Resource Type:
Polypeptide
Name:
XM_017392813.1
Identifier:
XM_017392813.1-protein
Sequence:
MRIAEISSPEIRSSPGDPQSHLLSQIESSIKLLESQSPPATLSSDDLRLS
LTQLKSLSPFSNSLKLHVWKLSYRLWNACVDLSNASGVKLNDEHAKLRQV
SADLLFLAADVTEIPSPAFKSASFFYKTGVIWHDLRKFDPASSCFEKATH
LISSIDIASISDPEERKLLLNLNIARSRTAWEVADRNIAIALLNRSKTVL
FGLAENYCALANQYLIFGKTILAKNEISSVADALKLMNEALDLCEKGLRI
VKRSNESLGLKELKSKTLRFMAASHLQTDDFESVLKCVRVLRDGDGDSDN
HPSLSVLAMKAWLGVGRFEEAEKELRGMVVNKGIPEAVWVSAVEFYFQAV
GTAGAETAKGIFLGLLGRCHVSAGAATRVVHRVLGDGVGSEGSKVRAKVV
AELVSDDRVVALFAGDAAKERTVMHSLLWNCAADHFRFKDYETSAEMFEK
SLLYVPHNTENRILRAKGFRVLCLCHLGLSKLKQAEEYIDEAEKLEPNIA
CAFLKFKIYLQKIEHDKAVTQVQSMPACLDFSPDFLSLSAHEAVACHALP
VAVASLSVLLKFYSSGKSMPTTEVVVLRTLVTIISQDPLHDSDVLKYMKQ
AHARLSELGADSFFGKGEVGTRERNWFAVQSWNIGLRTGKEKNYELSWNF
FMLASEFYGTMIDGDMDGNNVMVCKSLILAVTAKIADEKQRNVTLLESEV
KQAIELLDRTGKILLSCSAGPQPNIDQTTNIEPYFLFIHTLDACDLYSRL
SDTGPQLLRLIKSFASSKSCNPKYLLQIGLISSDGPRSNLEVATYALNTC
LSSLLDSQSPDYGSVAQIMRKLISLSGVYKADTDDDEVYGMYRQAYRIMV
GLKEGEYPIEEGKWLAMTAWNRAALAVRMGPSSAAMKWMNMGWELAGKVQ
GMQTYQSCMEDFIASFKDKCKATNSN
Sequence Length:
926
Sequence Checksum:
1864564c92a678afdf23be0e3a546a88
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017392813.1, derives from mRNA, XM_017392813.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017392813.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017392813.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5BP66 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1362.05 bits (3524), Expect = 0.000e+0
Identity = 675/928 (72.74%), Postives = 772/928 (83.19%), Query Frame = 0
Match: A0A5J5BP66 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1362.05 bits (3524), Expect = 0.000e+0
Identity = 675/928 (72.74%), Postives = 772/928 (83.19%), Query Frame = 0
Query: 1 MRIAEISSPEIRSSPGDPQSHLLSQIESSIKLLESQSPPATLS---SDDLRLSLTQLKSLSPFSNSLKLHVWKLSYRLWNACVDLSNASGV-----KLNDEHAKLRQVSADLLFLAADVTEIPSPAFKSASFFYKTGVIWHDLRKFDPASSCFEKATHLISSIDIASISDPEERKLLLNLNIARSRTAWEVADRNIAIALLNRSKTVLFGLAENYCALANQYLIFGKTILAKNEISSVADALKLMNEALDLCEKGLRIVKRSNESLGLKELKSKTLRFMAASHLQTDDFESVLKCVRVLRDGDGDSDNHPSLSVLAMKAWLGVGRFEEAEKELRGMVVNKGIPEAVWVSAVEFYFQAVGTAGAETAKGIFLGLLGRCHVSAGAATRVVHRVLGDGVGSEGSKVRAKVVAELVSDDRVVALFAG-DAAKERTVMHSLLWNCAADHFRFKDYETSAEMFEKSLLYVPHNTENRILRAKGFRVLCLCHLGLSKLKQAEEYIDEAEKLEPNIACAFLKFKIYLQKIEHDKAVTQVQSMPACLDFSPDFLSLSAHEAVACHALPVAVASLSVLLKFYSSGKSMPTTEVVVLRTLVTIISQDPLHDSDVLKYMKQAHARLSELGADSFFGKGEVGTRERNWFAVQSWNIGLRTGKEKNYELSWNFFMLASEFYGTMIDGDMDGNNVMVCKSLILAVTAKIADEKQRNVTLLESEVKQAIELLDRTGKILLSCSAGPQPNIDQTTNIEPYFLFIHTLDACDLYSRLSDTGPQLLRLIKSFASSKSCNPKYLLQIGLISSDGPRSNLEVATYALNTCLSSLLDSQSPDYGSVAQIMRKLISLSGVYKADTDDDEVYGMYRQAYRIMVGLKEGEYPIEEGKWLAMTAWNRAALAVRMGPSSAAMKWMNMGWELAGKVQGMQTYQSCMEDFIASFKDK 919
MRI+EISSPE+R S + QSH+LSQIESSIK LE S A L SDDLRL LT+L SLSP SNS+KL +WKLSYRLWNACVDLSNASGV K+++EHAKLRQVSADLLF+++DV IPSPAFKSASFFYKTG+IWHDLRKFD AS+CFEKAT L S++DI+S+ EERKLLL LNIARSRTAWEV+D+N+AI LLNR+K +LFG AENY ALANQY++FGK +L+KNE+SSV +AL+LMNEA +LCEKGLRIVKR +E+L LK L+ KTLRF+AASHLQ D+FESVLKCVRVLRDG DNHPSLSVLAMKAWLG+GR+ EAEKELRGMV+NKGIPE VWVSAVE YFQA G AGAET KG+FLGLLGRCHVSAG+A RVVH+++GDGVG EG++VRAKVVAELVSD+RVVALFAG +AAKERT MH++LWNCAADHFR KDYETSAEMFEKS+LYVP++ EN+ILRAKGFRVLCLCHLG+S+L +A+EYI+EAEKLEPNI CAFLKFKI L K +H+ A+TQVQ+M CLDF+PDFL LSAHE+VACHALPVAVASLS LL FYSSGKSMPTTEV V RTLVTI++QDP +S+VLKYMK+AHARL+ELG D FFGKGEVG RERNWFA WNIG R GKE+NYEL FF LASEFY ADEKQR TLL+SEV+QAIELLD+ GKIL S SAG Q N Q T IEP FI+TLDA DL+SRL+D G Q L LIKSFA+SKSCNP YLLQIGL +S GP+SN EVAT+ALNTCLS+LL S SPDY VA I+RKLI++ +YK DTDD+ VYGMY+ AYRIMVGLKEGEYP EEGKWLAMTAWNRAAL V++G + AA KWMN+G ELAGKV GMQTY+SCMEDF+A F+ K
Sbjct: 1 MRISEISSPELRPSLHESQSHVLSQIESSIKELECHSSEAPLKETLSDDLRLCLTKLTSLSPLSNSIKLQIWKLSYRLWNACVDLSNASGVRHSGLKVDEEHAKLRQVSADLLFISSDVAGIPSPAFKSASFFYKTGLIWHDLRKFDFASNCFEKATDLTSNLDISSVPGGEERKLLLELNIARSRTAWEVSDQNLAITLLNRAKNILFGCAENYKALANQYMMFGKIVLSKNEVSSVNEALRLMNEAFELCEKGLRIVKRQDETLALKALRLKTLRFIAASHLQRDEFESVLKCVRVLRDGS-SGDNHPSLSVLAMKAWLGLGRYGEAEKELRGMVINKGIPEGVWVSAVESYFQAAGAAGAETTKGVFLGLLGRCHVSAGSAIRVVHKLVGDGVGGEGARVRAKVVAELVSDERVVALFAGQEAAKERTAMHAVLWNCAADHFRSKDYETSAEMFEKSMLYVPYDIENKILRAKGFRVLCLCHLGVSQLDRAQEYINEAEKLEPNITCAFLKFKINLLKSDHNGAITQVQAMTTCLDFTPDFLCLSAHESVACHALPVAVASLSNLLNFYSSGKSMPTTEVTVFRTLVTILTQDPGKESEVLKYMKRAHARLNELGPDHFFGKGEVGRRERNWFAANLWNIGTRIGKERNYELCTEFFRLASEFY---------------------------ADEKQRKSTLLDSEVRQAIELLDKAGKILTSVSAGTQANDYQITTIEPNLFFIYTLDAYDLHSRLNDLGSQQLTLIKSFAASKSCNPNYLLQIGLNASQGPQSNPEVATFALNTCLSALLSSPSPDYQYVALIVRKLIAVGAIYKGDTDDNVVYGMYKHAYRIMVGLKEGEYPTEEGKWLAMTAWNRAALPVKLGHAEAAKKWMNIGLELAGKVPGMQTYRSCMEDFLAGFEKK 900
BLAST of XM_017392813.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7FPZ4 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1361.28 bits (3522), Expect = 0.000e+0
Identity = 681/930 (73.23%), Postives = 782/930 (84.09%), Query Frame = 0
Match: A0A7J7FPZ4 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1361.28 bits (3522), Expect = 0.000e+0
Identity = 681/930 (73.23%), Postives = 782/930 (84.09%), Query Frame = 0
Query: 1 MRIAEISSPEIRSSPGDPQSHLLSQIESSIKLLESQSP----PATLSSDDLRLSLTQLKSLSPFSNSLKLHVWKLSYRLWNACVDLSNASGVKLND-----EHAKLRQVSADLLFLAADVTEIPSPAFKSASFFYKTGVIWHDLRKFDPASSCFEKATHLISSIDIASISDPEERKLLLNLNIARSRTAWEVADRNIAIALLNRSKTVLFGLAENYCALANQYLIFGKTILAKNEISSVADALKLMNEALDLCEKGLRIVKRSNESLGLKELKSKTLRFMAASHLQTDDFESVLKCVRVLRDGDGDSDNHPSLSVLAMKAWLGVGRFEEAEKELRGMVVNKGIPEAVWVSAVEFYFQAVGTAGAETAKGIFLGLLGRCHVSAGAATRVVHRVLGDGVGSEGSKVRAKVVAELVSDDRVVALFAGD-AAKERTVMHSLLWNCAADHFRFKDYETSAEMFEKSLLYVPHNTENRILRAKGFRVLCLCHLGLSKLKQAEEYIDEAEKLEPNIACAFLKFKIYLQKIEHDKAVTQVQSMPACLDFSPDFLSLSAHEAVACHALPVAVASLSVLLKFYSSGKSMPTTEVVVLRTLVTIISQDPLHDSDVLKYMKQAHARLSELGADSFFGKGEVGTRERNWFAVQSWNIGLRTGKEKNYELSWNFFMLASEFYGTMIDGDMDGNNVMVCKSLILAVTAKIADEKQRNVTLLESEVKQAIELLDRTGKILLSCSAGPQPNIDQTTNIEPYFLFIHTLDACDLYSRLSDTGPQLLRLIKSFASSKSCNPKYLLQIGLISSDGPRSNLEVATYALNTCLSSLLDSQSPDYGSVAQIMRKLISLSGVYKA-DTDDDEVYGMYRQAYRIMVGLKEGEYPIEEGKWLAMTAWNRAALAVRMGPSSAAMKWMNMGWELAGKVQGMQTYQSCMEDFIASFKDK 919
MRI+EISSP++R S DPQSH+LSQIESSIK LE P P TLSSD LRLSLTQL SLSPFSNS+KL +WKLSYRLWN+CVDL+NA+GV+ + EHAKLR VSADLLFLAADV +PSPAFKSASFFYKTG+IWHDLR F+ A++CFEKAT L S IDI ++ D EERKLLL LNIARSRTAWE++DRN+AI LLNRSK++LFG AENY ALANQYL+FGK +L+KNE+ V + LKLMNEALDLCEKGLRIVKR +E+L LK L+SKTLRF+AASHLQ D+FESVLKCVRVLRDG G D+HPSLSVLAMKAWLG+GR+ EAEKEL+GMVVNKG+PE VWVSAVE YFQA G AGAET KG+F GLLGRCHVSAGAA RVV RV+GDGV EG VRAKVVAELVSD+RVVALFAG+ KERT MH++LWNCAA HF+ KDYETSAEMFEKS+LYVP N ENRILRAKGFRVLCLCHLGLS+L +AEEYI+EA+KLEP+IACAFLKFKI LQK +H+ A+TQVQ M CLDF+PDFLSLSAHEA+ACHA+PVAVASLS LL FYS GKSMPTTEV VLRTLV I++QD ++S+VLK++KQAH RL ELG D FFGKGEVG RER+W AV WNIG +TGKE+NYEL FF LASEFYG ++DG+++GNNVMVCKSLIL V+A IADEKQR TLL++E+KQAIELLDR G IL S S+G QP+ D+ T IEP F FI+TL+A DL++RL+ G Q L LIK+FA+SKSCN YLLQIGL +S GPRSN EVA ALNTCLS LL S SPDY VA +RKLIS+S ++K DDD+V+GMY+QAYRIMVGLKEGEYPIEEGKWLAMTAWNRAAL VR+G + A KWM +G ELAGKV GM TY++CMEDF+A F+ K
Sbjct: 1 MRISEISSPDLRRSLNDPQSHILSQIESSIKDLERHPPESPSPETLSSD-LRLSLTQLTSLSPFSNSVKLQIWKLSYRLWNSCVDLANAAGVRSSSAAPSGEHAKLRHVSADLLFLAADVVGVPSPAFKSASFFYKTGLIWHDLRNFNLANTCFEKATDLTSRIDIGAVIDSEERKLLLGLNIARSRTAWEISDRNLAITLLNRSKSLLFGCAENYKALANQYLMFGKIVLSKNEVCGVNEGLKLMNEALDLCEKGLRIVKRQDETLALKTLRSKTLRFIAASHLQRDEFESVLKCVRVLRDGGG-GDDHPSLSVLAMKAWLGLGRYGEAEKELKGMVVNKGVPEGVWVSAVESYFQAAGVAGAETTKGVFFGLLGRCHVSAGAAIRVVRRVVGDGVIGEGP-VRAKVVAELVSDERVVALFAGEEVVKERTTMHAILWNCAAHHFQSKDYETSAEMFEKSMLYVPFNIENRILRAKGFRVLCLCHLGLSQLDRAEEYINEADKLEPSIACAFLKFKINLQKNDHNGAITQVQVMTTCLDFTPDFLSLSAHEAIACHAIPVAVASLSNLLNFYSKGKSMPTTEVTVLRTLVMILTQDSGNESEVLKFIKQAHKRLFELGPDCFFGKGEVGRRERDWLAVNLWNIGTKTGKERNYELCAEFFRLASEFYGVVVDGEVEGNNVMVCKSLILTVSAMIADEKQRKATLLDNEIKQAIELLDRAGMILKSISSGSQPDGDEITTIEPNFFFIYTLEAYDLHARLNIMGSQQLLLIKNFAASKSCNSNYLLQIGLHASQGPRSNPEVAALALNTCLSILLASPSPDYQCVALAVRKLISVSAIHKGDADDDDDVHGMYKQAYRIMVGLKEGEYPIEEGKWLAMTAWNRAALPVRLGQTEEARKWMKIGLELAGKVPGMGTYRACMEDFLAGFESK 927
BLAST of XM_017392813.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4D330 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1360.51 bits (3520), Expect = 0.000e+0
Identity = 680/930 (73.12%), Postives = 783/930 (84.19%), Query Frame = 0
Match: A0A4S4D330 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1360.51 bits (3520), Expect = 0.000e+0
Identity = 680/930 (73.12%), Postives = 783/930 (84.19%), Query Frame = 0
Query: 1 MRIAEISSPEIRSSPGDPQSHLLSQIESSIKLLESQSP----PATLSSDDLRLSLTQLKSLSPFSNSLKLHVWKLSYRLWNACVDLSNASGVKLND-----EHAKLRQVSADLLFLAADVTEIPSPAFKSASFFYKTGVIWHDLRKFDPASSCFEKATHLISSIDIASISDPEERKLLLNLNIARSRTAWEVADRNIAIALLNRSKTVLFGLAENYCALANQYLIFGKTILAKNEISSVADALKLMNEALDLCEKGLRIVKRSNESLGLKELKSKTLRFMAASHLQTDDFESVLKCVRVLRDGDGDSDNHPSLSVLAMKAWLGVGRFEEAEKELRGMVVNKGIPEAVWVSAVEFYFQAVGTAGAETAKGIFLGLLGRCHVSAGAATRVVHRVLGDGVGSEGSKVRAKVVAELVSDDRVVALFAGD-AAKERTVMHSLLWNCAADHFRFKDYETSAEMFEKSLLYVPHNTENRILRAKGFRVLCLCHLGLSKLKQAEEYIDEAEKLEPNIACAFLKFKIYLQKIEHDKAVTQVQSMPACLDFSPDFLSLSAHEAVACHALPVAVASLSVLLKFYSSGKSMPTTEVVVLRTLVTIISQDPLHDSDVLKYMKQAHARLSELGADSFFGKGEVGTRERNWFAVQSWNIGLRTGKEKNYELSWNFFMLASEFYGTMIDGDMDGNNVMVCKSLILAVTAKIADEKQRNVTLLESEVKQAIELLDRTGKILLSCSAGPQPNIDQTTNIEPYFLFIHTLDACDLYSRLSDTGPQLLRLIKSFASSKSCNPKYLLQIGLISSDGPRSNLEVATYALNTCLSSLLDSQSPDYGSVAQIMRKLISLSGVYKA-DTDDDEVYGMYRQAYRIMVGLKEGEYPIEEGKWLAMTAWNRAALAVRMGPSSAAMKWMNMGWELAGKVQGMQTYQSCMEDFIASFKDK 919
MRI+EISSP++R S DPQSH+LSQIESSIK LE SP P TLSSD LRLSLTQL SLSPFSNS+KL +WKLSYRLWN+CVDL+NA+GV+ + EHAKLR VSADLLFLAADV +PSPAFKSASFFYKTG+IWHDLR F+ A++CFEKAT L S IDI ++ D EERKLLL LNIARSRTAWE++DRN+AI LLNRSK++LFG AENY ALANQYL+FGK +L+KNE+ V + LKLMNEALDLCEKGLRIVKR +E+L LK L+SKTLRF+AASHLQ D+FESVLKCVRVLRDG G D+HPSLSVLAMKAWLG+GR+ EAEKEL+GMVVNKG+PE VWVSAVE YFQA G AGAET KG+F GLLGRCHVSAGAA RVV RV+GDGV EG VRAKVVAELVSD+RVVALFAG+ KERT MH++LWNCAA HF+ KDYETSAEMFEKS+LYVP N ENRILRAKGFRVLCLCHLGLS+L +AEEYI+EA+KLEP+IACAFLKFKI LQK +H+ A+TQVQ M CLDF+PDFLSLSAHEA+ACHA+PVAVASLS LL FYS GKSMPTTEV VLRTLV I++QD ++S+VLK++KQAH RL ELG D FFGKGEVG RER+W AV WNIG +TGKE+NYEL FF LASEFYG ++DG+++GN VMVCKSLIL V+A IADEKQR TLL++E+KQAIELLDR G IL S S+G QP+ D+ T IEP F FI+TL+A DL++RL+ G Q L LIK+FA+SKSCN YLLQIGL +S GPRSN EVA +ALNTCLS LL S SPDY VA +RKLIS+S ++K DDD+V+GM++QAYRIMVGLKEGEYPIEEGKWLAMTAWNRAAL VR+G + A KWM +G ELAGKV GM TY++CMEDF+A F+ K
Sbjct: 1 MRISEISSPDLRQSLNDPQSHILSQIESSIKDLERHSPEPPSPETLSSD-LRLSLTQLTSLSPFSNSVKLQIWKLSYRLWNSCVDLANAAGVRSSSAAPSGEHAKLRHVSADLLFLAADVVGVPSPAFKSASFFYKTGLIWHDLRNFNLANTCFEKATDLTSRIDIGAVIDSEERKLLLGLNIARSRTAWEISDRNLAITLLNRSKSLLFGCAENYKALANQYLMFGKIVLSKNEVCGVNEGLKLMNEALDLCEKGLRIVKRLDETLALKTLRSKTLRFIAASHLQRDEFESVLKCVRVLRDGGG-GDDHPSLSVLAMKAWLGLGRYGEAEKELKGMVVNKGVPECVWVSAVESYFQAAGVAGAETTKGVFFGLLGRCHVSAGAAIRVVRRVVGDGVIGEGP-VRAKVVAELVSDERVVALFAGEEVVKERTTMHAILWNCAAHHFQSKDYETSAEMFEKSMLYVPFNIENRILRAKGFRVLCLCHLGLSQLDRAEEYINEADKLEPSIACAFLKFKINLQKNDHNGAITQVQVMTTCLDFTPDFLSLSAHEAIACHAIPVAVASLSNLLNFYSKGKSMPTTEVTVLRTLVMILTQDSGNESEVLKFIKQAHKRLLELGPDCFFGKGEVGRRERDWLAVNLWNIGTKTGKERNYELCAEFFRLASEFYGVVVDGEVEGNKVMVCKSLILTVSAMIADEKQRKATLLDNEIKQAIELLDRAGMILKSISSGSQPDGDEITTIEPNFFFIYTLEAYDLHARLNIMGSQQLLLIKNFAASKSCNSNYLLQIGLHASQGPRSNPEVAAFALNTCLSILLASPSPDYQCVALAVRKLISVSAIHKGDADDDDDVHGMFKQAYRIMVGLKEGEYPIEEGKWLAMTAWNRAALPVRLGQTEEARKWMKIGLELAGKVSGMGTYRACMEDFLAGFESK 927
BLAST of XM_017392813.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6P6L4 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1350.88 bits (3495), Expect = 0.000e+0
Identity = 661/932 (70.92%), Postives = 785/932 (84.23%), Query Frame = 0
Match: A0A2R6P6L4 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1350.88 bits (3495), Expect = 0.000e+0
Identity = 661/932 (70.92%), Postives = 785/932 (84.23%), Query Frame = 0
Query: 1 MRIAEISSPEIRSSPGDPQSHLLSQIESSIKLLESQSP----PATLSSDDLRLSLTQLKSLSPFSNSLKLHVWKLSYRLWNACVDLSNASGVK--------LNDEHAKLRQVSADLLFLAADVTEIPSPAFKSASFFYKTGVIWHDLRKFDPASSCFEKATHLISSIDIASISDPEERKLLLNLNIARSRTAWEVADRNIAIALLNRSKTVLFGLAENYCALANQYLIFGKTILAKNEISSVADALKLMNEALDLCEKGLRIVKRSNESLGLKELKSKTLRFMAASHLQTDDFESVLKCVRVLRDGDGDSDNHPSLSVLAMKAWLGVGRFEEAEKELRGMVVNKGIPEAVWVSAVEFYFQAVGTAGAETAKGIFLGLLGRCHVSAGAATRVVHRVLGDGVGSEGSKVRAKVVAELVSDDRVVALFAGD-AAKERTVMHSLLWNCAADHFRFKDYETSAEMFEKSLLYVPHNTENRILRAKGFRVLCLCHLGLSKLKQAEEYIDEAEKLEPNIACAFLKFKIYLQKIEHDKAVTQVQSMPACLDFSPDFLSLSAHEAVACHALPVAVASLSVLLKFYSSGKSMPTTEVVVLRTLVTIISQDPLHDSDVLKYMKQAHARLSELGADSFFGKGEVGTRERNWFAVQSWNIGLRTGKEKNYELSWNFFMLASEFYGTMIDGDMDGNNVMVCKSLILAVTAKIADEKQRNVTLLESEVKQAIELLDRTGKILLSCSAGPQPNIDQTTNIEPYFLFIHTLDACDLYSRLSDTGPQLLRLIKSFASSKSCNPKYLLQIGLISSDGPRSNLEVATYALNTCLSSLLDSQSPDYGSVAQIMRKLISLSGVYKADTDDDEVYGMYRQAYRIMVGLKEGEYPIEEGKWLAMTAWNRAALAVRMGPSSAAMKWMNMGWELAGKVQGMQTYQSCMEDFIASFKDK 919
MRIAEISSP+ R +PQS ++SQIESSIK LE SP P LS D LRL +TQL SL+PFSNS+KL +WKL YRLWNACVD++NA+GV+ ++E+AKLRQ+S+DLLFLAA+V IPSPAFKSASFFYKTG++WHDL KFD A++CFEKAT L S ++I +I+D EERKLLL +N+ARSR+AWE++DRN+AI LLNR+K +LFG AENY ALANQYL+FG+ +L+ NE+ V++ LKLMNEALDLCEKG+RIVKR E++ LK L+SKTLRF+AASHLQ D+FESVLKCVRVLRD G D+HPSLSVLAMKAWLG+GRF EAEKEL+GMVVNKGIPE VWVSAVE YF A G AGAETAKG+FLGLLGRCHVSAG+ATRVV RV+G+G EGS+VRAKVVAE+VSD+RVVALFAG+ A KERT MH++LWNCAADHFR KDYE SAEMFEKS+LYVP+N ENRILRAKGFRVLCLCHLGLS L +A+EYI+EAEKLEPNIACAFLKFKI LQK ++++A+TQV++M CLDF+PDFLSLS+HEA+AC ALPVAVA+LS LL F+SSGK MPTTEV+VLRTLVTI++QD ++S+VLK+MK AH RLSELG+D FFGKGEVG RER+W AV SWNIG RTGKEKNYEL FF LASE YG+++DG+++GNNVMVCKSLIL V+A IADEK+R TLLE+EVKQAI+LLDR GKIL S SAG Q + D+ T+IEP F FI+TL+A DL++R + GPQ L LIK FA+SKSC+ YLLQIGL +S G +SN EVAT+ALN CLSSLL S SPDY VA +RKLI++ ++K +TDDD VY MY+QAYRIMVGLK GEYP+EEGKWLAMTAWNRAAL VR+G +A KWM++G ELAGKV GM TY+SCMEDF+A F+ K
Sbjct: 1 MRIAEISSPDHRQGLNEPQSPVISQIESSIKELERHSPEFPFPENLSGD-LRLGVTQLSSLAPFSNSVKLQIWKLCYRLWNACVDIANAAGVRSSSSSSAMFSEENAKLRQISSDLLFLAAEVAGIPSPAFKSASFFYKTGLVWHDLHKFDLANTCFEKATDLTSRVEIGAITDSEERKLLLGINMARSRSAWELSDRNLAITLLNRAKNILFGCAENYKALANQYLMFGQIVLSNNEVCGVSEGLKLMNEALDLCEKGMRIVKRKEETIALKTLRSKTLRFIAASHLQRDEFESVLKCVRVLRDCGG-GDDHPSLSVLAMKAWLGLGRFGEAEKELKGMVVNKGIPEGVWVSAVEAYFLAAGAAGAETAKGVFLGLLGRCHVSAGSATRVVRRVVGEGSSGEGSRVRAKVVAEVVSDERVVALFAGEEAVKERTTMHAVLWNCAADHFRSKDYEMSAEMFEKSMLYVPYNIENRILRAKGFRVLCLCHLGLSHLDRAQEYINEAEKLEPNIACAFLKFKINLQKNDYNEAITQVKAMTTCLDFTPDFLSLSSHEAIACRALPVAVAALSHLLYFHSSGKPMPTTEVMVLRTLVTILTQDSGNESEVLKHMKGAHKRLSELGSDCFFGKGEVGRRERDWLAVNSWNIGTRTGKEKNYELCAEFFRLASELYGSVVDGEIEGNNVMVCKSLILTVSAMIADEKKRKTTLLETEVKQAIDLLDRAGKILTSISAGSQHDGDEATSIEPNFFFIYTLNAYDLHARFNAIGPQQLHLIKDFAASKSCSSNYLLQIGLHASQGTQSNPEVATFALNACLSSLLTSPSPDYQYVALTVRKLIAVCVIHKGNTDDDVVYRMYKQAYRIMVGLKAGEYPVEEGKWLAMTAWNRAALPVRLGQVESARKWMSIGLELAGKVPGMNTYKSCMEDFLAGFEKK 930
BLAST of XM_017392813.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6A4M223 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079} (Fragment))
HSP 1 Score: 1336.24 bits (3457), Expect = 0.000e+0
Identity = 665/930 (71.51%), Postives = 772/930 (83.01%), Query Frame = 0
Match: A0A6A4M223 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079} (Fragment))
HSP 1 Score: 1336.24 bits (3457), Expect = 0.000e+0
Identity = 665/930 (71.51%), Postives = 772/930 (83.01%), Query Frame = 0
Query: 1 MRIAEISSPEIRSSPGDPQSHLLSQIESSIKLLESQSPPATL---SSDDLRLSLTQLKSLSPFSNSLKLHVWKLSYRLWNACVDLSNASGV------KLNDEHAKLRQVSADLLFLAADVTEIPSPAFKSASFFYKTGVIWHDLRKFDPASSCFEKATHLISSIDIASISDPEERKLLLNLNIARSRTAWEVADRNIAIALLNRSKTVLFGLAENYCALANQYLIFGKTILAKNEISSVADALKLMNEALDLCEKGLRIVKRSNESLGLKELKSKTLRFMAASHLQTDDFESVLKCVRVLRDGD-GDSDNHPSLSVLAMKAWLGVGRFEEAEKELRGMVVNKGIPEAVWVSAVEFYFQAVGTAGAETAKGIFLGLLGRCHVSAGAATRVVHRVLGDGVGSEGSKVRAKVVAELVSDDRVVALFAGD-AAKERTVMHSLLWNCAADHFRFKDYETSAEMFEKSLLYVPHNTENRILRAKGFRVLCLCHLGLSKLKQAEEYIDEAEKLEPNIACAFLKFKIYLQKIEHDKAVTQVQSMPACLDFSPDFLSLSAHEAVACHALPVAVASLSVLLKFYSSGKSMPTTEVVVLRTLVTIISQDPLHDSDVLKYMKQAHARLSELGADSFFGKGEVGTRERNWFAVQSWNIGLRTGKEKNYELSWNFFMLASEFYGTMIDGDMDGNNVMVCKSLILAVTAKIADEKQRNVTLLESEVKQAIELLDRTGKILLSCSAGPQPNIDQTTNIEPYFLFIHTLDACDLYSRLSDTGPQLLRLIKSFASSKSCNPKYLLQIGLISSDGPRSNLEVATYALNTCLSSLLDSQSPDYGSVAQIMRKLISLSGVYKADTDDDEVYGMYRQAYRIMVGLKEGEYPIEEGKWLAMTAWNRAALAVRMGPSSAAMKWMNMGWELAGKVQGMQTYQSCMEDFIASFKDK 919
MRIAEISSP+ R S +P SHLLSQIESSIK LE SP + DLRL LTQL SLSPF NS+KLHVWKLSYRLWN+CVDL+NA+ V K ++HA LRQ+SADLLFLA DV +PSPAFKSASFFYKTG+IWHDL KFD A++CFEKAT L + ID+AS++D EERKLLL LNIARSR+AWEV+DRN+AIALLNR+KTVLFG AE+Y ALANQYL FGK L+ NE V + LKLMNEALDLCEKG+RIVKR +E+L LK ++SKTLRF+AASHLQ D+FESVLKCV+VLR+ G D+HPSLSVLAMKAWLG+GRF EAEKEL+GMVVNKG+PE VWVSAVE YFQA G AGAET KG+FLGLLGRCHVSAGAA RVV RV+GDGV EGS+VRAKVVAE+VSD+RVVALF G+ A KERT MH++LWNCAADHFR KDYETSAEMFEKS+LYVP+N E+R+LRAKGFRVLCLCHLGLS+L QA+EYI EAEKLEPNIA AFLKFKI LQK + D A+TQVQ+M CLDF+PDFLSLSAHEA+AC AL VAV+SLS LL FYSSGK MPTTEV+VLRTL+TI++QD ++S+ L YMK++H RLSELG D FFGKGEVG RER+W AV SWN G R GKE+ Y L +FF LAS+FYG ++DG+ GNNVMVCKSLIL V+A IADEKQR TLL+ EVKQAIELLDR GKIL + S G Q D+ T I+P FLFI+TL+A DL++RL++TG Q L L+K FA+SKSC+P YLLQ+GL +S GPRSN EVAT+ALNTCLS+LL SQSPDY VA +RKLI++ ++K DTDDD VYGMY+QAYRIMVGLK G+YP+EEGKWLAMTAWNRAAL VR+G AA KWM++G +LAGKV GM TY+ CMEDF+ F+ K
Sbjct: 1 MRIAEISSPDHRHSLNEPHSHLLSQIESSIKDLERHSPESPFPEPLLTDLRLRLTQLTSLSPFPNSVKLHVWKLSYRLWNSCVDLANAAAVRPSSSAKFTEQHANLRQISADLLFLANDVVGVPSPAFKSASFFYKTGLIWHDLNKFDLANNCFEKATDLTARIDVASVTDNEERKLLLGLNIARSRSAWEVSDRNLAIALLNRAKTVLFGCAESYKALANQYLAFGKIALSSNESCGVNEGLKLMNEALDLCEKGMRIVKRQDETLALKNMRSKTLRFIAASHLQRDEFESVLKCVKVLRESSSGGGDDHPSLSVLAMKAWLGLGRFGEAEKELKGMVVNKGVPEGVWVSAVESYFQAAGAAGAETVKGLFLGLLGRCHVSAGAAIRVVRRVVGDGVTVEGSRVRAKVVAEVVSDERVVALFVGEEAVKERTTMHAVLWNCAADHFRSKDYETSAEMFEKSMLYVPYNIESRVLRAKGFRVLCLCHLGLSQLDQAQEYITEAEKLEPNIASAFLKFKINLQKNDCDGAITQVQAMTTCLDFTPDFLSLSAHEAIACRALRVAVSSLSNLLNFYSSGKPMPTTEVMVLRTLITILTQDSGNESETLVYMKRSHKRLSELGPDFFFGKGEVGRRERDWLAVNSWNTGTRVGKEEKYGLCADFFRLASDFYGVVVDGEGQGNNVMVCKSLILTVSAMIADEKQRKATLLDKEVKQAIELLDRAGKILTTISVGSQAEGDEITTIDPNFLFIYTLNAYDLHTRLNETGSQQLLLVKQFAASKSCSPNYLLQLGLHASQGPRSNPEVATFALNTCLSALLASQSPDYQCVALTIRKLIAVCAIHKGDTDDDVVYGMYKQAYRIMVGLKAGDYPLEEGKWLAMTAWNRAALPVRLGQVEAARKWMSIGLDLAGKVPGMDTYKLCMEDFLDGFEKK 930
BLAST of XM_017392813.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834G0V1 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7120696.1}))
HSP 1 Score: 1326.23 bits (3431), Expect = 0.000e+0
Identity = 657/930 (70.65%), Postives = 771/930 (82.90%), Query Frame = 0
Match: A0A834G0V1 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7120696.1}))
HSP 1 Score: 1326.23 bits (3431), Expect = 0.000e+0
Identity = 657/930 (70.65%), Postives = 771/930 (82.90%), Query Frame = 0
Query: 1 MRIAEISSPEIRSSPGDPQSHLLSQIESSIKLLESQSPPATL---SSDDLRLSLTQLKSLSPFSNSLKLHVWKLSYRLWNACVDLSNASGV------KLNDEHAKLRQVSADLLFLAADVTEIPSPAFKSASFFYKTGVIWHDLRKFDPASSCFEKATHLISSIDIASISDPEERKLLLNLNIARSRTAWEVADRNIAIALLNRSKTVLFGLAENYCALANQYLIFGKTILAKNEISSVADALKLMNEALDLCEKGLRIVKRSNESLGLKELKSKTLRFMAASHLQTDDFESVLKCVRVLRDGD-GDSDNHPSLSVLAMKAWLGVGRFEEAEKELRGMVVNKGIPEAVWVSAVEFYFQAVGTAGAETAKGIFLGLLGRCHVSAGAATRVVHRVLGDGVGSEGSKVRAKVVAELVSDDRVVALFAGD-AAKERTVMHSLLWNCAADHFRFKDYETSAEMFEKSLLYVPHNTENRILRAKGFRVLCLCHLGLSKLKQAEEYIDEAEKLEPNIACAFLKFKIYLQKIEHDKAVTQVQSMPACLDFSPDFLSLSAHEAVACHALPVAVASLSVLLKFYSSGKSMPTTEVVVLRTLVTIISQDPLHDSDVLKYMKQAHARLSELGADSFFGKGEVGTRERNWFAVQSWNIGLRTGKEKNYELSWNFFMLASEFYGTMIDGDMDGNNVMVCKSLILAVTAKIADEKQRNVTLLESEVKQAIELLDRTGKILLSCSAGPQPNIDQTTNIEPYFLFIHTLDACDLYSRLSDTGPQLLRLIKSFASSKSCNPKYLLQIGLISSDGPRSNLEVATYALNTCLSSLLDSQSPDYGSVAQIMRKLISLSGVYKADTDDDEVYGMYRQAYRIMVGLKEGEYPIEEGKWLAMTAWNRAALAVRMGPSSAAMKWMNMGWELAGKVQGMQTYQSCMEDFIASFKDK 919
MRIAEISSP+ R S +P SHLLSQIESSIK LE SP + DLRL LTQL SLSPF NS+KLHVWKLSYRLWN+CVDL+NA+ V K ++HA LRQ+SADLLFLA DV +PSPA KSASFFYKTG+IWHDL KFD A++CFEKAT L + ID+AS++D EERKLLL LNIARSR+AWEV+DRN+AIALLNR+KTVLFG AE+Y ALANQYL FGK +L+ E V + LKLMNEALDLCEKG+RIVKR +E++ LK ++SKTLRF+AASHLQ D+FESVLKCV+VLR+ G D+HPSLSVLAMKAWLG+GRF EAEKEL+GMVVNKG+PE VWVSAVE YFQA G AGAET KG+FLGLLGRCHVSAGAA RVV RV+GDGV EGS+VRAKVVAE+VSD+RVVALF G+ A K+RT MH++LWNCAAD+FR KDYETSAEMFEKS+LYVP+N E+R+LRAKGFRVLCLCHLGLS+L QA+EYI EAEKLEPNIA AFLKFKI LQK + D A++QVQ+M CLDF+PDFLSLSAHEA+AC AL VAV+SLS LL FYSSGK MPTTEV+VLRT++TI++QD ++S+ L YM ++H RLSELG D FFGKGEVG RER+W AV SWN G R GKE+ Y L +FF LAS+FYG ++DG++ GNNVMVCKSLIL V+A IADEKQR TLL+ EVK AIELLDR GKIL + S G Q D+ T I+P FLFI+TL+A DL++RL++TG Q L L+K FA+SKSC+P YLLQ+GL +S GPRSN EVAT+ALNTCLS+LL SQSPDY VA +RKLI++ ++K DTDDD VYGMY+QAYRIMVGLK G+YP+EEGKWLAMTAWNRAAL VR+G AA KWM++G +LAGKV GM TY+SCMEDF+ F+ K
Sbjct: 1 MRIAEISSPDHRHSLNEPHSHLLSQIESSIKDLERHSPESPFPEPLLTDLRLRLTQLTSLSPFPNSVKLHVWKLSYRLWNSCVDLANAAAVRPSSSAKFTEQHANLRQISADLLFLANDVVGVPSPAIKSASFFYKTGIIWHDLNKFDLANNCFEKATDLTARIDVASVTDNEERKLLLGLNIARSRSAWEVSDRNLAIALLNRAKTVLFGCAESYKALANQYLAFGKIVLSSKESCGVNEGLKLMNEALDLCEKGMRIVKRKDETIALKNMRSKTLRFIAASHLQRDEFESVLKCVKVLRESSSGGGDDHPSLSVLAMKAWLGLGRFGEAEKELKGMVVNKGVPEGVWVSAVESYFQAAGAAGAETVKGVFLGLLGRCHVSAGAAIRVVRRVVGDGVTVEGSRVRAKVVAEVVSDERVVALFVGEEAVKQRTTMHAVLWNCAADYFRSKDYETSAEMFEKSMLYVPYNIESRVLRAKGFRVLCLCHLGLSQLDQAQEYITEAEKLEPNIASAFLKFKINLQKNDCDGAISQVQAMTTCLDFTPDFLSLSAHEAIACRALRVAVSSLSNLLNFYSSGKPMPTTEVMVLRTIITILAQDSGNESETLVYMARSHKRLSELGPDFFFGKGEVGRRERDWLAVNSWNTGTRVGKEEKYGLCADFFRLASDFYGVVVDGEVQGNNVMVCKSLILTVSAMIADEKQRKATLLDKEVKHAIELLDRAGKILTTISVGSQAEGDEITTIDPNFLFIYTLNAYDLHTRLNETGSQQLLLVKQFAASKSCSPNYLLQLGLHASQGPRSNPEVATFALNTCLSALLASQSPDYQCVALTIRKLIAVCAIHKGDTDDDVVYGMYKQAYRIMVGLKAGDYPLEEGKWLAMTAWNRAALPVRLGQVEAARKWMSIGLDLAGKVPGMDTYKSCMEDFLDGFEKK 930
BLAST of XM_017392813.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6I9TIF7 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1309.28 bits (3387), Expect = 0.000e+0
Identity = 632/930 (67.96%), Postives = 773/930 (83.12%), Query Frame = 0
Match: A0A6I9TIF7 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1309.28 bits (3387), Expect = 0.000e+0
Identity = 632/930 (67.96%), Postives = 773/930 (83.12%), Query Frame = 0
Query: 1 MRIAEISS-PEIRSSPGDP----QSHLLSQIESSIKLLESQSP----PATLSSDDLRLSLTQLKSLSPFSNSLKLHVWKLSYRLWNACVDLSNASGVKLNDEHAKLRQVSADLLFLAADVTEIPSPAFKSASFFYKTGVIWHDLRKFDPASSCFEKATHLISSIDIASISDPEERKLLLNLNIARSRTAWEVADRNIAIALLNRSKTVLFGLAENYCALANQYLIFGKTILAKNEISSVADALKLMNEALDLCEKGLRIVKRSNESLGLKELKSKTLRFMAASHLQTDDFESVLKCVRVLRDGDGDSDNHPSLSVLAMKAWLGVGRFEEAEKELRGMVVNKGIPEAVWVSAVEFYFQAVGTAGAETAKGIFLGLLGRCHVSAGAATRVVHRVLGDGVG-SEGSKVRAKVVAELVSDDRVVALFAGD-AAKERTVMHSLLWNCAADHFRFKDYETSAEMFEKSLLYVPHNTENRILRAKGFRVLCLCHLGLSKLKQAEEYIDEAEKLEPNIACAFLKFKIYLQKIEHDKAVTQVQSMPACLDFSPDFLSLSAHEAVACHALPVAVASLSVLLKFYSSGKSMPTTEVVVLRTLVTIISQDPLHDSDVLKYMKQAHARLSELGADSFFGKGEVGTRERNWFAVQSWNIGLRTGKEKNYELSWNFFMLASEFYGTMIDGDMDGNNVMVCKSLILAVTAKIADEKQRNVTLLESEVKQAIELLDRTGKILLSCSAGPQPNIDQTTNIEPYFLFIHTLDACDLYSRLSDTGPQLLRLIKSFASSKSCNPKYLLQIGLISSDGPRSNLEVATYALNTCLSSLLDSQSPDYGSVAQIMRKLISLSGVYKADTDDDEVYGMYRQAYRIMVGLKEGEYPIEEGKWLAMTAWNRAALAVRMGPSSAAMKWMNMGWELAGKVQGMQTYQSCMEDFIASFKDK 919
MRIAEISS P+ R + P S +L+QIE++IK LE P P + SS+ LRL+L QL L+PF NS+KL VWKLSYRLWN CVDLSNAS K+++EHAKLRQV+ADLLF +DV IPSPAFK+A FFYKTG++W+DLRKFD A++CFEKAT L+S+I+I+S+SD ++RKLLL+LN+ARSR AW+V DRN+AIALLNRSK VLFG++ NY ALANQYL FGKT+L+ +E+S+V +ALKL+N+AL+LCEKGLR+VKR+ E+L LKEL+ KTLRF+AA+HLQ D+FESVLKCV++LR+ D+HPSLSV+AMKAWLG+GR+ EAEKELRGMV+NKGIPE VWVSAVE YFQA G AGAET KG+FLGLL RCHVSAGAA RVV+R++G+G+ EG KVRA VV ELV+D+RVVA+F + AAKERT MH+LLWNCA +HFR K+Y SAEMFEKS+LYVPH ENRILRAKG+RVLCLC+LGL +L +AEEYI+EAEKLEPNIA +FLKFKI+LQK +HD+A+ Q+++MP+CLDF+ DF+SLSAHEAVAC LPVA ASLS LL FYSSGKSMPT EVVV RTLVTI+SQDP +++DVL+YMKQAH+RLSE+G D FFGK EVG RE+NWFA +WN G++TG+EKNYELS FF LASEFYG + D + +GNNVMVCKS+I+AV+A IA EK RN TLLE+EV+QAI+ L R GK+L+S SA + DQTT IEP F F++T + DLYSRLSD Q L L+K+FASSKSCNPK+LLQIGL +S GPRSN EV +ALNTCL+SLL S SPDY +VA ++RKLIS+ +YK DT+DD + +Y+QAYRIMVGL+EGEYP+EE KWLAMTAWNRAAL V+MG +A KWMN+G ELA KV+GM TY+SCMED++ASF+ K
Sbjct: 1 MRIAEISSTPDRRRASPVPAVSNHSTVLTQIETTIKSLERHLPLHPLPDSFSSE-LRLALVQLTQLAPFPNSVKLQVWKLSYRLWNTCVDLSNASTAKISEEHAKLRQVAADLLFQTSDVAGIPSPAFKAALFFYKTGLVWYDLRKFDLANNCFEKATDLVSNIEISSVSDEDDRKLLLDLNLARSRAAWDVLDRNLAIALLNRSKNVLFGVSRNYNALANQYLTFGKTLLSTSEVSAVNEALKLINDALELCEKGLRVVKRTEETLNLKELRLKTLRFIAAAHLQKDEFESVLKCVKILREVGSGGDHHPSLSVMAMKAWLGLGRYGEAEKELRGMVLNKGIPEGVWVSAVESYFQAAGAAGAETIKGVFLGLLERCHVSAGAAIRVVNRIIGNGLSHGEGMKVRANVVTELVTDERVVAVFDREGAAKERTTMHALLWNCATEHFRSKEYLLSAEMFEKSMLYVPHGIENRILRAKGYRVLCLCYLGLLQLDRAEEYINEAEKLEPNIASSFLKFKIFLQKNDHDRAIAQMKAMPSCLDFTTDFISLSAHEAVACRCLPVATASLSQLLNFYSSGKSMPTNEVVVFRTLVTILSQDPANETDVLRYMKQAHSRLSEIGPDLFFGKCEVGRREKNWFAGNAWNSGVKTGQEKNYELSAEFFKLASEFYGVVGDEETEGNNVMVCKSIIMAVSAIIAGEKHRNCTLLETEVRQAIDFLGRAGKMLMSSSASIRQTDDQTTAIEPNFFFMYTWSSFDLYSRLSDMSAQQLSLVKAFASSKSCNPKHLLQIGLEASQGPRSNPEVCAFALNTCLASLLASPSPDYQTVALVLRKLISIRTIYKGDTEDDSITEIYKQAYRIMVGLREGEYPVEEAKWLAMTAWNRAALPVKMGQIESAKKWMNIGMELATKVRGMHTYKSCMEDYLASFEKK 929
BLAST of XM_017392813.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9HJK2 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1288.86 bits (3334), Expect = 0.000e+0
Identity = 631/934 (67.56%), Postives = 763/934 (81.69%), Query Frame = 0
Match: A0A2G9HJK2 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1288.86 bits (3334), Expect = 0.000e+0
Identity = 631/934 (67.56%), Postives = 763/934 (81.69%), Query Frame = 0
Query: 1 MRIAEI-SSPEIR---------SSPGDPQSHLLSQIESSIKLLESQSPPATLS---SDDLRLSLTQLKSLSPFSNSLKLHVWKLSYRLWNACVDLSNASGVKLNDEHAKLRQVSADLLFLAADVTEIPSPAFKSASFFYKTGVIWHDLRKFDPASSCFEKATHLISSIDIASISDPEERKLLLNLNIARSRTAWEVADRNIAIALLNRSKTVLFGLAENYCALANQYLIFGKTILAKNEISSVADALKLMNEALDLCEKGLRIVKRSNESLGLKELKSKTLRFMAASHLQTDDFESVLKCVRVLRDGDGDSDNHPSLSVLAMKAWLGVGRFEEAEKELRGMVVNKGIPEAVWVSAVEFYFQAVGTAGAETAKGIFLGLLGRCHVSAGAATRVVHRVLGDGVGS-EGSKVRAKVVAELVSDDRVVALFAGD-AAKERTVMHSLLWNCAADHFRFKDYETSAEMFEKSLLYVPHNTENRILRAKGFRVLCLCHLGLSKLKQAEEYIDEAEKLEPNIACAFLKFKIYLQKIEHDKAVTQVQSMPACLDFSPDFLSLSAHEAVACHALPVAVASLSVLLKFYSSGKSMPTTEVVVLRTLVTIISQDPLHDSDVLKYMKQAHARLSELGADSFFGKGEVGTRERNWFAVQSWNIGLRTGKEKNYELSWNFFMLASEFYGTMIDGDMDGNNVMVCKSLILAVTAKIADEKQRNVTLLESEVKQAIELLDRTGKILLSCSAGPQPNIDQTTNIEPYFLFIHTLDACDLYSRLSDTGPQLLRLIKSFASSKSCNPKYLLQIGLISSDGPRSNLEVATYALNTCLSSLLDSQSPDYGSVAQIMRKLISLSGVYKADTDDDEVYGMYRQAYRIMVGLKEGEYPIEEGKWLAMTAWNRAALAVRMGPSSAAMKWMNMGWELAGKVQGMQTYQSCMEDFIASFKDK 919
MRIAEI S+P+ R S+ S +LSQIES+IK LE P L+ S DL+L++ QL L+PF NS+KL VWKLSYR+WN+CVDLSNAS K+++EHAKLRQV+A+LLFL DV IP+P FK+A FFYKTG+IW+DLRKFD A+SCFEKAT L+S+I+I+SISD +ERKLLL+LNIARSR AWEV DRN+A ALLNRSK VLFG++ NY ALANQYL FGKT+L+++E+S V +ALKLMN+AL+LCEKGLR+VKR+ E+L LKEL+ KTLRF+AA+HLQ D+FESVLKCV+VLR+ G D+HPSLSVLAMKAWLG+ R+EEAEKELRGMV+N+GIPE VWVSAVE YFQA G AGAET KG+FLGLL RC VSAGAA +VV+RV+G+G+ S EG KVRA VV ++VSD+RVVALF G+ AAKERT MH+LLWNCA +HFR KDY SAEMFEK++LYVPH ENR LRAKG+RVLCLC+LGL +L +AEEY++EAEKLEPNIA AFLKFKI+LQK +H A+ Q+Q+MP+CLDF+ DF+SLSAHEAVAC +LPVA ASL LL FYS GK MPT EVVV RTLVTI+SQDP +D++VLK+MKQA+AR SE+G D FFGK EVG RE+NWFA +WN G+RTG+EKNY+LS FF LASEFYG DGD +GNN+MVCKS++L+V+A IA E+ RN TL E++VKQAIELL R GKIL S + N DQ +IEP F ++T A DLYSRLSDTGPQ L L+K++A+SKSCNPK+LLQIG +S GPRSN EVAT+A NT L++LL S SPDY +VA I+RKLIS+S ++K D DDD + MY+QAYRIMVGL+EGEYPIEE KWLAMTAWNRAAL V+MG +A KWMN+G ELA KV GM TY+SCMED++A F+ K
Sbjct: 1 MRIAEIPSTPDHRRASVETAVVSTADSKLSTVLSQIESAIKSLERHPPAHPLADSFSSDLQLAVAQLNQLAPFPNSIKLLVWKLSYRIWNSCVDLSNASTAKISEEHAKLRQVAAELLFLTVDVVGIPTPWFKAALFFYKTGLIWYDLRKFDMANSCFEKATDLVSNIEISSISDDDERKLLLDLNIARSRAAWEVLDRNLAFALLNRSKHVLFGVSRNYNALANQYLTFGKTLLSRSEVSVVNEALKLMNDALELCEKGLRVVKRTEETLNLKELRLKTLRFIAAAHLQNDEFESVLKCVKVLREVGGGGDHHPSLSVLAMKAWLGLARYEEAEKELRGMVINRGIPEGVWVSAVESYFQAAGAAGAETVKGVFLGLLERCCVSAGAAIKVVNRVVGNGLSSGEGMKVRANVVNDIVSDERVVALFDGEGAAKERTTMHALLWNCATEHFRSKDYLLSAEMFEKAMLYVPHGIENRDLRAKGYRVLCLCYLGLLQLDRAEEYVNEAEKLEPNIASAFLKFKIFLQKNDHKSAIAQMQAMPSCLDFTTDFISLSAHEAVACRSLPVATASLCQLLNFYSLGKQMPTNEVVVFRTLVTILSQDPANDTEVLKHMKQANARQSEMGPDLFFGKYEVGKREKNWFAGNAWNFGVRTGQEKNYDLSAEFFKLASEFYGVAGDGDTEGNNLMVCKSIVLSVSAIIAGERHRNGTLQETQVKQAIELLGRAGKILTPNSVSIRKN-DQVMSIEPNFFLLYTWSAFDLYSRLSDTGPQQLILVKTYATSKSCNPKHLLQIGFDASQGPRSNPEVATFAFNTSLAALLASPSPDYQTVAMILRKLISISTIHKGDPDDDSIIEMYKQAYRIMVGLREGEYPIEEAKWLAMTAWNRAALPVKMGQIDSAKKWMNIGLELAMKVPGMHTYRSCMEDYLAEFEKK 933
BLAST of XM_017392813.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3YLK9 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1280.77 bits (3313), Expect = 0.000e+0
Identity = 627/927 (67.64%), Postives = 759/927 (81.88%), Query Frame = 0
Match: A0A1S3YLK9 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1280.77 bits (3313), Expect = 0.000e+0
Identity = 627/927 (67.64%), Postives = 759/927 (81.88%), Query Frame = 0
Query: 1 MRIAEISSPEIRSSPGDPQSHLLSQIESSIKLLESQSPPATLS---SDDLRLSLTQLKSLSPFSNSLKLHVWKLSYRLWNACVDLSNA-----SGVKLNDEHAKLRQVSADLLFLAADVTEIPSPAFKSASFFYKTGVIWHDLRKFDPASSCFEKATHLISSIDIASISDPEERKLLLNLNIARSRTAWEVADRNIAIALLNRSKTVLFGLAENYCALANQYLIFGKTILAKNEISSVADALKLMNEALDLCEKGLRIVKRSNESLGLKELKSKTLRFMAASHLQTDDFESVLKCVRVLRDGDGDSDNHPSLSVLAMKAWLGVGRFEEAEKELRGMVVNKGIPEAVWVSAVEFYFQAVGTAGAETAKGIFLGLLGRCHVSAGAATRVVHRVLGDGVGS-EGSKVRAKVVAELVSDDRVVALFAG-DAAKERTVMHSLLWNCAADHFRFKDYETSAEMFEKSLLYVPHNTENRILRAKGFRVLCLCHLGLSKLKQAEEYIDEAEKLEPNIACAFLKFKIYLQKIEHDKAVTQVQSMPACLDFSPDFLSLSAHEAVACHALPVAVASLSVLLKFYSSGKSMPTTEVVVLRTLVTIISQDPLHDSDVLKYMKQAHARLSELGADSFFGKGEVGTRERNWFAVQSWNIGLRTGKEKNYELSWNFFMLASEFYGTMIDGDMDGNNVMVCKSLILAVTAKIADEKQRNVTLLESEVKQAIELLDRTGKILLSCSAGPQPNIDQTTN-IEPYFLFIHTLDACDLYSRLSDTGPQLLRLIKSFASSKSCNPKYLLQIGLISSDGPRSNLEVATYALNTCLSSLLDSQSPDYGSVAQIMRKLISLSGVYKADTDDDEVYGMYRQAYRIMVGLKEGEYPIEEGKWLAMTAWNRAALAVRMGPSSAAMKWMNMGWELAGKVQGMQTYQSCMEDFIASF 916
M+I EISSPE+R D S SQIESSIK +E P L S DLR S++QL LSP+ NS+KLH+WKLSYRLWNACVDLSNA SG K+++EHAKLRQVSADLLFLA+DV+ IPSPAFKSASFFYKTG+IWHDLRKF+ A+ CFEKAT L+S ++I++IS+ EE++ LL+LNIARSRTAWEV+DRN+A+ALL+RSK+VLF +AENY ALANQYLIFGK IL+KNE+S V +AL+LMN+AL+LCE+GL +VKR+ ++L LKEL+SKTLRF+AA HLQ D+FESVLKCV+VLRDG+ D HPSLSVLAMKAWLG+ RF EAEKELRGMVV+KGIPE VWVSAVE YFQ VG AGA T KG+FLGLLGRCHVSA AA RVV +VLGD G+ E +++RAKVV++LVSDDR++ L +G D ++ERT MH+LLWNCAA+HFR KD++TSAE+FEKSLLY P + E+R LRAKGFRVLCLC++GLS+L +A+EYI+EAEKLEPNIA FLKFKIYLQK E D +++Q+Q+MP+ LDF+ +FLSL+AHEA+ C PV VASLS+LL FY +GK MPTTEVVV RTLVT +SQ P +DSD+LK MK+AH RLSELGAD FFGKGE+G RERNWF+V +WN G++TG+E + LS FF LASEFYG ID + +GN+VMVCKSLI+ V+A I+DE+QR TLLE+EVK+AI LLDR GK+L+S S D+ IEP LF++T A DLYSR+ DTG Q L LIK FA+SKSCNPKYLLQIG+ +S GPRSN EVAT+AL+TCLS+LL S SPDY SVA I+RKL+SL ++ AD++DD Y+QAYRIMVGLKEGEYP+EE KWLAMTAWNRAA+ VRMG A +WM+MG ELA KV GMQTY+SCMEDF+A F
Sbjct: 1 MKIDEISSPELRGGQNDLHSQPCSQIESSIKDIEKHVPGTALPDSFSTDLRRSISQLNFLSPYPNSIKLHIWKLSYRLWNACVDLSNAAGFKTSGHKIDEEHAKLRQVSADLLFLASDVSGIPSPAFKSASFFYKTGLIWHDLRKFEHANYCFEKATDLLSKVEISTISENEEKRFLLDLNIARSRTAWEVSDRNLAVALLSRSKSVLFAVAENYKALANQYLIFGKAILSKNEVSGVNEALRLMNDALELCERGLTVVKRTEDTLALKELRSKTLRFLAAVHLQRDEFESVLKCVKVLRDGE--KDQHPSLSVLAMKAWLGLRRFGEAEKELRGMVVDKGIPEGVWVSAVESYFQVVGAAGAATVKGVFLGLLGRCHVSASAAIRVVSKVLGDPAGAGEETRLRAKVVSDLVSDDRILTLLSGEDTSRERTAMHALLWNCAAEHFRSKDFQTSAEIFEKSLLYNPSDIESRNLRAKGFRVLCLCYMGLSQLDRAQEYINEAEKLEPNIASTFLKFKIYLQKNECDGSISQLQAMPSRLDFTTEFLSLAAHEAIVCRCHPVTVASLSLLLNFYPTGKQMPTTEVVVFRTLVTTLSQGPQNDSDILKQMKRAHTRLSELGADKFFGKGEIGRRERNWFSVNAWNSGVKTGQEDQHALSAEFFRLASEFYGASIDEEKEGNHVMVCKSLIMTVSAIISDERQRKSTLLENEVKEAISLLDRAGKMLMSSST----EYDKLEAIIEPNLLFMYTWCAFDLYSRIDDTGSQQLLLIKRFANSKSCNPKYLLQIGIDASQGPRSNHEVATFALSTCLSTLLASSSPDYESVALILRKLVSLRSIHGADSNDDATMETYKQAYRIMVGLKEGEYPVEEAKWLAMTAWNRAAIPVRMGNMDEAKRWMSMGLELAKKVPGMQTYRSCMEDFVAGF 921
BLAST of XM_017392813.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A022S442 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1276.92 bits (3303), Expect = 0.000e+0
Identity = 633/930 (68.06%), Postives = 756/930 (81.29%), Query Frame = 0
Match: A0A022S442 (Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA00024079})
HSP 1 Score: 1276.92 bits (3303), Expect = 0.000e+0
Identity = 633/930 (68.06%), Postives = 756/930 (81.29%), Query Frame = 0
Query: 1 MRIAEISS-PEIRSSPGDPQSH---LLSQIESSIKLLESQSP----PATLSSDDLRLSLTQLKSLSPFSNSLKLHVWKLSYRLWNACVDLSNASGVKLNDEHAKLRQVSADLLFLAADVTEIPSPAFKSASFFYKTGVIWHDLRKFDPASSCFEKATHLISSIDIASISDPEERKLLLNLNIARSRTAWEVADRNIAIALLNRSKTVLFGLAENYCALANQYLIFGKTILAKNEISSVADALKLMNEALDLCEKGLRIVKRSNESLGLKELKSKTLRFMAASHLQTDDFESVLKCVRVLRDGDGDSDNHPSLSVLAMKAWLGVGRFEEAEKELRGMVVNKGIPEAVWVSAVEFYFQAVGTAGAETAKGIFLGLLGRCHVSAGAATRVVHRVLGDGVGS-EGSKVRAKVVAELVSDDRVVALFAGD-AAKERTVMHSLLWNCAADHFRFKDYETSAEMFEKSLLYVPHNTENRILRAKGFRVLCLCHLGLSKLKQAEEYIDEAEKLEPNIACAFLKFKIYLQKIEHDKAVTQVQSMPACLDFSPDFLSLSAHEAVACHALPVAVASLSVLLKFYSSGKSMPTTEVVVLRTLVTIISQDPLHDSDVLKYMKQAHARLSELGADSFFGKGEVGTRERNWFAVQSWNIGLRTGKEKNYELSWNFFMLASEFYGTMIDGDMD-GNNVMVCKSLILAVTAKIADEKQRNVTLLESEVKQAIELLDRTGKILLSCSAGPQPNIDQTTNIEPYFLFIHTLDACDLYSRLSDTGPQLLRLIKSFASSKSCNPKYLLQIGLISSDGPRSNLEVATYALNTCLSSLLDSQSPDYGSVAQIMRKLISLSGVYKADTDDDEVYGMYRQAYRIMVGLKEGEYPIEEGKWLAMTAWNRAALAVRMGPSSAAMKWMNMGWELAGKVQGMQTYQSCMEDFIASFKDK 919
MRIAEISS PE R + +S LSQIES+IK LE SP P T SS+ LR +L QL L+PF NS KL VWKLSYRLWN CVDL+NAS K+++EHAKLRQV+A +LFL ADV IPSPAFKSA FFYKTG+IW+DL+ FD A++CFEKAT L+S I+I S+SD +ERKLLL+LNI+RS+ AWEV+DRN+AI LLNRSK VLFG++ NY ALA QYL FGKT+L+ +E S+V +ALKLMNEAL+LCEKGLR+VKR+ E+L LKEL+ KTLRF+AA+HLQ+D+FESVLKCV+VLRD D+HPSLSVLAMKAWLG+GR+ EAEKELRGMV+NKGIPE VWVSAVE YF A G AGAET KG+FLGLL RCHVSAGAA RVV+R++G G+ + EG KVRA VV ELVSD+RVV LF G+ AAKERT MH+LLWNCA ++FR KDY SA+MFEKS+LYVPH ENRILRAKG+RVLCLC+LGL +L +AEEYI+EAEKLEPNIA +FLKFKI+LQK +H A++Q+Q+MP+CLDF+ DF+SL+AHEAVAC +L VA ASLS LL FYSSGKSMPT EVVV RTLVTI+SQD +D DVLK MK+AH R SE+GAD FFGK EVG RE+NWFA +WN G+RTG+EK Y+LS FF LASEFYG + +G+++ N+VMVCKS+IL+V+A IADEKQ T+LE+EV+QAIELL R GKIL + SA + N DQ T IEP F FI+T A DLYSRLSDT Q L L+K+FA SKSCNP YLLQIGL +S GPRSN EVAT+ALN L++LL S SPDY SVA I+RKLIS+ +YK D D+D + MY+QAYRIMVGLKEG+YPIEE KWLA TAWNRAAL V+MG +A KWM++G ELA KV GM TY+SCME+++A F+ K
Sbjct: 1 MRIAEISSTPEHRRASAAAESDHSTALSQIESTIKSLERHSPAHPLPDTFSSE-LRQALAQLSQLAPFPNSTKLLVWKLSYRLWNTCVDLANASAAKIDEEHAKLRQVAAQMLFLTADVVGIPSPAFKSALFFYKTGLIWYDLKTFDSANNCFEKATDLVSDIEINSVSDDDERKLLLDLNISRSKAAWEVSDRNLAINLLNRSKNVLFGVSRNYNALATQYLTFGKTMLSASESSAVNEALKLMNEALELCEKGLRVVKRTEETLNLKELRLKTLRFIAAAHLQSDEFESVLKCVKVLRDVGIGGDHHPSLSVLAMKAWLGLGRYGEAEKELRGMVMNKGIPEGVWVSAVESYFVAAGAAGAETVKGVFLGLLERCHVSAGAAIRVVNRLVGSGLSNGEGMKVRASVVTELVSDERVVMLFDGEGAAKERTTMHALLWNCATEYFRSKDYPLSADMFEKSMLYVPHGIENRILRAKGYRVLCLCYLGLLQLDRAEEYINEAEKLEPNIASSFLKFKIFLQKNDHSSAISQMQAMPSCLDFTTDFISLAAHEAVACRSLLVATASLSQLLNFYSSGKSMPTNEVVVFRTLVTILSQDSANDDDVLKNMKKAHHRQSEIGADLFFGKSEVGRREKNWFAGNAWNFGVRTGQEKKYDLSAEFFKLASEFYGVVSEGEIEVDNDVMVCKSIILSVSAIIADEKQGKSTMLETEVRQAIELLSRAGKILTTSSANIRKNDDQVTTIEPNFFFIYTWTAYDLYSRLSDTDAQQLLLVKNFAGSKSCNPNYLLQIGLDASQGPRSNPEVATFALNASLTALLSSPSPDYQSVALILRKLISIGTLYKGDKDEDSIIEMYKQAYRIMVGLKEGDYPIEEAKWLATTAWNRAALPVKMGRFESAKKWMDIGLELAVKVPGMHTYRSCMEEYVAGFEKK 929
| Match Name | Stats | Description |
|---|---|---|
| A0A5J5BP66 | E-Value: 0.000e+0, PID: 72.74 | Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA0002407... [more] |
| A0A7J7FPZ4 | E-Value: 0.000e+0, PID: 73.23 | Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA0002407... [more] |
| A0A4S4D330 | E-Value: 0.000e+0, PID: 73.12 | Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA0002407... [more] |
| A0A2R6P6L4 | E-Value: 0.000e+0, PID: 70.92 | Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA0002407... [more] |
| A0A6A4M223 | E-Value: 0.000e+0, PID: 71.51 | Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA0002407... [more] |
| A0A834G0V1 | E-Value: 0.000e+0, PID: 70.65 | (Uncharacterized protein {ECO:0000313|EMBL:KAF7120... [more] |
| A0A6I9TIF7 | E-Value: 0.000e+0, PID: 67.96 | Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA0002407... [more] |
| A0A2G9HJK2 | E-Value: 0.000e+0, PID: 67.56 | Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA0002407... [more] |
| A0A1S3YLK9 | E-Value: 0.000e+0, PID: 67.64 | Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA0002407... [more] |
| A0A022S442 | E-Value: 0.000e+0, PID: 68.06 | Protein ZIP4 homolog {ECO:0000256|ARBA:ARBA0002407... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |