XM_017382322.1

Resource Type: 
Polypeptide
Name: 
XM_017382322.1
Identifier: 
XM_017382322.1-protein
Sequence: 
MMLTYIMLLCLSYSAHSSELAFDFYAASCPMLETMVKDTVRAASSNDPRV
PGRLLRLLFHDCFVEGCDGSVLVQGNDTERSDPANASLGGFEVIEVAKNV
VEMFCPDTVSCADILVLAARDAVEFTGGPGIEVPTGRKDGKISLASNVRP
NIVDTSFSLNQMKHIFSAKGLSFDDLVTLSGAHTIGSAHCSAFSERFKLD
SKGNLKLIDTSLDSTYAAELTQQCGASQAQTSITVNNDPGTPFIFDNEYY
QMLLAHKGLFESDAVLLDNAKSLKKVEEFANDKNRFFENWAQAFLRLAST
DVKTGEDGEIRRSCSVING
Sequence Length: 
319
Sequence Checksum: 
4fa17a6736942cef063cabe5867d5595
View location in JBrowse: 
DCARv2_Chr1:49277812..49279384+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017382322.1, derives from mRNA, XM_017382322.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017382322.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017382322.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZD45 (Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060} (1.11.1.7 {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060}) (Fragment))

HSP 1 Score: 456.062 bits (1172), Expect = 1.281e-159
Identity = 214/318 (67.30%), Postives = 265/318 (83.33%), Query Frame = 0
 
Query:    2 MLTYIMLLCLSYSAHSSELAFDFYAASCPMLETMVKDTVRAASSNDPRVPGRLLRLLFHDCFVEGCDGSVLVQGNDTERSDPANASLGGFEVIEVAKNVVEMFCPDTVSCADILVLAARDAVEFTGGPGIEVPTGRKDGKISLASNVRPNIVDTSFSLNQMKHIFSAKGLSFDDLVTLSGAHTIGSAHCSAFSERFKLDSKGNLKLIDTSLDSTYAAELTQQCGASQAQTSITVNNDPGTPFIFDNEYYQMLLAHKGLFESDAVLLDNAKSLKKVEEFANDKNRFFENWAQAFLRLASTDVKTGEDGEIRRSCSVING 319
            +L +++   +SY + SS L+FDFYA SCP  E MVK+TVR+ASS DP +PG+LLRLLFHDCFVEGCD SVL++GN TER+DP N SLGGF VI+ AK V+E+FCP TVSCADILVLAARDAVE  GGPGI++PTGR+DG++S ASNVRPNIVDTSF++++M  IFS KGLS +DLVTLSGAHTIGSAHCS+FS+RF+++S G L LID SLD  YAAELT+QC    A TSITVNNDP TP +FDN+YY+ LLAH+GLF+SD+VLL++ +++ +V +FAND+  F ++W Q+FL+LAS  VKTG DGEIRRSCSV NG
Sbjct:   36 ILIFVIFSIVSYPS-SSNLSFDFYATSCPTAEVMVKNTVRSASSFDPTLPGKLLRLLFHDCFVEGCDASVLLEGNATERTDPGNRSLGGFAVIDSAKRVLEIFCPGTVSCADILVLAARDAVEIAGGPGIQIPTGRRDGRVSAASNVRPNIVDTSFTMDEMIKIFSVKGLSINDLVTLSGAHTIGSAHCSSFSDRFQVNSNGKLTLIDASLDKDYAAELTRQCPVG-ASTSITVNNDPETPILFDNQYYKDLLAHRGLFQSDSVLLNDKRTMNRVMDFANDQRSFLDSWGQSFLKLASIGVKTGVDGEIRRSCSVTNG 351
[Close]
BLAST of XM_017382322.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A858CAD5 ((Ascorbate peroxidase {ECO:0000313|EMBL:QID59357.1}) (1.11.1.11 {ECO:0000313|EMBL:QID59357.1}) (1.11.1.9 {ECO:0000313|EMBL:QID59357.1}))

HSP 1 Score: 451.055 bits (1159), Expect = 6.987e-158
Identity = 213/318 (66.98%), Postives = 266/318 (83.65%), Query Frame = 0
 
Query:    1 MMLTYIMLLCLSYSAHSSELAFDFYAASCPMLETMVKDTVRAASSNDPRVPGRLLRLLFHDCFVEGCDGSVLVQGNDTERSDPANASLGGFEVIEVAKNVVEMFCPDTVSCADILVLAARDAVEFTGGPGIEVPTGRKDGKISLASNVRPNIVDTSFSLNQMKHIFSAKGLSFDDLVTLSGAHTIGSAHCSAFSERFKLDSKGNLKLIDTSLDSTYAAELTQQCGASQAQTSITVNNDPGTPFIFDNEYYQMLLAHKGLFESDAVLLDNAKSLKKVEEFANDKNRFFENWAQAFLRLASTDVKTGEDGEIRRSCSVIN 318
            M+L   ++   S S+ SS L+FDFYAASCP  E +V++TVR+ASS+DP +PG+LLRLLFHDCFVEGCD SVL++GN TER+DPAN SLGGF VI  AK V+E+FCP+TVSCADI+ LAARDAVE TGGP I++PTGR+DG++S ASNVRPNIVDTSFSL++M  +FS+KGLS DDLVTLSGAHTIGSAHCSAFS+RF++D KGNL LID+SLD  YA ELT+QC A  A  SITVNNDPGTP +FDN+YY+ LLAHKGLF+SD+VLL++ +++ +V EFAN +  FF++W  AFL+L S  VKTG++GE+R+ CS+ N
Sbjct:   21 MLLVIFIVSSSSSSSSSSNLSFDFYAASCPPAELIVRNTVRSASSDDPSLPGKLLRLLFHDCFVEGCDASVLLEGNKTERTDPANTSLGGFSVINSAKRVLEIFCPETVSCADIVALAARDAVEITGGPAIQIPTGRRDGRVSAASNVRPNIVDTSFSLDEMIKLFSSKGLSLDDLVTLSGAHTIGSAHCSAFSDRFQVDPKGNLTLIDSSLDKNYALELTKQCPAG-ASASITVNNDPGTPLLFDNQYYKELLAHKGLFQSDSVLLNDKRTMNRVVEFANKQASFFDSWGGAFLKLTSVGVKTGDEGEVRQLCSMTN 337
[Close]
BLAST of XM_017382322.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A314LBG4 (Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060} (1.11.1.7 {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060}))

HSP 1 Score: 450.669 bits (1158), Expect = 8.534e-158
Identity = 210/302 (69.54%), Postives = 256/302 (84.77%), Query Frame = 0
 
Query:   17 SSELAFDFYAASCPMLETMVKDTVRAASSNDPRVPGRLLRLLFHDCFVEGCDGSVLVQGNDTERSDPANASLGGFEVIEVAKNVVEMFCPDTVSCADILVLAARDAVEFTGGPGIEVPTGRKDGKISLASNVRPNIVDTSFSLNQMKHIFSAKGLSFDDLVTLSGAHTIGSAHCSAFSERFKLDSKGNLKLIDTSLDSTYAAELTQQCGASQAQTSITVNNDPGTPFIFDNEYYQMLLAHKGLFESDAVLLDNAKSLKKVEEFANDKNRFFENWAQAFLRLASTDVKTGEDGEIRRSCSVIN 318
            SS L+FDFYA SCP  E MVK+TVR+ASS DP +PG+LLRLLFHDCFVEGCD S+L++GN TERSDPAN SLGGF VIE AK V+E+FCP TVSCADI+ LAARDAVEF GGP +++PTGR+DGKISLASNVRPNIVDTSFS++QM +IFSAKGLS DDLV LSGAHTIGSAHC+AFS+RF++DSKGN+ +IDTSLD  YAAELT+QC A     SITV NDP TP +FDN+YY+ L AHKGLF+SD+VL  + ++ K+V +FA+D+N FF++W Q+F+RLA+   K+G++GEIR SCS+ N
Sbjct:   36 SSNLSFDFYALSCPTAEFMVKNTVRSASSMDPTLPGKLLRLLFHDCFVEGCDASILLEGNGTERSDPANKSLGGFSVIESAKRVLEIFCPRTVSCADIIALAARDAVEFAGGPNVQIPTGRRDGKISLASNVRPNIVDTSFSIDQMINIFSAKGLSLDDLVILSGAHTIGSAHCNAFSDRFQVDSKGNVSVIDTSLDREYAAELTKQCPAGANDPSITVKNDPQTPQLFDNQYYKDLSAHKGLFQSDSVLFSDGRTRKRVMDFADDQNIFFQSWGQSFVRLAALGTKSGDEGEIRASCSLTN 337
[Close]
BLAST of XM_017382322.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7YUW8 (Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060} (1.11.1.7 {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060}))

HSP 1 Score: 450.284 bits (1157), Expect = 1.319e-157
Identity = 212/302 (70.20%), Postives = 257/302 (85.10%), Query Frame = 0
 
Query:   17 SSELAFDFYAASCPMLETMVKDTVRAASSNDPRVPGRLLRLLFHDCFVEGCDGSVLVQGNDTERSDPANASLGGFEVIEVAKNVVEMFCPDTVSCADILVLAARDAVEFTGGPGIEVPTGRKDGKISLASNVRPNIVDTSFSLNQMKHIFSAKGLSFDDLVTLSGAHTIGSAHCSAFSERFKLDSKGNLKLIDTSLDSTYAAELTQQCGASQAQTSITVNNDPGTPFIFDNEYYQMLLAHKGLFESDAVLLDNAKSLKKVEEFANDKNRFFENWAQAFLRLASTDVKTGEDGEIRRSCSVIN 318
            SS ++FDFYA SCP  E MVK+TVR+ASS DP +PG+LLRLLFHDCFVEGCD S+L++GN TERSDPAN SLGGF VIE AK V+E+FCP TVSCADI+ LAARDAVEF GGP +++PTGR+DGKISLASNVRPNIVDTSFS++QM +IFSAKGLS DDLV LSGAHTIGSAHC+AFS+RF++DSKGN+ LIDTSLD  YAAELT+QC A  A  SITV NDP TP +FDN+YY+ L AHKGLF+SD+VL  + ++ K+V +FA+D+N FF+ W+Q+F+RLA   +K+G++GEIR SCSV N
Sbjct:   36 SSNISFDFYALSCPTAEFMVKNTVRSASSMDPTLPGKLLRLLFHDCFVEGCDASILLEGNGTERSDPANKSLGGFSVIESAKRVLEIFCPRTVSCADIIALAARDAVEFAGGPNVQIPTGRRDGKISLASNVRPNIVDTSFSIDQMINIFSAKGLSLDDLVILSGAHTIGSAHCNAFSDRFQVDSKGNVSLIDTSLDREYAAELTKQCPAG-ANPSITVKNDPQTPQLFDNQYYKDLSAHKGLFQSDSVLFSDGRTRKRVMDFADDQNIFFQGWSQSFVRLADLGIKSGDEGEIRGSCSVTN 336
[Close]
BLAST of XM_017382322.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S4BVM0 (Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060} (1.11.1.7 {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060}))

HSP 1 Score: 450.284 bits (1157), Expect = 1.319e-157
Identity = 212/302 (70.20%), Postives = 257/302 (85.10%), Query Frame = 0
 
Query:   17 SSELAFDFYAASCPMLETMVKDTVRAASSNDPRVPGRLLRLLFHDCFVEGCDGSVLVQGNDTERSDPANASLGGFEVIEVAKNVVEMFCPDTVSCADILVLAARDAVEFTGGPGIEVPTGRKDGKISLASNVRPNIVDTSFSLNQMKHIFSAKGLSFDDLVTLSGAHTIGSAHCSAFSERFKLDSKGNLKLIDTSLDSTYAAELTQQCGASQAQTSITVNNDPGTPFIFDNEYYQMLLAHKGLFESDAVLLDNAKSLKKVEEFANDKNRFFENWAQAFLRLASTDVKTGEDGEIRRSCSVIN 318
            SS ++FDFYA SCP  E MVK+TVR+ASS DP +PG+LLRLLFHDCFVEGCD S+L++GN TERSDPAN SLGGF VIE AK V+E+FCP TVSCADI+ LAARDAVEF GGP +++PTGR+DGKISLASNVRPNIVDTSFS++QM +IFSAKGLS DDLV LSGAHTIGSAHC+AFS+RF++DSKGN+ LIDTSLD  YAAELT+QC A  A  SITV NDP TP +FDN+YY+ L AHKGLF+SD+VL  + ++ K+V +FA+D+N FF+ W+Q+F+RLA   +K+G++GEIR SCSV N
Sbjct:   36 SSNISFDFYALSCPTAEFMVKNTVRSASSMDPTLPGKLLRLLFHDCFVEGCDASILLEGNGTERSDPANKSLGGFSVIESAKRVLEIFCPRTVSCADIIALAARDAVEFAGGPNVQIPTGRRDGKISLASNVRPNIVDTSFSIDQMINIFSAKGLSLDDLVILSGAHTIGSAHCNAFSDRFQVDSKGNVSLIDTSLDREYAAELTKQCPAG-ANPSITVKNDPQTPQLFDNQYYKDLSAHKGLFQSDSVLFSDGRTRKRVMDFADDQNIFFQGWSQSFVRLADLGIKSGDEGEIRGSCSVTN 336
[Close]
BLAST of XM_017382322.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZDT8 (Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060} (1.11.1.7 {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060}) (Fragment))

HSP 1 Score: 449.129 bits (1154), Expect = 2.242e-157
Identity = 211/318 (66.35%), Postives = 264/318 (83.02%), Query Frame = 0
 
Query:    2 MLTYIMLLCLSYSAHSSELAFDFYAASCPMLETMVKDTVRAASSNDPRVPGRLLRLLFHDCFVEGCDGSVLVQGNDTERSDPANASLGGFEVIEVAKNVVEMFCPDTVSCADILVLAARDAVEFTGGPGIEVPTGRKDGKISLASNVRPNIVDTSFSLNQMKHIFSAKGLSFDDLVTLSGAHTIGSAHCSAFSERFKLDSKGNLKLIDTSLDSTYAAELTQQCGASQAQTSITVNNDPGTPFIFDNEYYQMLLAHKGLFESDAVLLDNAKSLKKVEEFANDKNRFFENWAQAFLRLASTDVKTGEDGEIRRSCSVING 319
            +L  ++   +SY + SS L+FDFYA SCP  E MVK+TVR+ASS DP + G+LLRLLFHDCFVEGCD SVL++GN TER+DPAN SLGGF VI+ AK V+E+FCP  VSCADILVLAARDAVE  GGPGI++PTGR+DG++S ASNVRPNIVDTSF++++M  IFS KGLS +DLVTLSGAHTIGSAHCS+FS+RF+++S G L LID SLD  YAAEL++QC    A TSITVNNDP TP +FDN+YY+ LLAH+GLF+SD+VLL++ +++ +V +FAND++ F ++W Q+FL+LAS  VKTG +GEIRRSCSV NG
Sbjct:    7 LLILVIFFIVSYPS-SSNLSFDFYATSCPTAEVMVKNTVRSASSFDPTLSGKLLRLLFHDCFVEGCDASVLLEGNATERTDPANRSLGGFAVIDSAKRVLEIFCPGIVSCADILVLAARDAVEIAGGPGIQIPTGRRDGRVSAASNVRPNIVDTSFTMDEMIKIFSVKGLSINDLVTLSGAHTIGSAHCSSFSDRFQVNSNGKLTLIDASLDKGYAAELSRQCPVG-ASTSITVNNDPETPILFDNQYYKDLLAHRGLFQSDSVLLNDKRTMNQVMDFANDQSSFLDSWGQSFLKLASIGVKTGVEGEIRRSCSVTNG 322
[Close]
BLAST of XM_017382322.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3BU70 (Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060} (1.11.1.7 {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060}))

HSP 1 Score: 446.047 bits (1146), Expect = 3.914e-156
Identity = 208/315 (66.03%), Postives = 260/315 (82.54%), Query Frame = 0
 
Query:    4 TYIMLLCLSYSAHSSELAFDFYAASCPMLETMVKDTVRAASSNDPRVPGRLLRLLFHDCFVEGCDGSVLVQGNDTERSDPANASLGGFEVIEVAKNVVEMFCPDTVSCADILVLAARDAVEFTGGPGIEVPTGRKDGKISLASNVRPNIVDTSFSLNQMKHIFSAKGLSFDDLVTLSGAHTIGSAHCSAFSERFKLDSKGNLKLIDTSLDSTYAAELTQQCGASQAQTSITVNNDPGTPFIFDNEYYQMLLAHKGLFESDAVLLDNAKSLKKVEEFANDKNRFFENWAQAFLRLASTDVKTGEDGEIRRSCSVIN 318
            ++++ L LS+ A +  L+F FYAA+CP  E MV++TVR+ASS DP VPG+LLRLLFHDCFVEGCD SVLV+GN TERSDPAN SLGGFEVI+ AK  +E+FCP TVSCADI+VLAARDAVEFTGGP +EVPTGR+DGKIS ASNVRPNI DTSFS+NQM ++FS+KGLS DDLV LSGAHTIG++HCSAFS+RF+ +  G L LID SLD +YA EL ++C A  A T+ TV NDP T F+FDN+YY+ +L+HKGL +SD+VL+ + ++  +VE FAND+  FFENWAQ+FL+L+S  VK+G++GEIR SCS +N
Sbjct:   13 SFLVFLALSFPATTVALSFGFYAATCPAAELMVRNTVRSASSVDPTVPGKLLRLLFHDCFVEGCDASVLVEGNGTERSDPANKSLGGFEVIDSAKRTLEIFCPGTVSCADIVVLAARDAVEFTGGPSVEVPTGRRDGKISAASNVRPNIADTSFSVNQMMNLFSSKGLSVDDLVILSGAHTIGTSHCSAFSDRFRRNPNGQLTLIDASLDGSYADELMRRCPAG-AATAATVENDPATAFVFDNQYYRNILSHKGLLQSDSVLISDGRTRARVESFANDQIGFFENWAQSFLKLSSIGVKSGDEGEIRLSCSTVN 326
[Close]
BLAST of XM_017382322.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5D3D8Y9 (Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060} (1.11.1.7 {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060}))

HSP 1 Score: 446.047 bits (1146), Expect = 3.914e-156
Identity = 208/315 (66.03%), Postives = 260/315 (82.54%), Query Frame = 0
 
Query:    4 TYIMLLCLSYSAHSSELAFDFYAASCPMLETMVKDTVRAASSNDPRVPGRLLRLLFHDCFVEGCDGSVLVQGNDTERSDPANASLGGFEVIEVAKNVVEMFCPDTVSCADILVLAARDAVEFTGGPGIEVPTGRKDGKISLASNVRPNIVDTSFSLNQMKHIFSAKGLSFDDLVTLSGAHTIGSAHCSAFSERFKLDSKGNLKLIDTSLDSTYAAELTQQCGASQAQTSITVNNDPGTPFIFDNEYYQMLLAHKGLFESDAVLLDNAKSLKKVEEFANDKNRFFENWAQAFLRLASTDVKTGEDGEIRRSCSVIN 318
            ++++ L LS+ A +  L+F FYAA+CP  E MV++TVR+ASS DP VPG+LLRLLFHDCFVEGCD SVLV+GN TERSDPAN SLGGFEVI+ AK  +E+FCP TVSCADI+VLAARDAVEFTGGP +EVPTGR+DGKIS ASNVRPNI DTSFS+NQM ++FS+KGLS DDLV LSGAHTIG++HCSAFS+RF+ +  G L LID SLD +YA EL ++C A  A T+ TV NDP T F+FDN+YY+ +L+HKGL +SD+VL+ + ++  +VE FAND+  FFENWAQ+FL+L+S  VK+G++GEIR SCS +N
Sbjct:   13 SFLVFLALSFPATTVALSFGFYAATCPAAELMVRNTVRSASSVDPTVPGKLLRLLFHDCFVEGCDASVLVEGNGTERSDPANKSLGGFEVIDSAKRTLEIFCPGTVSCADIVVLAARDAVEFTGGPSVEVPTGRRDGKISAASNVRPNIADTSFSVNQMMNLFSSKGLSVDDLVILSGAHTIGTSHCSAFSDRFRRNPNGQLTLIDASLDGSYADELMRRCPAG-AATAATVENDPATAFVFDNQYYRNILSHKGLLQSDSVLISDGRTRARVESFANDQIGFFENWAQSFLKLSSIGVKSGDEGEIRLSCSTVN 326
[Close]
BLAST of XM_017382322.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7GAF2 (Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060} (1.11.1.7 {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060}))

HSP 1 Score: 445.662 bits (1145), Expect = 9.228e-156
Identity = 210/318 (66.04%), Postives = 265/318 (83.33%), Query Frame = 0
 
Query:    1 MMLTYIMLLCLSYSAHSSELAFDFYAASCPMLETMVKDTVRAASSNDPRVPGRLLRLLFHDCFVEGCDGSVLVQGNDTERSDPANASLGGFEVIEVAKNVVEMFCPDTVSCADILVLAARDAVEFTGGPGIEVPTGRKDGKISLASNVRPNIVDTSFSLNQMKHIFSAKGLSFDDLVTLSGAHTIGSAHCSAFSERFKLDSKGNLKLIDTSLDSTYAAELTQQCGASQAQTSITVNNDPGTPFIFDNEYYQMLLAHKGLFESDAVLLDNAKSLKKVEEFANDKNRFFENWAQAFLRLASTDVKTGEDGEIRRSCSVIN 318
            +++ +I+    S S+ SS L+FDFYAASCP  E +V++TVR+ASS+DP +PG+LLRLLFHDCFVEGCD SVL++GN TE++DPAN SLGGF VI  AK V+E+FCP TVSCADI+ LAARDAVE TGGP I++P GR+DG++S ASNVRPNIVDTSFSL++M  +FS+KGLS DDLV LSGAHTIGSAHCSAFS+RF++D KGNL LID+SLD  YA ELT+QC A  A  SITVNNDPGTP +FDN+YY+ LLAHKGLF+SD+VLL++ +++ KV EFAN++  FF++W  AFL+L S  VKTG++GE+R+ CS+ N
Sbjct:   22 LLVIFIVSSSSSSSSSSSNLSFDFYAASCPPAELIVRNTVRSASSDDPSLPGKLLRLLFHDCFVEGCDASVLLEGNKTEKTDPANTSLGGFSVINSAKRVLEIFCPGTVSCADIVALAARDAVEITGGPAIQIPIGRRDGRVSAASNVRPNIVDTSFSLDEMIKLFSSKGLSLDDLVALSGAHTIGSAHCSAFSDRFQVDPKGNLTLIDSSLDKNYALELTKQCPAG-ASASITVNNDPGTPLLFDNQYYKELLAHKGLFQSDSVLLNDKRTMNKVVEFANEQASFFDSWGGAFLKLTSVGVKTGDEGEVRQLCSMTN 338
[Close]
BLAST of XM_017382322.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6P6TQT7 (Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060} (1.11.1.7 {ECO:0000256|ARBA:ARBA00012313, ECO:0000256|RuleBase:RU362060}))

HSP 1 Score: 444.506 bits (1142), Expect = 1.753e-155
Identity = 204/317 (64.35%), Postives = 259/317 (81.70%), Query Frame = 0
 
Query:    2 MLTYIMLLCLSYSAHSSELAFDFYAASCPMLETMVKDTVRAASSNDPRVPGRLLRLLFHDCFVEGCDGSVLVQGNDTERSDPANASLGGFEVIEVAKNVVEMFCPDTVSCADILVLAARDAVEFTGGPGIEVPTGRKDGKISLASNVRPNIVDTSFSLNQMKHIFSAKGLSFDDLVTLSGAHTIGSAHCSAFSERFKLDSKGNLKLIDTSLDSTYAAELTQQCGASQAQTSITVNNDPGTPFIFDNEYYQMLLAHKGLFESDAVLLDNAKSLKKVEEFANDKNRFFENWAQAFLRLASTDVKTGEDGEIRRSCSVIN 318
            +LT+++     +++ S  L+FDFYA SCP  E +VK+TVR ASS DP +PG+LLRL+FHDCFVEGCD S+L+QGN TERSDPAN+ LGGF  I+ AK V+E FCP TVSCADIL LAARDAVEF GGP ++VPTGR+DG+ISLASNVRPNI+DTSF+++QM  IFSAKGLS DDLVTLSGAHTIGSAHC+AF +RFK+DSKGN  LID+SLD  YAA+LT++C    A TS T +NDP TP +FDN+YY+ LLAHKGLF+SD+VL+ + +++ KV+ FAN+++ FFE+W Q+FLRL S  VK   +GE+R+ C+V+N
Sbjct:   11 LLTFVLFHLALFASSSYSLSFDFYATSCPTAEIIVKNTVREASSLDPTLPGKLLRLVFHDCFVEGCDASILLQGNGTERSDPANSFLGGFSTIDSAKRVLEFFCPGTVSCADILALAARDAVEFAGGPSVQVPTGRRDGRISLASNVRPNIIDTSFTMDQMLKIFSAKGLSLDDLVTLSGAHTIGSAHCNAFMDRFKVDSKGNFTLIDSSLDREYAAQLTKRCPGGAAATSPTTDNDPETPSLFDNQYYKDLLAHKGLFQSDSVLVSDKRTISKVQNFANNQDSFFESWEQSFLRLTSIGVKIDNEGEVRQLCAVVN 327
Match NameStatsDescription
A0A5B6ZD45E-Value: 1.281e-159, PID: 67.30Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:000... [more]
A0A858CAD5E-Value: 6.987e-158, PID: 66.98(Ascorbate peroxidase {ECO:0000313|EMBL:QID59357.1... [more]
A0A314LBG4E-Value: 8.534e-158, PID: 69.54Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:000... [more]
A0A1U7YUW8E-Value: 1.319e-157, PID: 70.20Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:000... [more]
A0A1S4BVM0E-Value: 1.319e-157, PID: 70.20Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:000... [more]
A0A5B6ZDT8E-Value: 2.242e-157, PID: 66.35Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:000... [more]
A0A1S3BU70E-Value: 3.914e-156, PID: 66.03Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:000... [more]
A0A5D3D8Y9E-Value: 3.914e-156, PID: 66.03Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:000... [more]
A0A7J7GAF2E-Value: 9.228e-156, PID: 66.04Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:000... [more]
A0A6P6TQT7E-Value: 1.753e-155, PID: 64.35Peroxidase {ECO:0000256|ARBA:ARBA00012313, ECO:000... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.