Resource Type:
Polypeptide
Name:
XM_017375157.1
Identifier:
XM_017375157.1-protein
Sequence:
MDDNNHNDKSTISEISSPYDKRRSPGIKTQKPLKSPSQAKNKNTTTITTT
TTMNVVEESESVPQSESESLSKRQRVEQGKEKLQIFKQGEDDDKAAFAVV
TEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSKPKKGETLDVDSKKG
ARRPDLKALVKMRETNAILCPNKIGSIPGIEVGKQFFSRAEMVAVGFNSH
WLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGG
NKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYT
YDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKS
VSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVE
LPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYEC
GPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEY
IGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPFVENDD
DKDSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLF
AADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF
Sequence Length:
646
Sequence Checksum:
16311517fae75605ab08008c80279247
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017375157.1, derives from mRNA, XM_017375157.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7A8P9 ((Putative histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 {ECO:0000313|EMBL:MPA51353.1}) (2.1.1.43 {ECO:0000313|EMBL:MPA51353.1}))
HSP 1 Score: 877.856 bits (2267), Expect = 0.000e+0
Identity = 410/559 (73.35%), Postives = 476/559 (85.15%), Query Frame = 0
Match: A0A5B7A8P9 ((Putative histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 {ECO:0000313|EMBL:MPA51353.1}) (2.1.1.43 {ECO:0000313|EMBL:MPA51353.1}))
HSP 1 Score: 877.856 bits (2267), Expect = 0.000e+0
Identity = 410/559 (73.35%), Postives = 476/559 (85.15%), Query Frame = 0
Query: 93 DKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISH-AGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIP-FVENDDDK--DSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
+K+A+A VTE LRTF K+YLHFVQEEEKRC + E + K SK KKG+ + D+K+G++RPDLKA+ KM ETNAIL PNK GSIPGI+VG QFFSRAEMVAVGF+SHWLNGID I AG Y LP+AV IV+SGQYEDDLDNC+D+VYTGQGGN L GN+RQ RDQV+E+GNL LKN M+QCVPVRVVRGH+ SSYVGKVYTYDGLYKVV YW+EKGVSGF V+KFRLKRLEGQPLLTT+QVQ++ G++P S+S++ GLVCEDI+ GQE +PIPATN VDDPP+APTGFTYC IQV+ V+LP A GC+C C K+C+C +LNGS+ PYV RDGGRLIEPKAVV+ECGPNCGCGPGC+NR SQRGLKYRLEV+RTPKKGWAVRSWD+IPSGAPVCEY G LMKTD++D + ENN+IFDIDCLQTMKGLDGRERRL +SIP +++N DD D+ PEFC+DAG TGN+ARFINHSCQPNLFVQCVLS+HHD+K ARVVLFAADNIPP+KEL+YDY YALDSV+ PDGKI+Q+ CYCGAA CRKRLF
Sbjct: 163 EKSAYARVTETLRTFNKHYLHFVQEEEKRCRRVEVDRKTTKGSKFKKGDAPEDDTKRGSKRPDLKAITKMMETNAILYPNKRYGSIPGIDVGHQFFSRAEMVAVGFHSHWLNGIDFIGQSAGKGEYSGYTLPLAVAIVLSGQYEDDLDNCEDVVYTGQGGNNLLGNKRQIRDQVMERGNLALKNCMEQCVPVRVVRGHQSASSYVGKVYTYDGLYKVVKYWAEKGVSGFTVYKFRLKRLEGQPLLTTNQVQYSRGRIPHSISEMHGLVCEDITGGQEDIPIPATNSVDDPPIAPTGFTYCKFIQVARSVKLPRNATGCDCKDTCRDPKSCACVRLNGSDFPYVHRDGGRLIEPKAVVFECGPNCGCGPGCINRTSQRGLKYRLEVFRTPKKGWAVRSWDHIPSGAPVCEYTGILMKTDEIDTVSENNFIFDIDCLQTMKGLDGRERRLRDVSIPTYLDNGDDHKSDNVPEFCIDAGSTGNIARFINHSCQPNLFVQCVLSSHHDIKLARVVLFAADNIPPLKELTYDYGYALDSVMGPDGKIRQMPCYCGAADCRKRLF 721
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RZC3 ((Histone-lysine N-methyltransferase {ECO:0000313|EMBL:PSS35329.1}))
HSP 1 Score: 831.632 bits (2147), Expect = 0.000e+0
Identity = 393/573 (68.59%), Postives = 461/573 (80.45%), Query Frame = 0
Match: A0A2R6RZC3 ((Histone-lysine N-methyltransferase {ECO:0000313|EMBL:PSS35329.1}))
HSP 1 Score: 831.632 bits (2147), Expect = 0.000e+0
Identity = 393/573 (68.59%), Postives = 461/573 (80.45%), Query Frame = 0
Query: 84 QIFKQGEDDDKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSK------PKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPFV--ENDDDK-DSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
++ + G +K+A A VTE LRTF K YLHFVQEEEKRC +P K K+ K K+G+ D+K+G++RPDLKA+ KM+ETNAIL P+K IG IPGI+VG QF+SRAEMVA+GF+SHWLNGID I + Y LPI IVMSG YEDDLDNCDDIVYTGQGGN L GN+RQ +DQV+ GNLGLKN +DQ V VRVVRGH+ SYV +VYTYDGLYKVV YW+EKGVSGF V+KF LKRLEGQPLLTT+QVQF+ G++P S+S++RGLVCEDIS+GQE +PIPATNLVDD P+APTGFTYC S+QV + V+LP A GC C G C K C+C +LNGS+ PYV RDGGRLIEPKAVV+ECGPNCGCGP CVNR SQ+G++YRLEV+ TPKKGW VRSWD+IPSGAPVCEYIG LMKTD+VD ENNY+FDIDCLQTMKGLDGRE RL +SIP +NDD K D PEFC+DAG +GN++RFINHSCQPNLFVQCVLS+HHD+KQAR+VLFAADNIPP+KEL+YDY Y +D V+ PDGKI+Q+ CYCGA CRKRL
Sbjct: 157 EVAESGIGIEKSAHAKVTETLRTFNKLYLHFVQEEEKRCGRPGGDKKKTKSQKISKGSNSKQGKAPADDTKRGSKRPDLKAISKMKETNAILYPDKRIGPIPGIDVGHQFYSRAEMVAIGFHSHWLNGIDYIGKTAGKQYSNYKLPITTAIVMSGHYEDDLDNCDDIVYTGQGGNDLLGNKRQKKDQVMTLGNLGLKNCIDQDVLVRVVRGHQSAHSYVKRVYTYDGLYKVVKYWAEKGVSGFTVYKFSLKRLEGQPLLTTNQVQFSRGRIPNSISEIRGLVCEDISWGQEGIPIPATNLVDDQPIAPTGFTYCKSMQVRKSVKLPSNAPGCGCEGTCVDPKRCACVRLNGSDFPYVHRDGGRLIEPKAVVFECGPNCGCGPECVNRTSQKGMRYRLEVFCTPKKGWGVRSWDFIPSGAPVCEYIGVLMKTDEVDPTSENNYVFDIDCLQTMKGLDGRESRLRDVSIPLPLDKNDDQKSDCVPEFCIDAGSSGNISRFINHSCQPNLFVQCVLSSHHDIKQARIVLFAADNIPPLKELTYDYGYVVDGVLGPDGKIRQMACYCGAEDCRKRLL 729
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6R0T9 ((Histone-lysine N-methyltransferase {ECO:0000313|EMBL:PSS18252.1}))
HSP 1 Score: 828.165 bits (2138), Expect = 0.000e+0
Identity = 391/573 (68.24%), Postives = 462/573 (80.63%), Query Frame = 0
Match: A0A2R6R0T9 ((Histone-lysine N-methyltransferase {ECO:0000313|EMBL:PSS18252.1}))
HSP 1 Score: 828.165 bits (2138), Expect = 0.000e+0
Identity = 391/573 (68.24%), Postives = 462/573 (80.63%), Query Frame = 0
Query: 84 QIFKQGEDDDKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKP------EAVKNNKKTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPF-VENDDDK--DSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
++ + G +K+A A VTE LRTF K YLHFVQEEEKRC +P + + K S K+G+ + D+K+G++RPDLKA+ KM+E NAIL P+K IG IPGI+VG QF+SRAEMVA+GF+SHWLNGID I + Y LPI IVMSG YEDDLDNCDDIVYTGQGGN L GN+RQ +DQV+ GNLGLKN +DQ V VRVVRGH+ SYV +VYTYDGLYKVV YW+EKGVSGF V+KF LKRLEGQPLLTT+QVQF+ G++P S+S++RGLVCEDIS GQE +PIPATNLVDDPP+APTG TYC S+QV + V+LP A GC C G C K+C+CA+LNG + PYV RDGGRLIEPKAVV+ECGPNCGCGP CVNR SQ+G++YRLEV+RTPKKGW VRSWD+IPSGAPVCEYIG LMKTD+VD ENNY+FDIDCLQTMKGLDGRERRL +SIP ++ DD+ D PEFC+DAG GN++RFINHSCQPNLFVQCVLS+HHD+KQAR+VLFAADNIPP+KEL+YDY Y +D V+ PDGKI+Q+ CYCGA CRKRL
Sbjct: 158 EVAESGIGIEKSAHAKVTETLRTFNKLYLHFVQEEEKRCGRPGGDKKKKKSQKITKGSNSKQGKAPEDDTKRGSKRPDLKAISKMKEINAILYPDKRIGPIPGIDVGHQFYSRAEMVAIGFHSHWLNGIDYIGKTAGKQYSNYKLPITTAIVMSGHYEDDLDNCDDIVYTGQGGNDLLGNKRQKKDQVMTLGNLGLKNCIDQDVAVRVVRGHQSTHSYVKRVYTYDGLYKVVKYWAEKGVSGFTVYKFSLKRLEGQPLLTTNQVQFSRGRIPNSISEIRGLVCEDISLGQEGIPIPATNLVDDPPIAPTGLTYCKSMQVRKSVKLPSNAPGCGCKGTCVDPKSCACARLNGLDFPYVHRDGGRLIEPKAVVFECGPNCGCGPECVNRTSQKGMRYRLEVFRTPKKGWGVRSWDFIPSGAPVCEYIGVLMKTDEVDPGSENNYVFDIDCLQTMKGLDGRERRLRDVSIPLPLDKSDDQKSDCVPEFCIDAGSLGNISRFINHSCQPNLFVQCVLSSHHDIKQARIVLFAADNIPPLKELTYDYGYVVDGVLGPDGKIRQMACYCGAEDCRKRLL 730
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6S7MMJ7 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4089165.1}))
HSP 1 Score: 824.313 bits (2128), Expect = 0.000e+0
Identity = 403/626 (64.38%), Postives = 487/626 (77.80%), Query Frame = 0
Match: A0A6S7MMJ7 ((Uncharacterized protein {ECO:0000313|EMBL:CAB4089165.1}))
HSP 1 Score: 824.313 bits (2128), Expect = 0.000e+0
Identity = 403/626 (64.38%), Postives = 487/626 (77.80%), Query Frame = 0
Query: 28 KTQKPLKSPSQAKNKNTTTITTTTTMNVVEESE-SVPQSESESLSKRQRVEQGKEKLQIFK-----QGEDDDKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPFVENDDDKDSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
KT+KP K NK T V +E + +V S S+ ++ ++ G+EK + + +G+ +K+ +A+VT+ +R F K+YLHFVQEEE RC K EA + K+T K K + V+ K A+RPDLKAL KM ++N IL P K IGSIPG++VG QFFSR EMV+VGF++HWL GID I + + Y LPI V IV+SGQYEDDLDN +D+VYTGQGGN L GN+RQ DQV+ +GNLGLKN MDQ VPVRV+RGH+ SSYVGKVYTYDGLYKVV YW+EKGVSGF V+KFRLKR+EGQP L T+QV F G++P S+S+LRG+VCEDIS G E +PIPATNLVDDPPV PTG+ Y SI+VS++V +P A GCNC G+C + C+CA+LNGS+ PYV RDGGRLIEPKAVV+ECGPNCGCGPGCVNR SQ+GL+YRLEV+RTPKKGWAVRSWDYIPSGA VCEYIG L KTDDVD+ PENNYIFDIDCLQTMKG+ RERR+G +++P + + DD DS PEFC+DAG TGNVARFINHSCQPNLFVQCVLS HHD+ QARV+LFAADNIPP+KEL+YDY Y LDSV+ PDGK+K+L CYCGA CR+RLF
Sbjct: 67 KTEKPTKKQRLNYNKKKVISGNVQTQVVHDEGKRTVVTSNSDGDTEHKKKPNGEEKREEIENGSACKGQVGEKSVYAMVTDTIRAFNKHYLHFVQEEETRCKKDEA--DRKRTKKLKSKDA--VEEKGKAKRPDLKALTKMMDSNTILRPPKRIGSIPGVDVGHQFFSRCEMVSVGFHNHWLCGIDYIGISSKKEYPQYALPITVAIVLSGQYEDDLDNSEDVVYTGQGGNNLLGNKRQISDQVMARGNLGLKNCMDQDVPVRVIRGHQSSSSYVGKVYTYDGLYKVVKYWAEKGVSGFTVYKFRLKRMEGQPSLVTEQVYFHKGRIPNSMSELRGMVCEDISGGLENIPIPATNLVDDPPVPPTGYKYIKSIKVSKNVVVPGSASGCNCKGSCVDPRNCACARLNGSDFPYVHRDGGRLIEPKAVVFECGPNCGCGPGCVNRTSQKGLRYRLEVFRTPKKGWAVRSWDYIPSGALVCEYIGILKKTDDVDSNPENNYIFDIDCLQTMKGIGRRERRVGEVAMPSLLDKDD-DSGPEFCIDAGSTGNVARFINHSCQPNLFVQCVLSVHHDITQARVILFAADNIPPLKELTYDYGYELDSVMGPDGKVKKLACYCGAPDCRQRLF 687
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834Z1Z1 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8400074.1}))
HSP 1 Score: 822.002 bits (2122), Expect = 0.000e+0
Identity = 392/571 (68.65%), Postives = 462/571 (80.91%), Query Frame = 0
Match: A0A834Z1Z1 ((Uncharacterized protein {ECO:0000313|EMBL:KAF8400074.1}))
HSP 1 Score: 822.002 bits (2122), Expect = 0.000e+0
Identity = 392/571 (68.65%), Postives = 462/571 (80.91%), Query Frame = 0
Query: 94 KAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNK--KTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSR--AYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPFVE----NDDDKDSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPP----------MKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRL 645
K+A+A V E +R F +YLHFVQEEEKRC K E VK+ K K SK KKG+ + D K+ ++RPDLKA+ KM ET AIL P K G +PGI+VG QFFSRAEMVAVGF+SHWLNGID + + +L Y P+AV IV+SGQYEDDLDN +D+VYTGQGGN L GN+RQ +DQV+++GNL LKNSM+QCVPVRV+RGH SSY GKVYTYDGLYKVV+YW+EKGVSGF VFK+RL+R+EGQP+LTT+QV F+ G P+S S++RGLVCEDIS QE + IPATNLVDDPPVAPTG++Y SIQVS+ V+LP+ A GC+C G C KTC+CA+LNGS+ PYV RDGGRLIE KAVV+ECGP CGCGPGCVNR SQRG KYRLEV+RTPKKGWAVRSWDYIPSGAP+CEY G LM+TD++D + ENN+IF+IDCLQTMKGLDGRERRLG + IP +D+ +S PEFC+DAG GNVARFINHSC+PNLFVQCVLS+HHD+K ARVVLFAADNIPP M EL+YDY YALDSV+ PDGKIK++LCYCGAA CRKRL
Sbjct: 135 KSAYARVKETIRVFNTHYLHFVQEEEKRCKKVE-VKDLKIAKGSKSKKGDACEEDIKRSSKRPDLKAITKMMETKAILYPGKRFGQLPGIDVGHQFFSRAEMVAVGFHSHWLNGIDYMGQSYKKLMEYSGYTFPLAVAIVLSGQYEDDLDNSEDVVYTGQGGNNLLGNKRQVQDQVMDRGNLALKNSMEQCVPVRVIRGHGSASSYCGKVYTYDGLYKVVNYWAEKGVSGFTVFKYRLRRIEGQPILTTNQVHFSRGHAPRSFSEIRGLVCEDISGDQEDIHIPATNLVDDPPVAPTGYSYSKSIQVSKSVKLPMNATGCDCKGTCVDPKTCACARLNGSDFPYVRRDGGRLIEAKAVVFECGPKCGCGPGCVNRTSQRGSKYRLEVFRTPKKGWAVRSWDYIPSGAPICEYTGVLMRTDEIDNVSENNFIFEIDCLQTMKGLDGRERRLGDVCIPASHPDKTDDNRSESVPEFCIDAGSIGNVARFINHSCEPNLFVQCVLSSHHDVKLARVVLFAADNIPPLQKRGFDEGEMLELTYDYGYALDSVIGPDGKIKEMLCYCGAADCRKRL 704
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A067L3Q8 ((Uncharacterized protein {ECO:0000313|EMBL:KDP41858.1}))
HSP 1 Score: 821.617 bits (2121), Expect = 0.000e+0
Identity = 385/561 (68.63%), Postives = 461/561 (82.17%), Query Frame = 0
Match: A0A067L3Q8 ((Uncharacterized protein {ECO:0000313|EMBL:KDP41858.1}))
HSP 1 Score: 821.617 bits (2121), Expect = 0.000e+0
Identity = 385/561 (68.63%), Postives = 461/561 (82.17%), Query Frame = 0
Query: 93 DKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEA-VKNNKKTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPFVEN-----DDDKDSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
+K+A A V E LR F K+YLHFVQEEE RC K E K K+ K KKG VD+KK A+RPDLKA+ KM ETNAI+ P K IG + GI VG QF+SRAEMVAVGF+SHWLNGID + + S+ Y P+A+ IV+SG YEDDLDN +D++YTGQGG+ L GN+RQ RDQV+E+GNL LKN ++Q VPVRV+RGHE SSY GKVYTYDGLYKVV YW+EKG+SGF VFK+RL+R EGQP+LTT+QVQF G+VP+S+S++RGLVCEDIS G+E VPIPATNLVDDPPV PTGFTY S+QVS+ ++LP A+GC+C G C +TC+CA+LNG++ PYV RDGGRLIE KA+VYECGPNCGCGP CVNR SQRGLKYR EV+R+PKKGWAVRSWD+IPSGAP+CEY+G LM+T+D+D++ +NNYIF+IDCLQTM GL GRERRLG +S+P + N D +S PEFC+DAG TGN+ARFINHSC+PNLFVQCVLS+HHDLK ARV+LFAADNIPP++EL+YDY YALDSV PDGKIKQ+ CYCGAA CRKRLF
Sbjct: 129 EKSAHARVKETLRLFNKHYLHFVQEEETRCQKEEVDKKKASKSKKSKKGNATKVDAKKKAKRPDLKAISKMLETNAIMYPEKKIGDLAGINVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYSKEYADYTFPLAIAIVLSGMYEDDLDNAEDVIYTGQGGHDLTGNKRQIRDQVMERGNLALKNCVEQGVPVRVIRGHESASSYSGKVYTYDGLYKVVQYWAEKGISGFTVFKYRLRRFEGQPILTTNQVQFIYGRVPQSISEIRGLVCEDISGGREDVPIPATNLVDDPPVPPTGFTYRKSLQVSKSIKLPTSAVGCDCKGGCVDPRTCACAQLNGTDFPYVHRDGGRLIEAKAIVYECGPNCGCGPHCVNRTSQRGLKYRFEVFRSPKKGWAVRSWDFIPSGAPICEYVGVLMRTEDLDSVLDNNYIFEIDCLQTMSGLGGRERRLGDVSVPTINNSNRPEDQKSESVPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHHDLKLARVMLFAADNIPPLQELTYDYGYALDSVTGPDGKIKQMACYCGAADCRKRLF 689
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A124S3J1 ((Histone H3-K9 methyltransferase, plant {ECO:0000313|EMBL:KVH65602.1}))
HSP 1 Score: 819.691 bits (2116), Expect = 0.000e+0
Identity = 407/664 (61.30%), Postives = 493/664 (74.25%), Query Frame = 0
Match: A0A124S3J1 ((Histone H3-K9 methyltransferase, plant {ECO:0000313|EMBL:KVH65602.1}))
HSP 1 Score: 819.691 bits (2116), Expect = 0.000e+0
Identity = 407/664 (61.30%), Postives = 493/664 (74.25%), Query Frame = 0
Query: 8 DKSTISEISSPYDKRRSPGIKTQKPLKSPSQAKNKNTTTITTTTTMNVVEESESVPQSESESLSKRQRVEQGKEKLQIFKQGEDDDKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSKPKKG-ETLDVDSKKG-ARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQV---------------------QFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIP-FVENDDDKDSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
++ ++++ P K++ QK + Q + I T T N +E + + E ++ + +E G +G+ +++A+A+VT+ +R F K+YL+FVQ EE RC K E + K K KK + D +K A+RPDLKAL KM +N ILCP K IGSIPGI+VG QFFSR EMV VGF++HWLNGID I + + Y LPI V IV+SGQYEDDLDNC+D+VYTGQGGN L GN+RQ DQV+++GNLGLKN +DQ VPVRV+RGH+ SSYVGKVYTYDGLYKVV +W+EKGVSGF VFKF+LKR+EGQP L T+QV FA G++P SVS++RGLVCEDIS G E +PIPATNLVDDP VAPTG+TYC SIQVS+ V LP A GCNC G+C + C+CA+LNGS+ PYV RDGGRLIEPKAVV+ECGPNCGCG CVNR SQRGL+YRLEV+RTPKKGWAVRSWDYIPSGAPVCEYIG L KTDDVD+ PENNYIFDIDCLQTMKG+ GRERR+G +++P ++ DD+KDS PEFC+DAG TGNVARFINHSCQPNLFVQCVLS HHD+ QARV+LFAADNIPP+KEL+YDY Y L+SV+ PDGK+KQL C+CGA CRKRLF
Sbjct: 58 EEDSLTKADKPVRKKQRLNHHKQKGIAGNVQTQLVQDEGILTGVTSNSDGGTEHTEKLKGEDIT--EEIETGSTS-----KGQVGERSAYAMVTDTIRAFNKHYLYFVQVEESRCKKDEDDRKKPKKPKSKKFVQNQDATEEKAKAKRPDLKALSKMMTSNTILCPQKRIGSIPGIDVGHQFFSRCEMVTVGFHNHWLNGIDYIGQSSQKEYPQYKLPITVAIVLSGQYEDDLDNCEDVVYTGQGGNNLLGNKRQISDQVMKRGNLGLKNCLDQDVPVRVIRGHQSSSSYVGKVYTYDGLYKVVKHWAEKGVSGFTVFKFQLKRIEGQPSLVTEQVPMLAHGSFKKSIPEHNYIIDVHFAHGRIPSSVSEIRGLVCEDISGGLENIPIPATNLVDDPAVAPTGYTYCKSIQVSKSVVLPTSASGCNCQGSCTDPRNCACARLNGSDFPYVHRDGGRLIEPKAVVFECGPNCGCGLTCVNRTSQRGLRYRLEVFRTPKKGWAVRSWDYIPSGAPVCEYIGILKKTDDVDSNPENNYIFDIDCLQTMKGIGGRERRVGEVAMPSLLDKDDEKDSGPEFCIDAGGTGNVARFINHSCQPNLFVQCVLSVHHDITQARVILFAADNIPPLKELTYDYGYELNSVLGPDGKVKQLACFCGAPDCRKRLF 714
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6VHV3 ((histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X1 {ECO:0000313|RefSeq:XP_027102120.1}))
HSP 1 Score: 815.453 bits (2105), Expect = 0.000e+0
Identity = 390/558 (69.89%), Postives = 458/558 (82.08%), Query Frame = 0
Match: A0A6P6VHV3 ((histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X1 {ECO:0000313|RefSeq:XP_027102120.1}))
HSP 1 Score: 815.453 bits (2105), Expect = 0.000e+0
Identity = 390/558 (69.89%), Postives = 458/558 (82.08%), Query Frame = 0
Query: 93 DKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPF-VENDDDK--DSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
+++A A VTE LR F K YLHFVQEEEKRC K + + NK S PK+ D D+K+G++RPDLKA+ KM+ET ++L P K IGSIPGI+VG QFFSRAEMV +GF+SHWLNGID I A Y LP+AV IV+SGQYEDDLDN ++IVYTGQGGN L G++RQ +DQV+ GNLGLKN ++ VPVRVVRGH+C +SYVGKVYTYDGLYKVV+YW+EKGVSGF V+KFRLKRLEGQP LTT QV + +VP S++++RGLVC+DI+ GQE +PIPATNLVDDPPV PTGFTY ++ +++V+LPL A GC+C G C C+CAKLNGS+ PYV RDGGRLIEPKAVV+EC PNCGCGPGCVNRISQRGLKYRLEV+RTP +GW VR WDYIPSGAP+CEYIG+L KTDD+D+ N+YIFDIDCLQTMKGLDGRERRL +S+P +ENDDDK +S PEFC+DAG GNVARFINHSCQPNLFVQC+LS HHD+K ARVVL AADNIPP+KEL+YDY YALDSV PDG IKQ+ CYCGAA CRKRLF
Sbjct: 141 ERSASASVTETLRQFNKCYLHFVQEEEKRCGKLDDRQKNK-ASCPKENIAED-DTKRGSKRPDLKAITKMKETCSVLNPTKMIGSIPGIDVGHQFFSRAEMVVLGFHSHWLNGIDYIGQARRSDLGDYKLPLAVSIVLSGQYEDDLDNFEEIVYTGQGGNNLLGDKRQIKDQVMRLGNLGLKNCIEHSVPVRVVRGHKCTNSYVGKVYTYDGLYKVVNYWAEKGVSGFTVYKFRLKRLEGQPPLTTSQVHYTRSRVPDSIAEIRGLVCKDITGGQEDIPIPATNLVDDPPVPPTGFTYHKDMKFAKNVKLPLNASGCSCRGTCTDPGVCACAKLNGSDFPYVFRDGGRLIEPKAVVFECNPNCGCGPGCVNRISQRGLKYRLEVFRTPNRGWGVRCWDYIPSGAPICEYIGRLTKTDDIDSAAGNSYIFDIDCLQTMKGLDGRERRLRDVSLPVNLENDDDKMSESVPEFCIDAGSAGNVARFINHSCQPNLFVQCILSTHHDIKLARVVLIAADNIPPLKELTYDYGYALDSVAGPDGIIKQMPCYCGAADCRKRLF 696
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1EK99 ((histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like isoform X2 {ECO:0000313|RefSeq:XP_022928431.1}))
HSP 1 Score: 813.142 bits (2099), Expect = 0.000e+0
Identity = 399/630 (63.33%), Postives = 476/630 (75.56%), Query Frame = 0
Match: A0A6J1EK99 ((histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like isoform X2 {ECO:0000313|RefSeq:XP_022928431.1}))
HSP 1 Score: 813.142 bits (2099), Expect = 0.000e+0
Identity = 399/630 (63.33%), Postives = 476/630 (75.56%), Query Frame = 0
Query: 35 SPSQAKNKNTTTITTTTTMN----VVEESESVPQSESESLSKRQRVEQGKEKLQIFKQGEDDD--------KAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPF---VENDDDK--DSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
SPS+ K KN + T + V +++ +VP S + SK + E + K D+ K+ A V E LR F KYYLHFVQEEE+RC K E + K SK K D SK+ +RPDLKA+ KM E N IL P K IG IPGI +G +F+SRAEMVAVGF+SHWLNGID + + S++ Y+ P+AV IV+SG YEDDLDN +D+VYTGQGG L GN+RQ RDQV+E+GNL LKN ++Q VPVRV+RGHE SSY GK+YTYDGLYKV+ YW+EKG+SGF VFKFRL+R+EGQ LLTT+QVQF G+VPKSVS++RGLVCEDI+ QE +PIPATNLVDDPPVAPTGFTYC SI+V V+LP A GC+CSG+C S+TCSCAKLNG + PYV RDGGRLIE K VVYECGPNCGCGPGCVNR SQRG+KYRLEV+RTPKKGWAVRSWD+IPSGAPVCEY G L +TDD+D + ENNYIFDIDCLQT++G GR RR S+P V+ DD+ +S PEFC+DA TGN+ARFINHSC+PNLFVQCVLS+HHD+K ARVVLFAA+NIPP++EL+YDY YALDSV DGKIKQ+ C+CGA CRKRLF
Sbjct: 87 SPSKRKKKNGPVRSKRNTKSKDKAVEDKAVAVPVSNDVTKSKDGGASEPMEVCALEKSTTADEGGPANVVEKSDHAKVKETLRLFNKYYLHFVQEEEQRCKKAEVAQKVSKGSKSKAAPEEDTKSKR--KRPDLKAITKMMEANEILNPEKRIGDIPGISIGHRFYSRAEMVAVGFHSHWLNGIDYMGMSYSKMYSNYSFPVAVSIVLSGMYEDDLDNAEDVVYTGQGGQDLTGNKRQIRDQVMERGNLALKNCIEQAVPVRVLRGHESASSYCGKLYTYDGLYKVIQYWAEKGISGFTVFKFRLRRIEGQSLLTTNQVQFVYGRVPKSVSEIRGLVCEDITGSQEDIPIPATNLVDDPPVAPTGFTYCKSIKVGHGVKLPSNANGCDCSGSCISSRTCSCAKLNGLDFPYVHRDGGRLIEAKDVVYECGPNCGCGPGCVNRTSQRGIKYRLEVFRTPKKGWAVRSWDFIPSGAPVCEYTGILSRTDDLDHVSENNYIFDIDCLQTIRGFGGRMRRSRDASLPANNSVDGIDDQRSESVPEFCVDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGSDGKIKQMPCFCGATECRKRLF 714
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1D471 ((histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X2 {ECO:0000313|RefSeq:XP_022148117.1}))
HSP 1 Score: 810.831 bits (2093), Expect = 0.000e+0
Identity = 396/628 (63.06%), Postives = 477/628 (75.96%), Query Frame = 0
Match: A0A6J1D471 ((histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X2 {ECO:0000313|RefSeq:XP_022148117.1}))
HSP 1 Score: 810.831 bits (2093), Expect = 0.000e+0
Identity = 396/628 (63.06%), Postives = 477/628 (75.96%), Query Frame = 0
Query: 28 KTQKPLKSPSQAKNKNTTTITTTTTMNVVEESESVPQSESESLSKRQRVEQGKEKLQIFKQGEDD---DKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPFVE-----NDDDKDSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
KT ++S A + T NVV S+ V + + ++ S+ R EK + G +K+ V E LR F K+YLHFVQEEEKRC K E + K SK K D +K ++RPDLKA+ KM E N IL K IG+IPG+ +G +F+SRAEMVAVGF+SHWLNGID + + S++ Y+ P+AV IV+SG YEDDLDN +D+VYTGQGG L GN+RQ RDQ +E+GNL LKN ++Q VPVRVVRGHEC SSY GK+YTYDGLYKV+ YW+EKG+SGF VFKFRL+R+EGQ LLTT+QVQF G+VPKSVS++RGLVCEDI+ GQE VPIPATNLVDDPPVAPTGFTYC SI+V+ V+LP A GC+CSG+C S+TCSCAKLNG + PYV RDGGRLIE K VVYECGPNCGCGPGCVNR SQRG+KYRLEV+RTPKKGWAVRSWD+IPSGAPVCEYIG L +T+D+D + ENNYIFDIDCLQT++G+ GRERR S+P +D +S PEFC+DA TGN+ARFINHSC+PNLFVQCVLS+HHD+K ARVVLFAA+NIPP++EL+YDY YALDSV PDGK+KQ+ C+CGA CRKRLF
Sbjct: 91 KTNDQVRSRRNAVSDGGKTAEDNDNDNVVSVSKDVTKHKDDNASE-PREMCSPEKSKALVDGAPASLVEKSDHVKVKETLRLFNKHYLHFVQEEEKRCKKAEVAEKASKGSKSKVAPVEDAKNK--SKRPDLKAISKMLEANEILNHEKRIGNIPGVNIGHRFYSRAEMVAVGFHSHWLNGIDYMGMSYSKMYSNYSFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGQNLTGNKRQIRDQKMERGNLALKNCIEQAVPVRVVRGHECASSYCGKLYTYDGLYKVIQYWAEKGISGFTVFKFRLRRIEGQSLLTTNQVQFIYGRVPKSVSEIRGLVCEDITGGQENVPIPATNLVDDPPVAPTGFTYCKSIKVAHGVKLPSNANGCDCSGSCIASRTCSCAKLNGLDFPYVHRDGGRLIEAKDVVYECGPNCGCGPGCVNRTSQRGIKYRLEVFRTPKKGWAVRSWDFIPSGAPVCEYIGILTRTEDLDHVSENNYIFDIDCLQTIRGIGGRERRSKDASLPANNSLDGIDDQRSESVPEFCIDACFTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKLKQMPCFCGATECRKRLF 715
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7A8P9 | E-Value: 0.000e+0, PID: 73.35 | (Putative histone-lysine N-methyltransferase, H3 l... [more] |
| A0A2R6RZC3 | E-Value: 0.000e+0, PID: 68.59 | (Histone-lysine N-methyltransferase {ECO:0000313|E... [more] |
| A0A2R6R0T9 | E-Value: 0.000e+0, PID: 68.24 | (Histone-lysine N-methyltransferase {ECO:0000313|E... [more] |
| A0A6S7MMJ7 | E-Value: 0.000e+0, PID: 64.38 | (Uncharacterized protein {ECO:0000313|EMBL:CAB4089... [more] |
| A0A834Z1Z1 | E-Value: 0.000e+0, PID: 68.65 | (Uncharacterized protein {ECO:0000313|EMBL:KAF8400... [more] |
| A0A067L3Q8 | E-Value: 0.000e+0, PID: 68.63 | (Uncharacterized protein {ECO:0000313|EMBL:KDP4185... [more] |
| A0A124S3J1 | E-Value: 0.000e+0, PID: 61.30 | (Histone H3-K9 methyltransferase, plant {ECO:00003... [more] |
| A0A6P6VHV3 | E-Value: 0.000e+0, PID: 69.89 | (histone-lysine N-methyltransferase, H3 lysine-9 s... [more] |
| A0A6J1EK99 | E-Value: 0.000e+0, PID: 63.33 | (histone-lysine N-methyltransferase, H3 lysine-9 s... [more] |
| A0A6J1D471 | E-Value: 0.000e+0, PID: 63.06 | (histone-lysine N-methyltransferase, H3 lysine-9 s... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |