BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A5B7A8P9 ((Putative histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 {ECO:0000313|EMBL:MPA51353.1}) (2.1.1.43 {ECO:0000313|EMBL:MPA51353.1}))
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A2R6RZC3 ((Histone-lysine N-methyltransferase {ECO:0000313|EMBL:PSS35329.1}))
Query: 84 QIFKQGEDDDKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSK------PKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPFV--ENDDDK-DSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
++ + G +K+A A VTE LRTF K YLHFVQEEEKRC +P K K+ K K+G+ D+K+G++RPDLKA+ KM+ETNAIL P+K IG IPGI+VG QF+SRAEMVA+GF+SHWLNGID I + Y LPI IVMSG YEDDLDNCDDIVYTGQGGN L GN+RQ +DQV+ GNLGLKN +DQ V VRVVRGH+ SYV +VYTYDGLYKVV YW+EKGVSGF V+KF LKRLEGQPLLTT+QVQF+ G++P S+S++RGLVCEDIS+GQE +PIPATNLVDD P+APTGFTYC S+QV + V+LP A GC C G C K C+C +LNGS+ PYV RDGGRLIEPKAVV+ECGPNCGCGP CVNR SQ+G++YRLEV+ TPKKGW VRSWD+IPSGAPVCEYIG LMKTD+VD ENNY+FDIDCLQTMKGLDGRE RL +SIP +NDD K D PEFC+DAG +GN++RFINHSCQPNLFVQCVLS+HHD+KQAR+VLFAADNIPP+KEL+YDY Y +D V+ PDGKI+Q+ CYCGA CRKRL
Sbjct: 157 EVAESGIGIEKSAHAKVTETLRTFNKLYLHFVQEEEKRCGRPGGDKKKTKSQKISKGSNSKQGKAPADDTKRGSKRPDLKAISKMKETNAILYPDKRIGPIPGIDVGHQFYSRAEMVAIGFHSHWLNGIDYIGKTAGKQYSNYKLPITTAIVMSGHYEDDLDNCDDIVYTGQGGNDLLGNKRQKKDQVMTLGNLGLKNCIDQDVLVRVVRGHQSAHSYVKRVYTYDGLYKVVKYWAEKGVSGFTVYKFSLKRLEGQPLLTTNQVQFSRGRIPNSISEIRGLVCEDISWGQEGIPIPATNLVDDQPIAPTGFTYCKSMQVRKSVKLPSNAPGCGCEGTCVDPKRCACVRLNGSDFPYVHRDGGRLIEPKAVVFECGPNCGCGPECVNRTSQKGMRYRLEVFCTPKKGWGVRSWDFIPSGAPVCEYIGVLMKTDEVDPTSENNYVFDIDCLQTMKGLDGRESRLRDVSIPLPLDKNDDQKSDCVPEFCIDAGSSGNISRFINHSCQPNLFVQCVLSSHHDIKQARIVLFAADNIPPLKELTYDYGYVVDGVLGPDGKIRQMACYCGAEDCRKRLL 729
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A2R6R0T9 ((Histone-lysine N-methyltransferase {ECO:0000313|EMBL:PSS18252.1}))
Query: 28 KTQKPLKSPSQAKNKNTTTITTTTTMNVVEESE-SVPQSESESLSKRQRVEQGKEKLQIFK-----QGEDDDKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPFVENDDDKDSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
KT+KP K NK T V +E + +V S S+ ++ ++ G+EK + + +G+ +K+ +A+VT+ +R F K+YLHFVQEEE RC K EA + K+T K K + V+ K A+RPDLKAL KM ++N IL P K IGSIPG++VG QFFSR EMV+VGF++HWL GID I + + Y LPI V IV+SGQYEDDLDN +D+VYTGQGGN L GN+RQ DQV+ +GNLGLKN MDQ VPVRV+RGH+ SSYVGKVYTYDGLYKVV YW+EKGVSGF V+KFRLKR+EGQP L T+QV F G++P S+S+LRG+VCEDIS G E +PIPATNLVDDPPV PTG+ Y SI+VS++V +P A GCNC G+C + C+CA+LNGS+ PYV RDGGRLIEPKAVV+ECGPNCGCGPGCVNR SQ+GL+YRLEV+RTPKKGWAVRSWDYIPSGA VCEYIG L KTDDVD+ PENNYIFDIDCLQTMKG+ RERR+G +++P + + DD DS PEFC+DAG TGNVARFINHSCQPNLFVQCVLS HHD+ QARV+LFAADNIPP+KEL+YDY Y LDSV+ PDGK+K+L CYCGA CR+RLF
Sbjct: 67 KTEKPTKKQRLNYNKKKVISGNVQTQVVHDEGKRTVVTSNSDGDTEHKKKPNGEEKREEIENGSACKGQVGEKSVYAMVTDTIRAFNKHYLHFVQEEETRCKKDEA--DRKRTKKLKSKDA--VEEKGKAKRPDLKALTKMMDSNTILRPPKRIGSIPGVDVGHQFFSRCEMVSVGFHNHWLCGIDYIGISSKKEYPQYALPITVAIVLSGQYEDDLDNSEDVVYTGQGGNNLLGNKRQISDQVMARGNLGLKNCMDQDVPVRVIRGHQSSSSYVGKVYTYDGLYKVVKYWAEKGVSGFTVYKFRLKRMEGQPSLVTEQVYFHKGRIPNSMSELRGMVCEDISGGLENIPIPATNLVDDPPVPPTGYKYIKSIKVSKNVVVPGSASGCNCKGSCVDPRNCACARLNGSDFPYVHRDGGRLIEPKAVVFECGPNCGCGPGCVNRTSQKGLRYRLEVFRTPKKGWAVRSWDYIPSGALVCEYIGILKKTDDVDSNPENNYIFDIDCLQTMKGIGRRERRVGEVAMPSLLDKDD-DSGPEFCIDAGSTGNVARFINHSCQPNLFVQCVLSVHHDITQARVILFAADNIPPLKELTYDYGYELDSVMGPDGKVKKLACYCGAPDCRQRLF 687
Query: 94 KAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNK--KTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSR--AYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPFVE----NDDDKDSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPP----------MKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRL 645
K+A+A V E +R F +YLHFVQEEEKRC K E VK+ K K SK KKG+ + D K+ ++RPDLKA+ KM ET AIL P K G +PGI+VG QFFSRAEMVAVGF+SHWLNGID + + +L Y P+AV IV+SGQYEDDLDN +D+VYTGQGGN L GN+RQ +DQV+++GNL LKNSM+QCVPVRV+RGH SSY GKVYTYDGLYKVV+YW+EKGVSGF VFK+RL+R+EGQP+LTT+QV F+ G P+S S++RGLVCEDIS QE + IPATNLVDDPPVAPTG++Y SIQVS+ V+LP+ A GC+C G C KTC+CA+LNGS+ PYV RDGGRLIE KAVV+ECGP CGCGPGCVNR SQRG KYRLEV+RTPKKGWAVRSWDYIPSGAP+CEY G LM+TD++D + ENN+IF+IDCLQTMKGLDGRERRLG + IP +D+ +S PEFC+DAG GNVARFINHSC+PNLFVQCVLS+HHD+K ARVVLFAADNIPP M EL+YDY YALDSV+ PDGKIK++LCYCGAA CRKRL
Sbjct: 135 KSAYARVKETIRVFNTHYLHFVQEEEKRCKKVE-VKDLKIAKGSKSKKGDACEEDIKRSSKRPDLKAITKMMETKAILYPGKRFGQLPGIDVGHQFFSRAEMVAVGFHSHWLNGIDYMGQSYKKLMEYSGYTFPLAVAIVLSGQYEDDLDNSEDVVYTGQGGNNLLGNKRQVQDQVMDRGNLALKNSMEQCVPVRVIRGHGSASSYCGKVYTYDGLYKVVNYWAEKGVSGFTVFKYRLRRIEGQPILTTNQVHFSRGHAPRSFSEIRGLVCEDISGDQEDIHIPATNLVDDPPVAPTGYSYSKSIQVSKSVKLPMNATGCDCKGTCVDPKTCACARLNGSDFPYVRRDGGRLIEAKAVVFECGPKCGCGPGCVNRTSQRGSKYRLEVFRTPKKGWAVRSWDYIPSGAPICEYTGVLMRTDEIDNVSENNFIFEIDCLQTMKGLDGRERRLGDVCIPASHPDKTDDNRSESVPEFCIDAGSIGNVARFINHSCEPNLFVQCVLSSHHDVKLARVVLFAADNIPPLQKRGFDEGEMLELTYDYGYALDSVIGPDGKIKEMLCYCGAADCRKRL 704
Query: 93 DKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEA-VKNNKKTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPFVEN-----DDDKDSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
+K+A A V E LR F K+YLHFVQEEE RC K E K K+ K KKG VD+KK A+RPDLKA+ KM ETNAI+ P K IG + GI VG QF+SRAEMVAVGF+SHWLNGID + + S+ Y P+A+ IV+SG YEDDLDN +D++YTGQGG+ L GN+RQ RDQV+E+GNL LKN ++Q VPVRV+RGHE SSY GKVYTYDGLYKVV YW+EKG+SGF VFK+RL+R EGQP+LTT+QVQF G+VP+S+S++RGLVCEDIS G+E VPIPATNLVDDPPV PTGFTY S+QVS+ ++LP A+GC+C G C +TC+CA+LNG++ PYV RDGGRLIE KA+VYECGPNCGCGP CVNR SQRGLKYR EV+R+PKKGWAVRSWD+IPSGAP+CEY+G LM+T+D+D++ +NNYIF+IDCLQTM GL GRERRLG +S+P + N D +S PEFC+DAG TGN+ARFINHSC+PNLFVQCVLS+HHDLK ARV+LFAADNIPP++EL+YDY YALDSV PDGKIKQ+ CYCGAA CRKRLF
Sbjct: 129 EKSAHARVKETLRLFNKHYLHFVQEEETRCQKEEVDKKKASKSKKSKKGNATKVDAKKKAKRPDLKAISKMLETNAIMYPEKKIGDLAGINVGHQFYSRAEMVAVGFHSHWLNGIDYMGMSYSKEYADYTFPLAIAIVLSGMYEDDLDNAEDVIYTGQGGHDLTGNKRQIRDQVMERGNLALKNCVEQGVPVRVIRGHESASSYSGKVYTYDGLYKVVQYWAEKGISGFTVFKYRLRRFEGQPILTTNQVQFIYGRVPQSISEIRGLVCEDISGGREDVPIPATNLVDDPPVPPTGFTYRKSLQVSKSIKLPTSAVGCDCKGGCVDPRTCACAQLNGTDFPYVHRDGGRLIEAKAIVYECGPNCGCGPHCVNRTSQRGLKYRFEVFRSPKKGWAVRSWDFIPSGAPICEYVGVLMRTEDLDSVLDNNYIFEIDCLQTMSGLGGRERRLGDVSVPTINNSNRPEDQKSESVPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHHDLKLARVMLFAADNIPPLQELTYDYGYALDSVTGPDGKIKQMACYCGAADCRKRLF 689
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A124S3J1 ((Histone H3-K9 methyltransferase, plant {ECO:0000313|EMBL:KVH65602.1}))
Query: 8 DKSTISEISSPYDKRRSPGIKTQKPLKSPSQAKNKNTTTITTTTTMNVVEESESVPQSESESLSKRQRVEQGKEKLQIFKQGEDDDKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSKPKKG-ETLDVDSKKG-ARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQV---------------------QFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIP-FVENDDDKDSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
++ ++++ P K++ QK + Q + I T T N +E + + E ++ + +E G +G+ +++A+A+VT+ +R F K+YL+FVQ EE RC K E + K K KK + D +K A+RPDLKAL KM +N ILCP K IGSIPGI+VG QFFSR EMV VGF++HWLNGID I + + Y LPI V IV+SGQYEDDLDNC+D+VYTGQGGN L GN+RQ DQV+++GNLGLKN +DQ VPVRV+RGH+ SSYVGKVYTYDGLYKVV +W+EKGVSGF VFKF+LKR+EGQP L T+QV FA G++P SVS++RGLVCEDIS G E +PIPATNLVDDP VAPTG+TYC SIQVS+ V LP A GCNC G+C + C+CA+LNGS+ PYV RDGGRLIEPKAVV+ECGPNCGCG CVNR SQRGL+YRLEV+RTPKKGWAVRSWDYIPSGAPVCEYIG L KTDDVD+ PENNYIFDIDCLQTMKG+ GRERR+G +++P ++ DD+KDS PEFC+DAG TGNVARFINHSCQPNLFVQCVLS HHD+ QARV+LFAADNIPP+KEL+YDY Y L+SV+ PDGK+KQL C+CGA CRKRLF
Sbjct: 58 EEDSLTKADKPVRKKQRLNHHKQKGIAGNVQTQLVQDEGILTGVTSNSDGGTEHTEKLKGEDIT--EEIETGSTS-----KGQVGERSAYAMVTDTIRAFNKHYLYFVQVEESRCKKDEDDRKKPKKPKSKKFVQNQDATEEKAKAKRPDLKALSKMMTSNTILCPQKRIGSIPGIDVGHQFFSRCEMVTVGFHNHWLNGIDYIGQSSQKEYPQYKLPITVAIVLSGQYEDDLDNCEDVVYTGQGGNNLLGNKRQISDQVMKRGNLGLKNCLDQDVPVRVIRGHQSSSSYVGKVYTYDGLYKVVKHWAEKGVSGFTVFKFQLKRIEGQPSLVTEQVPMLAHGSFKKSIPEHNYIIDVHFAHGRIPSSVSEIRGLVCEDISGGLENIPIPATNLVDDPAVAPTGYTYCKSIQVSKSVVLPTSASGCNCQGSCTDPRNCACARLNGSDFPYVHRDGGRLIEPKAVVFECGPNCGCGLTCVNRTSQRGLRYRLEVFRTPKKGWAVRSWDYIPSGAPVCEYIGILKKTDDVDSNPENNYIFDIDCLQTMKGIGGRERRVGEVAMPSLLDKDDEKDSGPEFCIDAGGTGNVARFINHSCQPNLFVQCVLSVHHDITQARVILFAADNIPPLKELTYDYGYELNSVLGPDGKVKQLACFCGAPDCRKRLF 714
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A6P6VHV3 ((histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X1 {ECO:0000313|RefSeq:XP_027102120.1}))
Query: 93 DKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPF-VENDDDK--DSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
+++A A VTE LR F K YLHFVQEEEKRC K + + NK S PK+ D D+K+G++RPDLKA+ KM+ET ++L P K IGSIPGI+VG QFFSRAEMV +GF+SHWLNGID I A Y LP+AV IV+SGQYEDDLDN ++IVYTGQGGN L G++RQ +DQV+ GNLGLKN ++ VPVRVVRGH+C +SYVGKVYTYDGLYKVV+YW+EKGVSGF V+KFRLKRLEGQP LTT QV + +VP S++++RGLVC+DI+ GQE +PIPATNLVDDPPV PTGFTY ++ +++V+LPL A GC+C G C C+CAKLNGS+ PYV RDGGRLIEPKAVV+EC PNCGCGPGCVNRISQRGLKYRLEV+RTP +GW VR WDYIPSGAP+CEYIG+L KTDD+D+ N+YIFDIDCLQTMKGLDGRERRL +S+P +ENDDDK +S PEFC+DAG GNVARFINHSCQPNLFVQC+LS HHD+K ARVVL AADNIPP+KEL+YDY YALDSV PDG IKQ+ CYCGAA CRKRLF
Sbjct: 141 ERSASASVTETLRQFNKCYLHFVQEEEKRCGKLDDRQKNK-ASCPKENIAED-DTKRGSKRPDLKAITKMKETCSVLNPTKMIGSIPGIDVGHQFFSRAEMVVLGFHSHWLNGIDYIGQARRSDLGDYKLPLAVSIVLSGQYEDDLDNFEEIVYTGQGGNNLLGDKRQIKDQVMRLGNLGLKNCIEHSVPVRVVRGHKCTNSYVGKVYTYDGLYKVVNYWAEKGVSGFTVYKFRLKRLEGQPPLTTSQVHYTRSRVPDSIAEIRGLVCKDITGGQEDIPIPATNLVDDPPVPPTGFTYHKDMKFAKNVKLPLNASGCSCRGTCTDPGVCACAKLNGSDFPYVFRDGGRLIEPKAVVFECNPNCGCGPGCVNRISQRGLKYRLEVFRTPNRGWGVRCWDYIPSGAPICEYIGRLTKTDDIDSAAGNSYIFDIDCLQTMKGLDGRERRLRDVSLPVNLENDDDKMSESVPEFCIDAGSAGNVARFINHSCQPNLFVQCILSTHHDIKLARVVLIAADNIPPLKELTYDYGYALDSVAGPDGIIKQMPCYCGAADCRKRLF 696
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A6J1EK99 ((histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4-like isoform X2 {ECO:0000313|RefSeq:XP_022928431.1}))
Query: 35 SPSQAKNKNTTTITTTTTMN----VVEESESVPQSESESLSKRQRVEQGKEKLQIFKQGEDDD--------KAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPF---VENDDDK--DSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
SPS+ K KN + T + V +++ +VP S + SK + E + K D+ K+ A V E LR F KYYLHFVQEEE+RC K E + K SK K D SK+ +RPDLKA+ KM E N IL P K IG IPGI +G +F+SRAEMVAVGF+SHWLNGID + + S++ Y+ P+AV IV+SG YEDDLDN +D+VYTGQGG L GN+RQ RDQV+E+GNL LKN ++Q VPVRV+RGHE SSY GK+YTYDGLYKV+ YW+EKG+SGF VFKFRL+R+EGQ LLTT+QVQF G+VPKSVS++RGLVCEDI+ QE +PIPATNLVDDPPVAPTGFTYC SI+V V+LP A GC+CSG+C S+TCSCAKLNG + PYV RDGGRLIE K VVYECGPNCGCGPGCVNR SQRG+KYRLEV+RTPKKGWAVRSWD+IPSGAPVCEY G L +TDD+D + ENNYIFDIDCLQT++G GR RR S+P V+ DD+ +S PEFC+DA TGN+ARFINHSC+PNLFVQCVLS+HHD+K ARVVLFAA+NIPP++EL+YDY YALDSV DGKIKQ+ C+CGA CRKRLF
Sbjct: 87 SPSKRKKKNGPVRSKRNTKSKDKAVEDKAVAVPVSNDVTKSKDGGASEPMEVCALEKSTTADEGGPANVVEKSDHAKVKETLRLFNKYYLHFVQEEEQRCKKAEVAQKVSKGSKSKAAPEEDTKSKR--KRPDLKAITKMMEANEILNPEKRIGDIPGISIGHRFYSRAEMVAVGFHSHWLNGIDYMGMSYSKMYSNYSFPVAVSIVLSGMYEDDLDNAEDVVYTGQGGQDLTGNKRQIRDQVMERGNLALKNCIEQAVPVRVLRGHESASSYCGKLYTYDGLYKVIQYWAEKGISGFTVFKFRLRRIEGQSLLTTNQVQFVYGRVPKSVSEIRGLVCEDITGSQEDIPIPATNLVDDPPVAPTGFTYCKSIKVGHGVKLPSNANGCDCSGSCISSRTCSCAKLNGLDFPYVHRDGGRLIEAKDVVYECGPNCGCGPGCVNRTSQRGIKYRLEVFRTPKKGWAVRSWDFIPSGAPVCEYTGILSRTDDLDHVSENNYIFDIDCLQTIRGFGGRMRRSRDASLPANNSVDGIDDQRSESVPEFCVDACSTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGSDGKIKQMPCFCGATECRKRLF 714
BLAST of XM_017375157.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR Match: A0A6J1D471 ((histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X2 {ECO:0000313|RefSeq:XP_022148117.1}))
Query: 28 KTQKPLKSPSQAKNKNTTTITTTTTMNVVEESESVPQSESESLSKRQRVEQGKEKLQIFKQGEDD---DKAAFAVVTEALRTFYKYYLHFVQEEEKRCAKPEAVKNNKKTSKPKKGETLDVDSKKGARRPDLKALVKMRETNAILCPNK-IGSIPGIEVGKQFFSRAEMVAVGFNSHWLNGIDCISHAGSELSRAYNLPIAVVIVMSGQYEDDLDNCDDIVYTGQGGNKLCGNRRQFRDQVLEKGNLGLKNSMDQCVPVRVVRGHECKSSYVGKVYTYDGLYKVVSYWSEKGVSGFNVFKFRLKRLEGQPLLTTDQVQFAGGQVPKSVSDLRGLVCEDISYGQEKVPIPATNLVDDPPVAPTGFTYCNSIQVSEHVELPLKALGCNCSGNCAYSKTCSCAKLNGSNLPYVLRDGGRLIEPKAVVYECGPNCGCGPGCVNRISQRGLKYRLEVYRTPKKGWAVRSWDYIPSGAPVCEYIGKLMKTDDVDAIPENNYIFDIDCLQTMKGLDGRERRLGGMSIPFVE-----NDDDKDSAPEFCLDAGPTGNVARFINHSCQPNLFVQCVLSNHHDLKQARVVLFAADNIPPMKELSYDYAYALDSVVDPDGKIKQLLCYCGAAVCRKRLF 646
KT ++S A + T NVV S+ V + + ++ S+ R EK + G +K+ V E LR F K+YLHFVQEEEKRC K E + K SK K D +K ++RPDLKA+ KM E N IL K IG+IPG+ +G +F+SRAEMVAVGF+SHWLNGID + + S++ Y+ P+AV IV+SG YEDDLDN +D+VYTGQGG L GN+RQ RDQ +E+GNL LKN ++Q VPVRVVRGHEC SSY GK+YTYDGLYKV+ YW+EKG+SGF VFKFRL+R+EGQ LLTT+QVQF G+VPKSVS++RGLVCEDI+ GQE VPIPATNLVDDPPVAPTGFTYC SI+V+ V+LP A GC+CSG+C S+TCSCAKLNG + PYV RDGGRLIE K VVYECGPNCGCGPGCVNR SQRG+KYRLEV+RTPKKGWAVRSWD+IPSGAPVCEYIG L +T+D+D + ENNYIFDIDCLQT++G+ GRERR S+P +D +S PEFC+DA TGN+ARFINHSC+PNLFVQCVLS+HHD+K ARVVLFAA+NIPP++EL+YDY YALDSV PDGK+KQ+ C+CGA CRKRLF
Sbjct: 91 KTNDQVRSRRNAVSDGGKTAEDNDNDNVVSVSKDVTKHKDDNASE-PREMCSPEKSKALVDGAPASLVEKSDHVKVKETLRLFNKHYLHFVQEEEKRCKKAEVAEKASKGSKSKVAPVEDAKNK--SKRPDLKAISKMLEANEILNHEKRIGNIPGVNIGHRFYSRAEMVAVGFHSHWLNGIDYMGMSYSKMYSNYSFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGQNLTGNKRQIRDQKMERGNLALKNCIEQAVPVRVVRGHECASSYCGKLYTYDGLYKVIQYWAEKGISGFTVFKFRLRRIEGQSLLTTNQVQFIYGRVPKSVSEIRGLVCEDITGGQENVPIPATNLVDDPPVAPTGFTYCKSIKVAHGVKLPSNANGCDCSGSCIASRTCSCAKLNGLDFPYVHRDGGRLIEAKDVVYECGPNCGCGPGCVNRTSQRGIKYRLEVFRTPKKGWAVRSWDFIPSGAPVCEYIGILTRTEDLDHVSENNYIFDIDCLQTIRGIGGRERRSKDASLPANNSLDGIDDQRSESVPEFCIDACFTGNIARFINHSCEPNLFVQCVLSSHHDIKLARVVLFAAENIPPLQELTYDYGYALDSVYGPDGKLKQMPCFCGATECRKRLF 715
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.
There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.
LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.
Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.
RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.
The NCBI Sequence report lists the correspondences between the various naming methods
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.