGNFTIELVASKFPEEQNPPIVLHFNVFLPGENLTKEPIIVQNTWTNETGWGKEERCPNHHSINTTNVDGLAKCNEEVATSAEEEIAHASNLSVNQSSNVSSGSAHVSANFPFSEGSPFTATLWTGVEGFHMSVNGRHETSFEYREKLEPWLINGVRLLGDVEPVSAIAKGLPVSEDLDLIVDVEHLKAPVTAKKRLVLLIGVFSSCNNFNRRMALRRSWMQYDAVRSGEVAVRFFTGLHKNIQVNFQLWKESQAYGDMQLMPFVDYYSLISLKTIAICTMGTKILPAKYIMKTDDDAFVRIDEVLSSLKQKASDGLLYGLISFESKPQRDAENKWFISTEEWPHESYPPWAHGPGYIISRDIAKFIVQAHQKRELKLFKLEDVSMGIWIEKFKERGHEVQYISDERFYNAGCEPNYILAHYQNPRMVLCLWEKLQKEHKPDCCE 634
MK WSGGVLI+ L IL+LRYSF+G QP +QSAYDFFN+H + DS G +SS + +KRPH +DV+GL+DLY N+SEEESK LLV +QM LLSRSDALPET QGIKEAA++WKELLS IE++K+S+ N+NIQ DK CPY V S N + S SG +L+IPCGLVEDSS+T+IGIP+ Q +F IEL+ S+ PEE PPI+LH+NV+LPG+NLT++P+IVQNTWTNE WGKEERCP+H S N VDGL KCNE+V S EE + S+ S ++ +NVS+GSAHVSANFPF E +PFTATLW GVEGFHM+VNGRHETSF YREKLEPWL++GV+++G ++ +SA+AKGLPVSEDLDL+ EHLKAP +KKRLV+LIGVFS+ NNF RRMALRRSWMQY+AVRSG+VAVRFF GLHKN QVNF+LW+E+QAYGD+QLMPFVDYYSL+SLKTIAIC MGTKILPAKYIMKTDDDAFVRIDEVLSSLK K S+GLLYGLISFES P RD +NKW+IS EEWPH SYPPWAHGPGYIIS+DIAKFIVQ HQ+R+LKLFKLEDV+MGIWIE+FK+ GH+VQYI+DE F+NAGCE NYILAHYQNPRMVLCLWEKLQK H+P+CCE
Sbjct: 1 MKKWSGGVLIIVLATILVLRYSFMGNQPKRQSAYDFFNNHPTNDSGLKGGDQVESSEKKVKKLKSTMKKRPHLIDVKGLNDLYTLGNISEEESKSLLVSAQMHPLLSRSDALPETAQGIKEAAIAWKELLSTIEQNKASKFGNVSNNNNIQEDKDCPYSV---STFNMTISSSGSVLQIPCGLVEDSSITVIGIPDGQQRSFQIELLGSQLPEEPKPPIILHYNVYLPGDNLTEQPVIVQNTWTNELSWGKEERCPDHGSTNILKVDGLVKCNEQVVRSTLEENLNVSHPSSDKLTNVSNGSAHVSANFPFVESNPFTATLWVGVEGFHMTVNGRHETSFAYREKLEPWLVSGVKVMGGLDLISALAKGLPVSEDLDLVAAAEHLKAPPISKKRLVMLIGVFSTGNNFERRMALRRSWMQYEAVRSGDVAVRFFIGLHKNRQVNFELWREAQAYGDIQLMPFVDYYSLLSLKTIAICIMGTKILPAKYIMKTDDDAFVRIDEVLSSLKGKVSNGLLYGLISFESAPHRDKDNKWYISAEEWPHASYPPWAHGPGYIISQDIAKFIVQGHQERDLKLFKLEDVAMGIWIEQFKKHGHKVQYINDEHFHNAGCESNYILAHYQNPRMVLCLWEKLQKTHEPNCCE 640
BLAST of XM_017375343.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PWL0 ((Hydroxyproline O-galactosyltransferase {ECO:0000313|EMBL:PSR97862.1}))
HSP 1 Score: 937.562 bits (2422), Expect = 0.000e+0
Identity = 442/644 (68.63%), Postives = 532/644 (82.61%), Query Frame = 0
Match: A0A2R6PWL0 ((Hydroxyproline O-galactosyltransferase {ECO:0000313|EMBL:PSR97862.1}))
HSP 1 Score: 937.562 bits (2422), Expect = 0.000e+0
Identity = 442/644 (68.63%), Postives = 532/644 (82.61%), Query Frame = 0
Query: 1 MKNWSGGVLIVGLGLILLLRYSFVGKQPHKQSAYDFFNSHLSKDS--TESGDSSNTVKTET--VQ-NPEKRPHFVDVEGLDDLYAFRNMSEEESKVLLVWSQMRMLLSRSDALPETFQGIKEAAVSWKELLSLIEKDKSSQL-----NDNIQNDKKCPYYVGMPSGLNTSTSGSGYILEIPCGLVEDSSVTLIGIPNRGQGNFTIELVASKFPEEQNPPIVLHFNVFLPGENLTKEPIIVQNTWTNETGWGKEERCPNHHSINTTNVDGLAKCNEEVATSAEEEIAHASNLSVNQSSNVSSGSAHVSANFPFSEGSPFTATLWTGVEGFHMSVNGRHETSFEYREKLEPWLINGVRLLGDVEPVSAIAKGLPVSEDLDLIVDVEHLKAPVTAKKRLVLLIGVFSSCNNFNRRMALRRSWMQYDAVRSGEVAVRFFTGLHKNIQVNFQLWKESQAYGDMQLMPFVDYYSLISLKTIAICTMGTKILPAKYIMKTDDDAFVRIDEVLSSLKQKASDGLLYGLISFESKPQRDAENKWFISTEEWPHESYPPWAHGPGYIISRDIAKFIVQAHQKRELKLFKLEDVSMGIWIEKFKERGHEVQYISDERFYNAGCEPNYILAHYQNPRMVLCLWEKLQKEHKPDCCE 634
MK WSGG+LI+G IL+L YSF+GKQP KQSAYDFFN+H DS T S D N+ TE VQ N +K+P V VEGL DLY +N+S+EESKVLLVW+ MR LLSRSDALPET QG+KEAA++WKELLS++E++K+ + N NI K C Y V S NT+ S SG +L+IPCGLVEDSS+T+IGIP+ + F IELV S+FPEE PP++LH+NV +PG+N+T+EP+IVQNTWT E GWGKEERCPNH S N+ +D L KCNE+V EE +AS+ + ++++NVS GSAH S NFPF EG+PFTATLW G+EGFHM+VNGRHETSF YR+ LEPWL++GV++ G V+ +SA+AKGLPVSEDLDL+VDVE LKAP + KRLVLLIG+FS+ NNF RRMALRRSWMQY+ +RSG VAVRFF+GL KN VNFQLWKE+QAYGD+QLMPFVDYYSL++LKTIAIC +GTK+LPA YIMK DDDAFVRIDEV+SSLK K S+GLLYGLI+FES PQRD +NKW+IS EEWPHESYPPWAHGPGYIIS+DIAKFIVQ HQ+R+L+LFKLEDV++GIWIE+FK +GH+VQ+ISD+RFYNAGCEPNYILAHYQNPR VLCLWE+LQK+ KP+CCE
Sbjct: 1 MKKWSGGMLILGFATILVLCYSFIGKQPQKQSAYDFFNNHPPDDSAVTSSRDRVNSSNTEVKIVQINVKKKPRRVVVEGLSDLYTLKNISKEESKVLLVWAHMRSLLSRSDALPETGQGVKEAAIAWKELLSVVEEEKAYKFLETRNNSNIPGHKDCRYSV---SAFNTTISSSGNVLQIPCGLVEDSSITVIGIPDGHRARFEIELVGSRFPEEATPPVILHYNVSVPGDNVTEEPVIVQNTWTKELGWGKEERCPNHRSSNSPKIDQLTKCNEQVVRRIAEENLNASHPNSDKATNVSDGSAHASTNFPFVEGNPFTATLWVGLEGFHMTVNGRHETSFAYRKNLEPWLVSGVKVAGGVDLISALAKGLPVSEDLDLMVDVEQLKAPPISTKRLVLLIGIFSTGNNFERRMALRRSWMQYEPIRSGNVAVRFFSGLDKNKHVNFQLWKEAQAYGDIQLMPFVDYYSLLTLKTIAICILGTKVLPATYIMKMDDDAFVRIDEVISSLKGKVSNGLLYGLIAFESSPQRDKDNKWYISAEEWPHESYPPWAHGPGYIISQDIAKFIVQGHQERDLQLFKLEDVAVGIWIEEFKNQGHKVQHISDDRFYNAGCEPNYILAHYQNPRKVLCLWERLQKDQKPECCE 641
BLAST of XM_017375343.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0GLD7 ((Galactosyltransferase family protein {ECO:0000313|EMBL:GFZ11595.1}))
HSP 1 Score: 934.095 bits (2413), Expect = 0.000e+0
Identity = 442/644 (68.63%), Postives = 532/644 (82.61%), Query Frame = 0
Match: A0A7J0GLD7 ((Galactosyltransferase family protein {ECO:0000313|EMBL:GFZ11595.1}))
HSP 1 Score: 934.095 bits (2413), Expect = 0.000e+0
Identity = 442/644 (68.63%), Postives = 532/644 (82.61%), Query Frame = 0
Query: 1 MKNWSGGVLIVGLGLILLLRYSFVGKQPHKQSAYDFFNSHLSKDS--TESGDSSNTVKTET--VQ-NPEKRPHFVDVEGLDDLYAFRNMSEEESKVLLVWSQMRMLLSRSDALPETFQGIKEAAVSWKELLSLIEKDKSSQL-----NDNIQNDKKCPYYVGMPSGLNTSTSGSGYILEIPCGLVEDSSVTLIGIPNRGQGNFTIELVASKFPEEQNPPIVLHFNVFLPGENLTKEPIIVQNTWTNETGWGKEERCPNHHSINTTNVDGLAKCNEEVATSAEEEIAHASNLSVNQSSNVSSGSAHVSANFPFSEGSPFTATLWTGVEGFHMSVNGRHETSFEYREKLEPWLINGVRLLGDVEPVSAIAKGLPVSEDLDLIVDVEHLKAPVTAKKRLVLLIGVFSSCNNFNRRMALRRSWMQYDAVRSGEVAVRFFTGLHKNIQVNFQLWKESQAYGDMQLMPFVDYYSLISLKTIAICTMGTKILPAKYIMKTDDDAFVRIDEVLSSLKQKASDGLLYGLISFESKPQRDAENKWFISTEEWPHESYPPWAHGPGYIISRDIAKFIVQAHQKRELKLFKLEDVSMGIWIEKFKERGHEVQYISDERFYNAGCEPNYILAHYQNPRMVLCLWEKLQKEHKPDCCE 634
MK WSGG+LI+G IL+L YSF+GKQP KQSAYDFFN+H DS T S D N+ TE VQ N +K+P V VEGL DLY +N+++EESKVLLVW+ MR LLSRSDALPET QG+KEAA++WKELLS++E++K+ + N NI K C Y V S NT+ S SG +L+IPCGLVEDSS+T+IGIP+R + F IELV S+FPEE PP++LH+NV +PG+N+T+EP+IVQNTWT E GWGKEERCPNH S N+ VD L KCNE+V EE +AS+ + ++++NVS G AH S NFPF EG+PFTATLW G+EGFHM+VNGRHETSF YR+ LEPWL++GV++ G V+ +SA+AKGLPVSEDLDL+VDVE LKAP + KRLVLLIG+FS+ NNF RRMALRRSWMQY+ +RSG VAVRFF+GL KN VNFQLWKE+QAYGD+QLMPFVDYYSL++LKTIAIC +GTK+LPA YIMK DDDAFVRIDEV+SSLK K S+GLLYGLI+FES PQRD +NKW+IS EEWPHESYPPWAHGPGYIIS+DIAKFIVQ HQ+R+L+LFKLEDV++GIWIE+FK +GH+VQ+ISD+RFYNAGCEPNYILAHYQNPR VLCLWE+LQK+ KP+CCE
Sbjct: 1 MKKWSGGMLILGFATILVLCYSFIGKQPQKQSAYDFFNNHPPDDSAVTVSRDRVNSSNTEVKIVQINVKKKPRRVVVEGLSDLYTLKNIAKEESKVLLVWAHMRSLLSRSDALPETAQGVKEAAIAWKELLSVVEEEKAYKFSETRNNSNIPGHKDCRYSV---SAFNTTISSSGNVLQIPCGLVEDSSITVIGIPDRAR--FEIELVGSRFPEEATPPVILHYNVSVPGDNVTEEPVIVQNTWTKELGWGKEERCPNHRSSNSPKVDQLMKCNEQVVRRIVEENLNASHPNSDKATNVSDGRAHASTNFPFVEGNPFTATLWVGLEGFHMTVNGRHETSFAYRKNLEPWLVSGVKVAGGVDLISALAKGLPVSEDLDLMVDVEQLKAPPISTKRLVLLIGIFSTGNNFERRMALRRSWMQYEPIRSGNVAVRFFSGLDKNKHVNFQLWKEAQAYGDIQLMPFVDYYSLLTLKTIAICILGTKVLPATYIMKMDDDAFVRIDEVISSLKGKVSNGLLYGLIAFESSPQRDKDNKWYISAEEWPHESYPPWAHGPGYIISQDIAKFIVQGHQERDLQLFKLEDVAVGIWIEEFKNQGHKVQHISDDRFYNAGCEPNYILAHYQNPRKVLCLWERLQKDQKPECCE 639
BLAST of XM_017375343.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7GPT3 (Galectin domain-containing protein {ECO:0000259|PROSITE:PS51304})
HSP 1 Score: 927.932 bits (2397), Expect = 0.000e+0
Identity = 447/646 (69.20%), Postives = 539/646 (83.44%), Query Frame = 0
Match: A0A7J7GPT3 (Galectin domain-containing protein {ECO:0000259|PROSITE:PS51304})
HSP 1 Score: 927.932 bits (2397), Expect = 0.000e+0
Identity = 447/646 (69.20%), Postives = 539/646 (83.44%), Query Frame = 0
Query: 1 MKNWSGGVLIVGLGLILLLRYSFVGK-QPHKQSAYDFFNSH------LSKDSTESGDSSNTVKTETVQNPEKRPHFVDVEGLDDLYAFRNMSEEESKVLLVWSQMRMLLSRSDALPETFQGIKEAAVSWKELLSLIEKDKSSQLND-NIQNDKKCPYYVGMPSGLNTSTSGSGYILEIPCGLVEDSSVTLIGIPNRGQGNFTIELVASKFPEEQNPPIVLHFNVFLPGENLTKEPIIVQNTWTNETGWGKEERCPNHHSINT---TNVDGLAKCNEEVATSAEEEIAHASNLSVNQSSNVSSGSAHVSANFPFSEGSPFTATLWTGVEGFHMSVNGRHETSFEYREKLEPWLINGVRLLGDVEPVSAIAKGLPVSEDLDLIVDVEHLKAPVTAKKRLVLLIGVFSSCNNFNRRMALRRSWMQYDAVRSGEVAVRFFTGLHKNIQVNFQLWKESQAYGDMQLMPFVDYYSLISLKTIAICTMGTKILPAKYIMKTDDDAFVRIDEVLSSLK-QKASDGLLYGLISFESKPQRDAENKWFISTEEWPHESYPPWAHGPGYIISRDIAKFIVQAHQKRELKLFKLEDVSMGIWIEKFKERGHEVQYISDERFYNAGCEPNYILAHYQNPRMVLCLWEKLQKEHKPDCCE 634
MK WSGG+LI+ L IL LRY F+GK QP KQS+YDFFN+H + +D+ E S T K + N +K+PH +D++GL DLY+ +N+S EESK LLVW+QMR LLSRSDALPET QGIKEA+++WKELLS+IEK+K+S+ + N + K CPY + + NT+ S SG +L+IPCGLVEDSS+T+IGIP+ +G F I+LV S+F EE PP++LH+NV LPG+NLT+EP+IVQNTWTNE GWGKEERCP+H S N VDGL KCNE+V S E+ +AS+ ++ +NVS+GSAHVSANFPF EG+PFTATLW G+EGFHM+VNGRHETSF YR+KLEPWL++GV++ G ++ +SA+AKGLPVSEDLDLIVD+EHLKAP +KKRL +LIGVFS+ NNF RRMALRRSWMQY+A+ SG VAVRFF GLHKN QVNFQLWKE+QAYGD+QLMPFVDYYSL++LKT+AIC +GT+ILPAKYIMKTDDDAFVR+DEVLSSLK +K S+GLLYGLISFES P RD +NKW+IS EEWPHESYPPWAHGPGYIIS+DIAKFIVQ HQ+R L+LFKLEDV++GIWIE+FKE+GH+VQ ISDERFYNAGCE NYILAHYQNPR VLCLWEKLQKEH+P CCE
Sbjct: 1 MKKWSGGLLILALASILFLRYCFMGKKQPQKQSSYDFFNNHPLDDYDIIRDNDEVDSSQTTTKILQI-NVKKKPHLIDIKGLRDLYSPKNISSEESKALLVWAQMRSLLSRSDALPETAQGIKEASIAWKELLSVIEKEKASKFYETNNKEHKDCPYSI---TAFNTTISSSGSVLQIPCGLVEDSSITVIGIPDGHRGTFQIKLVGSQFTEEATPPVILHYNVSLPGDNLTEEPVIVQNTWTNELGWGKEERCPDHGSFNALKGITVDGLMKCNEQVVRSTVEQNLNASHPDGDKLTNVSNGSAHVSANFPFVEGNPFTATLWVGLEGFHMTVNGRHETSFTYRKKLEPWLVSGVKVAGGLDLISALAKGLPVSEDLDLIVDIEHLKAPPISKKRLEMLIGVFSTGNNFERRMALRRSWMQYEAISSGNVAVRFFIGLHKNKQVNFQLWKEAQAYGDIQLMPFVDYYSLLTLKTVAICILGTQILPAKYIMKTDDDAFVRVDEVLSSLKGKKVSNGLLYGLISFESSPHRDKDNKWYISAEEWPHESYPPWAHGPGYIISKDIAKFIVQGHQQRVLQLFKLEDVAVGIWIEQFKEQGHKVQCISDERFYNAGCETNYILAHYQNPRKVLCLWEKLQKEHEPQCCE 642
BLAST of XM_017375343.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A067JZG7 (Galectin domain-containing protein {ECO:0000259|PROSITE:PS51304})
HSP 1 Score: 898.271 bits (2320), Expect = 0.000e+0
Identity = 430/641 (67.08%), Postives = 518/641 (80.81%), Query Frame = 0
Match: A0A067JZG7 (Galectin domain-containing protein {ECO:0000259|PROSITE:PS51304})
HSP 1 Score: 898.271 bits (2320), Expect = 0.000e+0
Identity = 430/641 (67.08%), Postives = 518/641 (80.81%), Query Frame = 0
Query: 1 MKNWSGGVLIVGLGLILLLRYSFVGKQPHK-QSAYDFFNSHLSKDS--TESGD-SSNTVKTETVQNPEKRPHFVDVEGLDDLYAFRNMSEEESKVLLVWSQMRMLLSRSDALPETFQGIKEAAVSWKELLSLIEKDKSSQLND-NIQNDKKCPYYVGMPSGLNTSTSGSGYILEIPCGLVEDSSVTLIGIPNRGQGNFTIELVASKFPEEQNPPIVLHFNVFLPGENLTKEPIIVQNTWTNETGWGKEERCPNHHSINTTN--VDGLAKCNEEVATSAEEEIAHASNLSVNQSSNVSSGSAHVSANFPFSEGSPFTATLWTGVEGFHMSVNGRHETSFEYREKLEPWLINGVRLLGDVEPVSAIAKGLPVSEDLDLIVDVEHLKAPVTAKKRLVLLIGVFSSCNNFNRRMALRRSWMQYDAVRSGEVAVRFFTGLHKNIQVNFQLWKESQAYGDMQLMPFVDYYSLISLKTIAICTMGTKILPAKYIMKTDDDAFVRIDEVLSSLKQKASDGLLYGLISFESKPQRDAENKWFISTEEWPHESYPPWAHGPGYIISRDIAKFIVQAHQKRELKLFKLEDVSMGIWIEKFKERGHEVQYISDERFYNAGCEPNYILAHYQNPRMVLCLWEKLQKEHKPDCCE 634
MK WSGG++I+GL IL+L Y +G QP K QSAYDFF +H + DS ++G S + + + RPHFV+VEGL+DLYA N+S+EESK LLVWSQMR+LLSRSDALPET QGIKEA+V+WK+LLS+IE+DK+ + + + DK CPY + S +N +TS +G ILEIPCGLVEDSS+T++GIP+ G+F I L SK E+QNPPI+LH+ V LPG+N+T+E IVQNTWTNE GWGKEERC H S T VDGL CNE++ S EE + S+ S + +NVS G AH +ANFPF+EG+PFTATLW G EGFHM+VNGRHETSF +REKLEPW ++ V++ G ++ +S +AK LPVSED DL+VDVE LKAP +KR+ +L+GVFS+ NNF RRMALRRSWMQY+AVRSG+VAVRFF GLHKN QVN++LWKE+QAYGD+QLMPFVDYYSLISLKT+AIC MGTKILPAKYIMKTDDDAFVRIDEV++SLK KAS LLYGLISFES P RD E+KW+IS EEWPH SYPPWAHGPGYIISRDIAKFI + H++R+LKLFKLEDV+MGIWIE+FK G +VQY SDERFYNAGCE NYILAHYQ+PR+VLCLWEKLQKEH+P+CCE
Sbjct: 13 MKKWSGGMVIIGLAAILVLSYGLMGTQPQKKQSAYDFFRNHPANDSHSKDTGRLSPSHMDIKKATKSSIRPHFVNVEGLNDLYASNNISKEESKALLVWSQMRLLLSRSDALPETAQGIKEASVAWKDLLSMIEEDKTMKSSKIDKPEDKTCPYSL---STINRTTSSNGTILEIPCGLVEDSSITVVGIPDGHNGSFQIALEGSKLLEDQNPPIILHYKVRLPGDNMTEEAFIVQNTWTNEHGWGKEERCHAHGSARNTKPKVDGLVLCNEQIVRSTGEENLNTSHASGDVLANVSQGGAHATANFPFAEGNPFTATLWVGSEGFHMTVNGRHETSFAFREKLEPWEVSRVKVDGVLDVLSLLAKELPVSEDHDLVVDVELLKAPAVKRKRIAMLVGVFSTGNNFERRMALRRSWMQYEAVRSGDVAVRFFIGLHKNGQVNYELWKEAQAYGDVQLMPFVDYYSLISLKTVAICIMGTKILPAKYIMKTDDDAFVRIDEVITSLKGKASSSLLYGLISFESSPHRDKESKWYISNEEWPHSSYPPWAHGPGYIISRDIAKFIAEGHRRRDLKLFKLEDVAMGIWIEQFKNSGQKVQYTSDERFYNAGCEANYILAHYQSPRLVLCLWEKLQKEHQPNCCE 650
BLAST of XM_017375343.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2C9WAY6 (Galectin domain-containing protein {ECO:0000259|PROSITE:PS51304})
HSP 1 Score: 897.116 bits (2317), Expect = 0.000e+0
Identity = 431/644 (66.93%), Postives = 516/644 (80.12%), Query Frame = 0
Match: A0A2C9WAY6 (Galectin domain-containing protein {ECO:0000259|PROSITE:PS51304})
HSP 1 Score: 897.116 bits (2317), Expect = 0.000e+0
Identity = 431/644 (66.93%), Postives = 516/644 (80.12%), Query Frame = 0
Query: 1 MKNWSGGVLIVGLGLILLLRYSFVGKQ----PHKQSAYDFFNSHLSKDSTESGDS---SNTVKTETVQNPEKRPHFVDVEGLDDLYAFRNMSEEESKVLLVWSQMRMLLSRSDALPETFQGIKEAAVSWKELLSLIEKDKS--SQLNDNIQNDKKCPYYVGMPSGLNTSTSGSGYILEIPCGLVEDSSVTLIGIPNRGQGNFTIELVASKFPEEQNPPIVLHFNVFLPGENLTKEPIIVQNTWTNETGWGKEERCPNHHS-INTTNVDGLAKCNEEVATSAEEEIAHASNLSVNQSSNVSSGSAHVSANFPFSEGSPFTATLWTGVEGFHMSVNGRHETSFEYREKLEPWLINGVRLLGDVEPVSAIAKGLPVSEDLDLIVDVEHLKAPVTAKKRLVLLIGVFSSCNNFNRRMALRRSWMQYDAVRSGEVAVRFFTGLHKNIQVNFQLWKESQAYGDMQLMPFVDYYSLISLKTIAICTMGTKILPAKYIMKTDDDAFVRIDEVLSSLKQKASDGLLYGLISFESKPQRDAENKWFISTEEWPHESYPPWAHGPGYIISRDIAKFIVQAHQKRELKLFKLEDVSMGIWIEKFKERGHEVQYISDERFYNAGCEPNYILAHYQNPRMVLCLWEKLQKEHKPDCCE 634
MK WSGG++IV L +IL+ YS + Q KQ+AYDFF +H DS S S V+ + V K+ HFV+VEGL+DLYA N S+EESK LLVWSQMR+LLSRSDALPET +GIKEA+++WK+LLS+IE+DK+ S + D +N K CPY V + +N S +G +IPCGLVEDSS+T++GIPN G+F +EL S+ EQNPPI+LH+ V LPG+N+T+EP IVQNTWTNE GWGKEE+CP H S I VDGL CNE++ S EE +AS S + +NVS GSAH SANFPFSE +PFTATLW G EGFHM+VNGRHETSF YREKLEPW ++GV++ G ++ +S +AKGLPVSED DL++D E L+APVT KKRL LL+GVFS+ NNF RRMALRRSWMQY+AV SG+VAVRFF GLHKN QVNF+LWKE+QAYGD+QLMPFVDYYSLISLKTIAIC MGTKILPAKYIMKTDDDAFVRIDEVL+SLK KASDGLLYGL+SF+S P R+ ++KW+IS EEWPH SYPPWAHGPGYI+SR+IAKFI Q HQ+R+ KLFKLEDV+MGIWIE+ K+RG EV Y+SDERF+NAGCE NYILAHYQ+PR+VLCLWEKLQKEH+P+CCE
Sbjct: 13 MKKWSGGMMIVALAVILVFSYSLLKTQRSQPQKKQTAYDFFRNHPINDSHVKDTSYARSPQVEVDKVAKSSKKIHFVNVEGLNDLYAPNNFSKEESKALLVWSQMRLLLSRSDALPETAKGIKEASIAWKDLLSMIEEDKATKSSIIDKTEN-KNCPYSV---NAINIMASSNGPTFDIPCGLVEDSSITIVGIPNEHNGSFQLELEGSQLLGEQNPPIILHYRVSLPGDNITEEPFIVQNTWTNEHGWGKEEKCPAHGSNIPKPKVDGLVLCNEQIVRSTVEETLNASLPSRDILANVSQGSAHASANFPFSEANPFTATLWVGSEGFHMTVNGRHETSFAYREKLEPWAVSGVKVDGGLDILSVLAKGLPVSEDHDLVIDAELLRAPVTKKKRLALLVGVFSTGNNFERRMALRRSWMQYEAVHSGDVAVRFFIGLHKNRQVNFELWKEAQAYGDVQLMPFVDYYSLISLKTIAICIMGTKILPAKYIMKTDDDAFVRIDEVLTSLKGKASDGLLYGLMSFDSSPHREKDSKWYISNEEWPHSSYPPWAHGPGYIVSRNIAKFIAQGHQERDFKLFKLEDVAMGIWIEELKKRGQEVHYVSDERFHNAGCESNYILAHYQSPRLVLCLWEKLQKEHQPNCCE 652
BLAST of XM_017375343.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7T652 (Galectin domain-containing protein {ECO:0000259|PROSITE:PS51304})
HSP 1 Score: 890.567 bits (2300), Expect = 0.000e+0
Identity = 425/641 (66.30%), Postives = 511/641 (79.72%), Query Frame = 0
Match: D7T652 (Galectin domain-containing protein {ECO:0000259|PROSITE:PS51304})
HSP 1 Score: 890.567 bits (2300), Expect = 0.000e+0
Identity = 425/641 (66.30%), Postives = 511/641 (79.72%), Query Frame = 0
Query: 1 MKNWSGGVLIVGLGLILLLRYSFVGKQPHKQSAYDFFNSHLSKDST-ESGDSSNTVKTETVQNPEKRPHFVDVEGLDDLYAFRNMSEEESKVLLVWSQMRMLLSRSDALPETFQGIKEAAVSWKELLSLIEKDKSSQLNDNIQND------KKCPYYVGMPSGLNTSTSGSGYILEIPCGLVEDSSVTLIGIPNRGQGNFTIELVASKFPEEQNPPIVLHFNVFLPGENLTKEPIIVQNTWTNETGWGKEERCPNHHSINTTNVDGLAKCNEEVATSAEEEIAHASNLSVNQSSNVSSGSAHVSANFPFSEGSPFTATLWTGVEGFHMSVNGRHETSFEYREKLEPWLINGVRLLGDVEPVSAIAKGLPVSEDLDLIVDVEHLKAPVTAKKRLVLLIGVFSSCNNFNRRMALRRSWMQYDAVRSGEVAVRFFTGLHKNIQVNFQLWKESQAYGDMQLMPFVDYYSLISLKTIAICTMGTKILPAKYIMKTDDDAFVRIDEVLSSLKQKASDGLLYGLISFESKPQRDAENKWFISTEEWPHESYPPWAHGPGYIISRDIAKFIVQAHQKRELKLFKLEDVSMGIWIEKFKERGHEVQYISDERFYNAGCEPNYILAHYQNPRMVLCLWEKLQKEHKPDCCE 634
M+ W GGVLI+ L +ILLL+Y+ +G +P KQ + FF +H + S + DS ++VK + V N K+ H +DVEGLDDLYA N+S+E+SK LLVW+ M LL RSDALPET QGIKEA+ +WK+L S IE+DK+S+ N N Q++ K CP+ V S + + SG ILE PCGLVEDSS+T+IGIP+ G+F +ELV + P E+ PPI+LH+NV LPG+ LT+EP+IVQNTWTNETGWGKEERC H S N VDGL CN+ V S EE + ++ + + +NVSSG AHVSANFPF+EG+PFTATLW G EGFHM+VNGRHETSF YREKLEPWL++GV++ G +E +SA AK LPVSEDLDL VDVEHLKAP ++KRLV+L+GVFS+ NNF RRMALRR+WMQY+AVRSG+VAVRFF GLHKN QVN +LW+E+QAYGD+QLMPFVDYYSLISLKTIA C MGTKILPAKY+MKTDDDAFVRIDEVLSSLK K S+GLLYGLISF+S P RD ++KW IS EEWP ++YPPWAHGPGYIISRDIAKFIVQ HQ+R+L+LFKLEDV+MGIWI++FK + +V YISDERFYN GCE NYILAHYQ PR VLCLWE LQKE KP CCE
Sbjct: 1 MRKWYGGVLIIALAVILLLQYTLMGNRPQKQPPHRFFGNHPANTSKLKDSDSVSSVKEKKVLNHRKKAHLIDVEGLDDLYALNNISKEDSKALLVWAHMYPLLCRSDALPETAQGIKEASSAWKDLWSAIEEDKASKFN-NTQSENGNPEAKDCPFSV---STFDKTVYSSGCILEFPCGLVEDSSITVIGIPDGRNGSFQVELVGLQLPGEREPPILLHYNVSLPGDKLTEEPVIVQNTWTNETGWGKEERCHAHASTNIQKVDGLVLCNQLVVRSTVEENLNMTHPNSDMLTNVSSGRAHVSANFPFAEGNPFTATLWVGSEGFHMTVNGRHETSFTYREKLEPWLVSGVKVAGGLELLSAFAKDLPVSEDLDLAVDVEHLKAPPVSRKRLVMLVGVFSTGNNFERRMALRRTWMQYEAVRSGDVAVRFFIGLHKNRQVNLELWREAQAYGDIQLMPFVDYYSLISLKTIATCIMGTKILPAKYVMKTDDDAFVRIDEVLSSLKGKPSNGLLYGLISFDSAPHRDKDSKWHISAEEWPRDTYPPWAHGPGYIISRDIAKFIVQGHQERDLQLFKLEDVAMGIWIDEFKNKDQQVNYISDERFYNTGCESNYILAHYQGPRKVLCLWEMLQKEQKPICCE 637
BLAST of XM_017375343.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2K1YUC9 (Galectin domain-containing protein {ECO:0000259|PROSITE:PS51304})
HSP 1 Score: 887.871 bits (2293), Expect = 0.000e+0
Identity = 412/638 (64.58%), Postives = 516/638 (80.88%), Query Frame = 0
Match: A0A2K1YUC9 (Galectin domain-containing protein {ECO:0000259|PROSITE:PS51304})
HSP 1 Score: 887.871 bits (2293), Expect = 0.000e+0
Identity = 412/638 (64.58%), Postives = 516/638 (80.88%), Query Frame = 0
Query: 1 MKNWSGGVLIVGLGLILLLRYSFVGKQPHKQSAYDFFNSHLSKDSTESGD---SSNTVKTETVQNPEKRPHFVDVEGLDDLYAFRNMSEEESKVLLVWSQMRMLLSRSDALPETFQGIKEAAVSWKELLSLIEKDKSSQL-NDNIQNDKKCPYYVGMPSGLNTSTSGSGYILEIPCGLVEDSSVTLIGIPNRGQGNFTIELVASKFPEEQNPPIVLHFNVFLPGENLTKEPIIVQNTWTNETGWGKEERCPNHHSINTTNVDGLAKCNEEVATSAEEEIAHASNLSVNQSSNVSSGSAHVSANFPFSEGSPFTATLWTGVEGFHMSVNGRHETSFEYREKLEPWLINGVRLLGDVEPVSAIAKGLPVSEDLDLIVDVEHLKAPVTAKKRLVLLIGVFSSCNNFNRRMALRRSWMQYDAVRSGEVAVRFFTGLHKNIQVNFQLWKESQAYGDMQLMPFVDYYSLISLKTIAICTMGTKILPAKYIMKTDDDAFVRIDEVLSSLKQKASDGLLYGLISFESKPQRDAENKWFISTEEWPHESYPPWAHGPGYIISRDIAKFIVQAHQKRELKLFKLEDVSMGIWIEKFKERGHEVQYISDERFYNAGCEPNYILAHYQNPRMVLCLWEKLQKEHKPDCCE 634
MK WSGGV+I+ L +IL+ YS +G + K+ +YDFF +H + DS + S ++ + K+PH+++VEGL DLYA N+S++ES L+VW QMR+LLSRSDALPET QGI+EA+++WK+LLS I+++K++QL N N DK CPY V S ++ +TS IL+IPCGL EDSS++++GIP+ +F I+L+ S+ P E NPPI+L +NV LPG+N+T+EP +VQNTWT E GWGKEERCP+H S+N VDGL CNE+V S EE +AS++ + S+NVS G AH ANFPF EG+ FTATLW G+EGFHM+VNGRHETSF YREKLEPWL++GV++ G V+ +SA+A+GLPV ED DL+VDVEHLKAP+ +KRLV+LIG+FS+ NNF RRMALRRSWMQY+A RSG+VAVRFF GLHKN QVN +LWKE+ YGD+QLMPFVDYYSLISLKTIAIC MGTKILPAKYIMKTDDDAFVRID+VL+SLK+K S+GLLYG IS +S P RD ++KW+IS EEWPH++YPPWAHGPGYIISRDIAKFIV+ HQ+R+LKLFKLEDV+MGIWIE+FK G EV Y++D+RFYNAGCE +YILAHYQ+PR+VLCLWEKLQKEH+P CCE
Sbjct: 13 MKKWSGGVVIIALAIILVFSYSLMGTRTQKKQSYDFFRNHPAGDSHLKDNHPAKSPQLELKKATKSSKKPHYINVEGLSDLYAQNNISKDESNALVVWFQMRLLLSRSDALPETNQGIREASIAWKDLLSKIKENKAAQLSNINKTEDKNCPYSV---STIDLTTSSGETILDIPCGLAEDSSISVLGIPDGHSRSFQIQLLGSQLPVESNPPIILQYNVSLPGDNMTEEPFVVQNTWTKEYGWGKEERCPSHRSVNIPKVDGLVLCNEKVVRSTMEENGNASSVG-DVSANVSQGIAHERANFPFVEGNAFTATLWVGLEGFHMTVNGRHETSFVYREKLEPWLVSGVKVTGGVDILSALARGLPVPEDNDLVVDVEHLKAPLVTRKRLVMLIGIFSTGNNFERRMALRRSWMQYEAARSGDVAVRFFIGLHKNSQVNLELWKEALVYGDIQLMPFVDYYSLISLKTIAICIMGTKILPAKYIMKTDDDAFVRIDQVLTSLKEKPSNGLLYGRISLDSSPHRDRDSKWYISNEEWPHDAYPPWAHGPGYIISRDIAKFIVRGHQERDLKLFKLEDVAMGIWIEQFKNSGQEVHYMTDDRFYNAGCETDYILAHYQSPRLVLCLWEKLQKEHQPACCE 646
BLAST of XM_017375343.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834LT18 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7146097.1}))
HSP 1 Score: 887.486 bits (2292), Expect = 0.000e+0
Identity = 413/646 (63.93%), Postives = 519/646 (80.34%), Query Frame = 0
Match: A0A834LT18 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7146097.1}))
HSP 1 Score: 887.486 bits (2292), Expect = 0.000e+0
Identity = 413/646 (63.93%), Postives = 519/646 (80.34%), Query Frame = 0
Query: 1 MKNWSGGVLIVGLGLILLLRYSFVGKQPHKQSAYDFFNSHLSKDS-----TESGDSSNTVKTETVQNPEKRPHFVDVEGLDDLYAFRNMSEEESKVLLVWSQMRMLLSRSDALPETFQGIKEAAVSWKELLSLIEKDKSSQL-----NDNIQNDKKCPYYVGMPSGLNTSTSGSGYILEIPCGLVEDSSVTLIGIPNRGQGNFTIELVASKFPEEQNPPIVLHFNVFLPGENLTKEPIIVQNTWTNETGWGKEERCPNHHSINTTNV--DGLAKCNEEVATSAEEEIAHASNLSVNQSSNVSSGSAHVSANFPFSEGSPFTATLWTGVEGFHMSVNGRHETSFEYREKLEPWLINGVRLLGDVEPVSAIAKGLPVSEDLDLIVDVEHLKAPVTAKKRLVLLIGVFSSCNNFNRRMALRRSWMQYDAVRSGEVAVRFFTGLHKNIQVNFQLWKESQAYGDMQLMPFVDYYSLISLKTIAICTMGTKILPAKYIMKTDDDAFVRIDEVLSSLKQKASDGLLYGLISFESKPQRDAENKWFISTEEWPHESYPPWAHGPGYIISRDIAKFIVQAHQKRELKLFKLEDVSMGIWIEKFKERGHEVQYISDERFYNAGCEPNYILAHYQNPRMVLCLWEKLQKEHKPDCCE 634
MK WSG + + LG IL+L YSF GKQP KQSAYDFFN+H S ++ +SS+T N +K+PHFVDVEGLDDLY ++++S+EESK L VW +MR LLSRSDALPET QGIKEAA +WKELL +EK+K+S+ + N+ CPY V S N++ +G +L+IPCGLVEDSS+T+IGIP+ F I+LV S+FP+E PP++LH+NV +PG+NLT+EP+IVQNTW+NE GWGK+ERCP++ S N V DGL KCN++V S ++AS+ N+ +NVS+GSAH S NFPF +G+PF ATLW G+EGFHM+VNGRHETSF Y +KLEPWL+ GV++ G ++ +SA+A+GLPVSED DL++D+E LKAP + K LV+LIG+FS NNF+RRMALRRSWMQY+A+RSG+VAVRFF GLHKN +VNF LWKE QAYGD+QLMPFVDYYSL++LKT+AIC +GT+ILPAKYIMKTDDDAFVRIDEVLSSLK K SDGLLYGL+SF+S P RD +NKW+I TE+WPH YPPWAHGPGY++S+DIA+FIVQ H+KR L LFKLEDV++GIW+++FK++GH+VQYI+DERF+NAGCE NYILAHYQNPR VLCLW+KLQ +HKP+CCE
Sbjct: 1 MKKWSGAMFALALGTILVLCYSFTGKQPRKQSAYDFFNNHPPDKSHVISGSDKVNSSHTEVKRIQSNLKKKPHFVDVEGLDDLYTWKHISKEESKALRVWGKMRSLLSRSDALPETAQGIKEAAFAWKELLYTVEKEKASKFPKTRNSSNVMERTDCPYSV---SVFNSTMYSNGNVLQIPCGLVEDSSITVIGIPDGHGVGFQIDLVGSQFPDEGIPPVILHYNVCMPGDNLTEEPVIVQNTWSNELGWGKDERCPDYGSSNAQKVIVDGLVKCNDQVIRSTVGGNSNASHPDSNKLTNVSAGSAHASDNFPFVDGNPFAATLWVGLEGFHMNVNGRHETSFAYGKKLEPWLVGGVKVAGALDLISALARGLPVSEDFDLVIDIERLKAPPLSSKGLVMLIGIFSIANNFDRRMALRRSWMQYEAIRSGKVAVRFFIGLHKNKEVNFHLWKEVQAYGDIQLMPFVDYYSLLTLKTVAICILGTEILPAKYIMKTDDDAFVRIDEVLSSLKGKVSDGLLYGLVSFDSSPIRDKDNKWYIGTEDWPHALYPPWAHGPGYVVSKDIARFIVQGHRKRALPLFKLEDVAVGIWVDQFKKQGHKVQYITDERFHNAGCESNYILAHYQNPRKVLCLWDKLQNDHKPECCE 643
BLAST of XM_017375343.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2I4E4B9 ((hydroxyproline O-galactosyltransferase GALT3 isoform X1 {ECO:0000313|RefSeq:XP_018814246.2, ECO:0000313|RefSeq:XP_018814247.2}))
HSP 1 Score: 882.093 bits (2278), Expect = 0.000e+0
Identity = 415/638 (65.05%), Postives = 512/638 (80.25%), Query Frame = 0
Match: A0A2I4E4B9 ((hydroxyproline O-galactosyltransferase GALT3 isoform X1 {ECO:0000313|RefSeq:XP_018814246.2, ECO:0000313|RefSeq:XP_018814247.2}))
HSP 1 Score: 882.093 bits (2278), Expect = 0.000e+0
Identity = 415/638 (65.05%), Postives = 512/638 (80.25%), Query Frame = 0
Query: 1 MKNWSGGVLIVGLGLILLLRYSFVGKQPHKQSAYDFFNSHLSKDS--TESGD-SSNTVKTETVQNPEKRPHFVDVEGLDDLYAFRNMSEEESKVLLVWSQMRMLLSRSDALPETFQGIKEAAVSWKELLSLIEKDKSSQL-NDNIQNDKKCPYYVGMPSGLNTSTSGSGYILEIPCGLVEDSSVTLIGIPNRGQGNFTIELVASKFPEEQNPPIVLHFNVFLPGENLTKEPIIVQNTWTNETGWGKEERCPNHHSINTTNVDGLAKCNEEVATSAEEEIAHASNLSVNQSSNVSSGSAHVSANFPFSEGSPFTATLWTGVEGFHMSVNGRHETSFEYREKLEPWLINGVRLLGDVEPVSAIAKGLPVSEDLDLIVDVEHLKAPVTAKKRLVLLIGVFSSCNNFNRRMALRRSWMQYDAVRSGEVAVRFFTGLHKNIQVNFQLWKESQAYGDMQLMPFVDYYSLISLKTIAICTMGTKILPAKYIMKTDDDAFVRIDEVLSSLKQKASDGLLYGLISFESKPQRDAENKWFISTEEWPHESYPPWAHGPGYIISRDIAKFIVQAHQKRELKLFKLEDVSMGIWIEKFKERGHEVQYISDERFYNAGCEPNYILAHYQNPRMVLCLWEKLQKEHKPDCCE 634
MK W GG+ ++ L +IL+LRYS +G QP KQSAY FF +H + +S +SG S+ ++ + V P + V++EGL DLY+ +N+SE+ESK LLVW+ +R LLSRSDALP T +G+KEA+++W +L S IEK+KSS+ N N D+ CPY V + L+ + ILEIPCGLVEDSS+TL+GIP+ G+F IELV S+ E PPI+LHFNV LPG+N+T+EP IVQNTWT+E GWGKEE+CP S+N VDGL CNE++ +A EE ++AS+ S + ++VS G AH SA+FPF EG+PFTATLW G+EGFHM+V+GRHETSF YREKLEPW ++ V + G ++ +SA AKGLPVSED DL++DVEHLKAP ++KR V+L+GVFS+ NNF RRMALRRSWMQY+AVRSG+VAVRFF GLHKN QVNF+LW+E+QAYGD+QLMPFVDYYSLI+LKTIAIC MGTK+LPAKYIMKTDDDAFVRIDEVLSSLK KA +GLLYGLISFES P RD ++KW+ISTEEWPH SYPPWAHGPGYIISRDIAKFIV+ HQ+R LKLFKLEDV+MGIWIE++K G EV YI+D+RF+NAGCE +Y+LAHYQ PR VLCLWE LQKEH+ CCE
Sbjct: 1 MKKWFGGMFVLALVMILVLRYSLMGIQPKKQSAYSFFKNHPANESQKKDSGSIRSSEMQVKKVAKPSIKTPLVNIEGLSDLYSSKNLSEKESKALLVWAHLRTLLSRSDALPGTAEGVKEASIAWNDLSSTIEKEKSSKYSNTNGSKDRNCPYSVSI---LDQTALNGVVILEIPCGLVEDSSITLVGIPDGHHGSFQIELVGSQLSAEPTPPIILHFNVSLPGDNMTEEPFIVQNTWTSEAGWGKEEKCPARRSVNIVKVDGLVLCNEQIVRNAVEENSNASHPSSDMLNSVSRGVAHGSASFPFVEGNPFTATLWVGIEGFHMTVSGRHETSFAYREKLEPWSVSRVNVAGGLDLLSAFAKGLPVSEDNDLVIDVEHLKAPSVSRKRCVMLVGVFSTGNNFERRMALRRSWMQYEAVRSGDVAVRFFVGLHKNNQVNFELWREAQAYGDVQLMPFVDYYSLIALKTIAICIMGTKVLPAKYIMKTDDDAFVRIDEVLSSLKGKAVNGLLYGLISFESAPHRDKDSKWYISTEEWPHASYPPWAHGPGYIISRDIAKFIVRGHQERGLKLFKLEDVAMGIWIEQYKNSGQEVHYINDDRFFNAGCEQDYVLAHYQGPRKVLCLWEMLQKEHRAICCE 635
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7BZN1 | E-Value: 0.000e+0, PID: 70.76 | (Putative beta-1,3-galactosyltransferase 16 {ECO:0... [more] |
| A0A2R6PWL0 | E-Value: 0.000e+0, PID: 68.63 | (Hydroxyproline O-galactosyltransferase {ECO:00003... [more] |
| A0A7J0GLD7 | E-Value: 0.000e+0, PID: 68.63 | (Galactosyltransferase family protein {ECO:0000313... [more] |
| A0A7J7GPT3 | E-Value: 0.000e+0, PID: 69.20 | Galectin domain-containing protein {ECO:0000259|PR... [more] |
| A0A067JZG7 | E-Value: 0.000e+0, PID: 67.08 | Galectin domain-containing protein {ECO:0000259|PR... [more] |
| A0A2C9WAY6 | E-Value: 0.000e+0, PID: 66.93 | Galectin domain-containing protein {ECO:0000259|PR... [more] |
| D7T652 | E-Value: 0.000e+0, PID: 66.30 | Galectin domain-containing protein {ECO:0000259|PR... [more] |
| A0A2K1YUC9 | E-Value: 0.000e+0, PID: 64.58 | Galectin domain-containing protein {ECO:0000259|PR... [more] |
| A0A834LT18 | E-Value: 0.000e+0, PID: 63.93 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7146... [more] |
| A0A2I4E4B9 | E-Value: 0.000e+0, PID: 65.05 | (hydroxyproline O-galactosyltransferase GALT3 isof... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |