Resource Type:
Polypeptide
Name:
XM_017374585.1
Identifier:
XM_017374585.1-protein
Sequence:
MAANVGNSKTGEISMLETKRSGDVVVMVSGQEKDVKNSPRQEKDVKNSPR
RLSSDSHFEGVKFVPMGTPSPENARFAPSPNRPPKIPTKESTAPRKALAR
SVYSKPKSRFGEQPISVESYMLEEDSNFMQDCLKSSGNSPARNMSTQASP
NSRAASAHNSFKDMNRNVSINTPRTPLMASPGGVIVDEDEEIYKKVSNRN
KLKYKKVKIKVLIDWIVFLVILGSLISCLTIDKLEHTRIWGLELWKWSLL
VMVTFSGMLFTTWFMHFVVLVIEMNYLFRKKVLYFVHGLKKSAQVCLWWT
LILITWLSLFNNGVHRSATATKVLDYITWTIVSVLICSFLWLFKTLLLKV
LASSFHVTTFFDRVQESIFHQYVLQVLSGPPLMAGRADSGSQFSFRSKKI
GKKGKEDTKKAVIDINKLHQIKQEKVSAWTMKILVDVISNSGLSTISSSL
DETDYYGNNEQTDKEITSEMEAIAAAYHIYSNVAQPGSMYIYELDLRRFM
LKEEVDLVFPLIDVAEMGQIDKKALTEWVVKVYNGRKALAHALNDTKTAV
KQLNTLVTVILIVIVFVVWLLLVEIATTKVLLFLSSQLVAAAFLFGNTCK
TIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDMEKIYY
PNSVLATKPISNFYRSPDMGDSLEFSICFTTPVEKIGSLREKIKKYLERT
PQYWHPNHNLVVKEIENVNKIKMALFFNHTMNFQEFGEKNRRRSELVIEM
KKIFEELGIKYNLLPQEVQVVNSDAAR
Sequence Length:
777
Sequence Checksum:
fd010c3d8e46238b67b35eacbc5970a2
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017374585.1, derives from mRNA, XM_017374585.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017374585.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017374585.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6YYR3 ((Putative mechanosensitive ion channel protein 10-like {ECO:0000313|EMBL:MPA37037.1}) (Fragment))
HSP 1 Score: 1028.47 bits (2658), Expect = 0.000e+0
Identity = 528/782 (67.52%), Postives = 627/782 (80.18%), Query Frame = 0
Match: A0A5B6YYR3 ((Putative mechanosensitive ion channel protein 10-like {ECO:0000313|EMBL:MPA37037.1}) (Fragment))
HSP 1 Score: 1028.47 bits (2658), Expect = 0.000e+0
Identity = 528/782 (67.52%), Postives = 627/782 (80.18%), Query Frame = 0
Query: 1 MAANVGNSKTGEISMLETKRSGDVVVMVSGQEKDVKNSPRQEKDVKNSPRRLSSDSHFEGVKFVPMGTPSPENARFAPSPNRPPKIPTKESTAPRKALARSVYSKPKSRFGEQPISVESYMLEE--DSNFMQDCLKSSGNSPARNMSTQASPNSRAASAHNSFKDMNRNVSINTPRTPLMASPGGVI-VDEDEEIYKKVSNRNKLKYKKVKIKVLIDWIVFLVILGSLISCLTIDKLEHTRIWGLELWKWSLLVMVTFSGMLFTTWFMHFVVLVIEMNYLFRKKVLYFVHGLKKSAQVCLWWTLILITWLSLFNNGVHRSATATKVLDYITWTIVSVLICSFLWLFKTLLLKVLASSFHVTTFFDRVQESIFHQYVLQVLSGPPLMA-----GRADSGSQFSFRSKKIGKKGKEDTKKAVIDINKLHQIKQEKVSAWTMKILVDVISNSGLSTISSSLDETDYYGNNEQTDKEITSEMEAIAAAYHIYSNVAQPGSMYIYELDLRRFMLKEEVDLVFPLIDVAEMGQIDKKALTEWVVKVYNGRKALAHALNDTKTAVKQLNTLVTVILIVIVFVVWLLLVEIATTKVLLFLSSQLVAAAFLFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDMEKIYYPNSVLATKPISNFYRSPDMGDSLEFSICFTTPVEKIGSLREKIKKYLERTPQYWHPNHNLVVKEIENVNKIKMALFFNHTMNFQEFGEKNRRRSELVIEMKKIFEELGIKYNLLPQEVQVVNSD 774
M A S GEISM + +++ +VVV++ G E + PR D +SP+++ PM PSPE ARF PSPN+PPKIPT E+ RK+LARSVYSKPKSRFGEQ + ++S M EE S+ + + S NSP RN+S ASP + ++ + K+ + TP+TPLMASPG DE+EEIYKKVS +NKLKY++VK+KVLI+W+ F+ +G LI+ LT+DKL+ +IW LE+WKW +L+MVTF GML T WFMHF V +IE+N+LF+KKVLYFVHGLKKS QVC+W L+L+TW+ LF V RS TA ++LDY+TWTI S+LI +FLWLFK LLLK+LASSFHV TFFDR+QESIFHQY+LQ LSGPPLM GR S SQ SFR K KGKE +K VIDINKLH++KQEKVSAWTMK+LVDVIS SGLSTIS++LDET G EQ DKEIT+EMEAIAAAYHI+ NV Q GS +I E+DLRRFM+KEEVD+VFPLI AE QID+KALT+WVVKVY GRKALAHALNDTKTAVKQLN LVT ILI+++ +VWLLL+EIATTKVL+FLSSQLV AAF+FGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQM+VEEMNILTTVFLR+D EKIYYPNSVLATKPISNFYRSPDMGDSLEFSI F TPVEKIG+L++KI+KYL + PQ+WHPNHN+VVKEIENVNKIKMA+FFNHTMNFQ++GEKN+RRSELVIEMKKIFEELGIKY LLPQEV ++ ++
Sbjct: 3 MDAYQKASNGGEISMTDNRKTSEVVVVIPGGED---SKPRNSVD-SHSPQKVPP---------APMSCPSPEIARFKPSPNKPPKIPTTETLTRRKSLARSVYSKPKSRFGEQSVPIDSNMFEEISSSSIQEQVVGQSSNSPLRNISNGASPPNNKMASTTTLKEAFKTTVPITPKTPLMASPGFFRGEDEEEEIYKKVSIKNKLKYRRVKMKVLIEWVAFICFMGCLITALTVDKLKRHKIWDLEIWKWFVLIMVTFCGMLVTNWFMHFFVFLIELNFLFKKKVLYFVHGLKKSVQVCIWLCLVLLTWILLFRE-VERSGTAKRILDYVTWTIASLLIGAFLWLFKNLLLKILASSFHVNTFFDRIQESIFHQYILQTLSGPPLMESAEMLGRTSSISQLSFRRTK---KGKEGKEKEVIDINKLHKMKQEKVSAWTMKMLVDVISTSGLSTISNALDETVDDGEGEQADKEITNEMEAIAAAYHIFRNVTQLGSKHIDEMDLRRFMIKEEVDIVFPLIAGAETLQIDRKALTDWVVKVYKGRKALAHALNDTKTAVKQLNKLVTGILIIVIIIVWLLLMEIATTKVLVFLSSQLVVAAFMFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMVVEEMNILTTVFLRFDNEKIYYPNSVLATKPISNFYRSPDMGDSLEFSIDFMTPVEKIGALKDKIQKYLLKNPQHWHPNHNVVVKEIENVNKIKMAVFFNHTMNFQDYGEKNKRRSELVIEMKKIFEELGIKYYLLPQEVHLIGTN 767
BLAST of XM_017374585.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6TVC8 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 1024.23 bits (2647), Expect = 0.000e+0
Identity = 533/785 (67.90%), Postives = 638/785 (81.27%), Query Frame = 0
Match: A0A6P6TVC8 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 1024.23 bits (2647), Expect = 0.000e+0
Identity = 533/785 (67.90%), Postives = 638/785 (81.27%), Query Frame = 0
Query: 1 MAANVGNSK-TGEISMLETKR-SGDVVVMVSGQEKDVKNSPRQEKDVKNSPRRLSSDSHFEGVKFVPMGTPSPENARFAPSPNRPPKIPTKESTAPRKALARSVYSKPKSRFGEQPISVESYMLEEDSNFMQDCLKSSGNSPARNMSTQASPNSRAASAH-NSFKDMNRNVSINTPRTPLMASPGGVI-VDEDEEIYKKVSNRNKLKYKKVKIKVLIDWIVFLVILGSLISCLTIDKLEHTRIWGLELWKWSLLVMVTFSGMLFTTWFMHFVVLVIEMNYLFRKKVLYFVHGLKKSAQVCLWWTLILITWLSLFNNGVHRSATATKVLDYITWTIVSVLICSFLWLFKTLLLKVLASSFHVTTFFDRVQESIFHQYVLQVLSGPPLMA-----GRADSG-SQFSFRSKKIGKKGKEDTKKAVIDINKLHQIKQEKVSAWTMKILVDVISNSGLSTISSSLDETDYYGNNEQTDKEITSEMEAIAAAYHIYSNVAQPGSMYIYELDLRRFMLKEEVDLVFPLIDVAEMGQIDKKALTEWVVKVYNGRKALAHALNDTKTAVKQLNTLVTVILIVIVFVVWLLLVEIATTKVLLFLSSQLVAAAFLFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDMEKIYYPNSVLATKPISNFYRSPDMGDSLEFSICFTTPVEKIGSLREKIKKYLERTPQYWHPNHNLVVKEIENVNKIKMALFFNHTMNFQEFGEKNRRRSELVIEMKKIFEELGIKYNLLPQEVQVVNSDA 775
M AN SK +GEISM E K+ SG+VVV++SG EKD KN P SP R S DS + VP+ SPE A ++PS N+PPKIPT ++ RK++ARSVYSKPKSRFGEQ + V++ M +ED + +Q+ + S +SP RN+S Q SPN + S++ N+ K+ RNV I TP+TPLMASPGG DEDEEIYKKVS RNKL+Y +VK+KVLI+W VF ILG ++ LT+ KL IWGLE+WKW LVMVT SGMLFT W + F VL+IE+ +L RKKVLYFV+ L+KS Q C+W +L+L+TW+ LF GV RS ATK+LDYITWT+V+ LI +FLWL K LLLK+LASSFHV FFDR+QES+FHQY+L LSGPP+M GR +S SQFSFR K GK GKE +KAVIDINKLHQ+K+EKV+AWTMK+LVDVISN+GL+T+S +L E+ Y G NEQ+DKEIT+E EAIAAAYH++ NVAQPG YI E+DLRRFM+KEEVD+V P+IDVAE GQID+KALT WVVKVYNGRKALAHALNDTKTAVKQL LVT ILI+I+ ++WLLL+EIATTKVL+FLSSQLV AF+FGNTCKTIFEAIIFVFVMHPFDVGDRCV+DGVQM+VEEMNILTTVFLRYD EKIYYPNSVLA+KPISNFYRSPDMGDSLEFSI F TP+E IG+L++KIKKYLE+ P YWHPNH++VVKEIENVNKIKMA+FFNHTMNFQ++GEKNRRRSELV+E+K+IFEEL IKY+LLPQEV++V S +
Sbjct: 1 MDANTKASKQSGEISMAENKKTSGEVVVLISGDEKDPKNPPPAA-----SPVRASVDSPSGAQRAVPVSFSSPEAAGYSPSANKPPKIPTTDTLTRRKSIARSVYSKPKSRFGEQSVPVDTNMFDEDISIIQEHAEPSCSSPYRNLSNQPSPNDKMGSSNANTLKETIRNVPI-TPKTPLMASPGGFGGADEDEEIYKKVSLRNKLRYHRVKVKVLIEWFVFACILGCFVASLTVHKLRQWTIWGLEIWKWCALVMVTVSGMLFTKWLVLFAVLLIELAFLLRKKVLYFVYALRKSVQFCMWLSLVLLTWVLLFRRGVERSRLATKILDYITWTMVTFLIGAFLWLLKNLLLKILASSFHVNAFFDRIQESVFHQYILLTLSGPPVMESAQMFGRKNSTVSQFSFRRTKAGKDGKEKKEKAVIDINKLHQMKREKVTAWTMKMLVDVISNTGLTTLSGTLGESVYDGGNEQSDKEITNEEEAIAAAYHVFRNVAQPGCRYIDEMDLRRFMIKEEVDIVLPMIDVAETGQIDRKALTHWVVKVYNGRKALAHALNDTKTAVKQLGKLVTAILIIIIIIIWLLLMEIATTKVLVFLSSQLVLVAFMFGNTCKTIFEAIIFVFVMHPFDVGDRCVVDGVQMVVEEMNILTTVFLRYDNEKIYYPNSVLASKPISNFYRSPDMGDSLEFSIDFKTPLELIGTLKDKIKKYLEKNPSYWHPNHSVVVKEIENVNKIKMAIFFNHTMNFQDYGEKNRRRSELVLEIKRIFEELKIKYDLLPQEVRLVESKS 779
BLAST of XM_017374585.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6QYZ0 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 1023.08 bits (2644), Expect = 0.000e+0
Identity = 508/785 (64.71%), Postives = 619/785 (78.85%), Query Frame = 0
Match: A0A2R6QYZ0 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 1023.08 bits (2644), Expect = 0.000e+0
Identity = 508/785 (64.71%), Postives = 619/785 (78.85%), Query Frame = 0
Query: 1 MAANVGNSKTGEISMLETKRS------GDVVVMVSGQEKDVKNSPRQEKDVKNSPRRLSSDSHFEGVKFVPMGTPSPENARFAPSPNRPPKIPTKESTAPRKALARSVYSKPKSRFGEQPISVESYMLEEDSNFMQDCLKSSGNSPARNMSTQASPNSRAASAHNSFKDMNRNVSINTPRTPLMASPGGVIV-DEDEEIYKKVSNRNKLKYKKVKIKVLIDWIVFLVILGSLISCLTIDKLEHTRIWGLELWKWSLLVMVTFSGMLFTTWFMHFVVLVIEMNYLFRKKVLYFVHGLKKSAQVCLWWTLILITWLSLFNNGVHRSATATKVLDYITWTIVSVLICSFLWLFKTLLLKVLASSFHVTTFFDRVQESIFHQYVLQVLSGPPLM-----AGRADSGSQFSFRSKKIGKKGKEDTKKAVIDINKLHQIKQEKVSAWTMKILVDVISNSGLSTISSSLDETDYYGNNEQTDKEITSEMEAIAAAYHIYSNVAQPGSMYIYELDLRRFMLKEEVDLVFPLIDVAEMGQIDKKALTEWVVKVYNGRKALAHALNDTKTAVKQLNTLVTVILIVIVFVVWLLLVEIATTKVLLFLSSQLVAAAFLFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDMEKIYYPNSVLATKPISNFYRSPDMGDSLEFSICFTTPVEKIGSLREKIKKYLERTPQYWHPNHNLVVKEIENVNKIKMALFFNHTMNFQEFGEKNRRRSELVIEMKKIFEELGIKYNLLPQEVQVVNS 773
M +N SK+GEISM E K++ +VVV++S ++ +V+NS +S ++ +D PM PSPE ARF+PSPNRPP+IPT E+ A RK+L RSV SKPKSRFGEQ + ++S +LEE S+ MQ+ + SP S +ASP + A ++ K+ R VS+ TPR PLMASPGGV DEDE IYKKVS++ KLKYK+VK+KVLI+WIVFL +LG+L++ LT+ KL++ R+WGLE WKW +LV+VTFSGM T W +HF+V +IE N+LFR+KVLYFVHGLKKS QVC+W L+L+TW+ L +GV +SA ++LD +TWTIVS LI +FLW+ KTL+LKVLAS FHV TFFDR+QES+FHQY+LQ LSGP +M RA+S S SFR K GK GK+ K V+D+NKL+Q+KQEKVSAWTMK+LVD IS SG STIS++LDE+ Y+G EQTDKEIT+EMEAIAAAYHI+ NVA YIYE D RFM+KEEVDLVFPL + +E G+ID+KALT+WVV VY GRKALAHAL DTKTAVKQL+ LV IL+V++ +VWLLL IATT+VL+FLSSQL+ AAF+FGNTCK IFEA+IFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLR+D EKIYYPN+VLATKPISNFYRSPDMGDS EFSI F TPV+KIG L++KIK YLE PQ+WHPNHN+VVKEIENVNKIKMALFFNHTMNFQ + EK++R+SELVIE+KK FEELGIKY+LLPQEV +V S
Sbjct: 1 MDSNGKASKSGEISMTENKKASPVDAGAEVVVVISSEDSNVRNSV-------DSSQKTWAD-------LAPMSYPSPEIARFSPSPNRPPRIPTTEALARRKSLTRSVLSKPKSRFGEQSVPIDSNLLEEISSAMQERTEQCVISP----SNRASPINSTAHTASTLKETMRTVSV-TPRMPLMASPGGVKEEDEDELIYKKVSSQRKLKYKRVKMKVLIEWIVFLCMLGNLVASLTVHKLQNYRVWGLEFWKWCVLVLVTFSGMSVTKWSIHFLVFLIERNFLFRRKVLYFVHGLKKSVQVCIWLGLVLLTWVLLIESGVDQSAKTMRMLDCVTWTIVSFLIGAFLWVLKTLMLKVLASHFHVNTFFDRIQESVFHQYILQTLSGPAIMELGQMVQRANSTSHLSFRIKLKGKDGKQ---KEVVDMNKLYQMKQEKVSAWTMKVLVDAISTSGFSTISNALDESFYHGGGEQTDKEITNEMEAIAAAYHIFKNVAHTDYTYIYEEDFGRFMIKEEVDLVFPLFEGSETGRIDRKALTDWVVNVYKGRKALAHALTDTKTAVKQLDKLVMGILVVVMIIVWLLLTRIATTEVLVFLSSQLLVAAFMFGNTCKIIFEALIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRFDNEKIYYPNTVLATKPISNFYRSPDMGDSTEFSIDFRTPVKKIGDLKDKIKMYLENNPQHWHPNHNVVVKEIENVNKIKMALFFNHTMNFQNYAEKSKRKSELVIEIKKFFEELGIKYDLLPQEVHLVES 763
BLAST of XM_017374585.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6U269 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 1014.6 bits (2622), Expect = 0.000e+0
Identity = 534/785 (68.03%), Postives = 635/785 (80.89%), Query Frame = 0
Match: A0A6P6U269 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 1014.6 bits (2622), Expect = 0.000e+0
Identity = 534/785 (68.03%), Postives = 635/785 (80.89%), Query Frame = 0
Query: 1 MAANVGNSK-TGEISMLETKR-SGDVVVMVSGQEKDVKNSPRQEKDVKNSPRRLSSDSHFEGVKFVPMGTPSPENARFAPSPNRPPKIPTKESTAPRKALARSVYSKPKSRFGEQPISVESYMLEEDSNFMQDCLKSSGNSPARNMSTQASPNSRAASAH-NSFKDMNRNVSINTPRTPLMASPGGVI-VDEDEEIYKKVSNRNKLKYKKVKIKVLIDWIVFLVILGSLISCLTIDKLEHTRIWGLELWKWSLLVMVTFSGMLFTTWFMHFVVLVIEMNYLFRKKVLYFVHGLKKSAQVCLWWTLILITWLSLFNNGVHRSATATKVLDYITWTIVSVLICSFLWLFKTLLLKVLASSFHVTTFFDRVQESIFHQYVLQVLSGPPLMA-----GRADSG-SQFSFRSKKIGKKGKEDTKKAVIDINKLHQIKQEKVSAWTMKILVDVISNSGLSTISSSLDETDYYGNNEQTDKEITSEMEAIAAAYHIYSNVAQPGSMYIYELDLRRFMLKEEVDLVFPLIDVAEMGQIDKKALTEWVVKVYNGRKALAHALNDTKTAVKQLNTLVTVILIVIVFVVWLLLVEIATTKVLLFLSSQLVAAAFLFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDMEKIYYPNSVLATKPISNFYRSPDMGDSLEFSICFTTPVEKIGSLREKIKKYLERTPQYWHPNHNLVVKEIENVNKIKMALFFNHTMNFQEFGEKNRRRSELVIEMKKIFEELGIKYNLLPQEVQVVNSDA 775
M AN SK +GEISM E K+ SG+VVV +SG EKD K P V R S DS + VP+ SPE A ++PS N+PPKIPT ++ RK++ARSVYSKPKSRFGEQ + V++ M +ED + +Q+ + S +SP RN+S Q SPN + S++ N+ K+ RNV I TP+TPLMASPGG DEDEEIYKKVS RNKL+Y +VK+KVLI+W VF ILG ++ LT+ KL IWGLE+WKW LVMVT SGMLFT W + F VL+IE+ +L RKKVLYFV+ L+KS Q C+W +L+L+TW+ LF GV RS ATK+LDYITWT+V+ LI +FLWL KTLLLK+LASSFHV FFDR+QES+FHQY+L LSGPP+M GRA+S SQFSFR K GK GKE +KAVIDINKLHQ+K+EKV+AWTMK+LVDVISN+GL+T S +L E+ Y G NEQ+DKEIT+E EAIAAAYHI+ NVAQPG YI E+DLRRFM+KEEVD+V P+IDVAE GQID+KALT WVVKVYNGRKALAHALNDTKTAVKQL L T ILI+I+ ++WLLL+EIATTKVL+FLSSQLV AAF+FGNTCKTIFEAIIFVFVMHPFDVGDRCV+DGVQM+VEEMNILTTVFLRYD EKIYYPNSVLA+KPISNFYRSPDMGDSLEFSI F TP+E IG+L++KIKKYLE+ P YWHPNH++VVKEIENVNKIKMA+FFNHTMNFQ++GEKNRRRSELV+E+K+IFEEL IKY+LLPQEV +V S +
Sbjct: 1 MDANTKASKQSGEISMAENKKTSGEVVVPISGDEKDPKKPPPAASPV-----RASVDSPSGAQRAVPVSFSSPEAASYSPSANKPPKIPTTDTLTRRKSIARSVYSKPKSRFGEQSVPVDTNMFDEDISIIQEHAEPSCSSPYRNLSNQPSPNDKMGSSNANTLKETIRNVPI-TPKTPLMASPGGFGGADEDEEIYKKVSLRNKLRYHRVKVKVLIEWFVFACILGCFVASLTVHKLRQWTIWGLEIWKWCALVMVTVSGMLFTKWLVLFAVLLIELAFLLRKKVLYFVYALRKSVQFCMWLSLVLLTWVLLFRRGVERSRLATKILDYITWTMVTFLIGAFLWLLKTLLLKILASSFHVNAFFDRIQESVFHQYILLTLSGPPVMESAQMLGRANSTVSQFSFRRTKAGKDGKEKKEKAVIDINKLHQMKREKVTAWTMKMLVDVISNTGLTTFSGTLGESVYDGGNEQSDKEITNEEEAIAAAYHIFRNVAQPGCRYIDEMDLRRFMIKEEVDIVLPMIDVAETGQIDRKALTHWVVKVYNGRKALAHALNDTKTAVKQLGKLFTAILIIIIIIIWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKTIFEAIIFVFVMHPFDVGDRCVVDGVQMVVEEMNILTTVFLRYDNEKIYYPNSVLASKPISNFYRSPDMGDSLEFSIDFKTPLELIGTLKDKIKKYLEKNPSYWHPNHSVVVKEIENVNKIKMAIFFNHTMNFQDYGEKNRRRSELVLEIKRIFEELKIKYDLLPQEVHLVESKS 779
BLAST of XM_017374585.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6U3C1 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 999.964 bits (2584), Expect = 0.000e+0
Identity = 534/811 (65.84%), Postives = 635/811 (78.30%), Query Frame = 0
Match: A0A6P6U3C1 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 999.964 bits (2584), Expect = 0.000e+0
Identity = 534/811 (65.84%), Postives = 635/811 (78.30%), Query Frame = 0
Query: 1 MAANVGNSK-TGEISMLETKR-SGDVVVMVSGQEKDVKNSPRQEKDVKNSPRRLSSDSHFEGVKFVPMGTPSPENARFAPSPNRPPKIPTKESTAPRKALARSVYSKPKSRFGEQPISVESYMLEEDSNFMQDCLKSSGNSPARNMSTQASPNSRAASAH-NSFKDMNRNVSINTPRTPLMASPGGVI-VDEDEEIYKKVSNRNKLKYKKVKIKVLIDWIVFLVILGSLISCLTIDKLEHTRIWGLELWKWSLLVMVTFSGMLFTTWFMHFVVLVIEMNYLFRKKVLYFVHGLKKSAQVCLWWTLILITWLSLFNNGVHRSATATKVLDYITWTIVSVLICSFLWLFKTLLLKVLASSFHVTTFFDRVQESIFHQYVLQVLSGPPLMA-----GRADSG-SQFSFRSKKIGKKGKEDTKKAVIDINKLHQIKQEKVSAWTMKILVDVISNSGLSTISSSLDETDYYGNNEQTDKEITSEMEAIAAAYHIYSNVAQPGSMYIYELDLRRFMLKEEVDLVFPLIDVAEMGQIDKKALTEWVVKVYNGRKALAHALNDTKTAVKQLNTLVTVILIVIVFVVWLLLVEIATTKVLLFLSSQLVAAAFLFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGV--------------------------QMIVEEMNILTTVFLRYDMEKIYYPNSVLATKPISNFYRSPDMGDSLEFSICFTTPVEKIGSLREKIKKYLERTPQYWHPNHNLVVKEIENVNKIKMALFFNHTMNFQEFGEKNRRRSELVIEMKKIFEELGIKYNLLPQEVQVVNSDA 775
M AN SK +GEISM E K+ SG+VVV +SG EKD K P V R S DS + VP+ SPE A ++PS N+PPKIPT ++ RK++ARSVYSKPKSRFGEQ + V++ M +ED + +Q+ + S +SP RN+S Q SPN + S++ N+ K+ RNV I TP+TPLMASPGG DEDEEIYKKVS RNKL+Y +VK+KVLI+W VF ILG ++ LT+ KL IWGLE+WKW LVMVT SGMLFT W + F VL+IE+ +L RKKVLYFV+ L+KS Q C+W +L+L+TW+ LF GV RS ATK+LDYITWT+V+ LI +FLWL KTLLLK+LASSFHV FFDR+QES+FHQY+L LSGPP+M GRA+S SQFSFR K GK GKE +KAVIDINKLHQ+K+EKV+AWTMK+LVDVISN+GL+T S +L E+ Y G NEQ+DKEIT+E EAIAAAYHI+ NVAQPG YI E+DLRRFM+KEEVD+V P+IDVAE GQID+KALT WVVKVYNGRKALAHALNDTKTAVKQL L T ILI+I+ ++WLLL+EIATTKVL+FLSSQLV AAF+FGNTCKTIFEAIIFVFVMHPFDVGDRCV+DGV QM+VEEMNILTTVFLRYD EKIYYPNSVLA+KPISNFYRSPDMGDSLEFSI F TP+E IG+L++KIKKYLE+ P YWHPNH++VVKEIENVNKIKMA+FFNHTMNFQ++GEKNRRRSELV+E+K+IFEEL IKY+LLPQEV +V S +
Sbjct: 1 MDANTKASKQSGEISMAENKKTSGEVVVPISGDEKDPKKPPPAASPV-----RASVDSPSGAQRAVPVSFSSPEAASYSPSANKPPKIPTTDTLTRRKSIARSVYSKPKSRFGEQSVPVDTNMFDEDISIIQEHAEPSCSSPYRNLSNQPSPNDKMGSSNANTLKETIRNVPI-TPKTPLMASPGGFGGADEDEEIYKKVSLRNKLRYHRVKVKVLIEWFVFACILGCFVASLTVHKLRQWTIWGLEIWKWCALVMVTVSGMLFTKWLVLFAVLLIELAFLLRKKVLYFVYALRKSVQFCMWLSLVLLTWVLLFRRGVERSRLATKILDYITWTMVTFLIGAFLWLLKTLLLKILASSFHVNAFFDRIQESVFHQYILLTLSGPPVMESAQMLGRANSTVSQFSFRRTKAGKDGKEKKEKAVIDINKLHQMKREKVTAWTMKMLVDVISNTGLTTFSGTLGESVYDGGNEQSDKEITNEEEAIAAAYHIFRNVAQPGCRYIDEMDLRRFMIKEEVDIVLPMIDVAETGQIDRKALTHWVVKVYNGRKALAHALNDTKTAVKQLGKLFTAILIIIIIIIWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKTIFEAIIFVFVMHPFDVGDRCVVDGVQVTLMICLAFSANELFMNVFSYLKLLQMVVEEMNILTTVFLRYDNEKIYYPNSVLASKPISNFYRSPDMGDSLEFSIDFKTPLELIGTLKDKIKKYLEKNPSYWHPNHSVVVKEIENVNKIKMAIFFNHTMNFQDYGEKNRRRSELVLEIKRIFEELKIKYDLLPQEVHLVESKS 805
BLAST of XM_017374585.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9I2L1 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 991.875 bits (2563), Expect = 0.000e+0
Identity = 525/782 (67.14%), Postives = 631/782 (80.69%), Query Frame = 0
Match: A0A2G9I2L1 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 991.875 bits (2563), Expect = 0.000e+0
Identity = 525/782 (67.14%), Postives = 631/782 (80.69%), Query Frame = 0
Query: 1 MAANVGNSKT-GEISMLET-KRSGDVVVMVSGQEKDVKNSPRQEKDVKNSPRRLSSDSHFEGVKFVPMGTPSPENARFAPSPNRPPKIPTKESTAPRKALARSVYSKPKSRFGEQPISVESYMLEEDSNFMQDCLKSSGNSPARNMSTQASPNSRAASAHNSFKDMNRNVSINTPRTPLMASPGGVI-VDEDEEIYKKVSNRNKLKYKKVKIKVLIDWIVFLVILGSLISCLTIDKLEHTRIWGLELWKWSLLVMVTFSGMLFTTWFMHFVVLVIEMNYLFRKKVLYFVHGLKKSAQVCLWWTLILITWLSLFNNGVHRSATATKVLDYITWTIVSVLICSFLWLFKTLLLKVLASSFHVTTFFDRVQESIFHQYVLQVLSGPPLMA-----GRADSG-SQFSFRSKKIGKKGKEDTKKAVIDINKLHQIKQEKVSAWTMKILVDVISNSGLSTISSSLDETDYYGNNEQTDKEITSEMEAIAAAYHIYSNVAQPGSMYIYELDLRRFMLKEEVDLVFPLIDVAEMGQIDKKALTEWVVKVYNGRKALAHALNDTKTAVKQLNTLVTVILIVIVFVVWLLLVEIATTKVLLFLSSQLVAAAFLFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDMEKIYYPNSVLATKPISNFYRSPDMGDSLEFSICFTTPVEKIGSLREKIKKYLERTPQYWHPNHNLVVKEIENVNKIKMALFFNHTMNFQEFGEKNRRRSELVIEMKKIFEELGIKYNLLPQEVQVVNS 773
M AN K+ GEISM+E KR D ++ + G EK K+ ++ K +SP + S+DS F K V + PSPE R SPNRPPKIPT ++ RK+L+RSV+SKPKSRFGEQP+S++S M EE + ++ + SS NSP ++A S S K+++RN S T +TPLM SPG VDEDEEIYK+VS+R KLK +KVK KVLI+W++FL ILG LI+ LT+D+L++ RIWGL +WKW +LV+VTFSG+L T W MHFVVL+IE+NYL +KKVLYFVHGLKKS QVC+W +L+L+TW+ LF GV RS AT+VLD ITWTI S+LI + LWL KTLLLK+LASSFHV TFFDR+QESIFHQY+L LS P+M G+++S SQFSFR K GK+GKE +K VIDINKLHQ+KQEKVSAWTMK+LVD+ISNSGL+T+S+++DE+ Y G NEQTDKEIT+E EAIAAAYHI+ NVAQP YI E DLRRFM+KEEV++VFP+IDVAE G ID+KALT+WV+KVY RKALAHALNDTKTAVKQLN LVTVIL +IV +VWLLL EIATTKVL+ LSSQLV AAF+FGNTCKTIFEA+IFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFL++D KIYYPNSVLATKPISNFYRSPDMGDS+EFSI F TP+EKIG+L+EKIKKYLE+ P +WHPNHN+VVKEIENVNKIKMALFFNHTMNFQ+F EKNRRR++LV+E+K+IFEEL I+Y+LLPQEV + S
Sbjct: 1 MDANGKAPKSSGEISMMENPKRRTDAIINIPGDEKVSKD--QKFKLSADSPHKASNDSAFTVQKQVAVSCPSPETVRIIASPNRPPKIPTNDTLTRRKSLSRSVFSKPKSRFGEQPLSIDSKMFEEKESIVEGHVISSRNSPM----------NKADSNSASIKEISRNASFTT-KTPLMLSPGAFGGVDEDEEIYKRVSSRRKLKSRKVKAKVLIEWLLFLCILGFLIASLTVDRLQNLRIWGLRIWKWCVLVLVTFSGLLVTEWLMHFVVLLIELNYLLKKKVLYFVHGLKKSVQVCIWLSLVLLTWVLLFREGVKRSRLATRVLDLITWTIASLLIGAVLWLLKTLLLKILASSFHVNTFFDRIQESIFHQYILFTLSAHPIMESAQMLGKSNSNVSQFSFRVPKKGKEGKEKKQKEVIDINKLHQMKQEKVSAWTMKMLVDIISNSGLTTLSNAIDESVYDGGNEQTDKEITNEEEAIAAAYHIFRNVAQPRCDYIDEFDLRRFMIKEEVEVVFPMIDVAETGLIDRKALTDWVLKVYKDRKALAHALNDTKTAVKQLNKLVTVILTIIVIIVWLLLTEIATTKVLVVLSSQLVVAAFMFGNTCKTIFEALIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLKFDNTKIYYPNSVLATKPISNFYRSPDMGDSVEFSIDFKTPMEKIGTLKEKIKKYLEKNPLHWHPNHNVVVKEIENVNKIKMALFFNHTMNFQDFSEKNRRRTDLVLELKRIFEELNIRYDLLPQEVHLTES 769
BLAST of XM_017374585.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A068UYR6 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 974.156 bits (2517), Expect = 0.000e+0
Identity = 516/770 (67.01%), Postives = 614/770 (79.74%), Query Frame = 0
Match: A0A068UYR6 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 974.156 bits (2517), Expect = 0.000e+0
Identity = 516/770 (67.01%), Postives = 614/770 (79.74%), Query Frame = 0
Query: 15 MLETKR-SGDVVVMVSGQEKDVKNSPRQEKDVKNSPRRLSSDSHFEGVKFVPMGTPSPENARFAPSPNRPPKIPTKESTAPRKALARSVYSKPKSRFGEQPISVESYMLEEDSNFMQDCLKSSGNSPARNMSTQASPNSRAASAH-NSFKDMNRNVSINTPRTPLMASPGGVI-VDEDEEIYKKVSNRNKLKYKKVKIKVLIDWIVFLVILGSLISCLTIDKLEHTRIWGLELWKWSLLVMVTFSGMLFTTWFMHFVVLVIEMNYLFRKKVLYFVHGLKKSAQVCLWWTLILITWLSLFNNGVHRSATATKVLDYITWTIVSVLICSFLWLFKTLLLKVLASSFHVTTFFDRVQESIFHQYVLQVLSGPPLMA-----GRADSG-SQFSFRSKKIGKKGKEDTKKAVIDINKLHQIKQEKVSAWTMKILVDVISNSGLSTISSSLDETDYYGNNEQTDKEITSEMEAIAAAYHIYSNVAQPGSMYIYELDLRRFMLKEEVDLVFPLIDVAEMGQIDKKALTEWVVKVYNGRKALAHALNDTKTAVKQLNTLVTVILIVIVFVVWLLLVEIATTKVLLFLSSQLVAAAFLFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDMEKIYYPNSVLATKPISNFYRSPDMGDSLEFSICFTTPVEKIGSLREKIKKYLERTPQYWHPNHNLVVKEIENVNKIKMALFFNHTMNFQEFGEKNRRRSELVIEMKKIFEELGIKYNLLPQEVQVVNSDA 775
M E K+ SG+VVV +SG EKD K P V+ S SP A+ AP PKIPT ++ RK++ARSVYSKPKSRFGEQ + V++ M +ED + +Q+ + S +SP RN+S Q SPN + S++ N+ K+ RNV I TP+TPLMASPGG DEDEEIYKKVS RNKL+Y +VK+KVLI+W VF ILG ++ LT+ KL IWGLE+WKW LVMVT SGMLFT W + F VL+IE+ +L RKKVLYFV+ L+KS Q C+W +L+L+TW+ LF GV RS ATK+LDYITWT+V+ LI +FLWL KTLLLK+LASSFHV FFDR+QES+FHQY+L LSGPP+M GRA+S SQFSFR K GK GKE +KAVIDINKLHQ+K+EKV+AWTMK+LVDVISN+GL+T S +L E+ Y G NEQ+DKEIT+E EAIAAAYHI+ NVAQPG YI E+DLRRFM+KEEVD+V P+IDVAE GQID+KALT WVVKVYNGRKALAHALNDTKTAVKQL L T ILI+I+ ++WLLL+EIATTKVL+FLSSQLV AAF+FGNTCKTIFEAIIFVFVMHPFDVGDRCV+DGVQM+VEEMNILTTVFLRYD EKIYYPNSVLA+KPISNFYRSPDMGDSLEFSI F TP+E IG+L++KIKKYLE+ P YWHPNH++VVKEIENVNKIKMA+FFNHTMNFQ++GEKNRRRSELV+E+K+IFEEL IKY+LLPQE+ +V S +
Sbjct: 1 MAENKKTSGEVVVPISGDEKDPKKPPPAASPVRAS-------------------VDSPSGAQRAP-----PKIPTTDTLTRRKSIARSVYSKPKSRFGEQSVPVDTNMFDEDISIIQEHAEPSCSSPYRNLSNQPSPNDKMGSSNANTLKETIRNVPI-TPKTPLMASPGGFGGADEDEEIYKKVSLRNKLRYHRVKVKVLIEWFVFACILGCFVASLTVHKLRQWTIWGLEIWKWCALVMVTVSGMLFTKWLVLFAVLLIELAFLLRKKVLYFVYALRKSVQFCMWLSLVLLTWVLLFRRGVERSHLATKILDYITWTMVTFLIGAFLWLLKTLLLKILASSFHVNAFFDRIQESVFHQYILLTLSGPPVMESAQMLGRANSTVSQFSFRRTKAGKDGKEKKEKAVIDINKLHQMKREKVTAWTMKMLVDVISNTGLTTFSGTLGESVYDGGNEQSDKEITNEEEAIAAAYHIFRNVAQPGCRYIDEMDLRRFMIKEEVDIVLPMIDVAETGQIDRKALTHWVVKVYNGRKALAHALNDTKTAVKQLGKLFTAILIIIIIIIWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKTIFEAIIFVFVMHPFDVGDRCVVDGVQMVVEEMNILTTVFLRYDNEKIYYPNSVLASKPISNFYRSPDMGDSLEFSIDFKTPLELIGTLKDKIKKYLEKNPSYWHPNHSVVVKEIENVNKIKMAIFFNHTMNFQDYGEKNRRRSELVLEIKRIFEELKIKYDLLPQEIHLVESKS 745
BLAST of XM_017374585.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9TB47 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 972.23 bits (2512), Expect = 0.000e+0
Identity = 505/777 (64.99%), Postives = 628/777 (80.82%), Query Frame = 0
Match: A0A6I9TB47 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 972.23 bits (2512), Expect = 0.000e+0
Identity = 505/777 (64.99%), Postives = 628/777 (80.82%), Query Frame = 0
Query: 9 KTGEISMLET-KRSGDVVVMVSGQEKD----VKNSPRQEKD--VKNSPRRLSSDSHFEGVKFVPMGTPSPENARFAPSPNRPPKIPTKESTAPRKALARSVYSKPKSRFGEQPISVESYMLEEDSNFMQDCLKSSGNSPARNMSTQASPNSRAASAHNSFKDMNRNVSINTPRTPLMASPGGV-IVDEDEEIYKKVSNRNKLKYKKVKIKVLIDWIVFLVILGSLISCLTIDKLEHTRIWGLELWKWSLLVMVTFSGMLFTTWFMHFVVLVIEMNYLFRKKVLYFVHGLKKSAQVCLWWTLILITWLSLFNNGVHRSATATKVLDYITWTIVSVLICSFLWLFKTLLLKVLASSFHVTTFFDRVQESIFHQYVLQVLSGPPLMA-----GRADSG-SQFSFRSKKIGKKGKEDTKKAVIDINKLHQIKQEKVSAWTMKILVDVISNSGLSTISSSLDETDYYGNNEQTDKEITSEMEAIAAAYHIYSNVAQPGSMYIYELDLRRFMLKEEVDLVFPLIDVAEMGQIDKKALTEWVVKVYNGRKALAHALNDTKTAVKQLNTLVTVILIVIVFVVWLLLVEIATTKVLLFLSSQLVAAAFLFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDMEKIYYPNSVLATKPISNFYRSPDMGDSLEFSICFTTPVEKIGSLREKIKKYLERTPQYWHPNHNLVVKEIENVNKIKMALFFNHTMNFQEFGEKNRRRSELVIEMKKIFEELGIKYNLLPQEVQVV 771
++GEISM+E KR+ DV++ ++G E D V ++ + +K +SP RLS+DS F K VP+ PSPE ARF+P PN+PP+IP E+ RK+L+RSVYSKPKSRFGEQ ++++S M E ++ ++ S + S++ N +A ++ ++ +P+TPL++SPGG VDEDEEIYKKVS+R KLK++KVK+KVLI+W +FL ILG LI LT+DKL+ R+ GL +W+W +LV+VTFSG+ T W MHFVVL+IE+NYL +KKVLYFV+GLKKS QVC+W+ L+L+TW+ LF GV +S ++LD+ITWTI S+LI +FLWL KTLLLK+LASSFHV TFFDR+QES+FHQY+L LSGPP+M GR S S+ S+ K K+GKE ++KAVIDINKLH++KQ+KVSAWTMK+LVD+ISNSGL+T+S+S+DE+ Y G NEQTDKEIT+E EAIAAAYHI+ NVAQPG YI ELDL RFM+KEEV+ VFP+IDVAE GQID++ LT+WVVKVY GRKALAHALNDTKTAVKQLN LVT IL+VI+ +VWLLL IATTKVL+ LSSQLV AAF+FGNTCKTIFEAIIFVF+MHPFDVGDRCVIDGVQM VEEMNILTTVFLR+D EKIYYPNSVLATK ISNFYRSPDMGDSLEFSI F TP+EKIG+++EK KKY E+ PQ+WHPNHN+VVKEIENVNKIKMALFFNHTMNFQ++GEK+RR+++LV+EMKKIFEEL I+Y+LLPQEV++V
Sbjct: 13 RSGEISMVEDGKRTNDVIISIAGDENDSNVRVSDASKDQKPKLSADSPHRLSNDSTFSAEKSVPVSYPSPEIARFSPGPNKPPRIPKGENLTRRKSLSRSVYSKPKSRFGEQSVNIDSKMFEN-----RESVEDHVVSSRSSPSSKVDDNGVSA------MEITNKIAPGSPKTPLVSSPGGFGRVDEDEEIYKKVSSRRKLKHRKVKVKVLIEWFLFLCILGCLIVSLTVDKLQGWRVGGLRIWRWCVLVLVTFSGLFVTKWLMHFVVLLIELNYLLKKKVLYFVYGLKKSVQVCIWFGLVLVTWVLLFQEGVKQSRLVNRILDFITWTIASLLISAFLWLLKTLLLKILASSFHVNTFFDRIQESVFHQYILLTLSGPPVMELPNMLGRTSSNVSKLSYAVGKKEKEGKEKSEKAVIDINKLHRMKQDKVSAWTMKMLVDMISNSGLTTLSNSIDESFYDGGNEQTDKEITNEEEAIAAAYHIFRNVAQPGCNYIDELDLSRFMIKEEVEFVFPMIDVAETGQIDRRTLTDWVVKVYKGRKALAHALNDTKTAVKQLNKLVTGILMVIMIIVWLLLTGIATTKVLVVLSSQLVLAAFVFGNTCKTIFEAIIFVFIMHPFDVGDRCVIDGVQMTVEEMNILTTVFLRFDNEKIYYPNSVLATKAISNFYRSPDMGDSLEFSIDFKTPLEKIGAMKEKFKKYFEKNPQHWHPNHNMVVKEIENVNKIKMALFFNHTMNFQDYGEKSRRKTDLVLEMKKIFEELNIRYDLLPQEVRLV 778
BLAST of XM_017374585.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4E9Y7 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 970.689 bits (2508), Expect = 0.000e+0
Identity = 504/781 (64.53%), Postives = 618/781 (79.13%), Query Frame = 0
Match: A0A4S4E9Y7 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 970.689 bits (2508), Expect = 0.000e+0
Identity = 504/781 (64.53%), Postives = 618/781 (79.13%), Query Frame = 0
Query: 3 ANVGNSKTGEISMLETKRSG--------DVVVMVSGQEKDVKNSPRQEKDVKNSPRRLSSDSHFEGVKFVPMGTPSPENARFAPSPNRPPKIPTK--ESTAPRKALARSVYSKPKSRFGEQPISVESYMLEEDSNFMQDCLKSSGNSPARNMSTQASPNSRAASAHNSFKDMNRNVSINTPRTPLMASPGGVIV-DEDEEIYKKVSNRNKLKYKKVKIKVLIDWIVFLVILGSLISCLTIDKLEHTRIWGLELWKWSLLVMVTFSGMLFTTWFMHFVVLVIEMNYLFRKKVLYFVHGLKKSAQVCLWWTLILITWLSLFNNGVHRSATATKVLDYITWTIVSVLICSFLWLFKTLLLKVLASSFHVTTFFDRVQESIFHQYVLQVLSGPPLMA-----GRADSGSQFSFRSKKIGKKGKEDTKKAVIDINKLHQIKQEKVSAWTMKILVDVISNSGLSTISSSLDETDYYGNNEQTDKEITSEMEAIAAAYHIYSNVAQPGSMYIYELDLRRFMLKEEVDLVFPLIDVAEMGQIDKKALTEWVVKVYNGRKALAHALNDTKTAVKQLNTLVTVILIVIVFVVWLLLVEIATTKVLLFLSSQLVAAAFLFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDMEKIYYPNSVLATKPISNFYRSPDMGDSLEFSICFTTPVEKIGSLREKIKKYLERTPQYWHPNHNLVVKEIENVNKIKMALFFNHTMNFQEFGEKNRRRSELVIEMKKIFEELGIKYNLLPQE 767
N SK GEISM E K++ +VV+++SG++ +NS +S ++S+DS+ + PM SPE RF PSPN+PP+IP E+ RK+LARSV SKPKSRFGEQ + ++S ++EE MQ+ + S SP + +S +ASP ++ ++ K+ R VSI TPRTPLMASPGGV DEDE+IYKKVS++ KL+YK+VK KVLI+W+ F ILG+L++ LT+ KL+H WGLE+WKW +LV+VTFSG+ T W+MHF+V +IE N+LF++KVLYFVHGLKKS QVC+W +L+L+TW+ LF +GV R A T++LDY+TWTIVS+LI + LWL KTLLLK+LASSFHV TFFDR+QESIFHQY+LQ LSGPP+M R +S SQ SF ++ KKGKE K VID+NKL+++KQEKVSAWTMK+LVDVISN+GLSTIS++LDE+ Y G EQTDKEIT+EMEAIAAAYHI+ NVA MYIYE DLRRFM+KEEVD+VFPL + +E G ID+KALT+WVVKVY GRKALAHAL DTKTAVKQLN LVT IL V++ +VWLLL+EIATTK+L+FLSSQL+ AAF+FGNTCK IFEA+IFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYD EKIYYPNSVLATKPISNFYRSPDMGDS EFSI F TPVEKIG+L++KIK+YLE+ Q+WHPNH++VVKEIENVNKIKMALFF HTMNFQ +GEK+RR+SELV+EMK FEEL I+ + E
Sbjct: 7 GNQKASKYGEISMTENKKTSPGPAHAGPEVVIVMSGEDSKPRNSV-------DSAHQVSADSN---MGLPPMSCRSPEIGRFYPSPNKPPRIPNTNTEALTRRKSLARSVLSKPKSRFGEQSVPIDSNLIEEIGLAMQEKTEHSSFSPNQILSNRASPINKMTPTSSTLKETMRAVSI-TPRTPLMASPGGVGEEDEDEKIYKKVSSQRKLRYKRVKTKVLIEWVAFFCILGNLVASLTVHKLQHYMFWGLEVWKWCVLVLVTFSGISVTKWYMHFLVFLIERNFLFKRKVLYFVHGLKKSVQVCVWLSLVLLTWVLLFKSGVERLARTTRILDYVTWTIVSLLIGALLWLLKTLLLKILASSFHVNTFFDRIQESIFHQYILQTLSGPPIMESAEMIARVNSTSQLSF---QVKKKGKEGKAKEVIDVNKLYKMKQEKVSAWTMKVLVDVISNTGLSTISNALDESFYDGGGEQTDKEITNEMEAIAAAYHIFKNVAHSDCMYIYEDDLRRFMIKEEVDIVFPLFEGSETGIIDRKALTDWVVKVYKGRKALAHALADTKTAVKQLNKLVTGILAVVIIIVWLLLMEIATTKILVFLSSQLLVAAFMFGNTCKNIFEALIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDNEKIYYPNSVLATKPISNFYRSPDMGDSFEFSIDFRTPVEKIGALKDKIKRYLEKNSQHWHPNHSVVVKEIENVNKIKMALFFCHTMNFQNYGEKSRRKSELVLEMKLYFEELDIEIEMFSLE 773
BLAST of XM_017374585.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2Z7BSH8 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 961.444 bits (2484), Expect = 0.000e+0
Identity = 510/778 (65.55%), Postives = 622/778 (79.95%), Query Frame = 0
Match: A0A2Z7BSH8 (Mechanosensitive ion channel protein {ECO:0000256|PIRNR:PIRNR017209})
HSP 1 Score: 961.444 bits (2484), Expect = 0.000e+0
Identity = 510/778 (65.55%), Postives = 622/778 (79.95%), Query Frame = 0
Query: 10 TGEISMLE-TKRSGDVVVMVSGQEKD----VKNSPRQEK--DVKNSPRRLSSDSHFEGVKFVPMGTPSPENARFAPSPNRPPKIPTKESTAPRKALARSVYSKPKSRFGEQPISVESYMLEEDSNFMQDCLKSSGNSPARNMSTQASPNSRAASAHNSFKDMNRNVSINTPRTPLMASPGGVIVDEDEEIYKKVSNRNKLKYKKVKIKVLIDWIVFLVILGSLISCLTIDKLEHTRIWGLELWKWSLLVMVTFSGMLFTTWFMHFVVLVIEMNYLFRKKVLYFVHGLKKSAQVCLWWTLILITWLSLFNNGVHRSATATKVLDYITWTIVSVLICSFLWLFKTLLLKVLASSFHVTTFFDRVQESIFHQYVLQVLSGPPLMA-----GRADSG-SQFSFRSKKIGKKGKEDTKKAVIDINKLHQIKQEKVSAWTMKILVDVISNSGLSTISSSLDETDYYGNNEQTDKEITSEMEAIAAAYHIYSNVAQPGSMYIYELDLRRFMLKEEVDLVFPLIDVAEMGQIDKKALTEWVVKVYNGRKALAHALNDTKTAVKQLNTLVTVILIVIVFVVWLLLVEIATTKVLLFLSSQLVAAAFLFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLRYDMEKIYYPNSVLATKPISNFYRSPDMGDSLEFSICFTTPVEKIGSLREKIKKYLERTPQYWHPNHNLVVKEIENVNKIKMALFFNHTMNFQEFGEKNRRRSELVIEMKKIFEELGIKYNLLPQEVQVVNSD 774
+GEISM+E K+ D+++ + G E+D V +S +++K +SP R+S+DS K + PSPE RF+PSPN+PP+IP + R L+RSVYSKPKSRFGEQ + +++ +LEED + S++ASPN++ + S R V I TP+TPLMASPGG DEDEEIYKKVS+R KLKY+KVK KVLI+W +FL ILG LI+ LT+DKL+ +WGL++WKW +LV VTFSGML T MHFVVL+IE+N+L +KKVLYFV+GLKKS QVC+W ++L+TW+ LF GV RS T +++LD+ITWTIVS+LI SFLWL KTLLLK+LASSFHV TFFDR+QE++FHQY+L LSGPP+M GR +S SQFSFR K GK GKE +K VID++KLHQ+KQEKVSAWT+K+LVDVISNSGL+T+S+ +DE+ +G NEQTDKEIT+E EAIAAAYHI+ NVA PGS YI ELDLRRFM+KEEVD+VFP+IDVAE G+ID+K LTEWVVKVY GRKALAHALNDTKTAVKQLN LVT ILI+I+ +VWLLLV IATTKVL+FLSSQLV AAF+FGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFL++D EKI+YPNSVLATKPISNFYRSPDM D L+FSI F TPVEKIG+L++KI +Y+E PQ WHPNH+++VKEIENVNK+KMAL FNHTMNFQEFGE+N+R+SE+V+EMK+IFEEL I Y LLPQ V ++ +
Sbjct: 11 SGEISMVEGQKKENDLIIDIPGNEQDSKIPVPDSSKEQKFKSSADSPHRVSNDSALSARKSSTVSLPSPEILRFSPSPNKPPRIPESGTLTRRITLSRSVYSKPKSRFGEQSLPIDNKILEEDEPLVDS-----------RTSSRASPNTKLDVNNAS----TRTVPI-TPKTPLMASPGGF--DEDEEIYKKVSSRRKLKYRKVKTKVLIEWFLFLCILGCLIASLTVDKLQTWMVWGLQVWKWCVLVFVTFSGMLITRLLMHFVVLLIELNFLLKKKVLYFVYGLKKSVQVCVWLGVVLLTWVFLFQEGVERSHTTSRILDFITWTIVSILIGSFLWLLKTLLLKMLASSFHVNTFFDRIQEAMFHQYILFTLSGPPVMESEAMLGRTNSNVSQFSFRVSKKGKDGKEKKEKQVIDMSKLHQMKQEKVSAWTVKMLVDVISNSGLTTLSNVIDES-AFGGNEQTDKEITNEEEAIAAAYHIFLNVAPPGSKYIDELDLRRFMIKEEVDVVFPMIDVAETGKIDRKVLTEWVVKVYKGRKALAHALNDTKTAVKQLNNLVTGILIIIMIIVWLLLVGIATTKVLVFLSSQLVLAAFMFGNTCKTIFEAIIFVFVMHPFDVGDRCVIDGVQMIVEEMNILTTVFLKFDKEKIFYPNSVLATKPISNFYRSPDMSDQLDFSIDFKTPVEKIGALKDKINRYIEENPQLWHPNHSVIVKEIENVNKLKMALIFNHTMNFQEFGERNKRKSEIVLEMKRIFEELAIGYYLLPQAVHLIEKN 769
| Match Name | Stats | Description |
|---|---|---|
| A0A5B6YYR3 | E-Value: 0.000e+0, PID: 67.52 | (Putative mechanosensitive ion channel protein 10-... [more] |
| A0A6P6TVC8 | E-Value: 0.000e+0, PID: 67.90 | Mechanosensitive ion channel protein {ECO:0000256|... [more] |
| A0A2R6QYZ0 | E-Value: 0.000e+0, PID: 64.71 | Mechanosensitive ion channel protein {ECO:0000256|... [more] |
| A0A6P6U269 | E-Value: 0.000e+0, PID: 68.03 | Mechanosensitive ion channel protein {ECO:0000256|... [more] |
| A0A6P6U3C1 | E-Value: 0.000e+0, PID: 65.84 | Mechanosensitive ion channel protein {ECO:0000256|... [more] |
| A0A2G9I2L1 | E-Value: 0.000e+0, PID: 67.14 | Mechanosensitive ion channel protein {ECO:0000256|... [more] |
| A0A068UYR6 | E-Value: 0.000e+0, PID: 67.01 | Mechanosensitive ion channel protein {ECO:0000256|... [more] |
| A0A6I9TB47 | E-Value: 0.000e+0, PID: 64.99 | Mechanosensitive ion channel protein {ECO:0000256|... [more] |
| A0A4S4E9Y7 | E-Value: 0.000e+0, PID: 64.53 | Mechanosensitive ion channel protein {ECO:0000256|... [more] |
| A0A2Z7BSH8 | E-Value: 0.000e+0, PID: 65.55 | Mechanosensitive ion channel protein {ECO:0000256|... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |