Resource Type:
Polypeptide
Name:
XM_017401279.1
Identifier:
XM_017401279.1-protein
Sequence:
MYSVSRWYRVWEKFIVLYAIYSSFFTPFEFGFFRGLPQNLFLLDVVGQVA
FVCDMVLQFFVAYRDSVTYKMIYNRSAIALRYLKSHFIVDFLGCLPWDIL
YKASGSSEEVRFLLWIRLSRTRKVLAFLHKLEKDIRINYLFCRILKLLIV
EIYCTHTAACIFYYLATSMPADKEGYTWIGSLQLGDHSYSNFREINLWKR
YLTSLYFSIITMATVGYGDIHAVNPREMIFVMIYVSLDMVLGAYLIGNIT
ALIVKGSKTERYRDKMSDIFKYLSRNRLGKDIRRLIKDHLRLQYECSYTD
SAVLRDLPISIRAKISQNLYKPYVEKVVLFKECSAEFISQIVNRVCEEFF
FPGELIMEQGDAVDHIYIVCHGVLEEVTVRDNGAEEEVALLQPSSLFGVV
SILCNIPQPYTIRVRDLCRLLRLDKQIFSNILQIYVDDEQRIITNIREGR
VNLHVKQLESDITFHIGKREAELATQVNSAAYHGDLLQLKGLIRAGADPN
KKDYGGRSPLHLAASRGHEDITIFLIQESVDINIIDNFGNTPLFEAIKGG
HGQVASLLIKEGAVLKVDDAGTFLCTTVARGDIDFIKRALSSGVDPNSKD
YDHRTPLHVAASQGFYLLAKLLLEAGASVLLKDRWGNTPLDESKMSGSKR
LIELLEEAKSIQLCEFTDRSQDITANLPTKKCTVFPFHPQKPMDSDRYGV
ILWVPRTIGELIETAAKQLNFSPNSFIVSEDAGKLLDVNMISDGQKLYLI
NER
Sequence Length:
753
Sequence Checksum:
842fd05ea806bb7dface2235cf036cdd
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017401279.1, derives from mRNA, XM_017401279.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017401279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017401279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9GNW1 ((K+-channel ERG {ECO:0000313|EMBL:PIN06938.1}))
HSP 1 Score: 1147.88 bits (2968), Expect = 0.000e+0
Identity = 534/750 (71.20%), Postives = 648/750 (86.40%), Query Frame = 0
Match: A0A2G9GNW1 ((K+-channel ERG {ECO:0000313|EMBL:PIN06938.1}))
HSP 1 Score: 1147.88 bits (2968), Expect = 0.000e+0
Identity = 534/750 (71.20%), Postives = 648/750 (86.40%), Query Frame = 0
Query: 5 SRWYRVWEKFIVLYAIYSSFFTPFEFGFFRGLPQNLFLLDVVGQVAFVCDMVLQFFVAYRDSVTYKMIYNRSAIALRYLKSHFIVDFLGCLPWDILYKASGSSEEVRFLLWIRLSRTRKVLAFLHKLEKDIRINYLFCRILKLLIVEIYCTHTAACIFYYLATSMPADKEGYTWIGSLQLGDHSYSNFREINLWKRYLTSLYFSIITMATVGYGDIHAVNPREMIFVMIYVSLDMVLGAYLIGNITALIVKGSKTERYRDKMSDIFKYLSRNRLGKDIRRLIKDHLRLQYECSYTDSAVLRDLPISIRAKISQNLYKPYVEKVVLFKECSAEFISQIVNRVCEEFFFPGELIMEQGDAVDHIYIVCHGVLEEVTVRDNGAEEEVALLQPSSLFGVVSILCNIPQPYTIRVRDLCRLLRLDKQIFSNILQIYVDDEQRIITNIREGR-VNLHVKQLESDITFHIGKREAELATQVNSAAYHGDLLQLKGLIRAGADPNKKDYGGRSPLHLAASRGHEDITIFLIQESVDINIIDNFGNTPLFEAIKGGHGQVASLLIKEGAVLKVDDAGTFLCTTVARGDIDFIKRALSSGVDPNSKDYDHRTPLHVAASQGFYLLAKLLLEAGASVLLKDRWGNTPLDESKMSGSKRLIELLEEAKSIQLCEFTDRSQDITAN-LPTKKCTVFPFHPQKPMDSDRYGVILWVPRTIGELIETAAKQLNFSPNSFIVSEDAGKLLDVNMISDGQKLYLINE 752
+RWY+VWEKFI+++AIYSSFFTP EFGFFRGLP+ LFLLD+ GQVAF+ D++LQFFV YRDS +YKM+YNR+ IALRYLKSHF D L C+PWDI+YKA G EEVR+LLWIRL+R RKV AF K+EKDIRINYLF RI+KL+ VE+YCTHTAACIFYYLAT++P +KEGYTWIGSL+LGD+SYS FREI+LWKRY TSLYF+I+TMATVGYGDIHAVN REMIF+MIYVS DM+LGAYLIGN+TALIVKGSKTERYRDKM+D+ KY++RNRLGK++R IK HLRLQYE SYTD+AVL+D+PISIRA+ISQ+LYK YVE V LFK CS++FISQIV RV EEFF PGE+IMEQG AVD +Y VCHGVLEEV + ++G+E+ V+LL+PSSLFG +SILCNIPQPYT+RV +LCRLLR+DKQ FSNIL+IY D +R++TN+ EG+ NL VKQLESDI FHIGK+EAELA +VN+AAY+GDL QLK LIR+GADPNKKDY GRS LHLAASRG+EDIT+FLIQE VDIN DNFGNTPLFEAIK G +V SLL KEGA+LK+++AG+FLCT V+RGD D ++R LS+G+DPNSKDYDHRTPLH+AASQG +L+AKLLLEAGASV KDR+GNTP+DE ++ G+K +I LLEEAK QL E SQ++ A+ + +KKCTVFPFHP +P + R+GV++WVP T+ ELI+ A+++L S I+SED GK+L+V++I+DG+KLY+INE
Sbjct: 86 NRWYKVWEKFILIWAIYSSFFTPMEFGFFRGLPEKLFLLDIAGQVAFLVDIILQFFVTYRDSHSYKMVYNRNLIALRYLKSHFFPDLLACMPWDIIYKAVGRKEEVRYLLWIRLTRVRKVTAFFQKMEKDIRINYLFTRIVKLIAVELYCTHTAACIFYYLATTLPEEKEGYTWIGSLKLGDYSYSRFREIDLWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMIYVSFDMILGAYLIGNMTALIVKGSKTERYRDKMTDLIKYMNRNRLGKELRNQIKGHLRLQYESSYTDAAVLQDIPISIRAQISQSLYKSYVENVPLFKGCSSDFISQIVTRVHEEFFLPGEVIMEQGSAVDQLYFVCHGVLEEVGIAEDGSEDTVSLLEPSSLFGEISILCNIPQPYTVRVCELCRLLRIDKQSFSNILEIYFHDGRRVLTNLLEGKESNLRVKQLESDIAFHIGKQEAELALRVNNAAYYGDLHQLKSLIRSGADPNKKDYDGRSALHLAASRGYEDITLFLIQEGVDINAEDNFGNTPLFEAIKSGQDRVTSLLSKEGALLKIENAGSFLCTVVSRGDTDLVRRVLSNGIDPNSKDYDHRTPLHIAASQGLFLMAKLLLEAGASVFSKDRYGNTPMDEGRICGNKNMITLLEEAKMAQLSEVPHSSQELIADKIHSKKCTVFPFHPWRPAEGRRHGVVMWVPNTMEELIKAASEKLELPEGSCILSEDGGKILEVDIITDGEKLYMINE 835
BLAST of XM_017401279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3Z7A8 ((potassium channel SKOR-like {ECO:0000313|RefSeq:XP_016460239.1}))
HSP 1 Score: 1147.5 bits (2967), Expect = 0.000e+0
Identity = 531/750 (70.80%), Postives = 645/750 (86.00%), Query Frame = 0
Match: A0A1S3Z7A8 ((potassium channel SKOR-like {ECO:0000313|RefSeq:XP_016460239.1}))
HSP 1 Score: 1147.5 bits (2967), Expect = 0.000e+0
Identity = 531/750 (70.80%), Postives = 645/750 (86.00%), Query Frame = 0
Query: 5 SRWYRVWEKFIVLYAIYSSFFTPFEFGFFRGLPQNLFLLDVVGQVAFVCDMVLQFFVAYRDSVTYKMIYNRSAIALRYLKSHFIVDFLGCLPWDILYKASGSSEEVRFLLWIRLSRTRKVLAFLHKLEKDIRINYLFCRILKLLIVEIYCTHTAACIFYYLATSMPADKEGYTWIGSLQLGDHSYSNFREINLWKRYLTSLYFSIITMATVGYGDIHAVNPREMIFVMIYVSLDMVLGAYLIGNITALIVKGSKTERYRDKMSDIFKYLSRNRLGKDIRRLIKDHLRLQYECSYTDSAVLRDLPISIRAKISQNLYKPYVEKVVLFKECSAEFISQIVNRVCEEFFFPGELIMEQGDAVDHIYIVCHGVLEEVTVRDNGAEEEVALLQPSSLFGVVSILCNIPQPYTIRVRDLCRLLRLDKQIFSNILQIYVDDEQRIITNIREGR-VNLHVKQLESDITFHIGKREAELATQVNSAAYHGDLLQLKGLIRAGADPNKKDYGGRSPLHLAASRGHEDITIFLIQESVDINIIDNFGNTPLFEAIKGGHGQVASLLIKEGAVLKVDDAGTFLCTTVARGDIDFIKRALSSGVDPNSKDYDHRTPLHVAASQGFYLLAKLLLEAGASVLLKDRWGNTPLDESKMSGSKRLIELLEEAKSIQLCEFTDRSQDITANLPTKKCTVFPFHPQKPMDSDRYGVILWVPRTIGELIETAAKQLNFSPNSFIVSEDAGKLLDVNMISDGQKLYLINER 753
+RWYR+WE FI++++IYSSFFTP EF FF GLP+ LFLLD+ GQ+ F+ D+VLQFFVAYRDS TYKM+Y R+ IALRYLKSHFI+DFL C+PWDI+YKA GS EEVR+LLWIRLSR R++ F K+EKDIRINYLF RI+KL+ VE+YCTHTAACIFYYLAT++ +EGYTWIGSL+LGD+SYSNFR+I+LW RY TS+YF+I+TMATVGYGDIHAVN REMIFVMIYVS DM+L AYLIGN+TALIVKGSKTERYRDKM+D+ KY++RNRLG+DIR IK HLRLQYE +YTD+AVL+D+PISIRAKISQ+LY+ Y+E V LFK CS+EFISQ+V RV EEFF PGE+IMEQG+ VD +Y VCHGVLEEV + +G+EE VALL+P+S FG +SI+CNIPQPYT+RV +LCRL+R+DKQ FSNIL+IY D +RI++N+ +G+ NL VKQLESDI FHIGK EAELA +VNSAAYHGDL QLK LIRAGADPNKKDY GRSPLHLAASRG+EDIT+FLIQE VDIN D FGNTPL EAIK GH +VASLL+KEGA LK+++AG+FLC +A+GD D ++R LS+GVDPNSKDYD RTPLHVAASQG Y +AKLLL AGASV KDRWGNTP+DE+++SG+K++I LLEEAKS QL EF D +I+ L +KCTVFPFHP + D ++GV++W+P+TI EL+ TA+++LNF +S I+SEDAGK+LD++MI+DGQKLYLIN++
Sbjct: 70 NRWYRMWENFILIWSIYSSFFTPMEFAFFNGLPRKLFLLDICGQIVFLVDIVLQFFVAYRDSQTYKMVYKRTPIALRYLKSHFILDFLSCMPWDIIYKAVGSKEEVRYLLWIRLSRARRITYFFQKMEKDIRINYLFTRIVKLITVELYCTHTAACIFYYLATTLSEQQEGYTWIGSLKLGDYSYSNFRDIDLWTRYTTSMYFAIVTMATVGYGDIHAVNLREMIFVMIYVSFDMILSAYLIGNMTALIVKGSKTERYRDKMTDLLKYMNRNRLGRDIRNQIKGHLRLQYESAYTDAAVLQDIPISIRAKISQSLYQSYIENVPLFKGCSSEFISQVVTRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGIAKDGSEETVALLEPNSSFGDISIVCNIPQPYTVRVCELCRLIRIDKQSFSNILEIYFHDGRRILSNLLQGKESNLRVKQLESDIAFHIGKHEAELALKVNSAAYHGDLHQLKSLIRAGADPNKKDYDGRSPLHLAASRGYEDITLFLIQEGVDINAPDKFGNTPLLEAIKSGHDRVASLLVKEGAFLKIENAGSFLCMVIAKGDSDLLRRLLSNGVDPNSKDYDQRTPLHVAASQGLYSMAKLLLGAGASVFTKDRWGNTPVDEARVSGNKQMIGLLEEAKSAQLSEFPDVPHEISEKLRPRKCTVFPFHPWESKDVRKHGVVMWIPQTIEELVTTASEKLNFPSDSCILSEDAGKILDIDMIADGQKLYLINDQ 819
BLAST of XM_017401279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7YFZ4 ((potassium channel SKOR-like {ECO:0000313|RefSeq:XP_009802068.1}))
HSP 1 Score: 1147.11 bits (2966), Expect = 0.000e+0
Identity = 531/750 (70.80%), Postives = 644/750 (85.87%), Query Frame = 0
Match: A0A1U7YFZ4 ((potassium channel SKOR-like {ECO:0000313|RefSeq:XP_009802068.1}))
HSP 1 Score: 1147.11 bits (2966), Expect = 0.000e+0
Identity = 531/750 (70.80%), Postives = 644/750 (85.87%), Query Frame = 0
Query: 5 SRWYRVWEKFIVLYAIYSSFFTPFEFGFFRGLPQNLFLLDVVGQVAFVCDMVLQFFVAYRDSVTYKMIYNRSAIALRYLKSHFIVDFLGCLPWDILYKASGSSEEVRFLLWIRLSRTRKVLAFLHKLEKDIRINYLFCRILKLLIVEIYCTHTAACIFYYLATSMPADKEGYTWIGSLQLGDHSYSNFREINLWKRYLTSLYFSIITMATVGYGDIHAVNPREMIFVMIYVSLDMVLGAYLIGNITALIVKGSKTERYRDKMSDIFKYLSRNRLGKDIRRLIKDHLRLQYECSYTDSAVLRDLPISIRAKISQNLYKPYVEKVVLFKECSAEFISQIVNRVCEEFFFPGELIMEQGDAVDHIYIVCHGVLEEVTVRDNGAEEEVALLQPSSLFGVVSILCNIPQPYTIRVRDLCRLLRLDKQIFSNILQIYVDDEQRIITNIREGR-VNLHVKQLESDITFHIGKREAELATQVNSAAYHGDLLQLKGLIRAGADPNKKDYGGRSPLHLAASRGHEDITIFLIQESVDINIIDNFGNTPLFEAIKGGHGQVASLLIKEGAVLKVDDAGTFLCTTVARGDIDFIKRALSSGVDPNSKDYDHRTPLHVAASQGFYLLAKLLLEAGASVLLKDRWGNTPLDESKMSGSKRLIELLEEAKSIQLCEFTDRSQDITANLPTKKCTVFPFHPQKPMDSDRYGVILWVPRTIGELIETAAKQLNFSPNSFIVSEDAGKLLDVNMISDGQKLYLINER 753
+RWYR+WE FI++++IYSSFFTP EF FF GLP+ LFLLD+ GQ+ F+ D+VLQFFVAYRDS TYKM+Y R+ IALRYLKSHFI+DFL C+PWDI+YKA GS EEVR+LLWIRLSR R++ F K+EKDIRINYLF RI+KL+ VE+YCTHTAACIFYYLAT++ +EGYTWIGSL+LGD+SYSNFR+I+LW RY TS+YF+I+TMATVGYGDIHAVN REMIFVMIYVS DM+L AYLIGN+TALIVKGSKTERYRDKM+D+ KY++RNRLG+DIR IK HLRLQYE +YTD+AVL+D+PISIRAKISQ+LY+ Y+E V LFK CS+EFISQ+V RV EEFF PGE+IMEQG+ VD +Y VCHGVLEEV + +G+EE VALL+P+S FG +SI+CNIPQPYT+RV LCRL+R+DKQ FSNIL+IY D +RI++N+ +G+ NL VKQLESDI FHIGK EAELA +VNSAAYHGDL QLK LIRAGADPNKKDY GRSPLHLAASRG+EDIT+FLIQE VDIN D FGNTPL EAIK GH +VASLL+KEGA LK+++AG+FLC +A+GD D ++R LS+GVDPNSKDYD RTPLHVAASQG Y +AKLLL AGASV KDRWGNTP+DE+++SG+K++I LLEEAKS QL EF D +I+ L +KCTVFPFHP + D ++GV++W+P+TI EL+ TA+++LNF +S I+SEDAGK+LD++MI+DGQKLYLIN++
Sbjct: 70 NRWYRMWENFILIWSIYSSFFTPMEFAFFNGLPRKLFLLDICGQIVFLVDIVLQFFVAYRDSQTYKMVYKRTPIALRYLKSHFILDFLSCMPWDIIYKAVGSKEEVRYLLWIRLSRARRITYFFQKMEKDIRINYLFTRIVKLITVELYCTHTAACIFYYLATTLSEQQEGYTWIGSLKLGDYSYSNFRDIDLWTRYTTSMYFAIVTMATVGYGDIHAVNLREMIFVMIYVSFDMILSAYLIGNMTALIVKGSKTERYRDKMTDLLKYMNRNRLGRDIRNQIKGHLRLQYESAYTDAAVLQDIPISIRAKISQSLYQSYIENVPLFKGCSSEFISQVVTRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGIAKDGSEETVALLEPNSSFGDISIVCNIPQPYTVRVCQLCRLIRIDKQSFSNILEIYFHDGRRILSNLLQGKESNLRVKQLESDIAFHIGKHEAELALKVNSAAYHGDLHQLKSLIRAGADPNKKDYDGRSPLHLAASRGYEDITLFLIQEGVDINAPDKFGNTPLLEAIKSGHDRVASLLVKEGAFLKIENAGSFLCMVIAKGDSDLLRRLLSNGVDPNSKDYDQRTPLHVAASQGLYSMAKLLLGAGASVFTKDRWGNTPVDEARVSGNKQMIGLLEEAKSAQLSEFPDVPHEISEKLRPRKCTVFPFHPWESKDVRKHGVVMWIPQTIEELVTTASEKLNFPSDSCILSEDAGKILDIDMIADGQKLYLINDQ 819
BLAST of XM_017401279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A314KXX1 ((Potassium channel skor {ECO:0000313|EMBL:OIT34005.1}))
HSP 1 Score: 1147.11 bits (2966), Expect = 0.000e+0
Identity = 531/750 (70.80%), Postives = 646/750 (86.13%), Query Frame = 0
Match: A0A314KXX1 ((Potassium channel skor {ECO:0000313|EMBL:OIT34005.1}))
HSP 1 Score: 1147.11 bits (2966), Expect = 0.000e+0
Identity = 531/750 (70.80%), Postives = 646/750 (86.13%), Query Frame = 0
Query: 5 SRWYRVWEKFIVLYAIYSSFFTPFEFGFFRGLPQNLFLLDVVGQVAFVCDMVLQFFVAYRDSVTYKMIYNRSAIALRYLKSHFIVDFLGCLPWDILYKASGSSEEVRFLLWIRLSRTRKVLAFLHKLEKDIRINYLFCRILKLLIVEIYCTHTAACIFYYLATSMPADKEGYTWIGSLQLGDHSYSNFREINLWKRYLTSLYFSIITMATVGYGDIHAVNPREMIFVMIYVSLDMVLGAYLIGNITALIVKGSKTERYRDKMSDIFKYLSRNRLGKDIRRLIKDHLRLQYECSYTDSAVLRDLPISIRAKISQNLYKPYVEKVVLFKECSAEFISQIVNRVCEEFFFPGELIMEQGDAVDHIYIVCHGVLEEVTVRDNGAEEEVALLQPSSLFGVVSILCNIPQPYTIRVRDLCRLLRLDKQIFSNILQIYVDDEQRIITNIREGR-VNLHVKQLESDITFHIGKREAELATQVNSAAYHGDLLQLKGLIRAGADPNKKDYGGRSPLHLAASRGHEDITIFLIQESVDINIIDNFGNTPLFEAIKGGHGQVASLLIKEGAVLKVDDAGTFLCTTVARGDIDFIKRALSSGVDPNSKDYDHRTPLHVAASQGFYLLAKLLLEAGASVLLKDRWGNTPLDESKMSGSKRLIELLEEAKSIQLCEFTDRSQDITANLPTKKCTVFPFHPQKPMDSDRYGVILWVPRTIGELIETAAKQLNFSPNSFIVSEDAGKLLDVNMISDGQKLYLINER 753
+RWYR+WE FI++++IYSSFFTP EF FF GLP+ LFLLD+ GQ+ F+ D+VLQFFVAYRDS TYKM+Y R+ IALRYLKSHFI+DFL C+PWDI+YKA GS EEVR+LLWIRLSR R++ F K+EKDIRINYLF RI+KL+ VE+YCTHTAACIFYYLAT++ +EGYTWIGSL+LGD+SYSNFR+I+LW RY TS+YF+I+TMATVGYGDIHAVN REMIFVMIYVS DM+L AYLIGN+TALIVKGSKTERYRDKM+D+ KY++RNRLG+DIR IK HLRLQYE +YTD+AVL+D+PISIRAKISQ+LY+ Y+E V LFK CS+EFISQ+V RV EEFF PGE+IMEQG+ VD +Y VCHGVLEEV + +G+EE VALL+P+S FG +SI+CNIPQPYT+RV +LCRLLR+DKQ FSNIL+IY D +RI++N+ +G+ NL VKQLESDI FHIGK EAELA +VNSAAYHGDL QLK LIRAGADPNKKDY GRSPLHLAASRG+EDIT+FLIQE VDIN+ D FGNTPL EAIK GH +VASLL+KEGA+LK+++AG+FLC +A+GD D ++R LS+GVDPNSKDYD RTPLHVAASQG Y +AKLLL AGASV KDRWGNTP+DE+++SG+K++I LLEEAKS QL EF D +++ L +KCTVFPFHP + D ++GV++W+P+TI EL+ TA+++LNF +S I+SEDAGK+LD++MI DGQKLYLIN++
Sbjct: 69 NRWYRMWENFILIWSIYSSFFTPMEFAFFNGLPRKLFLLDICGQIVFLVDIVLQFFVAYRDSQTYKMVYKRTPIALRYLKSHFILDFLSCMPWDIIYKAVGSKEEVRYLLWIRLSRARRITYFFQKMEKDIRINYLFTRIVKLITVELYCTHTAACIFYYLATTLSEQQEGYTWIGSLKLGDYSYSNFRDIDLWTRYTTSMYFAIVTMATVGYGDIHAVNLREMIFVMIYVSFDMILSAYLIGNMTALIVKGSKTERYRDKMTDLLKYMNRNRLGRDIRNQIKGHLRLQYESAYTDAAVLQDIPISIRAKISQSLYQSYIENVPLFKGCSSEFISQVVTRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGIAKDGSEETVALLEPNSSFGDISIVCNIPQPYTVRVCELCRLLRIDKQSFSNILEIYFHDGRRILSNLLQGKESNLRVKQLESDIAFHIGKHEAELALKVNSAAYHGDLHQLKSLIRAGADPNKKDYDGRSPLHLAASRGYEDITLFLIQEGVDINVPDKFGNTPLLEAIKSGHDRVASLLVKEGALLKIENAGSFLCMVIAKGDSDLLRRLLSNGVDPNSKDYDQRTPLHVAASQGLYSMAKLLLGAGASVFTKDRWGNTPVDEARVSGNKQMIGLLEEAKSAQLSEFPDVPHEMSEKLRPRKCTVFPFHPWESKDVRKHGVVMWIPQTIEELVTTASEKLNFPSDSCILSEDAGKILDIDMIVDGQKLYLINDQ 818
BLAST of XM_017401279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7V8F0 ((potassium channel SKOR-like {ECO:0000313|RefSeq:XP_009762658.1}))
HSP 1 Score: 1145.95 bits (2963), Expect = 0.000e+0
Identity = 528/753 (70.12%), Postives = 650/753 (86.32%), Query Frame = 0
Match: A0A1U7V8F0 ((potassium channel SKOR-like {ECO:0000313|RefSeq:XP_009762658.1}))
HSP 1 Score: 1145.95 bits (2963), Expect = 0.000e+0
Identity = 528/753 (70.12%), Postives = 650/753 (86.32%), Query Frame = 0
Query: 1 MYSVSRWYRVWEKFIVLYAIYSSFFTPFEFGFFRGLPQNLFLLDVVGQVAFVCDMVLQFFVAYRDSVTYKMIYNRSAIALRYLKSHFIVDFLGCLPWDILYKASGSSEEVRFLLWIRLSRTRKVLAFLHKLEKDIRINYLFCRILKLLIVEIYCTHTAACIFYYLATSMPADKEGYTWIGSLQLGDHSYSNFREINLWKRYLTSLYFSIITMATVGYGDIHAVNPREMIFVMIYVSLDMVLGAYLIGNITALIVKGSKTERYRDKMSDIFKYLSRNRLGKDIRRLIKDHLRLQYECSYTDSAVLRDLPISIRAKISQNLYKPYVEKVVLFKECSAEFISQIVNRVCEEFFFPGELIMEQGDAVDHIYIVCHGVLEEVTVRDNGAEEEVALLQPSSLFGVVSILCNIPQPYTIRVRDLCRLLRLDKQIFSNILQIYVDDEQRIITNIREGR-VNLHVKQLESDITFHIGKREAELATQVNSAAYHGDLLQLKGLIRAGADPNKKDYGGRSPLHLAASRGHEDITIFLIQESVDINIIDNFGNTPLFEAIKGGHGQVASLLIKEGAVLKVDDAGTFLCTTVARGDIDFIKRALSSGVDPNSKDYDHRTPLHVAASQGFYLLAKLLLEAGASVLLKDRWGNTPLDESKMSGSKRLIELLEEAKSIQLCEFTDRSQDITANLPTKKCTVFPFHPQKPMDSDRYGVILWVPRTIGELIETAAKQLNFSPNSFIVSEDAGKLLDVNMISDGQKLYLINE 752
+Y RWY++WEKFI+++AIYSSFFTP EF FF+GLP+ LFLLD+ GQ+AF+ D+V+QFFVAYRDS TYKM++ R+ IALRYLK+HFI+DFL C+PWD +YKA+G E +R+LLWIRLSR R+V F K+EKDIRINYLF RILKL++VE+YCTHTAACIFY+LAT++P +KEGYTWIGSL LGD+SYS+FREI+LW+RY+TSLYF+I+TMATVGYGDIHAVN REMIFVMIYVS DM+LGAYLIGN+TALIVKGSKT RYRDKM+D+ Y++RNRLG+DIR IKDHLRLQYE +YTD+AVL+DLPISIRAKISQ LY+ +E + LF++CS+EFISQIV RVCEEFF PGE+IMEQG VD +Y VCHGVLEE+ + ++G+EE VALL+P+S FG +SILCNIPQPYT+RV +LCRL+R+DKQ FSNIL+IY D +RI+TN+ EG+ +L VKQ+ESDITFHIGK+EAELA +VNSAAYHGDL QLKGLIRAGADPNKKDY GRSPLHLAASRG+EDI++FLIQE VD+N DNF TPLFEAIK GH +VASLL+KEGA LK+++AG+FLC VA+GD D ++R LS+G+DPNSKDYDHRTPLHVAASQG + +A+LLL AGASV KDRWGNTP DE+++SG+ +L +LLEEAKS Q+ EF +I+ + +KCTVFPFHP +P D ++GV+LW+P+++ ELI TA++QLNF S I+SEDAGK+LD+ +ISDGQKLYLI+E
Sbjct: 73 IYPDDRWYKIWEKFILIWAIYSSFFTPMEFAFFKGLPRKLFLLDICGQIAFLVDIVVQFFVAYRDSQTYKMVHKRTPIALRYLKTHFILDFLSCMPWDNIYKAAGKKEGLRYLLWIRLSRVRRVNDFFQKMEKDIRINYLFTRILKLIVVELYCTHTAACIFYFLATTLPEEKEGYTWIGSLTLGDYSYSHFREIDLWRRYITSLYFAIVTMATVGYGDIHAVNLREMIFVMIYVSFDMILGAYLIGNMTALIVKGSKTVRYRDKMTDLMNYMNRNRLGRDIRTQIKDHLRLQYESAYTDAAVLQDLPISIRAKISQTLYQSCIENIPLFRDCSSEFISQIVTRVCEEFFLPGEVIMEQGHVVDQLYFVCHGVLEEIGIGNDGSEERVALLEPNSSFGEISILCNIPQPYTVRVCELCRLIRIDKQSFSNILEIYFHDGRRILTNLLEGKDSDLRVKQVESDITFHIGKQEAELALKVNSAAYHGDLHQLKGLIRAGADPNKKDYDGRSPLHLAASRGYEDISLFLIQEGVDLNASDNFDTTPLFEAIKNGHDRVASLLVKEGAFLKIENAGSFLCMLVAKGDSDLLRRLLSNGIDPNSKDYDHRTPLHVAASQGLFAMARLLLGAGASVFSKDRWGNTPFDEARLSGNNQLTKLLEEAKSAQISEFPIAPHEISEKMHPQKCTVFPFHPWEPKDLRKHGVVLWIPKSMEELITTASEQLNFPSGSCILSEDAGKILDIGLISDGQKLYLISE 825
BLAST of XM_017401279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3XFN7 ((potassium channel SKOR-like {ECO:0000313|RefSeq:XP_016438682.1}))
HSP 1 Score: 1145.95 bits (2963), Expect = 0.000e+0
Identity = 528/753 (70.12%), Postives = 650/753 (86.32%), Query Frame = 0
Match: A0A1S3XFN7 ((potassium channel SKOR-like {ECO:0000313|RefSeq:XP_016438682.1}))
HSP 1 Score: 1145.95 bits (2963), Expect = 0.000e+0
Identity = 528/753 (70.12%), Postives = 650/753 (86.32%), Query Frame = 0
Query: 1 MYSVSRWYRVWEKFIVLYAIYSSFFTPFEFGFFRGLPQNLFLLDVVGQVAFVCDMVLQFFVAYRDSVTYKMIYNRSAIALRYLKSHFIVDFLGCLPWDILYKASGSSEEVRFLLWIRLSRTRKVLAFLHKLEKDIRINYLFCRILKLLIVEIYCTHTAACIFYYLATSMPADKEGYTWIGSLQLGDHSYSNFREINLWKRYLTSLYFSIITMATVGYGDIHAVNPREMIFVMIYVSLDMVLGAYLIGNITALIVKGSKTERYRDKMSDIFKYLSRNRLGKDIRRLIKDHLRLQYECSYTDSAVLRDLPISIRAKISQNLYKPYVEKVVLFKECSAEFISQIVNRVCEEFFFPGELIMEQGDAVDHIYIVCHGVLEEVTVRDNGAEEEVALLQPSSLFGVVSILCNIPQPYTIRVRDLCRLLRLDKQIFSNILQIYVDDEQRIITNIREGR-VNLHVKQLESDITFHIGKREAELATQVNSAAYHGDLLQLKGLIRAGADPNKKDYGGRSPLHLAASRGHEDITIFLIQESVDINIIDNFGNTPLFEAIKGGHGQVASLLIKEGAVLKVDDAGTFLCTTVARGDIDFIKRALSSGVDPNSKDYDHRTPLHVAASQGFYLLAKLLLEAGASVLLKDRWGNTPLDESKMSGSKRLIELLEEAKSIQLCEFTDRSQDITANLPTKKCTVFPFHPQKPMDSDRYGVILWVPRTIGELIETAAKQLNFSPNSFIVSEDAGKLLDVNMISDGQKLYLINE 752
+Y RWY++WEKFI+++AIYSSFFTP EF FF+GLP+ LFLLD+ GQ+AF+ D+V+QFFVAYRDS TYKM++ R+ IALRYLK+HFI+DFL C+PWD +YKA+G E +R+LLWIRLSR R+V F K+EKDIRINYLF RILKL++VE+YCTHTAACIFY+LAT++P +KEGYTWIGSL LGD+SYS+FREI+LW+RY+TSLYF+I+TMATVGYGDIHAVN REMIFVMIYVS DM+LGAYLIGN+TALIVKGSKT RYRDKM+D+ Y++RNRLG+DIR IKDHLRLQYE +YTD+AVL+DLPISIRAKISQ LY+ +E + LF++CS+EFISQIV RVCEEFF PGE+IMEQG VD +Y VCHGVLEE+ + ++G+EE VALL+P+S FG +SILCNIPQPYT+RV +LCRL+R+DKQ FSNIL+IY D +RI+TN+ EG+ +L VKQ+ESDITFHIGK+EAELA +VNSAAYHGDL QLKGLIRAGADPNKKDY GRSPLHLAASRG+EDI++FLIQE VD+N DNF TPLFEAIK GH +VASLL+KEGA LK+++AG+FLC VA+GD D ++R LS+G+DPNSKDYDHRTPLHVAASQG + +A+LLL AGASV KDRWGNTP DE+++SG+ +L +LLEEAKS Q+ EF +I+ + +KCTVFPFHP +P D ++GV+LW+P+++ ELI TA++QLNF S I+SEDAGK+LD+ +ISDGQKLYLI+E
Sbjct: 73 IYPDDRWYKIWEKFILIWAIYSSFFTPMEFAFFKGLPRKLFLLDICGQIAFLVDIVVQFFVAYRDSQTYKMVHKRTPIALRYLKTHFILDFLSCMPWDNIYKAAGKKEGLRYLLWIRLSRVRRVNDFFQKMEKDIRINYLFTRILKLIVVELYCTHTAACIFYFLATTLPEEKEGYTWIGSLTLGDYSYSHFREIDLWRRYITSLYFAIVTMATVGYGDIHAVNLREMIFVMIYVSFDMILGAYLIGNMTALIVKGSKTVRYRDKMTDLMNYMNRNRLGRDIRTQIKDHLRLQYESAYTDAAVLQDLPISIRAKISQTLYQSCIENIPLFRDCSSEFISQIVTRVCEEFFLPGEVIMEQGHVVDQLYFVCHGVLEEIGIGNDGSEERVALLEPNSSFGEISILCNIPQPYTVRVCELCRLIRIDKQSFSNILEIYFHDGRRILTNLLEGKDSDLRVKQVESDITFHIGKQEAELALKVNSAAYHGDLHQLKGLIRAGADPNKKDYDGRSPLHLAASRGYEDISLFLIQEGVDLNASDNFDTTPLFEAIKNGHDRVASLLVKEGAFLKIENAGSFLCMLVAKGDSDLLRRLLSNGIDPNSKDYDHRTPLHVAASQGLFAMARLLLGAGASVFSKDRWGNTPFDEARLSGNNQLTKLLEEAKSAQISEFPIAPHEISEKMHPQKCTVFPFHPWEPKDLRKHGVVLWIPKSMEELITTASEQLNFPSGSCILSEDAGKILDIGLISDGQKLYLISE 825
BLAST of XM_017401279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: Q5NT78 ((Potassium channel TORK1 {ECO:0000313|EMBL:BAD81036.1}))
HSP 1 Score: 1144.41 bits (2959), Expect = 0.000e+0
Identity = 528/753 (70.12%), Postives = 649/753 (86.19%), Query Frame = 0
Match: Q5NT78 ((Potassium channel TORK1 {ECO:0000313|EMBL:BAD81036.1}))
HSP 1 Score: 1144.41 bits (2959), Expect = 0.000e+0
Identity = 528/753 (70.12%), Postives = 649/753 (86.19%), Query Frame = 0
Query: 1 MYSVSRWYRVWEKFIVLYAIYSSFFTPFEFGFFRGLPQNLFLLDVVGQVAFVCDMVLQFFVAYRDSVTYKMIYNRSAIALRYLKSHFIVDFLGCLPWDILYKASGSSEEVRFLLWIRLSRTRKVLAFLHKLEKDIRINYLFCRILKLLIVEIYCTHTAACIFYYLATSMPADKEGYTWIGSLQLGDHSYSNFREINLWKRYLTSLYFSIITMATVGYGDIHAVNPREMIFVMIYVSLDMVLGAYLIGNITALIVKGSKTERYRDKMSDIFKYLSRNRLGKDIRRLIKDHLRLQYECSYTDSAVLRDLPISIRAKISQNLYKPYVEKVVLFKECSAEFISQIVNRVCEEFFFPGELIMEQGDAVDHIYIVCHGVLEEVTVRDNGAEEEVALLQPSSLFGVVSILCNIPQPYTIRVRDLCRLLRLDKQIFSNILQIYVDDEQRIITNIREGR-VNLHVKQLESDITFHIGKREAELATQVNSAAYHGDLLQLKGLIRAGADPNKKDYGGRSPLHLAASRGHEDITIFLIQESVDINIIDNFGNTPLFEAIKGGHGQVASLLIKEGAVLKVDDAGTFLCTTVARGDIDFIKRALSSGVDPNSKDYDHRTPLHVAASQGFYLLAKLLLEAGASVLLKDRWGNTPLDESKMSGSKRLIELLEEAKSIQLCEFTDRSQDITANLPTKKCTVFPFHPQKPMDSDRYGVILWVPRTIGELIETAAKQLNFSPNSFIVSEDAGKLLDVNMISDGQKLYLINE 752
+Y RWY++WEKFI+++AIYSSFFTP EF FF+GLP+ LFLLD+ GQ+AF+ D+V+QFFVAYRDS TYKM++ R+ IALRYLK+HFI+DFL C+PWD +YKA+G E +R+LLWIRLSR R+V F K+EKDIRINYLF RILKL++VE+YCTHTAACIFY+LAT++P +KEGYTWIGSL LGD+SYS+FREI+LW+RY+TSLYF+I+TMATVGYGDIHAVN REMIFVMIYVS DM+LGAYLIGN+TALIVKGSKT RYRDKM+D+ Y++RNRLG+DIR IKDHLRLQYE +YTD+AVL+DLPISIRAKISQ LY+ +E + LF++CS+EFISQIV RVCEEFF PGE+IMEQG VD Y VCHGVLEE+ + ++G+EE VALL+P+S FG +SILCNIPQPYT+RV +LCRL+R+DKQ FSNIL+IY D +RI+TN+ EG+ +L VKQ+ESDITFHIGK+EAELA +VNSAAYHGDL QLKGLIRAGADPNKKDY GRSPLHLAASRG+EDI++FLIQE VD+N DNF TPLFEAIK GH +VASLL+KEGA LK+++AG+FLC VA+GD D ++R LS+G+DPNSKDYDHRTPLHVAASQG + +A+LLL AGASV KDRWGNTP DE+++SG+ +L +LLEEAKS Q+ EF +I+ + +KCTVFPFHP +P D ++GV+LW+P+++ ELI TA++QLNF S I+SEDAGK+LD+ +ISDGQKLYLI+E
Sbjct: 73 IYPDDRWYKIWEKFILIWAIYSSFFTPMEFAFFKGLPRKLFLLDICGQIAFLVDIVVQFFVAYRDSQTYKMVHKRTPIALRYLKTHFILDFLSCMPWDNIYKAAGKKEGLRYLLWIRLSRVRRVNDFFQKMEKDIRINYLFTRILKLIVVELYCTHTAACIFYFLATTLPEEKEGYTWIGSLTLGDYSYSHFREIDLWRRYITSLYFAIVTMATVGYGDIHAVNLREMIFVMIYVSFDMILGAYLIGNMTALIVKGSKTVRYRDKMTDLMNYMNRNRLGRDIRTQIKDHLRLQYESAYTDAAVLQDLPISIRAKISQTLYQSCIENIPLFRDCSSEFISQIVTRVCEEFFLPGEVIMEQGHVVDQPYFVCHGVLEEIGIGNDGSEERVALLEPNSSFGEISILCNIPQPYTVRVCELCRLIRIDKQSFSNILEIYFHDGRRILTNLLEGKDSDLRVKQVESDITFHIGKQEAELALKVNSAAYHGDLHQLKGLIRAGADPNKKDYDGRSPLHLAASRGYEDISLFLIQEGVDLNASDNFDTTPLFEAIKNGHDRVASLLVKEGAFLKIENAGSFLCMLVAKGDSDLLRRLLSNGIDPNSKDYDHRTPLHVAASQGLFAMARLLLGAGASVFSKDRWGNTPFDEARLSGNNQLAKLLEEAKSAQISEFPIAPHEISEKMHPQKCTVFPFHPWEPKDLRKHGVVLWIPKSMEELITTASEQLNFPSGSCILSEDAGKILDIGLISDGQKLYLISE 825
BLAST of XM_017401279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RDY8 ((Potassium channel SKOR like {ECO:0000313|EMBL:PSS26770.1}))
HSP 1 Score: 1142.49 bits (2954), Expect = 0.000e+0
Identity = 536/752 (71.28%), Postives = 647/752 (86.04%), Query Frame = 0
Match: A0A2R6RDY8 ((Potassium channel SKOR like {ECO:0000313|EMBL:PSS26770.1}))
HSP 1 Score: 1142.49 bits (2954), Expect = 0.000e+0
Identity = 536/752 (71.28%), Postives = 647/752 (86.04%), Query Frame = 0
Query: 5 SRWYRVWEKFIVLYAIYSSFFTPFEFGFFRGLPQNLFLLDVVGQVAFVCDMVLQFFVAYRDSVTYKMIYNRSAIALRYLKSHFIVDFLGCLPWDILYKASGSSEEVRFLLWIRLSRTRKVLAFLHKLEKDIRINYLFCRILKLLIVEIYCTHTAACIFYYLATSMPADKEGYTWIGSLQLGDHSYSNFREINLWKRYLTSLYFSIITMATVGYGDIHAVNPREMIFVMIYVSLDMVLGAYLIGNITALIVKGSKTERYRDKMSDIFKYLSRNRLGKDIRRLIKDHLRLQYECSYTDSAVLRDLPISIRAKISQNLYKPYVEKVVLFKECSAEFISQIVNRVCEEFFFPGELIMEQGDAVDHIYIVCHGVLEEVTVRDNGAEEEVALLQPSSLFGVVSILCNIPQPYTIRVRDLCRLLRLDKQIFSNILQIYVDDEQRIITNIREGRV-NLHVKQLESDITFHIGKREAELATQVNSAAYHGDLLQLKGLIRAGADPNKKDYGGRSPLHLAASRGHEDITIFLIQESVDINIIDNFGNTPLFEAIKGGHGQVASLLIKEGAVLKVDDAGTFLCTTVARGDIDFIKRALSSGVDPNSKDYDHRTPLHVAASQGFYLLAKLLLEAGASVLLKDRWGNTPLDESKMSGSKRLIELLEEAKSIQLCEFTDRSQDITANLPTKKCTVFPFHPQKPMDSDRYGVILWVPRTIGELIETAAKQLNFSPN---SFIVSEDAGKLLDVNMISDGQKLYLINE 752
+RWYR W K I+++A+YSSFFTP EFGFFRGLP+ LFLLD+ GQVAF+ D++LQFFVAYRDS TYK++Y R+ IALRYLKS F+VD L C+PWD++Y+ G+ EE+R+LLWIRL R RKV F K+EKDIRINY+F RI+KL++VE+YCTHTAACIFYYLAT++PA++EGYTWIGSL++GD+SYS+FR+I+LW RY TSLYF+I+TMATVGYG+IHAVN REMIF+MIYVS DM+LGAYLIGN+TALIVKGSKTER+RDKM+D+ KY++RNRLG+DIR IK H+RLQYE SYT+++VL+DLPISIRAKISQ LYK Y+E V LFK CS+EFI+QIV RV EEFF PGE+IMEQG+ VD +Y VCHG LEEV +R +G+EE V+ L+P+S FG +SILCNIPQPYT+RV DLCRLLR+DKQ FSNIL+IY D + I+ N+ EG+V N+ VKQLESDITFHIGK+EAELA +VNSAAYHGDL QLKGLIRAGADPNK DY GRSPLHLAASRG+EDIT FLIQE VDINI D FGNTPL EA+K GH ++AS+L+KEGA LK+D AG+FLCT VARGD DF+KR LS+G+DPNSK+YDHRTPLHVAAS+G YL+ KLLL AGASV KDRWGNTPLDE++M G+ LI+LLEEAKS QL EF D SQ+IT +L +KCTVFPFHP P D ++G++LWVP+TI ELI+ AAK+L+F S I+SEDAGK+LDV+MISDGQKLYLI++
Sbjct: 80 NRWYRAWTKIILVWAVYSSFFTPMEFGFFRGLPRKLFLLDIAGQVAFLVDILLQFFVAYRDSQTYKIVYKRTPIALRYLKSSFVVDLLACMPWDVIYRVCGNREELRYLLWIRLIRVRKVTDFFQKMEKDIRINYMFSRIVKLIVVELYCTHTAACIFYYLATTLPAEQEGYTWIGSLKMGDYSYSHFRQIDLWTRYTTSLYFAIVTMATVGYGEIHAVNLREMIFIMIYVSFDMILGAYLIGNMTALIVKGSKTERFRDKMTDLMKYMNRNRLGRDIRNQIKGHVRLQYESSYTEASVLQDLPISIRAKISQTLYKSYIENVPLFKGCSSEFINQIVIRVHEEFFLPGEVIMEQGNVVDQLYFVCHGTLEEVGIRADGSEESVSNLEPNSSFGEISILCNIPQPYTVRVCDLCRLLRVDKQSFSNILEIYFHDGRIILNNLLEGKVSNVRVKQLESDITFHIGKQEAELALRVNSAAYHGDLRQLKGLIRAGADPNKTDYDGRSPLHLAASRGYEDITHFLIQEDVDINISDKFGNTPLLEALKNGHDRIASILVKEGAELKIDAAGSFLCTAVARGDSDFLKRILSNGIDPNSKNYDHRTPLHVAASEGLYLMTKLLLGAGASVFSKDRWGNTPLDEARMCGNNNLIKLLEEAKSTQLSEFADCSQEITVHL--RKCTVFPFHPWDPKDKSKHGIVLWVPQTIEELIKAAAKELDFPSGSCFSCILSEDAGKILDVDMISDGQKLYLISQ 829
BLAST of XM_017401279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A830C2K5 ((Potassium channel skor {ECO:0000313|EMBL:GFP94887.1}))
HSP 1 Score: 1142.1 bits (2953), Expect = 0.000e+0
Identity = 530/749 (70.76%), Postives = 644/749 (85.98%), Query Frame = 0
Match: A0A830C2K5 ((Potassium channel skor {ECO:0000313|EMBL:GFP94887.1}))
HSP 1 Score: 1142.1 bits (2953), Expect = 0.000e+0
Identity = 530/749 (70.76%), Postives = 644/749 (85.98%), Query Frame = 0
Query: 5 SRWYRVWEKFIVLYAIYSSFFTPFEFGFFRGLPQNLFLLDVVGQVAFVCDMVLQFFVAYRDSVTYKMIYNRSAIALRYLKSHFIVDFLGCLPWDILYKASGSSEEVRFLLWIRLSRTRKVLAFLHKLEKDIRINYLFCRILKLLIVEIYCTHTAACIFYYLATSMPADKEGYTWIGSLQLGDHSYSNFREINLWKRYLTSLYFSIITMATVGYGDIHAVNPREMIFVMIYVSLDMVLGAYLIGNITALIVKGSKTERYRDKMSDIFKYLSRNRLGKDIRRLIKDHLRLQYECSYTDSAVLRDLPISIRAKISQNLYKPYVEKVVLFKECSAEFISQIVNRVCEEFFFPGELIMEQGDAVDHIYIVCHGVLEEVTVRDNGAEEEVALLQPSSLFGVVSILCNIPQPYTIRVRDLCRLLRLDKQIFSNILQIYVDDEQRIITNIREGR-VNLHVKQLESDITFHIGKREAELATQVNSAAYHGDLLQLKGLIRAGADPNKKDYGGRSPLHLAASRGHEDITIFLIQESVDINIIDNFGNTPLFEAIKGGHGQVASLLIKEGAVLKVDDAGTFLCTTVARGDIDFIKRALSSGVDPNSKDYDHRTPLHVAASQGFYLLAKLLLEAGASVLLKDRWGNTPLDESKMSGSKRLIELLEEAKSIQLCEFTDRSQDITANLPTKKCTVFPFHPQKPMDSDRYGVILWVPRTIGELIETAAKQLNFSPNSFIVSEDAGKLLDVNMISDGQKLYLINE 752
+RWY+ WEKFI+++AIYSSFFTP EFGFFRGLP+NLF+LD+VGQVAF+ D+VLQFFVAYRDS +Y M+ NR+ I+LRYLK+HFI D L C+PWD++YKA G EEVR+LL+IRL+R RKV++F +LEKDIRINYLF RILKL+ VE+YCTHTAACIFYYLAT++P +KEGYTWIGSL+LGD+SY++FREI++WKRY TSLYF+I+TMATVGYGDIHAVN REMIF+M+YVS DM+LGAYLIGN+TALIVKGSKTERYRDKM+D+ KY++RN LG+D+R IK HLRLQYE SYTD++VL+D+PISIRAKISQ LY+ YV+ + LFK+CS EFI+QIV RV EEFF PGE+IM QG+ VD +Y VCHGVLEEV + +G+EE V+LL+P+SLFG +SILCNIPQPYT+RV DLCRLLR+DKQ FSNIL+IY D ++++TN+ EG+ NL +KQLESDITFHIGK+EAELA +VNSAAY+GDL QLK LIR+GADPNKKDY GRS LHLAASRG+EDIT+FLIQE VDIN DNFGNTPL EAIK GH +VASLL KEGA+LK+D+AG++LCT VARGD D ++R L +G+D NS+DYD RTPLH+AASQG YL+AKLLLEAGASV LKDRWGNTP+DE +M G+K +I LLEEAK QL EF D S D+T TKKCTVFPFHP P + ++G+++WVP TI ELIE A+KQL I+SED GK+L+V+MI+DGQKLY++NE
Sbjct: 72 NRWYKAWEKFILIWAIYSSFFTPMEFGFFRGLPKNLFVLDIVGQVAFLIDIVLQFFVAYRDSHSYNMVCNRNLISLRYLKTHFIPDLLSCMPWDVIYKAVGRKEEVRYLLFIRLTRVRKVISFFQRLEKDIRINYLFTRILKLIAVELYCTHTAACIFYYLATTLPEEKEGYTWIGSLKLGDYSYAHFREIDIWKRYTTSLYFAIVTMATVGYGDIHAVNLREMIFIMVYVSFDMILGAYLIGNMTALIVKGSKTERYRDKMTDLIKYMNRNGLGRDLRNQIKGHLRLQYESSYTDTSVLQDIPISIRAKISQTLYESYVKNIPLFKDCSLEFINQIVTRVHEEFFLPGEVIMAQGNVVDQLYFVCHGVLEEVGIGADGSEETVSLLEPNSLFGEISILCNIPQPYTVRVCDLCRLLRIDKQSFSNILEIYFHDGRKVLTNLLEGKESNLRLKQLESDITFHIGKQEAELALRVNSAAYYGDLYQLKSLIRSGADPNKKDYDGRSALHLAASRGYEDITLFLIQEGVDINGEDNFGNTPLLEAIKSGHDKVASLLSKEGALLKIDNAGSYLCTIVARGDSDLLRRVLQNGIDSNSRDYDRRTPLHIAASQGLYLMAKLLLEAGASVFLKDRWGNTPMDEGRMCGNKNMIRLLEEAKMAQLSEFPDSSLDVTDKSHTKKCTVFPFHPWHPKEGKKHGIVMWVPHTIKELIEQASKQLELPDGLCILSEDGGKILEVDMITDGQKLYVLNE 820
BLAST of XM_017401279.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G3AZU6 ((Potassium channel SKOR {ECO:0000313|EMBL:PHT99746.1}))
HSP 1 Score: 1141.72 bits (2952), Expect = 0.000e+0
Identity = 530/749 (70.76%), Postives = 643/749 (85.85%), Query Frame = 0
Match: A0A2G3AZU6 ((Potassium channel SKOR {ECO:0000313|EMBL:PHT99746.1}))
HSP 1 Score: 1141.72 bits (2952), Expect = 0.000e+0
Identity = 530/749 (70.76%), Postives = 643/749 (85.85%), Query Frame = 0
Query: 5 SRWYRVWEKFIVLYAIYSSFFTPFEFGFFRGLPQNLFLLDVVGQVAFVCDMVLQFFVAYRDSVTYKMIYNRSAIALRYLKSHFIVDFLGCLPWDILYKASGSSEEVRFLLWIRLSRTRKVLAFLHKLEKDIRINYLFCRILKLLIVEIYCTHTAACIFYYLATSMPADKEGYTWIGSLQLGDHSYSNFREINLWKRYLTSLYFSIITMATVGYGDIHAVNPREMIFVMIYVSLDMVLGAYLIGNITALIVKGSKTERYRDKMSDIFKYLSRNRLGKDIRRLIKDHLRLQYECSYTDSAVLRDLPISIRAKISQNLYKPYVEKVVLFKECSAEFISQIVNRVCEEFFFPGELIMEQGDAVDHIYIVCHGVLEEVTVRDNGAEEEVALLQPSSLFGVVSILCNIPQPYTIRVRDLCRLLRLDKQIFSNILQIYVDDEQRIITNIREGR-VNLHVKQLESDITFHIGKREAELATQVNSAAYHGDLLQLKGLIRAGADPNKKDYGGRSPLHLAASRGHEDITIFLIQESVDINIIDNFGNTPLFEAIKGGHGQVASLLIKEGAVLKVDDAGTFLCTTVARGDIDFIKRALSSGVDPNSKDYDHRTPLHVAASQGFYLLAKLLLEAGASVLLKDRWGNTPLDESKMSGSKRLIELLEEAKSIQLCEFTDRSQDITANLPTKKCTVFPFHPQKPMDSDRYGVILWVPRTIGELIETAAKQLNFSPNSFIVSEDAGKLLDVNMISDGQKLYLINE 752
SRWYR+WE FI++++IYSSFFTP EF FF GLP+ LFLLD+ GQ+ F+ D+V+QFFVAYRDS TYKM+Y R+ IALRYLKSHFI+DFLGCLPWDI+YKA GS EEVR+LLWIRLSR R++ F K+EKDIRINYLF RI+KL+ VE+YCTHTAACIFYYLAT++ +EGYTWIGSL+LGD+SYSNFR+I+LW RY+TS+YF+I+TMATVGYGDIHAVN REMIFVMIYVS DM+LGAYLIGN+TALIVKGSKTERYRDKM+D+ KY++RN+LG+DIR IK HLRLQYE +YTD+AVL+D+PISIRAKISQNLY+ Y+E V LFK CS+EFISQ+V RV EEFF PGE+IMEQG+ VD +Y VCHGVLEEV + +G+EE V+LL+P+S FG +SI+CNIPQPYT+RV +LCRL+R+DKQ FSNIL+IY D +RI++N+ +G+ NL VKQLESDI HIGK EAELA +VNSAAYHGDL QLK LIRAGADPNKKDY GRSPLHLAASRG+EDIT FLIQE VDIN D FGNTPL EAIK GH +VASLL+KEGA+L ++++G+FLCT +A+GD D ++R LS+GVDPN+KDYD RTPLHVAA+QG Y +AKLLL AGASV KDRWGNTP+DE+++SG+K++I LLEEAKS QL EF D +I+ L +KCTVFPFHP + D ++GV+LW+P+TI EL+ TA++QL+F I+SEDAGK+LDV+MI DGQKLYLI+E
Sbjct: 71 SRWYRMWENFILIWSIYSSFFTPMEFAFFNGLPRKLFLLDICGQIVFLVDIVIQFFVAYRDSQTYKMVYKRTPIALRYLKSHFIMDFLGCLPWDIIYKAVGSKEEVRYLLWIRLSRARRITYFFQKMEKDIRINYLFTRIVKLITVELYCTHTAACIFYYLATTLSEQQEGYTWIGSLKLGDYSYSNFRDIDLWTRYITSMYFAIVTMATVGYGDIHAVNLREMIFVMIYVSFDMILGAYLIGNMTALIVKGSKTERYRDKMTDLLKYMNRNKLGRDIRNQIKGHLRLQYESAYTDAAVLQDIPISIRAKISQNLYQSYIENVPLFKGCSSEFISQVVTRVHEEFFLPGEVIMEQGNVVDQLYFVCHGVLEEVGIAKDGSEETVSLLEPNSSFGDISIVCNIPQPYTVRVCELCRLIRIDKQSFSNILEIYFHDGRRILSNLLQGKESNLRVKQLESDIALHIGKHEAELALKVNSAAYHGDLHQLKSLIRAGADPNKKDYDGRSPLHLAASRGYEDITSFLIQEGVDINAPDKFGNTPLLEAIKSGHDRVASLLVKEGALLNIENSGSFLCTVIAKGDSDLLRRLLSNGVDPNTKDYDQRTPLHVAATQGQYSMAKLLLGAGASVFSKDRWGNTPVDEARVSGNKQMISLLEEAKSAQLSEFPDVPHEISDKLRPRKCTVFPFHPWESKDLRKHGVVLWIPQTIEELVTTASEQLDFPSGCCILSEDAGKILDVDMIVDGQKLYLIDE 819
| Match Name | Stats | Description |
|---|---|---|
| A0A2G9GNW1 | E-Value: 0.000e+0, PID: 71.20 | (K+-channel ERG {ECO:0000313|EMBL:PIN06938.1})[more] |
| A0A1S3Z7A8 | E-Value: 0.000e+0, PID: 70.80 | (potassium channel SKOR-like {ECO:0000313|RefSeq:X... [more] |
| A0A1U7YFZ4 | E-Value: 0.000e+0, PID: 70.80 | (potassium channel SKOR-like {ECO:0000313|RefSeq:X... [more] |
| A0A314KXX1 | E-Value: 0.000e+0, PID: 70.80 | (Potassium channel skor {ECO:0000313|EMBL:OIT34005... [more] |
| A0A1U7V8F0 | E-Value: 0.000e+0, PID: 70.12 | (potassium channel SKOR-like {ECO:0000313|RefSeq:X... [more] |
| A0A1S3XFN7 | E-Value: 0.000e+0, PID: 70.12 | (potassium channel SKOR-like {ECO:0000313|RefSeq:X... [more] |
| Q5NT78 | E-Value: 0.000e+0, PID: 70.12 | (Potassium channel TORK1 {ECO:0000313|EMBL:BAD8103... [more] |
| A0A2R6RDY8 | E-Value: 0.000e+0, PID: 71.28 | (Potassium channel SKOR like {ECO:0000313|EMBL:PSS... [more] |
| A0A830C2K5 | E-Value: 0.000e+0, PID: 70.76 | (Potassium channel skor {ECO:0000313|EMBL:GFP94887... [more] |
| A0A2G3AZU6 | E-Value: 0.000e+0, PID: 70.76 | (Potassium channel SKOR {ECO:0000313|EMBL:PHT99746... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |