Resource Type:
Polypeptide
Name:
XM_017373722.1
Identifier:
XM_017373722.1-protein
Sequence:
MNSLILILDKILGFYFEEIRTSFGCCWEMESCDCFETHWPPDDLLVKYQY
ISDFFISFAYFSIPLELIYFVQKAAFFPYRWVLVLFGAFIVLCGATHFIS
LWTYSVHSKTVVIVMTVAKMSTAFVSCVTALTLVHIIPDLLSVKKREMFL
RKKAEALDWERGLIIKQEETGRHVRMLTHEIRSTLDRNTILKTTLVELGR
TLDLEECALWMPSQRGSSLQLSYSLNNLIPFGSTLPINLPIVNEVFNSAD
AIRIPHTCPLVGIKTHVGTYVPPEVVAVRVPLLHLSDFEVNEWPEIPAKR
YAVMVLILPLNGVRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQ
LMEQNVALDLARQEAEMAIRARNDFLAVMNHEMGTPMHAVITLSSLLLET
ELTPDQRMMIETVLKSGNLLAALINDVLDLSRLEDGSLELDNKIFNLHDV
FRESMNLINPVASVKNLSTNLTLGIDLPVHAVGDGKWLMQTILNVVGNAV
KFTKEGYISVEASVAKPEYYKYLGNPEFVPMSSDNHFYLLVQVKDSGCGI
SPQDLPLLFTKFLESGNASSRSNSGTGLGLAICRRFLNLMGGHIWIESEG
PGKGSKVAFIVRLGLCNNASEPTIQQTVMQGRAHRGSGDLIGHRLFSRDD
YIATYIPRNQRSF
Sequence Length:
663
Sequence Checksum:
ced0e92f202ebe851638accd6bee42cd
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017373722.1, derives from mRNA, XM_017373722.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017373722.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017373722.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6P5S0 ((Ethylene response sensor like {ECO:0000313|EMBL:PSR85974.1}))
HSP 1 Score: 1012.68 bits (2617), Expect = 0.000e+0
Identity = 479/637 (75.20%), Postives = 557/637 (87.44%), Query Frame = 0
Match: A0A2R6P5S0 ((Ethylene response sensor like {ECO:0000313|EMBL:PSR85974.1}))
HSP 1 Score: 1012.68 bits (2617), Expect = 0.000e+0
Identity = 479/637 (75.20%), Postives = 557/637 (87.44%), Query Frame = 0
Query: 27 WEMESCDCFETHWPPDDLLVKYQYISDFFISFAYFSIPLELIYFVQKAAFFPYRWVLVLFGAFIVLCGATHFISLWTYSVHSKTVVIVMTVAKMSTAFVSCVTALTLVHIIPDLLSVKKREMFLRKKAEALDWERGLIIKQEETGRHVRMLTHEIRSTLDRNTILKTTLVELGRTLDLEECALWMPSQRGSSLQLSYSLNNLIPFGSTLPINLPIVNEVFNSADAIRIPHTCPLVGIKTHVGTYVPPEVVAVRVPLLHLSDFEVNEWPEIPAKRYAVMVLILPLNGVRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEMGTPMHAVITLSSLLLETELTPDQRMMIETVLKSGNLLAALINDVLDLSRLEDGSLELDNKIFNLHDVFRESMNLINPVASVKNLSTNLTLGIDLPVHAVGDGKWLMQTILNVVGNAVKFTKEGYISVEASVAKPEYYKYLGNPEFVPMSSDNHFYLLVQVKDSGCGISPQDLPLLFTKFLESGNASSRSNSGTGLGLAICRRFLNLMGGHIWIESEGPGKGSKVAFIVRLGLCNNASEPTIQQTVMQGRAHRGSGDLIGHRLFSRDDYIATYIPRNQRSF 663
W+MESCDC ET WP D+LLVKYQYISDFFI+FAYFSIPLELIYFVQK+AFFPYRWVL+ FGAFIVLCGATHFI+LWT+S+HSKTV IVMT+AK++TA VSC TAL LVHIIPDLLSVK+RE+ L+ KAE LD E GLI+ QEETGRHVRMLTHEIRSTLDR+TILKTTLVELGRTLDLEECALWMPS+RG LQLS++LNNLIP GS++P NLPIVNEVFNSA+AIRIPHTCPL IK +G YVPPEVVAVRVPLLHLS+F++N+WP+ AK YA+MVLILP++G+RKWRDHELELVEVVADQVAVALSHAAILEESMRARDQL+EQNVALD ARQEAEMAIRARNDFLAVMNHEM TPMHA+I+LS+LLLETELTP+QR+MIET+LKS NLLA LINDVLDLSRLEDGSLEL+N +FNLH++FR+ ++LI P+ASVK LS L LG DLPV+AVGD K L+QTILN+ GNAVKFTK+G++S+ AS+AKPE + PEF P+S D HF+L VQVKD+GCGI+P+D+PL FTKF +S + SSR+N G GLGLAIC RF+NLMGGHIWIESEGP KG+ V F+ +LG+CN+ +E T+QQ + GRA++GS +LIGH+ F RD PR QRS
Sbjct: 5 WKMESCDCIETQWPADELLVKYQYISDFFIAFAYFSIPLELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSMHSKTVAIVMTIAKIATAVVSCATALMLVHIIPDLLSVKRRELLLKNKAEELDREMGLIMSQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLDLEECALWMPSRRGLDLQLSHTLNNLIPIGSSVPSNLPIVNEVFNSAEAIRIPHTCPLARIKPRMGRYVPPEVVAVRVPLLHLSNFQINDWPDSSAKSYALMVLILPMDGIRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLLEQNVALDFARQEAEMAIRARNDFLAVMNHEMRTPMHAIISLSALLLETELTPEQRVMIETILKSSNLLATLINDVLDLSRLEDGSLELENGVFNLHEIFRQVVDLIRPIASVKKLSMTLILGPDLPVYAVGDEKRLIQTILNIAGNAVKFTKKGFVSIVASIAKPESLRDWRPPEFYPVSGDAHFFLRVQVKDTGCGINPEDIPLSFTKFAQSRSGSSRNNGGAGLGLAICNRFINLMGGHIWIESEGPDKGTTVTFLAKLGICNSPNESTMQQIALAGRANQGSANLIGHKPFPRD------FPRYQRSL 635
BLAST of XM_017373722.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0H8E6 ((Ethylene response sensor 1 {ECO:0000313|EMBL:GFZ19377.1}))
HSP 1 Score: 1008.44 bits (2606), Expect = 0.000e+0
Identity = 474/623 (76.08%), Postives = 552/623 (88.60%), Query Frame = 0
Match: A0A7J0H8E6 ((Ethylene response sensor 1 {ECO:0000313|EMBL:GFZ19377.1}))
HSP 1 Score: 1008.44 bits (2606), Expect = 0.000e+0
Identity = 474/623 (76.08%), Postives = 552/623 (88.60%), Query Frame = 0
Query: 27 WEMESCDCFETHWPPDDLLVKYQYISDFFISFAYFSIPLELIYFVQKAAFFPYRWVLVLFGAFIVLCGATHFISLWTYSVHSKTVVIVMTVAKMSTAFVSCVTALTLVHIIPDLLSVKKREMFLRKKAEALDWERGLIIKQEETGRHVRMLTHEIRSTLDRNTILKTTLVELGRTLDLEECALWMPSQRGSSLQLSYSLNNLIPFGSTLPINLPIVNEVFNSADAIRIPHTCPLVGIKTHVGTYVPPEVVAVRVPLLHLSDFEVNEWPEIPAKRYAVMVLILPLNGVRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEMGTPMHAVITLSSLLLETELTPDQRMMIETVLKSGNLLAALINDVLDLSRLEDGSLELDNKIFNLHDVFRESMNLINPVASVKNLSTNLTLGIDLPVHAVGDGKWLMQTILNVVGNAVKFTKEGYISVEASVAKPEYYKYLGNPEFVPMSSDNHFYLLVQVKDSGCGISPQDLPLLFTKFLESGNASSRSNSGTGLGLAICRRFLNLMGGHIWIESEGPGKGSKVAFIVRLGLCNNASEPTIQQTVMQGRAHRGSGDLIGHRLFSRD 649
W+MESCDC ET WP D+LLVKYQYISDFFI+FAYFSIPLELIYFVQK+AFFPYRWVL+ FGAFIVLCGATHFI+LWT+S+HSKTV IVMT+AK++TA VSC TAL LVHIIPDLLSVK+RE+ L+ KAE LD E GLI+ QEETGRHVRMLTHEIRSTLDR+TILKTTLVELGRTLDLEECALWMPS+RG LQLS++LNNLIP GS++P NLPIVNEVFNSA+AIRIPHTCPL IK +G YVP EVVAVRVPLLHLS+F++N+WP+ AK YA+MVLILP++G+RKWRDHELELVEVVADQVAVALSHAAILEESMRARDQL+EQNVALD ARQEAEMAIRARNDFLAVMNHEM TPMHA+I+LS+LLLETELTP+QR+MIET+LKS NLLA LINDVLDLSRLEDGSLEL+N +FNLH++FR+ ++LI P+ASVK LS L LG DLPV+AVGD K L+QTILN+VGNAVKFTK+G++S+ AS+AKPE + PEF P+S D HF+L VQVKD+GCGI+P+D+PL FTKF +S + SSR+N G GLGLAIC RF+NLMGGHIWIESEGP KG+ V F+ +LG+CN+ +E T+QQ + GRA++GS +LIGH+ F RD
Sbjct: 5 WKMESCDCIETQWPADELLVKYQYISDFFIAFAYFSIPLELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSMHSKTVAIVMTIAKIATAVVSCATALMLVHIIPDLLSVKRRELLLKNKAEELDREMGLIMSQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLDLEECALWMPSRRGLDLQLSHTLNNLIPIGSSVPSNLPIVNEVFNSAEAIRIPHTCPLARIKPRMGRYVPSEVVAVRVPLLHLSNFQINDWPDTSAKSYALMVLILPMDGIRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLLEQNVALDFARQEAEMAIRARNDFLAVMNHEMRTPMHAIISLSALLLETELTPEQRVMIETILKSSNLLATLINDVLDLSRLEDGSLELENGVFNLHEIFRQVVDLIRPIASVKKLSMTLILGPDLPVYAVGDEKRLIQTILNIVGNAVKFTKKGFVSIVASIAKPESLRDWRPPEFYPVSGDAHFFLRVQVKDTGCGINPEDIPLSFTKFAQSRSGSSRNNGGAGLGLAICNRFINLMGGHIWIESEGPDKGTTVTFLAKLGICNSPNESTMQQIALAGRANQGSANLIGHKPFPRD 627
BLAST of XM_017373722.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: B3FIA8 ((Ethylene receptor ERS1b {ECO:0000313|EMBL:ABY28263.1}))
HSP 1 Score: 1006.13 bits (2600), Expect = 0.000e+0
Identity = 478/635 (75.28%), Postives = 555/635 (87.40%), Query Frame = 0
Match: B3FIA8 ((Ethylene receptor ERS1b {ECO:0000313|EMBL:ABY28263.1}))
HSP 1 Score: 1006.13 bits (2600), Expect = 0.000e+0
Identity = 478/635 (75.28%), Postives = 555/635 (87.40%), Query Frame = 0
Query: 29 MESCDCFETHWPPDDLLVKYQYISDFFISFAYFSIPLELIYFVQKAAFFPYRWVLVLFGAFIVLCGATHFISLWTYSVHSKTVVIVMTVAKMSTAFVSCVTALTLVHIIPDLLSVKKREMFLRKKAEALDWERGLIIKQEETGRHVRMLTHEIRSTLDRNTILKTTLVELGRTLDLEECALWMPSQRGSSLQLSYSLNNLIPFGSTLPINLPIVNEVFNSADAIRIPHTCPLVGIKTHVGTYVPPEVVAVRVPLLHLSDFEVNEWPEIPAKRYAVMVLILPLNGVRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEMGTPMHAVITLSSLLLETELTPDQRMMIETVLKSGNLLAALINDVLDLSRLEDGSLELDNKIFNLHDVFRESMNLINPVASVKNLSTNLTLGIDLPVHAVGDGKWLMQTILNVVGNAVKFTKEGYISVEASVAKPEYYKYLGNPEFVPMSSDNHFYLLVQVKDSGCGISPQDLPLLFTKFLESGNASSRSNSGTGLGLAICRRFLNLMGGHIWIESEGPGKGSKVAFIVRLGLCNNASEPTIQQTVMQGRAHRGSGDLIGHRLFSRDDYIATYIPRNQRSF 663
MESCDC ET WP D+LLVKYQYISDFFI+FAYFSIPLELIYFVQK+AFFPYRWVL+ FGAFIVLCGATHFI+LWT+S+HSKTV IVMT+AK++TA VSC TAL LVHIIPDLLSVK+RE+ + KAE LD E GLI+ QEETGRHVRMLTHEIRSTLDR+TILKTTLVELGRTLDLEECALWMPS+RG LQLS++LNNLIP GS++P NLPIVNEVFNSA+AIRIP+TCPL IK H+G YVPPEVVAVRVPLLHLS+F++N+WP++ AK YA+MVLILP++G+RKWRDHELELVEVVADQVAVALSHAAILEESMRARDQL+EQNVALD ARQEAEMAIRARNDFLAVMNHEM TPMHA+I+LS+LLLETELTP+QR+MIET+LKS NLLA LINDVLDLSRLEDGSLEL+N +FNLH++FR+ ++LI P+ASVK LS L LG DLPV+AVGD K L+QTILN+ GNAVKFTKEG++S+ AS+AKPE + PEF P+S D HF+L VQVKD+GCGI+P+D+PL FTKF +S + SSR+N G GLGLAIC RF+NLMGGHIWIESEGP KG V F+ +LG+CN+ +E T+QQ + GRA++GS +LIGH+ F RD PR QRS
Sbjct: 1 MESCDCIETQWPADELLVKYQYISDFFIAFAYFSIPLELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSMHSKTVAIVMTIAKIATAVVSCATALMLVHIIPDLLSVKRRELLWKNKAEELDREMGLIMSQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLDLEECALWMPSRRGLDLQLSHTLNNLIPIGSSVPSNLPIVNEVFNSAEAIRIPYTCPLARIKPHMGRYVPPEVVAVRVPLLHLSNFQINDWPDLSAKSYALMVLILPMDGIRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLLEQNVALDFARQEAEMAIRARNDFLAVMNHEMRTPMHAIISLSALLLETELTPEQRVMIETILKSSNLLATLINDVLDLSRLEDGSLELENGVFNLHEIFRQVVDLIRPIASVKKLSMTLILGPDLPVYAVGDEKRLIQTILNIAGNAVKFTKEGFVSIVASIAKPESLRDWRPPEFYPVSGDAHFFLRVQVKDTGCGINPEDIPLSFTKFAQSRSGSSRNNGGAGLGLAICNRFINLMGGHIWIESEGPDKGITVTFLAKLGICNSPNESTMQQIALAGRANQGSANLIGHKPFPRD------FPRYQRSL 629
BLAST of XM_017373722.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0G1B7 ((Ethylene response sensor 1 {ECO:0000313|EMBL:GFZ04569.1}))
HSP 1 Score: 999.194 bits (2582), Expect = 0.000e+0
Identity = 475/635 (74.80%), Postives = 554/635 (87.24%), Query Frame = 0
Match: A0A7J0G1B7 ((Ethylene response sensor 1 {ECO:0000313|EMBL:GFZ04569.1}))
HSP 1 Score: 999.194 bits (2582), Expect = 0.000e+0
Identity = 475/635 (74.80%), Postives = 554/635 (87.24%), Query Frame = 0
Query: 29 MESCDCFETHWPPDDLLVKYQYISDFFISFAYFSIPLELIYFVQKAAFFPYRWVLVLFGAFIVLCGATHFISLWTYSVHSKTVVIVMTVAKMSTAFVSCVTALTLVHIIPDLLSVKKREMFLRKKAEALDWERGLIIKQEETGRHVRMLTHEIRSTLDRNTILKTTLVELGRTLDLEECALWMPSQRGSSLQLSYSLNNLIPFGSTLPINLPIVNEVFNSADAIRIPHTCPLVGIKTHVGTYVPPEVVAVRVPLLHLSDFEVNEWPEIPAKRYAVMVLILPLNGVRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEMGTPMHAVITLSSLLLETELTPDQRMMIETVLKSGNLLAALINDVLDLSRLEDGSLELDNKIFNLHDVFRESMNLINPVASVKNLSTNLTLGIDLPVHAVGDGKWLMQTILNVVGNAVKFTKEGYISVEASVAKPEYYKYLGNPEFVPMSSDNHFYLLVQVKDSGCGISPQDLPLLFTKFLESGNASSRSNSGTGLGLAICRRFLNLMGGHIWIESEGPGKGSKVAFIVRLGLCNNASEPTIQQTVMQGRAHRGSGDLIGHRLFSRDDYIATYIPRNQRSF 663
MESCDC ET WP D+LLVKYQYISDFFI+FAYFSIPLELIYFVQK+AFFPYRWVL+ FGAFIVLCGATHFI+LWT+S+HSKTV IVMT+AK++TA VSC TAL LVHIIPDLLSVK+RE+ L+ KAE LD E GLI+ QEETGRHVRMLTHEIRSTLDR+TILKTTLVELGRTLDLEECALWMPS+RG +LQLS++LNN IP GS++ NLPIVNEVFNSA+AIRIPHTCPL IK VG YVPPEVVAVRVPLLHLS+F++N+WP++ AK YA+MVLILP++G+RKWRDHELELVEVVADQVAVALSHAAILEESMRAR+QLMEQNVALDLARQEAEMAIRARNDFLAVMNHEM TPMHA+I+LS+LLLETELTP+QR+MIET+LKS NLLA LINDVLDLSRLEDGSLEL+N +FNLH++FR+ ++LI P+ASVK LS L LG DLPV+AVGD K L+QTILN+ GNAVKFTK+G++S+ AS+AKPE + PEF P+S D+HF+L VQVKD+GCGI+ +D+PL FTKF +S + SSR+N G GLGLA+C RF+NLMGGHIWIESEG KG+ V F+ +LG+CN+ +E T+QQ + GRA++GS DLIGH+ F D PR QRS
Sbjct: 1 MESCDCIETQWPADELLVKYQYISDFFIAFAYFSIPLELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSMHSKTVAIVMTIAKIATAVVSCATALMLVHIIPDLLSVKRRELLLKNKAEELDREMGLIMSQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLDLEECALWMPSRRGLNLQLSHTLNNQIPIGSSVSSNLPIVNEVFNSAEAIRIPHTCPLARIKPRVGRYVPPEVVAVRVPLLHLSNFQINDWPDLSAKSYALMVLILPMDGIRKWRDHELELVEVVADQVAVALSHAAILEESMRAREQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEMRTPMHAIISLSALLLETELTPEQRVMIETILKSSNLLATLINDVLDLSRLEDGSLELENGVFNLHELFRQVVDLIRPIASVKKLSMTLILGPDLPVYAVGDEKRLIQTILNIAGNAVKFTKKGFVSIVASIAKPESLRDWRPPEFYPVSGDSHFFLRVQVKDTGCGINQEDIPLSFTKFAQSRSGSSRNNGGAGLGLAVCNRFINLMGGHIWIESEGSDKGTTVTFLAKLGICNSPNESTMQQIALAGRANQGSADLIGHKPFPID------FPRYQRSL 629
BLAST of XM_017373722.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PDU2 ((Ethylene response sensor like {ECO:0000313|EMBL:PSR89530.1}))
HSP 1 Score: 996.882 bits (2576), Expect = 0.000e+0
Identity = 474/635 (74.65%), Postives = 552/635 (86.93%), Query Frame = 0
Match: A0A2R6PDU2 ((Ethylene response sensor like {ECO:0000313|EMBL:PSR89530.1}))
HSP 1 Score: 996.882 bits (2576), Expect = 0.000e+0
Identity = 474/635 (74.65%), Postives = 552/635 (86.93%), Query Frame = 0
Query: 29 MESCDCFETHWPPDDLLVKYQYISDFFISFAYFSIPLELIYFVQKAAFFPYRWVLVLFGAFIVLCGATHFISLWTYSVHSKTVVIVMTVAKMSTAFVSCVTALTLVHIIPDLLSVKKREMFLRKKAEALDWERGLIIKQEETGRHVRMLTHEIRSTLDRNTILKTTLVELGRTLDLEECALWMPSQRGSSLQLSYSLNNLIPFGSTLPINLPIVNEVFNSADAIRIPHTCPLVGIKTHVGTYVPPEVVAVRVPLLHLSDFEVNEWPEIPAKRYAVMVLILPLNGVRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEMGTPMHAVITLSSLLLETELTPDQRMMIETVLKSGNLLAALINDVLDLSRLEDGSLELDNKIFNLHDVFRESMNLINPVASVKNLSTNLTLGIDLPVHAVGDGKWLMQTILNVVGNAVKFTKEGYISVEASVAKPEYYKYLGNPEFVPMSSDNHFYLLVQVKDSGCGISPQDLPLLFTKFLESGNASSRSNSGTGLGLAICRRFLNLMGGHIWIESEGPGKGSKVAFIVRLGLCNNASEPTIQQTVMQGRAHRGSGDLIGHRLFSRDDYIATYIPRNQRSF 663
MESCDC ET WP D+LLVKYQYISDFFI+FAYFSIPLELIYFVQK+AFFPYRWVL+ FGAFIVLCGATHFI+LWT+S+HSKTV IVMT+AK++TA VSC TAL LVHIIPDLLSVK+RE+ L+ KAE LD E GLI+ QEETGRHVRMLTHEIRSTLDR+TILKTTLVELGRTLDLEECALWMPS+RG +LQLS++LNN IP GS++ NLPIVNEVFNSA+AIRIPHTCPL I VG YVPPEVVAVRVPLLHLS+F++N+WP++ AK YA+MVLILP++G+RKW DHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEM TPMHA+I+LS+LLLETELTP+QR+MIET+LKS NLLA LINDVLDLSRLEDGSLEL+N +FNLH++FR+ ++LI P+ASVK LS L LG DLPV+AVGD K L+QTILN+ GNAVKFTK+G++S+ AS+AKPE + PEF P+S D+HF+L VQVKD+GCGI+P+D+PL FTKF +S + SS +N G GLGLA+C RF+NLMGGHIWIESEG KG+ V F+ +LG+CN+ +E T+QQ + GRA++GS DLIGH+ F D PR QRS
Sbjct: 1 MESCDCIETQWPADELLVKYQYISDFFIAFAYFSIPLELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSMHSKTVAIVMTIAKIATAVVSCATALMLVHIIPDLLSVKRRELLLKNKAEELDREMGLIMSQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLDLEECALWMPSRRGLNLQLSHTLNNQIPIGSSVSSNLPIVNEVFNSAEAIRIPHTCPLARITPRVGRYVPPEVVAVRVPLLHLSNFQINDWPDLSAKSYALMVLILPMDGIRKWHDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEMRTPMHAIISLSALLLETELTPEQRVMIETILKSSNLLATLINDVLDLSRLEDGSLELENGVFNLHEIFRQVVDLIRPIASVKKLSMTLILGPDLPVYAVGDEKRLIQTILNIAGNAVKFTKKGFVSIVASIAKPESLRDWRPPEFYPVSGDSHFFLRVQVKDTGCGINPEDIPLSFTKFAQSKSGSSLNNGGAGLGLAVCNRFINLMGGHIWIESEGSDKGTTVTFLAKLGICNSPNESTMQQIALAGRANQGSADLIGHKPFPID------FPRYQRSL 629
BLAST of XM_017373722.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6YNZ4 ((Putative ethylene receptor ERS1b {ECO:0000313|EMBL:MPA33547.1}) (2.7.13.- {ECO:0000313|EMBL:MPA33547.1}))
HSP 1 Score: 976.852 bits (2524), Expect = 0.000e+0
Identity = 493/634 (77.76%), Postives = 547/634 (86.28%), Query Frame = 0
Match: A0A5B6YNZ4 ((Putative ethylene receptor ERS1b {ECO:0000313|EMBL:MPA33547.1}) (2.7.13.- {ECO:0000313|EMBL:MPA33547.1}))
HSP 1 Score: 976.852 bits (2524), Expect = 0.000e+0
Identity = 493/634 (77.76%), Postives = 547/634 (86.28%), Query Frame = 0
Query: 31 SCDCFETHWPPDDLLVKYQYISDFFISFAYFSIPLELIYFVQKAAFFPYRWVLVLFGAFIVLCGATHFISLWTYSVHSKTVVIVMTVAKMSTAFVSCVTALTLVHIIPDLLSVKKREMFLRKKAEALDWERGLIIKQEETGRHVRMLTHEIRSTLDRNTILKTTLVELGRTLDLEECALWMPSQRGSSLQLSYSLNNLIPFGSTLPINLPIVNEVFNSADAIRIPHTCPLVGIKTHVGTYVPPEVVAVRVPLLHLSDFEVNEWPEIPAKRYAVMVLILPLNGVRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEMGTPMHAVITLSSLLLETELTPDQRMMIETVLKSGNLLAALINDVLDLSRLEDGSLELDNKIFNLHDVFRESMNLINPVASVKNLSTNLTLGIDLPVHAVGDGKWLMQTILNVVGNAVKFTKEGYISVEASVAKPEYYKYLGNPEFVPMSSDNHFYLLVQVKDSGCGISPQDLPLLFTKFLESGNASSRSNSGTGLGLAICRRFLNLMGGHIWIESEGPGKGSKVAFIVRLGLCNNASEPTIQQTVMQGRAHRGSGDLIGHR-LFSRDDYIATYIPRNQRSF 663
SCDC ET WP D+LLVKYQYISDF I+FAYFSIPLELIYFVQK+AFFPYRWVL+ FGAFIVLCGATH I+LWT+S+HSKTV +VMTVAK++TAFVSCVTAL LVHIIPDLLSVK RE+FL+ KAE LD E GLIIKQEETGRHVRMLTHEIRSTLDR+ IL TTL ELGRTLDL+ECALWMPSQRG +LQLS++LNNLI GST+PINLPIVNEVFNSA+AIRIPHTCPL I+ VG Y PPEVVAVRVPLLHLS+F +N+W ++ AK YAVMVLILP++GVRKWRDHELELVEVVADQVAVALSHAAILEESM ARDQLM+QNVALDLARQEAEMAIRARNDFLAVMNHEM TPMHA I LSSLLLETELTP+QR+MIETVLKS NLLA LINDVLDLSRLEDGSLELD FNL VFRE +NLI P+ASVK LS NL LG D+PV+AVGD K LMQTILN+VGNAVKFTKEG + V ASV +PE + PEF P+SSD HFYL VQVKDSGCGI PQD+PLLFTKF +S +ASSR+N G GLGLAIC+RF+NLM GHIWIESEG KGS V FIV+LG+CNN +E T+Q +GRA++GS DLI H+ L DD IA+ IPR QRS
Sbjct: 5 SCDCIETQWPADELLVKYQYISDFLIAFAYFSIPLELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHLINLWTFSMHSKTVAVVMTVAKIATAFVSCVTALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLIIKQEETGRHVRMLTHEIRSTLDRHIILTTTLDELGRTLDLQECALWMPSQRGLNLQLSHTLNNLI-VGSTVPINLPIVNEVFNSAEAIRIPHTCPLARIRPPVGRYNPPEVVAVRVPLLHLSNFLINDWSDVSAKSYAVMVLILPMDGVRKWRDHELELVEVVADQVAVALSHAAILEESMHARDQLMDQNVALDLARQEAEMAIRARNDFLAVMNHEMRTPMHATIALSSLLLETELTPEQRVMIETVLKSSNLLATLINDVLDLSRLEDGSLELDTGTFNLQGVFREVINLIKPIASVKKLSMNLFLGPDVPVYAVGDEKRLMQTILNIVGNAVKFTKEGSVLVVASVTRPESLRDWRPPEFHPVSSDGHFYLRVQVKDSGCGIIPQDIPLLFTKFTQSRSASSRNNGGAGLGLAICKRFVNLMEGHIWIESEGLNKGSTVTFIVKLGICNNQNESTVQLVAPRGRANQGSADLIRHKPLIKDDDGIASSIPRYQRSL 637
BLAST of XM_017373722.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: D7U2C9 (Histidine kinase domain-containing protein {ECO:0000259|PROSITE:PS50109})
HSP 1 Score: 971.459 bits (2510), Expect = 0.000e+0
Identity = 472/636 (74.21%), Postives = 536/636 (84.28%), Query Frame = 0
Match: D7U2C9 (Histidine kinase domain-containing protein {ECO:0000259|PROSITE:PS50109})
HSP 1 Score: 971.459 bits (2510), Expect = 0.000e+0
Identity = 472/636 (74.21%), Postives = 536/636 (84.28%), Query Frame = 0
Query: 29 MESCDCFETHWPPDDLLVKYQYISDFFISFAYFSIPLELIYFVQKAAFFPYRWVLVLFGAFIVLCGATHFISLWTYSVHSKTVVIVMTVAKMSTAFVSCVTALTLVHIIPDLLSVKKREMFLRKKAEALDWERGLIIKQEETGRHVRMLTHEIRSTLDRNTILKTTLVELGRTLDLEECALWMPSQRGSSLQLSYSLNNLIPFGSTLPINLPIVNEVFNSADAIRIPHTCPLVGIKTHVGTYVPPEVVAVRVPLLHLSDFEVNEWPEIPAKRYAVMVLILPLNGVRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEMGTPMHAVITLSSLLLETELTPDQRMMIETVLKSGNLLAALINDVLDLSRLEDGSLELDNKIFNLHDVFRESMNLINPVASVKNLSTNLTLGIDLPVHAVGDGKWLMQTILNVVGNAVKFTKEGYISVEASVAKPEYYKYLGNPEFVPMSSDNHFYLLVQVKDSGCGISPQDLPLLFTKFLESGNASSRSNSGTGLGLAICRRFLNLMGGHIWIESEGPGKGSKVAFIVRLGLCNNASEPTIQQTVMQGRAHRGSGDLIGHR-LFSRDDYIATYIPRNQRSF 663
MESCDCF+T WP D+LLVKYQYISDFFI+ AYFSIPLELIYFVQK+AFFPYRWVL+ FGAFIVLCGATH I+LW +S+HSKTV +VMT+AK+STA VSC TAL LVHIIPDLLSVK RE L+ KAE LD E GLI+KQEETGRHVRMLTHEIRSTLDR+TILKTTLVELGRTL LEECALWMPS+ G +LQLS++L+N IP G + INLP+VNEVFNSA+AIRIP++CPL I+ VG Y PP+VVAVRVPLLHLS+F++N+WPE+ AK YAVMVLILP + RKWR+HELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLAR+EAE AI ARNDFLAVMNHEM TPMHA+I LSS LLETELTP+QR MIETVLKS NLLA LINDVLDLSRLEDGSLELD FNLH V RE +NLI P++S+K LS L L DLP AVGD K LMQT+LNV GNAVKFTKEGY+SV ASVAKPE + PEF P+ SD HFYL VQ+KDSGCGI+PQD+PLLFTKF +S N S+R+NSG GLGLAIC+RF++LMGGHIWIESEGP KG V F+V+LG+ NN +EP+ Q V +GR + GS DL GHR +F + +A+ PR QRS
Sbjct: 1 MESCDCFDTQWPADELLVKYQYISDFFIALAYFSIPLELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHLINLWMFSMHSKTVAVVMTIAKISTAVVSCATALMLVHIIPDLLSVKTREHLLKNKAEELDREMGLIMKQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGMTLQLSHTLSNQIPVGKDVQINLPMVNEVFNSAEAIRIPYSCPLARIRPIVGKYGPPDVVAVRVPLLHLSNFQINDWPELSAKSYAVMVLILPSDSGRKWREHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARREAETAIHARNDFLAVMNHEMRTPMHAIIALSSFLLETELTPEQRAMIETVLKSSNLLATLINDVLDLSRLEDGSLELDIGTFNLHAVLREVVNLIKPISSIKKLSMTLILAPDLPECAVGDEKRLMQTLLNVTGNAVKFTKEGYVSVIASVAKPETLRDWRTPEFYPVPSDGHFYLRVQIKDSGCGITPQDIPLLFTKFAQSRNGSNRTNSGVGLGLAICKRFVSLMGGHIWIESEGPDKGCTVTFVVKLGIGNNPNEPSAQAAVPRGRTNHGSADLAGHRPVFRENARVASPFPRYQRSL 636
BLAST of XM_017373722.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4LY95 (Histidine kinase domain-containing protein {ECO:0000259|PROSITE:PS50109} (Fragment))
HSP 1 Score: 969.918 bits (2506), Expect = 0.000e+0
Identity = 472/640 (73.75%), Postives = 556/640 (86.88%), Query Frame = 0
Match: A0A6A4LY95 (Histidine kinase domain-containing protein {ECO:0000259|PROSITE:PS50109} (Fragment))
HSP 1 Score: 969.918 bits (2506), Expect = 0.000e+0
Identity = 472/640 (73.75%), Postives = 556/640 (86.88%), Query Frame = 0
Query: 24 GCCWEMESCDCFETHWPPDDLLVKYQYISDFFISFAYFSIPLELIYFVQKAAFFPYRWVLVLFGAFIVLCGATHFISLWTYSVHSKTVVIVMTVAKMSTAFVSCVTALTLVHIIPDLLSVKKREMFLRKKAEALDWERGLIIKQEETGRHVRMLTHEIRSTLDRNTILKTTLVELGRTLDLEECALWMPSQRGSSLQLSYSLNNLIPFGSTLPINLPIVNEVFNSADAIRIPHTCPLVGIKTHVGTYVPPEVVAVRVPLLHLSDFEVNEWPEIPAKRYAVMVLILPLNGVRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEMGTPMHAVITLSSLLLETELTPDQRMMIETVLKSGNLLAALINDVLDLSRLEDGSLELDNKIFNLHDVFRESMNLINPVASVKNLSTNLTLGIDLPVHAVGDGKWLMQTILNVVGNAVKFTKEGYISVEASVAKPEYYKYLGNPEFVPMSSDNHFYLLVQVKDSGCGISPQDLPLLFTKFLESGNASSRSNSGTGLGLAICRRFLNLMGGHIWIESEGPGKGSKVAFIVRLGLCNNASEPTIQQTVMQGRAHRGSGDLIGHRLFSRDDYIATYIPRNQRSF 663
G +MESCDC ET WP D+LLVKYQYISDFFI+ AYFSIPLELIYFVQK+AFFPYRWVL+ FGAFIVLCGATHFI+LWT+S+HSKTV +VMT+AK++TA VSC TAL LVHIIPDLLSVK RE+FL+ KAE LD E GLI+ QEETGRHVRMLTHEIRSTLDR+TILKTTLVELGRTLDLEECALWMPS+ G +LQLS++L+N+IP GS++PIN+PIVNEVFNSA+AIRIPH+CPL I+ VG +VPPEVVAVRVPLLHLS+F++N+WPE+ AK YAVMVLILP++G+RKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAE+AIRARNDFLAVMNHEM TPMHA+I+LSSLLLETELTPDQR+MIET+LKS NLLA LINDVLDLSRLEDGSL+LD +FNLH+VFR+++NLI P+ASVK LS L L DLPV+A+GD K ++QTI+N+VGNAVKFTK+GYISV AS+AKPE + PEF P+SSD +F+L VQVKDSGCGI PQD+ L FTKF +S S+R+N+G GLGLAIC+RF+NL GGHIWIESEG KG+ V+F+ +LG+CN+ +E T+ + + GR +GS D+IG LF+++ +PR QRS
Sbjct: 16 GLLLKMESCDCIETQWPADELLVKYQYISDFFIAVAYFSIPLELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSMHSKTVAVVMTIAKLATAVVSCATALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLIMSQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLDLEECALWMPSRTGLNLQLSHALSNIIPVGSSVPINIPIVNEVFNSAEAIRIPHSCPLARIRPPVGRFVPPEVVAVRVPLLHLSNFQINDWPELSAKSYAVMVLILPMDGIRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAELAIRARNDFLAVMNHEMRTPMHAIISLSSLLLETELTPDQRVMIETILKSSNLLATLINDVLDLSRLEDGSLKLDAGVFNLHEVFRQAINLIKPIASVKKLSLTLILAPDLPVYAMGDEKRVIQTIINIVGNAVKFTKKGYISVVASIAKPESLRDWRAPEFYPVSSDGYFFLRVQVKDSGCGIPPQDIALCFTKFAQSQGGSNRNNNGAGLGLAICKRFINLKGGHIWIESEGLDKGTTVSFLAKLGICNDPNESTLLEVAVAGRTVQGSADVIGRNLFAKE------LPRYQRSL 649
BLAST of XM_017373722.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438FY09 ((Putative ethylene response sensor 1 {ECO:0000313|EMBL:RVW64824.1}))
HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0
Identity = 471/636 (74.06%), Postives = 535/636 (84.12%), Query Frame = 0
Match: A0A438FY09 ((Putative ethylene response sensor 1 {ECO:0000313|EMBL:RVW64824.1}))
HSP 1 Score: 969.533 bits (2505), Expect = 0.000e+0
Identity = 471/636 (74.06%), Postives = 535/636 (84.12%), Query Frame = 0
Query: 29 MESCDCFETHWPPDDLLVKYQYISDFFISFAYFSIPLELIYFVQKAAFFPYRWVLVLFGAFIVLCGATHFISLWTYSVHSKTVVIVMTVAKMSTAFVSCVTALTLVHIIPDLLSVKKREMFLRKKAEALDWERGLIIKQEETGRHVRMLTHEIRSTLDRNTILKTTLVELGRTLDLEECALWMPSQRGSSLQLSYSLNNLIPFGSTLPINLPIVNEVFNSADAIRIPHTCPLVGIKTHVGTYVPPEVVAVRVPLLHLSDFEVNEWPEIPAKRYAVMVLILPLNGVRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEMGTPMHAVITLSSLLLETELTPDQRMMIETVLKSGNLLAALINDVLDLSRLEDGSLELDNKIFNLHDVFRESMNLINPVASVKNLSTNLTLGIDLPVHAVGDGKWLMQTILNVVGNAVKFTKEGYISVEASVAKPEYYKYLGNPEFVPMSSDNHFYLLVQVKDSGCGISPQDLPLLFTKFLESGNASSRSNSGTGLGLAICRRFLNLMGGHIWIESEGPGKGSKVAFIVRLGLCNNASEPTIQQTVMQGRAHRGSGDLIGHR-LFSRDDYIATYIPRNQRSF 663
MESCDCF+T WP D+LLVKYQYISDFFI+ AYFSIPLELIYFVQK+AFFPYRWVL+ FGAFIVLCGATH I+LW +S+HSKTV +VMT+AK+STA VSC TAL LVHIIPDLLSVK RE L+ KAE LD E GLI+KQEETGRHVRMLTHEIRSTLDR+TILKTTLVELGRTL LEECALWMPS+ G +LQLS++L+N IP G + INLP+VNEVFNSA+AIRIP++CPL I+ VG Y PP+VVAVRVPLLHLS+F++N+WPE+ AK YAVMVLILP + RKWR+HELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLAR+EAE AI ARNDFLAVMNHEM TPMHA+I LSS LLETELTP+QR MIETVLKS NLLA LINDVLDLSRLEDGSLELD FNLH V RE +NLI P++S+K LS L L DLP AVGD K LMQT+LNV GNAVKFTKEGY+SV ASV KPE + PEF P+ SD HFYL VQ+KDSGCGI+PQD+PLLFTKF +S N S+R+NSG GLGLAIC+RF++LMGGHIWIESEGP KG V F+V+LG+ NN +EP+ Q V +GR + GS DL GHR +F + +A+ PR QRS
Sbjct: 1 MESCDCFDTQWPADELLVKYQYISDFFIALAYFSIPLELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHLINLWMFSMHSKTVAVVMTIAKISTAVVSCATALMLVHIIPDLLSVKTREHLLKNKAEELDREMGLIMKQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRTGMTLQLSHTLSNQIPVGKDVQINLPMVNEVFNSAEAIRIPYSCPLARIRPIVGKYGPPDVVAVRVPLLHLSNFQINDWPELSAKSYAVMVLILPSDSGRKWREHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARREAETAIHARNDFLAVMNHEMRTPMHAIIALSSFLLETELTPEQRAMIETVLKSSNLLATLINDVLDLSRLEDGSLELDIGTFNLHAVLREVVNLIKPISSIKKLSMTLILAPDLPECAVGDEKRLMQTLLNVTGNAVKFTKEGYVSVIASVVKPETLRDWRTPEFYPVPSDGHFYLRVQIKDSGCGIAPQDIPLLFTKFAQSRNGSNRTNSGVGLGLAICKRFVSLMGGHIWIESEGPDKGCTVTFVVKLGIGNNPNEPSAQAAVPRGRTNHGSADLAGHRPVFRENARVASPFPRYQRSL 636
BLAST of XM_017373722.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834GB62 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7127513.1}))
HSP 1 Score: 967.992 bits (2501), Expect = 0.000e+0
Identity = 471/640 (73.59%), Postives = 557/640 (87.03%), Query Frame = 0
Match: A0A834GB62 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7127513.1}))
HSP 1 Score: 967.992 bits (2501), Expect = 0.000e+0
Identity = 471/640 (73.59%), Postives = 557/640 (87.03%), Query Frame = 0
Query: 24 GCCWEMESCDCFETHWPPDDLLVKYQYISDFFISFAYFSIPLELIYFVQKAAFFPYRWVLVLFGAFIVLCGATHFISLWTYSVHSKTVVIVMTVAKMSTAFVSCVTALTLVHIIPDLLSVKKREMFLRKKAEALDWERGLIIKQEETGRHVRMLTHEIRSTLDRNTILKTTLVELGRTLDLEECALWMPSQRGSSLQLSYSLNNLIPFGSTLPINLPIVNEVFNSADAIRIPHTCPLVGIKTHVGTYVPPEVVAVRVPLLHLSDFEVNEWPEIPAKRYAVMVLILPLNGVRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAEMAIRARNDFLAVMNHEMGTPMHAVITLSSLLLETELTPDQRMMIETVLKSGNLLAALINDVLDLSRLEDGSLELDNKIFNLHDVFRESMNLINPVASVKNLSTNLTLGIDLPVHAVGDGKWLMQTILNVVGNAVKFTKEGYISVEASVAKPEYYKYLGNPEFVPMSSDNHFYLLVQVKDSGCGISPQDLPLLFTKFLESGNASSRSNSGTGLGLAICRRFLNLMGGHIWIESEGPGKGSKVAFIVRLGLCNNASEPTIQQTVMQGRAHRGSGDLIGHRLFSRDDYIATYIPRNQRSF 663
G EMESCDC ET WP D+LLVKYQYISDFFI+ AYFSIPLELIYFVQK+AFFPYRWVL+ FGAFIVLCGATHFI+LWT+S+HSKTV +VMT+AK++TA VSC TAL LVHIIPDLLSVK RE+FL+ KAE LD E GLI+ QEETGRHVRMLTHEIRSTLDR+TILKTTLVELGRTLDLEECALWMPS+ G +LQLS++L+N+IP GS++PIN+PIVNEVFNSA AIRIPH+CPL I+ VG +VPPEVVAVRVPLLHLS+F++N+WP++ AK YAVMVLILP++G+RKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAE+AIRARNDFLAVMNHEM TPMHA+I+LSSLLLETELTPDQR+MIET+LKS NLLA LINDVLDLSRLEDGSL+LD +FNLH+VFR+++NLI P+ASVK LS L L DLPV+A+GD K ++QTI+N+VGNAVKFTK+GY+SV AS+AKPE + PEF P+SSD +F+L VQVKDSGCGI PQD+ L FTKF +S + S+R+N+G GLGLAIC+RF+NLMGGHIWIESEG KG+ V+F+ +LG+CN+ +E T+ + + GR +GS ++IG LF+++ +PR QRS
Sbjct: 118 GLLLEMESCDCIETQWPADELLVKYQYISDFFIAVAYFSIPLELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSMHSKTVAVVMTIAKLATAVVSCATALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLIMSQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLDLEECALWMPSRTGLNLQLSHALSNIIPVGSSVPINIPIVNEVFNSAQAIRIPHSCPLARIRPPVGRFVPPEVVAVRVPLLHLSNFQINDWPDLSAKSYAVMVLILPMDGIRKWRDHELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARQEAELAIRARNDFLAVMNHEMRTPMHAIISLSSLLLETELTPDQRVMIETILKSSNLLATLINDVLDLSRLEDGSLKLDAGVFNLHEVFRQAINLIKPIASVKKLSLTLILAPDLPVYAMGDEKRVIQTIINIVGNAVKFTKKGYVSVVASIAKPESLRDWRAPEFYPVSSDGYFFLRVQVKDSGCGILPQDIALCFTKFAQSQSGSNRNNNGAGLGLAICKRFINLMGGHIWIESEGLDKGTTVSFLAKLGICNDPNESTMLEVAVAGRTDQGSANVIGRNLFAKE------LPRYQRSL 751
| Match Name | Stats | Description |
|---|---|---|
| A0A2R6P5S0 | E-Value: 0.000e+0, PID: 75.20 | (Ethylene response sensor like {ECO:0000313|EMBL:P... [more] |
| A0A7J0H8E6 | E-Value: 0.000e+0, PID: 76.08 | (Ethylene response sensor 1 {ECO:0000313|EMBL:GFZ1... [more] |
| B3FIA8 | E-Value: 0.000e+0, PID: 75.28 | (Ethylene receptor ERS1b {ECO:0000313|EMBL:ABY2826... [more] |
| A0A7J0G1B7 | E-Value: 0.000e+0, PID: 74.80 | (Ethylene response sensor 1 {ECO:0000313|EMBL:GFZ0... [more] |
| A0A2R6PDU2 | E-Value: 0.000e+0, PID: 74.65 | (Ethylene response sensor like {ECO:0000313|EMBL:P... [more] |
| A0A5B6YNZ4 | E-Value: 0.000e+0, PID: 77.76 | (Putative ethylene receptor ERS1b {ECO:0000313|EMB... [more] |
| D7U2C9 | E-Value: 0.000e+0, PID: 74.21 | Histidine kinase domain-containing protein {ECO:00... [more] |
| A0A6A4LY95 | E-Value: 0.000e+0, PID: 73.75 | Histidine kinase domain-containing protein {ECO:00... [more] |
| A0A438FY09 | E-Value: 0.000e+0, PID: 74.06 | (Putative ethylene response sensor 1 {ECO:0000313|... [more] |
| A0A834GB62 | E-Value: 0.000e+0, PID: 73.59 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7127... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |