XM_017384856.1

Resource Type: 
Polypeptide
Name: 
XM_017384856.1
Identifier: 
XM_017384856.1-protein
Sequence: 
MALIKILPFVIIIILIIYEDRISTPSCKLVPSSNPPENISEEIGQNSSED
DLKVMIVANLLLLGSKAGYFNFFFRDYYLSKFFKKSFQVLKPDMLLVLGD
VSARGAELTRSNWSSVIQQFHRVLGPFLELPYHVLLGDRDIGGCSDLNSG
SVSWISSNFPGLDSSGCSAFGIGNISFVSLNSVALLCGDNSLRFGVEKTV
ETESTELQMETEQTEQPVQVSKDIRLEDFIWRENALSSGSGPVLLLHMPL
HLRANRFQESNMYDKKAEYKHQDATRKGSSDLAGLGPYELWHTLPLNATE
YIFQALKPRIIFSAHTHKFCDRTHYDGTREITVPAMSWEAVDDPGFVFAS
FKSNRKSITVSHCLLAKESSVIFTCTSILVLSILSLLVTHTPQNNIIS
Sequence Length: 
398
Sequence Checksum: 
1d7e42fc025957314462d0f9f0e10219
View location in JBrowse: 
DCARv2_Chr3:477552..479935+
Organism: 
Daucus carota subspecies sativus
Relationship: 
There is 1 relationship.
Relationships
The polypeptide, XM_017384856.1, derives from mRNA, XM_017384856.1.
Blast Results: 
The following BLAST results are available for this feature:
BLAST of XM_017384856.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
[Close]
BLAST of XM_017384856.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B6ZKR2 ((Putative metallophosphoesterase 1 isoform X1 {ECO:0000313|EMBL:MPA43533.1}) (3.1.3.36 {ECO:0000313|EMBL:MPA43533.1}))

HSP 1 Score: 488.804 bits (1257), Expect = 1.346e-170
Identity = 235/388 (60.57%), Postives = 300/388 (77.32%), Query Frame = 0
 
Query:    5 KILPFVIIIILIIYEDRISTPSCKLVPSSNPPENISEEIGQNSSEDDLKVMIVANLLLLGSKAGYFNFFFRDYYLSKFFKKSFQVLKPDMLLVLGDVSARGAELTRSNWSSVIQQFHRVLGPFLELPYHVLLGDRDIGGCSDLNSGSVSWISSNFPGLDSSGCSAFGIGNISFVSLNSVALLCGDNSLRFGVEKTVETESTELQMETEQTEQPVQVSKDIRLE--DFIWRENALSSGSGPVLLLHMPLHLRANRFQESNMYDKKAEYKHQDATRKGSSDLAGLGPYELWHTLPLNATEYIFQALKPRIIFSAHTHKFCDRTHYDGTREITVPAMSWEAVDDPGFVFASFKSNRKSITVSHCLLAKESSVIFTCTSILVLSILSLLVTH 390
            ++LP +I+ +LI+YEDR+S PSC++VPS++      EE   +   +DLKVM+VA+LLLLGS+AGY N +FRDY+LSKFF+KSF++LKPDMLLVLGDVSARG+ELTR+ WSSV+QQFHR+LGPFL LP+HV+LGDRDIG C  LN+ SV+ ISS+FPGLDS+GC AF I NISFVS+N++ALLCG+N LRF VEK +E ES +L+M++EQT + +  S   RL   DF WRENA+SSGSGPVLLLH PLH  AN     +       + H+ +    S      GPYEL HTLP NATEYIFQAL+PRI+FSAHTH+FCDRTH DGTRE+TVPAM+W+A +DPGFV A+F+ N +++ VS+C LA+ES V+    SILVL I ++ V +
Sbjct:    7 QVLPLIIVTVLIVYEDRVSIPSCEMVPSADH----EEEHVNDYHPEDLKVMMVADLLLLGSEAGYMNLYFRDYHLSKFFRKSFEILKPDMLLVLGDVSARGSELTRNKWSSVLQQFHRLLGPFLGLPFHVILGDRDIGECGGLNARSVNRISSSFPGLDSAGCGAFEISNISFVSVNAMALLCGNNKLRFSVEKVIERESIDLRMDSEQTTEVINESSKTRLASGDFGWRENAMSSGSGPVLLLHFPLHQTANSNSWGSSSSDGINHSHKSSKTPESRGHVETGPYELLHTLPPNATEYIFQALRPRIVFSAHTHEFCDRTHSDGTREVTVPAMTWKARNDPGFVVATFRRNGRAVIVSNCSLARESYVLLAYVSILVLLISTMFVAN 390
[Close]
BLAST of XM_017384856.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q0Q3 ((Metallophosphoesterase {ECO:0000313|EMBL:PSR99993.1}))

HSP 1 Score: 486.493 bits (1251), Expect = 1.453e-169
Identity = 238/395 (60.25%), Postives = 305/395 (77.22%), Query Frame = 0
 
Query:    5 KILPFVIIIILIIYEDRISTPSCKLVPSSNPPENISEEIGQNSSEDDLKVMIVANLLLLGSKAGYFNFFFRDYYLSKFFKKSFQVLKPDMLLVLGDVSARGAELTRSNWSSVIQQFHRVLGPFLELPYHVLLGDRDIGGCSDLNSGSVSWISSNFPGLDSSGCSAFGIGNISFVSLNSVALLCGDNSLRFGVEKTVETESTELQMETEQTEQPVQVSKDIRLE--DFIWRENALSSGSGPVLLLHMPLHLRANRFQ-ESNMYDKKAEYKHQDATRKGSSDLAGLGPYELWHTLPLNATEYIFQALKPRIIFSAHTHKFCDRTHYDGTREITVPAMSWEAVDDPGFVFASFKSNRKSITVSHCLLAKESSVIFTCTSILVLSILSLLVTHTPQNNI 396
            ++LP ++I  LII+EDR+S PSC++V  +   +N+ E     +  DDLKVM+VANLLLLGS+AGY N FFRDYYLSKFF +SF +LKPDMLLVLGD+SA+G+ELTRS WSSV+QQFHR+LGPFL LP+HV+LGDRDIG CS LN+ SV+W++SNFPGLDS+GC AF IGNI+FVSLN++ALLCG+N+LRF VEK +E ES +L+M+ EQT + +  S + R+   DF WREN++SSGSGPVLLLH PLH   N+    ++ Y   +   H+ +    S    G GPY+L HTLP NATEYIFQAL+PRI+FSAH+H F DRTH DGTREITVPAM+W+A +DPGFV A+FKSN +  T+SHC LAKES+V+   TSI+VL   ++LV  +   ++
Sbjct:    7 RVLPLIVIAALIIFEDRVSIPSCEVVVPTGE-QNVEE-----NHPDDLKVMMVANLLLLGSEAGYRNIFFRDYYLSKFFARSFGILKPDMLLVLGDLSAKGSELTRSRWSSVLQQFHRLLGPFLGLPFHVILGDRDIGDCSKLNAISVNWLASNFPGLDSAGCGAFEIGNITFVSLNALALLCGNNNLRFSVEKVIERESIDLRMDIEQTTEVLDGSSEYRMSSGDFGWRENSMSSGSGPVLLLHFPLHWTGNKNSWGTSAYCGTSSPSHERSKIPESRGSVGTGPYDLLHTLPPNATEYIFQALRPRIVFSAHSHIFRDRTHSDGTREITVPAMTWDARNDPGFVVATFKSNGRGATISHCSLAKESNVLLAYTSIVVLFTSTMLVAKSSHAHL 395
[Close]
BLAST of XM_017384856.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A833UG20 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5450855.1}))

HSP 1 Score: 471.085 bits (1211), Expect = 4.111e-163
Identity = 228/389 (58.61%), Postives = 287/389 (73.78%), Query Frame = 0
 
Query:    7 LPFVIIIILIIYEDRISTPSCKLVPSS-NPPENISEEIGQNSSEDDLKVMIVANLLLLGSKAGYFNFFFRDYYLSKFFKKSFQVLKPDMLLVLGDVSARGAELTRSNWSSVIQQFHRVLGPFLELPYHVLLGDRDIGGCSDLNSGSVSWISSNFPGLDSSGCSAFGIGNISFVSLNSVALLCGDNSLRFGVEKTVETESTELQMETEQTEQPVQVSKDIRL--EDFIWRENALSSGSGPVLLLHMPLHLRANRFQESNMYDKKAEYKHQDATRKGSSDLAGLGPYELWHTLPLNATEYIFQALKPRIIFSAHTHKFCDRTHYDGTREITVPAMSWEAVDDPGFVFASFKSNRKSITVSHCLLAKESSVIFTCTSILVLSILSLLVTHTP 392
            LP + I+ LI+YE+R+S PSCK+V  + +  +  +E +G     +DLKVM+VANLLLLGS+AG+   +FRDYY+SKFF+KSF++L PDMLLVLGDVSA+G+ELTR+ W SV+ QFH +LGPFL LPYHV+LGDRDIG CS LN  SV W++SNFPGLDS+GC AF I NISFVSLNSV+LLCG N+LRFGVEK VE ES ELQME E   +PV    +IR    +F W+ N +SSGSGPVLLLH PLH  A+    ++ + K  +   + +       L G+GPY+L HTLP N TEYIFQALKPRI+FSAHTH FCD  H DGT E+TVPAM+W A DDPGFV A+F  NR +++VS+C LA+ES VI    S  V+ +L++L+   P
Sbjct:   32 LPLITILALIVYEERVSIPSCKIVLGAVDLSQPATEFVGD---PEDLKVMMVANLLLLGSEAGFVELYFRDYYMSKFFQKSFEILNPDMLLVLGDVSAKGSELTRAKWVSVLHQFHGLLGPFLGLPYHVILGDRDIGQCSSLNVKSVHWVASNFPGLDSAGCGAFEISNISFVSLNSVSLLCGINNLRFGVEKVVERESVELQMEAEDATEPVNEYSEIREINHNFGWKANTISSGSGPVLLLHFPLHKTADGSCSADSFRKSLKLSRESSNAPDGRGLVGIGPYKLSHTLPPNVTEYIFQALKPRIVFSAHTHGFCDHLHPDGTHEVTVPAMTWNAGDDPGFVVATFHRNRNAVSVSYCSLARESHVIVAYISFTVMFVLTMLIAKPP 417
[Close]
BLAST of XM_017384856.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438FZY0 ((Metallophosphoesterase 1 {ECO:0000313|EMBL:RVW65519.1}))

HSP 1 Score: 462.996 bits (1190), Expect = 1.648e-160
Identity = 224/391 (57.29%), Postives = 283/391 (72.38%), Query Frame = 0
 
Query:    6 ILPFVIIIILIIYEDRISTPSCKLVPSSNPPENISEEIGQNSSEDDLKVMIVANLLLLGSKAGYFNFFFRDYYLSKFFKKSFQVLKPDMLLVLGDVSARGAELTRSNWSSVIQQFHRVLGPFLELPYHVLLGDRDIGGCSDLNSGSVSWISSNFPGLDSSGCSAFGIGNISFVSLNSVALLCGDNSLRFGVEKTVETESTELQMETEQTEQPVQVSKDI--RLEDFIWRENALSSGSGPVLLLHMPLHLRANRFQESNMYDKKAEYKHQDATRKGSSDLAGLGPYELWHTLPLNATEYIFQALKPRIIFSAHTHKFCDRTHYDGTREITVPAMSWEAVDDPGFVFASFKSNRKSITVSHCLLAKESSVIFTCTSILVLSILSLLVTHTPQN 394
            +LP +I  +L+ YE+R STPSC +VP       + E +G +   +DLKVM+VANLLLLGSKAGY N FFRD+YLSKFFKKSF  LKPDMLLVLGD+SA G++LTRS W  V+ QF R+LGPFL LP++V+LGDRD+G C+ LN+ SV W++ NFPGLDS+GC AF + NISFVSLN+VALLCG+N LRF VEK +E ES +LQM+ E T + +   K       +  WRENA+SSGSGPVLLLH PLH  +N      +  +      +     GS  L G GPYEL HTLP NATEYIFQAL+PRI+FSAH+H+FCDRTH DGTRE+TVPAM+W A DDPGFV A+F+ NR ++ +SHC LA+ES ++    S+L+L +  + V    Q+
Sbjct:    7 VLPLLIFYLLVFYEERASTPSCVVVPQGG----VQEAVGDDP--EDLKVMVVANLLLLGSKAGYLNLFFRDFYLSKFFKKSFASLKPDMLLVLGDISAEGSDLTRSEWIPVLHQFRRMLGPFLALPFYVILGDRDVGECNQLNAKSVYWVAKNFPGLDSAGCGAFEVSNISFVSLNAVALLCGNNGLRFSVEKVIERESIDLQMDIEGTTEELNELKKFGETSHNLEWRENAMSSGSGPVLLLHFPLHHTSN-CSGDGVPTRSYNSLFERTEIPGSRQLVGTGPYELLHTLPPNATEYIFQALRPRIVFSAHSHRFCDRTHPDGTREVTVPAMTWNAGDDPGFVVATFRKNRGAVIISHCSLARESHILIAYISLLILFMSMIFVAKQTQH 390
[Close]
BLAST of XM_017384856.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7HTU8 (Metallophos domain-containing protein {ECO:0000259|Pfam:PF00149})

HSP 1 Score: 464.151 bits (1193), Expect = 2.038e-160
Identity = 236/393 (60.05%), Postives = 292/393 (74.30%), Query Frame = 0
 
Query:    3 LIKILPFVIIIILIIYEDRISTPSCKLVPSSNPPENISEEIGQNSSEDDLKVMIVANLLLLGSKAGYFNFFFRDYYLSKFFKKSFQVLKPDMLLVLGDVSARGAELTRSNWSSVIQQFHRVLGPFLELPYHVLLGDRDIGGCSDLNSGSVSWISSNFPGLDSSGCSAFGIGNISFVSLNSVALLCGDNSLRFGVEKTVETESTELQMETEQTEQPVQVSKDIRLE--DFIWRENALSSGSGPVLLLHMPLHLRANRFQESNMYDKKAEYKHQDATRK--GSSDLAGLGPYELWHTLPLNATEYIFQALKPRIIFSAHTHKFCDRTHYDGTREITVPAMSWEAVDDPGFVFASFKSNRKSITVSHCLLAKESSVIFTCTSILVLSILSLLVTHT 391
            ++++LP ++I +L+++EDR+S PSC +VP  N  +++ E+       DDLKVM+VANLLLLGS+AGY N FF DYYLSKFF+KSF++LKPDMLLVLGDVSARG++LTRS WSSVI QFH++LGPF   P+HV+LGDRD G CS+LN+ SV+W++ NFPGLDSSGC AF I NISFVSLN+VALLCG+N LRF VEK  +  S       EQT + +  S   RL   DF WRENA+SSGSGPVLLLH PLH   N    +N +D  A     D + K   S    G GPY+L+H LP NATEYIFQALKPRI+FSAHTHKFCDRTH DGTREITVPAM+W+A  +PGFV A FK N   +TVSHC LA+ES+V+    SI++L I ++LV  +
Sbjct:   48 VLRLLPLIVIAVLVVFEDRVSIPSCVVVP--NGGQHVEED-----HPDDLKVMMVANLLLLGSEAGYKNIFFSDYYLSKFFEKSFKILKPDMLLVLGDVSARGSKLTRSKWSSVINQFHKLLGPFHGRPFHVILGDRDTGDCSELNAISVNWLAGNFPGLDSSGCGAFEISNISFVSLNAVALLCGNNKLRFSVEKICKWYS-------EQTTKVLDESSKFRLASGDFGWRENAMSSGSGPVLLLHFPLHWTEN----NNYWDNSA----VDESSKIIESRGFVGTGPYDLFHALPPNATEYIFQALKPRIVFSAHTHKFCDRTHSDGTREITVPAMTWDARSEPGFVVALFKRNGGVVTVSHCSLARESNVLIAYISIVILFISTMLVAKS 418
[Close]
BLAST of XM_017384856.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A438F8L8 ((Metallophosphoesterase 1 {ECO:0000313|EMBL:RVW56274.1}))

HSP 1 Score: 461.84 bits (1187), Expect = 5.078e-160
Identity = 223/391 (57.03%), Postives = 283/391 (72.38%), Query Frame = 0
 
Query:    6 ILPFVIIIILIIYEDRISTPSCKLVPSSNPPENISEEIGQNSSEDDLKVMIVANLLLLGSKAGYFNFFFRDYYLSKFFKKSFQVLKPDMLLVLGDVSARGAELTRSNWSSVIQQFHRVLGPFLELPYHVLLGDRDIGGCSDLNSGSVSWISSNFPGLDSSGCSAFGIGNISFVSLNSVALLCGDNSLRFGVEKTVETESTELQMETEQTEQPVQVSKDI--RLEDFIWRENALSSGSGPVLLLHMPLHLRANRFQESNMYDKKAEYKHQDATRKGSSDLAGLGPYELWHTLPLNATEYIFQALKPRIIFSAHTHKFCDRTHYDGTREITVPAMSWEAVDDPGFVFASFKSNRKSITVSHCLLAKESSVIFTCTSILVLSILSLLVTHTPQN 394
            +LP +I  +L+ YE+R STPSC +VP       + E +G +   +DLKVM+VANLLLLGSKAGY N FFRD+YLSKFFKKSF  LKPDMLLVLGD+SA G++LTRS W  V+ QF R+LGPFL LP++V+LGDRD+G C+ LN+ SV W++ NFPGLDS+GC AF + NISFVSLN+VALLCG+N LRF VEK +E ES +LQM+ E T + +   +       +  WRENA+SSGSGPVLLLH PLH  +N      +  +      +     GS  L G GPYEL HTLP NATEYIFQAL+PRI+FSAH+H+FCDRTH DGTRE+TVPAM+W A DDPGFV A+F+ NR ++ +SHC LA+ES ++    S+L+L +  + V    Q+
Sbjct:    7 VLPLLIFYLLVFYEERASTPSCVVVPQGG----VQEAVGDDP--EDLKVMVVANLLLLGSKAGYLNLFFRDFYLSKFFKKSFASLKPDMLLVLGDISAEGSDLTRSEWIPVLHQFRRMLGPFLALPFYVILGDRDVGECNQLNAKSVYWVAKNFPGLDSAGCGAFEVSNISFVSLNAVALLCGNNGLRFSVEKVIERESIDLQMDIEGTTEELNELQKFGETSHNLEWRENAMSSGSGPVLLLHFPLHHTSN-CSGDGVPTRSYNSLFERTEIPGSRQLVGTGPYELLHTLPPNATEYIFQALRPRIVFSAHSHRFCDRTHPDGTREVTVPAMTWNAGDDPGFVVATFRKNRGAVIISHCSLARESHILIAYISLLILFMSMIFVAKQTQH 390
[Close]
BLAST of XM_017384856.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A6J1ABF4 ((metallophosphoesterase 1-like isoform X1 {ECO:0000313|RefSeq:XP_021284507.1}))

HSP 1 Score: 462.225 bits (1188), Expect = 5.862e-160
Identity = 225/399 (56.39%), Postives = 301/399 (75.44%), Query Frame = 0
 
Query:    1 MALIKILPFVIIIILIIYEDRISTPSCKLVP--SSNPPENISEEIGQNSSEDDLKVMIVANLLLLGSKAGYFNFFFRDYYLSKFFKKSFQVLKPDMLLVLGDVSARGAELTRSNWSSVIQQFHRVLGPFLELPYHVLLGDRDIGGCSDLNSGSVSWISSNFPGLDSSGCSAFGIGNISFVSLNSVALLCGDNSLRFGVEKTVETESTELQMETE---QTEQPVQVSKDIRLEDFIWRENALSSGSGPVLLLHMPLHLRANRF-QESNMYDKKAEYKHQDATRKGSSDLAGLGPYELWHTLPLNATEYIFQALKPRIIFSAHTHKFCDRTHYDGTREITVPAMSWEAVDDPGFVFASFKSNRKSITVSHCLLAKESSVIFTCTSILVLSILSLLVTHTPQ 393
            +A   +LP +II   I+YE+R+S PSCK +P  +++P E++  E G   S +DLKVM+VANLLLLGS+AG+ N +FRDYY+SKFFKKSFQ LKPDMLLVLGDVSA+G+EL+RS W SV  QF ++LGPFLELP HV+LGDRD+G C DL++ SV+W++ NFPGLDSSGC AF I NISFVSLN+VALLCG+N LRFGVEK +E ES +LQM+T+   +T+    +S+++   DF WRENA++SGSGPVL+LH PL+   N + +E + +          +    SS+ +  GPY+L  T+P NATEYIF ALKPRIIFSAHTH+F D +H DGTRE+TVPAM+W   +DPGFV A+F+ N  +++V++C +A+ES ++   T  LVL I+ ++V++TPQ
Sbjct:    4 VAWRSLLPVIIISAFIVYEERVSFPSCKHLPDTTNHPGEHVGNEDG---SPEDLKVMMVANLLLLGSEAGFVNLYFRDYYMSKFFKKSFQSLKPDMLLVLGDVSAKGSELSRSKWLSVFHQFDQILGPFLELPLHVILGDRDVGECCDLDAKSVNWVARNFPGLDSSGCGAFEISNISFVSLNAVALLCGNNKLRFGVEKVIERESVDLQMKTKSTAETKDESGMSRELSY-DFGWRENAMTSGSGPVLVLHFPLYRPGNTYSREGSAFKSTIHPSGHSSNFIESSNFSASGPYDLSQTVPPNATEYIFHALKPRIIFSAHTHEFSDHSHPDGTREVTVPAMTWNTGNDPGFVVATFRGNNSAVSVTYCSVARESDILIAYTCTLVLFIILVIVSNTPQ 398
[Close]
BLAST of XM_017384856.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A061FGL1 ((Calcineurin-like metallo-phosphoesterase superfamily protein, putative isoform 1 {ECO:0000313|EMBL:EOY16053.1}))

HSP 1 Score: 461.455 bits (1186), Expect = 1.129e-159
Identity = 228/399 (57.14%), Postives = 300/399 (75.19%), Query Frame = 0
 
Query:    1 MALIKILPFVIIIILIIYEDRISTPSCKLVP--SSNPPENISEEIGQNSSEDDLKVMIVANLLLLGSKAGYFNFFFRDYYLSKFFKKSFQVLKPDMLLVLGDVSARGAELTRSNWSSVIQQFHRVLGPFLELPYHVLLGDRDIGGCSDLNSGSVSWISSNFPGLDSSGCSAFGIGNISFVSLNSVALLCGDNSLRFGVEKTVETESTELQMETE---QTEQPVQVSKDIRLEDFIWRENALSSGSGPVLLLHMPLHLRANRF-QESNMYDKKAEYKHQDATRKGSSDLAGLGPYELWHTLPLNATEYIFQALKPRIIFSAHTHKFCDRTHYDGTREITVPAMSWEAVDDPGFVFASFKSNRKSITVSHCLLAKESSVIFTCTSILVLSILSLLVTHTPQ 393
            +A   +LP +II   I+YE+R+S PSCK +P  +++P E+I  E G   S +DL VM+VANLLLLGS AG+ N +FRDYY+SKFFKKSFQ LKPDMLLVLGDVSA+G+EL+RS W SV  QF R+LGPFLELP HV+LGDRD+G C DL++ SV+W++ NFPGLDSSGC AF I NISFVSLN+V LLCG+N LRFGVEK VE +S +LQM+T+   +T+    +S+++    F WRENA++SGSGPVL+LH PL+   N + +E + +          +    SS+L+G GPY+L  T+P NATEYIFQALKPRIIFSAHTH+F D TH DGTRE+TVPAM+W A  DPGF+ A+F+ N  +++V++C +A+ES ++   T  LVL I+ ++V++TPQ
Sbjct:    4 VAWRSLLPVIIISAFIVYEERVSFPSCKHLPDTTNHPGEHIGNEDG---SPEDLTVMMVANLLLLGSDAGFVNLYFRDYYMSKFFKKSFQSLKPDMLLVLGDVSAKGSELSRSKWLSVFHQFDRILGPFLELPLHVILGDRDVGECCDLDAKSVNWVARNFPGLDSSGCGAFEISNISFVSLNAVPLLCGNNKLRFGVEKVVERKSVDLQMKTKSTAETKDESGMSRELSY-GFGWRENAMTSGSGPVLVLHFPLYRPGNTYSREGSAFKSTIHPSGHSSNFVESSNLSGSGPYDLSQTVPPNATEYIFQALKPRIIFSAHTHEFSDHTHPDGTREVTVPAMTWNARVDPGFIVATFRGNISAVSVTYCSVARESDILIVYTCTLVLFIILVIVSNTPQ 398
[Close]
BLAST of XM_017384856.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7N2N632 (Metallophos domain-containing protein {ECO:0000259|Pfam:PF00149})

HSP 1 Score: 459.144 bits (1180), Expect = 6.429e-159
Identity = 225/384 (58.59%), Postives = 289/384 (75.26%), Query Frame = 0
 
Query:    1 MALIKILPFVIIIILIIYEDRISTPSCKLVPSSNPPENISEEIGQNSSEDDLKVMIVANLLLLGSKAGYFNFFFRDYYLSKFFKKSFQVLKPDMLLVLGDVSARGAELTRSNWSSVIQQFHRVLGPFLELPYHVLLGDRDIGGCSDLNSGSVSWISSNFPGLDSSGCSAFGIGNISFVSLNSVALLCGDNSLRFGVEKTVETESTELQMETEQTEQPVQVSKDIR--LEDFIWRENALSSGSGPVLLLHMPLHLRANRFQES-NMYDKKAEYKHQDATRKGSSDLAGLGPYELWHTLPLNATEYIFQALKPRIIFSAHTHKFCDRTHYDGTREITVPAMSWEAVDDPGFVFASFKSNRKSITVSHCLLAKESSVIFTCTSILVL 381
            MA   ++  ++I  L+IYE+ +S PSCKLVP+S+    +  +       DDLKVM+VANLLLLGS++ +FN  FRDYYLSKFF+KSF+ LKPDMLLVLGDVSA+G+ELTRS W SV+ QFH +LGPF+ LPYHV+LGDRDIG CS+LN  SV+W++SNFPGLDS+GC AF I NISFVSLN+VALLCG+N+LRFGVEK VE ES +LQ+ETE   + +  +  +R    +F W+EN++SSGSGPVLLLH PL+   +      N + +  ++  + +   GS  L   GPY+L  TLP NATEYIFQALKPRI+FSAHTH+FCD+ H DGTRE++VPAM+W A DDPGFV A+F  NR++++VS+C LA+ES VI    S +VL
Sbjct:    1 MAWRPVMGLILIFALVIYEEWVSIPSCKLVPTSSTDLELDLD-----HPDDLKVMLVANLLLLGSESPFFNSNFRDYYLSKFFRKSFESLKPDMLLVLGDVSAKGSELTRSKWVSVLHQFHGLLGPFIGLPYHVILGDRDIGECSELNVRSVNWMASNFPGLDSAGCGAFEISNISFVSLNAVALLCGNNNLRFGVEKVVERESVDLQIETEGAAEVMNKASKLRETEHNFGWKENSISSGSGPVLLLHFPLYQTVDSNCSGFNAFKRTLKHSRESSNMLGSRRLVETGPYKLSQTLPRNATEYIFQALKPRIVFSAHTHEFCDQLHSDGTREVSVPAMTWNARDDPGFVVATFHRNRRAVSVSYCSLARESHVIIAYVSFVVL 379
[Close]
BLAST of XM_017384856.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2P2LPG1 (Metallophos domain-containing protein {ECO:0000259|Pfam:PF00149})

HSP 1 Score: 459.529 bits (1181), Expect = 1.884e-158
Identity = 229/406 (56.40%), Postives = 296/406 (72.91%), Query Frame = 0
 
Query:    2 ALIKILPFVIIIILIIYEDRISTPSCKLVPSSNPPENISE-EIGQNSSEDDLKVMIVANLLLLGSKAGYFNFFFRDYYLSKFFKKSFQVLKPDMLLVLGDVSARGAELTRSNWSSVIQQFHRVLGPFLELPYHVLLGDRDIGGCSDLNSGSVSWISSNFPGLDSSGCSAFGIGNISFVSLNSVALLCGDNSLRFGVEKTVETESTELQME-------TEQTEQPVQVSKDIRL------EDFIWRENALSSGSGPVLLLHMPLHL--RANRFQESNMYDKKAEYKHQDATRKGSSDLAGLGPYELWHTLPLNATEYIFQALKPRIIFSAHTHKFCDRTHYDGTREITVPAMSWEAVDDPGFVFASFKSNRKSITVSHCLLAKESSVIFTCTSILVLSILSLLVTHT 391
            A   +L   +   L++Y+D + TPSCK+VPSS   +   + ++G++ + DDL+VMIVANLLLLGS+AG+FN +FRDYY+SKFF+KSF  L+PDMLLVLGDVSARG+ELT++ W SV+ QFHRVLGPFL+LPYHV+LGDRD+G CS LN+ SV WI+ NFPGLDS+GC AF I N+SFVSLN+VALLCG+N LRF VE+ +ETES  ++M+       T   E+    S+ I++        F WR+N + SGSGP LLLH PLH     N  QE ++  K A    Q +    +      GPYEL HT+P NATEYIFQALKPRI+FSAHTH FCD TH DGTRE+TVPAM+W+  DDPGF+ A+F+S+R +I+VS+C LA+ES V+ T TS+LVL ++  LV +T
Sbjct:   23 AWRPLLLLTVFAFLVLYDDWVFTPSCKIVPSSTGADPTGQFDVGESQNPDDLRVMIVANLLLLGSEAGFFNLYFRDYYMSKFFRKSFDSLRPDMLLVLGDVSARGSELTKTGWVSVLYQFHRVLGPFLQLPYHVVLGDRDVGQCSGLNTNSVHWIARNFPGLDSAGCGAFEISNVSFVSLNAVALLCGNNKLRFSVERVIETESIHMKMDLDGAKEGTGDYEEMGDDSEKIKIGFEGTSTSFQWRKNVIESGSGPALLLHFPLHRWPTNNGCQEIDISKKAANPWQQGSEALVNWRFTNTGPYELLHTVPPNATEYIFQALKPRIVFSAHTHAFCDHTHSDGTREVTVPAMTWKVRDDPGFIVATFQSDRNAISVSYCSLARESHVLITYTSLLVLLLMPWLVANT 428
Match NameStatsDescription
A0A5B6ZKR2E-Value: 1.346e-170, PID: 60.57(Putative metallophosphoesterase 1 isoform X1 {ECO... [more]
A0A2R6Q0Q3E-Value: 1.453e-169, PID: 60.25(Metallophosphoesterase {ECO:0000313|EMBL:PSR99993... [more]
A0A833UG20E-Value: 4.111e-163, PID: 58.61(Uncharacterized protein {ECO:0000313|EMBL:KAF5450... [more]
A0A438FZY0E-Value: 1.648e-160, PID: 57.29(Metallophosphoesterase 1 {ECO:0000313|EMBL:RVW655... [more]
A0A7J7HTU8E-Value: 2.038e-160, PID: 60.05Metallophos domain-containing protein {ECO:0000259... [more]
A0A438F8L8E-Value: 5.078e-160, PID: 57.03(Metallophosphoesterase 1 {ECO:0000313|EMBL:RVW562... [more]
A0A6J1ABF4E-Value: 5.862e-160, PID: 56.39(metallophosphoesterase 1-like isoform X1 {ECO:000... [more]
A0A061FGL1E-Value: 1.129e-159, PID: 57.14(Calcineurin-like metallo-phosphoesterase superfam... [more]
A0A7N2N632E-Value: 6.429e-159, PID: 58.59Metallophos domain-containing protein {ECO:0000259... [more]
A0A2P2LPG1E-Value: 1.884e-158, PID: 56.40Metallophos domain-containing protein {ECO:0000259... [more]
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Analysis: 
NameDescription
Carrot Genome Assembly DCARv2

An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4.

There are a few different naming schemes for this assembly. First there is the
Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below.
These sequences can be viewed in JBrowse here.

Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0

LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926.

Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence.

RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records.

The NCBI Sequence report lists the correspondences between the various naming methods

Link to the LNRQ01000000.1 master record at NCBI

Raw Reads: Link to SRA accessions used for the genome assembly

This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100

The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results.

View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/

Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.