Resource Type:
Polypeptide
Name:
XM_017387068.1
Identifier:
XM_017387068.1-protein
Sequence:
MPFLKNVFHSKPSSSTSSSPSESPLSSTRSLGSKRKLTRQRKLRHVTEFD
LGLQPVDDRSKSLPVSPNSGSLSPPNFRHWPVNAVPQPLPLPESLSGFKT
GDSSQSNGRGRGGEGTSSSFVNAGQSPNHVARKSPTVPTYHRRGFRQENA
SDAQSFRLNVPARSAPTSGFSSPAVSPQRFHSVNFLHSSYDLPRESKSSN
DGNAVSTSHVLPERITASPDHSPLHSPILLSPHRGTRNPSGIARHSIYKS
LPESPVAWPEGNNSIVHPLPLPPGAPVPSHSPSPSHSLKPSHTTNGSSTK
GQWQKEKLIGRGTYGSVYIAINRNDGAMCAMKEVDVISNDSKSAECIKQL
EQEIKVLQQLDHPNIVQYLGSEIIEDRFCIYLEYVHPGSVNNYVREHCGS
ITESVVRSFTRHILSGLAYLHSTNTIHRDIKGANLLVNASGVVKLADFGL
AKHLTKYAVDLSLKGSPYWMAPEVLQSMMRKDSNPELAFAVDIWSVGCTV
IEMLTGKPPWSEYNGVQALFNVLNRSPSIPETLSAEGKDFLRKCFQRDPA
DRPTAAALLDHPFVRNKQDQVSSCRREFSGLKLHDASMSLINKNRQNLRS
VSPCNWTQKGKAPSNGVARAVSYPESPDHFGTSSTDFREHLQTKPSNTSS
SWSRKSRKVQQSPHH
Sequence Length:
665
Sequence Checksum:
5012b8574a8aa7b9691022a34e5929a7
View location in JBrowse:
Organism:
Relationship:
| Relationships |
|---|
| The polypeptide, XM_017387068.1, derives from mRNA, XM_017387068.1. |
Blast Results:
The following BLAST results are available for this feature:
BLAST of XM_017387068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
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Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10
BLAST of XM_017387068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5B7BNT4 ((Putative mitogen-activated protein kinase kinase kinase YODA-like isoform X1 {ECO:0000313|EMBL:MPA69511.1}) (2.7.11.25 {ECO:0000313|EMBL:MPA69511.1}))
HSP 1 Score: 740.725 bits (1911), Expect = 0.000e+0
Identity = 394/642 (61.37%), Postives = 474/642 (73.83%), Query Frame = 0
Match: A0A5B7BNT4 ((Putative mitogen-activated protein kinase kinase kinase YODA-like isoform X1 {ECO:0000313|EMBL:MPA69511.1}) (2.7.11.25 {ECO:0000313|EMBL:MPA69511.1}))
HSP 1 Score: 740.725 bits (1911), Expect = 0.000e+0
Identity = 394/642 (61.37%), Postives = 474/642 (73.83%), Query Frame = 0
Query: 32 GSKRKLTRQRKLRHVTEFDLGLQPVDDRSKSLPVSPNSGSLSPPNFRHWPVNAVPQPLPLPESLSGFKTGDSSQSNGRGRGGE----------GTSSSFVNAG--QSPNHVARKSPTVPTYHRRGFRQENASDA--QSFRLNVPARSAPTSGFSSPAVSPQRFHSVNFLHSSYDLPRESKSSN------DGNAVSTSHVLPERITASPDHSPLHSPILLSPHRGTRNPSGIARHSIYKSLPESPVAWPEGN-NSIVHPLPLPPGAPVPSHSPSPSHSLKPSHTTNGSSTKGQWQKEKLIGRGTYGSVYIAINRNDGAMCAMKEVDVISNDSKSAECIKQLEQEIKVLQQLDHPNIVQYLGSEIIEDRFCIYLEYVHPGSVNNYVREHCGSITESVVRSFTRHILSGLAYLHSTNTIHRDIKGANLLVNASGVVKLADFGLAKHLTKYAVDLSLKGSPYWMAPEVLQSMMRKDSNPELAFAVDIWSVGCTVIEMLTGKPPWSEYNGVQALFNVLNRSPSIPETLSAEGKDFLRKCFQRDPADRPTAAALLDHPFVRNKQDQ-VSSCRREFSGLKLHDASMSLINKNR--QNLRSVSPCNWTQKGKAPSNGVARAVSYPESPDHFGTSSTDFREHLQTKPSNTS 649
GSKR+LTRQRKLRHV+ LGLQ + D+S+SLPVSP+SGS SP N HW +AVPQPLPLP+ S + S G G G + T S F + ++ +HVA KS PTY RRGF Q+ ++ +FRLNVPARSAPTSGFSSPAVSPQRF SVN HSS+ + RE + S+ D A S+S V P RIT S DHSPLHSP + SP R TR+P+ HS +KSLPE+ P+GN ++ VHPLPLPPG PSHS + H ++ + S KGQWQK K IG GTYG+VY+A NR GA+CAMKEV++I +D+KSAECI QLEQEIKVLQ L HPNIVQY GSE++EDRFCIYLEYVHPGS+NNYVREHC ++TESVVR+FTRHILSGLAYLHST TIHRDIKGANLLV++SGVVKLADFGLAKHLT + DLSLKGSP+WMAPEVLQ++MRKD+NPELAFAVDIWS+GCTVIEML G+PPWSE++GVQA+FNVLN+SP IPETLS+EGKDFLR CFQR+PADRP+A LLDHPF+RN DQ VS C +EFSG+KL ++S S + R ++L +SP + K P +G + SYPE+ D +S R L+ PS +S
Sbjct: 42 GSKRRLTRQRKLRHVSGVGLGLQ-LSDQSQSLPVSPDSGSRSPSNLGHWSASAVPQPLPLPDDRSNSRLPKEGPSRGEGDGRDKTGGANPSSSATGSYFAHQTIRKTTDHVATKSSKSPTYRRRGFPQDLNIESVHHNFRLNVPARSAPTSGFSSPAVSPQRFSSVNIFHSSFAVSREFQVSSALEVSVDRLAGSSSQVSPARITCSADHSPLHSPTIQSPCRNTRSPNDFVLHSHHKSLPENSTTRPDGNSHANVHPLPLPPGVSKPSHSTTIRHIME---KPDISLMKGQWQKGKCIGSGTYGTVYVATNRETGALCAMKEVNLIRDDTKSAECINQLEQEIKVLQHLKHPNIVQYYGSEVVEDRFCIYLEYVHPGSINNYVREHCRAVTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGLAKHLTGHFTDLSLKGSPHWMAPEVLQAVMRKDTNPELAFAVDIWSLGCTVIEMLNGQPPWSEFSGVQAMFNVLNKSPPIPETLSSEGKDFLRWCFQRNPADRPSANKLLDHPFLRNSHDQNVSVCMQEFSGMKLMESSHSPRDWTRHVKDLMPISPGIQIRHAKLPCSGESCPQSYPETSDTPASSRHSPRSTLEVLPSISS 679
BLAST of XM_017387068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A5J5B388 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 715.687 bits (1846), Expect = 0.000e+0
Identity = 390/671 (58.12%), Postives = 465/671 (69.30%), Query Frame = 0
Match: A0A5J5B388 (Protein kinase domain-containing protein {ECO:0000259|PROSITE:PS50011})
HSP 1 Score: 715.687 bits (1846), Expect = 0.000e+0
Identity = 390/671 (58.12%), Postives = 465/671 (69.30%), Query Frame = 0
Query: 32 GSKRKLTRQRKLRHVTEFDLGLQPVDDRSKSLPVSPNSGSLSPPNFR----------HWPVNAVPQPLPLPESLSGFKTGDSSQSNGRGRG-GEG-------------TSSSFVNAG--QSPNHVARKSPTVPTYHRRGFRQE-NASDAQSFRLNVPARSAPTSGFSSPAVSPQRFHSVNFLHSSYDLPRESKSS------NDGNAVSTSHVLPERITASPDHSPLHSPILLSPHRGTRNPSGIARHSIYKSLPESPVAWPEGN-NSIVHPLPLPPGAPVPSHSPSPSHSL-KPSHTTNGSSTKGQWQKEKLIGRGTYGSVYIAINRNDGAMCAMKEVDVISNDSKSAECIKQLEQEIKVLQQLDHPNIVQYLGSEIIEDRFCIYLEYVHPGSVNNYVREHCGSITESVVRSFTRHILSGLAYLHSTNTIHRDIKGANLLVNASGVVKLADFGLAKHLTKYAVDLSLKGSPYWMAPEVLQSMMRKDSNPELAFAVDIWSVGCTVIEMLTGKPPWSEYNGVQALFNVLNRSPSIPETLSAEGKDFLRKCFQRDPADRPTAAALLDHPFVRNKQDQ-VSSCRREFSGLKLHDASMSLINKNR--QNLRSVSPCNWTQKGKAPSNGVARAVSYPESPDHFGTSSTDFREHLQTKPSNTSSSWSRKSRKVQQSPH 664
GSKR+LTRQRKLRHV+ +LGLQP D+S+SLPVSP+SGS SP N HW +AVP PLPLPE + G RG G+G T S F + ++ +HVA KS TY RRGF Q+ N +FRLNVPARSAPTSGFSSPA+SPQRF +V+ SS PRE ++S D A S+S V P R+T S DHSPL SP SP + R P+ I HS +KSLPE+ WPEGN ++ VHPLPLPPG PSHS H + KP + SS KGQWQK KLIGRGTYGSVY A N GA+CAMKEVD++ +D+ SAECIKQLEQEIKVLQ L HPNIV+Y GSE++EDRFCIYLEYVHPGS+N YVR+H ++TESVVR+FTRHIL GLAYLH T T+HRDIKGANLLV++SGVVKLADFGLAKHL+ + DLSLKGSP+WMAPEVL ++MRKD+NPELAFAVDIWSVGCTVIEML GKPPWSE+ GVQA+FNV+N+SP IPETLS EGKDFLRKCFQR+PADRP+AA LLDHPF+RN DQ VS C +EFSG+KL D S S ++ + + L +SP + K NG +Y E+ D S R L+ PS +S ++ + SP+
Sbjct: 62 GSKRRLTRQRKLRHVSGVELGLQP-SDQSQSLPVSPDSGSRSPSNLDSGLRSSSNLGHWSASAVPVPLPLPELQQNDRLSSRVHKEGSSRGQGDGRDETGGSIPSSPATGSYFTHQTIRKTTDHVATKSSKSRTYRRRGFPQDLNVESVYNFRLNVPARSAPTSGFSSPALSPQRFSTVDLFPSSSMFPREFQASPALEVSVDRLAGSSSQVSPARVTCSADHSPLPSPTRQSPCQNNRCPNDIVLHSHHKSLPENSTTWPEGNSHASVHPLPLPPGVSKPSHSTIIRHIMEKP----DISSMKGQWQKGKLIGRGTYGSVYEATNCKTGALCAMKEVDLVPDDTTSAECIKQLEQEIKVLQHLKHPNIVEYYGSEVVEDRFCIYLEYVHPGSINKYVRDHFRAVTESVVRNFTRHILLGLAYLHGTKTVHRDIKGANLLVDSSGVVKLADFGLAKHLSGHFTDLSLKGSPHWMAPEVLLAVMRKDTNPELAFAVDIWSVGCTVIEMLNGKPPWSEFTGVQAMFNVMNKSPPIPETLSPEGKDFLRKCFQRNPADRPSAATLLDHPFLRNSHDQNVSVCMQEFSGMKLMDTSQSPRDRTKHVKELMPISPGKLIRHSKLSCNGETSPQTYRETLDTAAASRLSPRSTLEVIPSTSSPEFNSSPHNISPSPN 727
BLAST of XM_017387068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0EKS7 ((Mitogen-activated protein kinase kinase kinase 5 {ECO:0000313|EMBL:GFY86902.1}))
HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0
Identity = 367/625 (58.72%), Postives = 441/625 (70.56%), Query Frame = 0
Match: A0A7J0EKS7 ((Mitogen-activated protein kinase kinase kinase 5 {ECO:0000313|EMBL:GFY86902.1}))
HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0
Identity = 367/625 (58.72%), Postives = 441/625 (70.56%), Query Frame = 0
Query: 33 SKRKLTRQRKLRHVTEFDLGLQPVDDRSKSLPVSPNSGSLSPPNFRHWPVNAVPQPLPLPESLSGFKTGDSSQ----SNGRGRGGE----------GTSSSFVNAGQS----PNHVARKSPTVPTYHRRGFRQENASD--AQSFRLNVPARSAPTSGFSSPAVSPQRFHSVNFLHSSYDLPRESKS-------SNDGNAVSTSHVLPERITASPDHSPLHSPILLSPHRGTRNPSGIARHSIYKSLPESPVAWPEGNNSI-VHPLPLPPGAPVPSHSPSPSHSLKPSHTTNGSSTKGQWQKEKLIGRGTYGSVYIAINRNDGAMCAMKEVDVISNDSKSAECIKQLEQEIKVLQQLDHPNIVQYLGSEIIEDRFCIYLEYVHPGSVNNYVREHCGSITESVVRSFTRHILSGLAYLHSTNTIHRDIKGANLLVNASGVVKLADFGLAKHLTKYAVDLSLKGSPYWMAPEVLQSMMRKDSNPELAFAVDIWSVGCTVIEMLTGKPPWSEYNGVQALFNVLNRSPSIPETLSAEGKDFLRKCFQRDPADRPTAAALLDHPFVRNKQDQ-VSSCRREFSGLKLHDASMSLINKNRQNLRSVSPCNWTQKGKAPSNGVARAVSYPESPD 628
SKR+LTRQRKLRH+ + D L DD+S+SLPVSP+SGS SP N HW AVPQPLPLPE S K D S G +G E G++S + QS + SP PTY RRGF Q+ + +FRLNVPARSAPTSGFSSPA+SP+RF +V+ HS + P+E + +D A S V R + +PDHSP+HSP S ++ TRNP+ +A HS +KSLPE + W +G+N HPLPLPPG P P+ S P +S++ + S K QWQK KLIGRGTYGSV+ AIN GA+CAMKEVD+I +D KSAECI+QLEQEIKVLQ L HPNIVQY G E++ED FCIYLEYVHPGS+N YVR+H G++TE+VVR+FTRHIL GLAYLHST TIHRDIKGANLLV+ASGVVKLADFGLAKHLT A+DLSLKGSP+WMAPEVLQS+MRKDSNP+LA+AVDIWSVGCTVIEML GKPPWSE+ GVQA+FNVLN+SP+IPETLS+EGKDFLR CFQR+P DRP A LLDHPF+ + DQ VS C REFSG+ + D S ++ + SV + + P +G +YPES D
Sbjct: 39 SKRRLTRQRKLRHLADVDSRLN-RDDQSRSLPVSPDSGSPSPANLGHWSAAAVPQPLPLPEFGSLNKPNDQSNFPSSKGGPIKGDERNRTESSNPSGSASGSYFSPQSIRKNTDCTVTNSPKTPTYRRRGFPQDLNVERIPLNFRLNVPARSAPTSGFSSPALSPKRFRTVDLFHSPFMSPQEFRGLSALEGPVSDKLACSPPPVRSARHSCTPDHSPIHSPKWQSAYQSTRNPTIVAFHSHHKSLPEGSMGWRDGSNQANPHPLPLPPGGPKPAQSTPPRYSME---NQDLSMKKSQWQKGKLIGRGTYGSVFQAINCETGALCAMKEVDIIGDDPKSAECIRQLEQEIKVLQHLKHPNIVQYYGCEMVEDHFCIYLEYVHPGSINKYVRDHLGAVTENVVRNFTRHILLGLAYLHSTKTIHRDIKGANLLVDASGVVKLADFGLAKHLTGSAIDLSLKGSPHWMAPEVLQSVMRKDSNPQLAYAVDIWSVGCTVIEMLNGKPPWSEFTGVQAMFNVLNKSPTIPETLSSEGKDFLRWCFQRNPVDRPPATWLLDHPFLHSSHDQDVSVCMREFSGINITDIPHSPRDRAQNMKGSVPTSPGARIRQLPCDGETSPKTYPESSD 659
BLAST of XM_017387068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6RN12 ((Mitogen-activated protein kinase kinase kinase {ECO:0000313|EMBL:PSS31392.1}))
HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0
Identity = 365/625 (58.40%), Postives = 438/625 (70.08%), Query Frame = 0
Match: A0A2R6RN12 ((Mitogen-activated protein kinase kinase kinase {ECO:0000313|EMBL:PSS31392.1}))
HSP 1 Score: 646.736 bits (1667), Expect = 0.000e+0
Identity = 365/625 (58.40%), Postives = 438/625 (70.08%), Query Frame = 0
Query: 33 SKRKLTRQRKLRHVTEFDLGLQPVDDRSKSLPVSPNSGSLSPPNFRHWPVNAVPQPLPLPESLSGFKTGDS----SQSNGRGRGGE----------GTSSSFVNAGQS----PNHVARKSPTVPTYHRRGFRQENASD--AQSFRLNVPARSAPTSGFSSPAVSPQRFHSVNFLHSSYDLPRESKS-------SNDGNAVSTSHVLPERITASPDHSPLHSPILLSPHRGTRNPSGIARHSIYKSLPESPVAWPEGNNSI-VHPLPLPPGAPVPSHSPSPSHSLKPSHTTNGSSTKGQWQKEKLIGRGTYGSVYIAINRNDGAMCAMKEVDVISNDSKSAECIKQLEQEIKVLQQLDHPNIVQYLGSEIIEDRFCIYLEYVHPGSVNNYVREHCGSITESVVRSFTRHILSGLAYLHSTNTIHRDIKGANLLVNASGVVKLADFGLAKHLTKYAVDLSLKGSPYWMAPEVLQSMMRKDSNPELAFAVDIWSVGCTVIEMLTGKPPWSEYNGVQALFNVLNRSPSIPETLSAEGKDFLRKCFQRDPADRPTAAALLDHPFVRNKQDQ-VSSCRREFSGLKLHDASMSLINKNRQNLRSVSPCNWTQKGKAPSNGVARAVSYPESPD 628
SKR+LTRQRKLRH+ + D L DD+S+SLPVSP+SGS SP N HW AVPQPLPLPE + K D S G +G E G++S + QS + SP PTY RRGF Q+ + +FRLNVPARSAPTSGFSSPA+SP+RF +V+ HS + P+E + +D A S V R + +PDHSP+HSP S + TR P+ +A HS +KSLPE + W +G+N HPLPLPPG P P+ S P +S++ + S K QWQK KLIGRGTYGSV+ AIN GA+CAMKEVD+I +D KSAECI+QLEQEIKVLQ L HPNIVQY G E++ED FCIYLEYVHPGS+N YVR+H G++TE+VVR+FTRHIL GLAYLHST TIHRDIKGANLLV+ASGVVKLADFGLAKHLT A+DLSLKGSP+WMAPEVLQS+MRKDSNP+LA+AVDIWSVGCTVIEML GKPPWSE+ GVQA+FNVLN+SP+IPETLS+EGKDFLR CFQR+P DRP A LLDHPF+ + DQ VS C REFSG+ + D S ++ + SV + + P +G YPES D
Sbjct: 41 SKRRLTRQRKLRHLADVDSRLN-RDDQSRSLPVSPDSGSPSPANLGHWSAAAVPQPLPLPEFGALNKPNDQCNFPSSKGGPIKGDERNRTESSNPSGSASGSYFSSQSIRKNTDCAVTNSPKTPTYRRRGFPQDLNVERIPLNFRLNVPARSAPTSGFSSPALSPKRFRTVDLFHSPFMSPQEFRGLSALEGPVSDKLACSPPPVRSARHSCTPDHSPIHSPKWQSACQSTRIPTIVAFHSHHKSLPEGSMGWRDGSNQANPHPLPLPPGGPKPAQSTPPRYSME---NQDLSMKKSQWQKGKLIGRGTYGSVFEAINCETGALCAMKEVDIIGDDPKSAECIRQLEQEIKVLQHLKHPNIVQYYGCEMVEDHFCIYLEYVHPGSINKYVRDHLGAVTENVVRNFTRHILLGLAYLHSTKTIHRDIKGANLLVDASGVVKLADFGLAKHLTGSAIDLSLKGSPHWMAPEVLQSVMRKDSNPQLAYAVDIWSVGCTVIEMLNGKPPWSEFTGVQAMFNVLNKSPTIPETLSSEGKDFLRWCFQRNPVDRPPATWLLDHPFLHSSHDQDVSVCLREFSGINITDIPHSPRDRAQNMKGSVPTSPGARIRQLPCDGETSPKPYPESSD 661
BLAST of XM_017387068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6Q010 ((Mitogen-activated protein kinase kinase kinase {ECO:0000313|EMBL:PSR99735.1}))
HSP 1 Score: 644.425 bits (1661), Expect = 0.000e+0
Identity = 364/627 (58.05%), Postives = 442/627 (70.49%), Query Frame = 0
Match: A0A2R6Q010 ((Mitogen-activated protein kinase kinase kinase {ECO:0000313|EMBL:PSR99735.1}))
HSP 1 Score: 644.425 bits (1661), Expect = 0.000e+0
Identity = 364/627 (58.05%), Postives = 442/627 (70.49%), Query Frame = 0
Query: 33 SKRKLTRQRKLRHVTEFDLGLQPVDDRSKSLPVSPNSGSLSPPNFRHWPVNAVPQPLPLPESLSGFKTGDSSQ----SNGRGRGGE----------GTSSSFVNAGQS----PNHVARKSPTVPTYHRRGFRQENASDAQS----FRLNVPARSAPTSGFSSPAVSPQRFHSVNFLHSSYDLPRESKS-------SNDGNAVSTSHVLPERITASPDHSPLHSPILLSPHRGTRNPSGIARHSIYKSLPESPVAWPEGNNSI-VHPLPLPPGAPVPSHSPSPSHSLKPSHTTNGSSTKGQWQKEKLIGRGTYGSVYIAINRNDGAMCAMKEVDVISNDSKSAECIKQLEQEIKVLQQLDHPNIVQYLGSEIIEDRFCIYLEYVHPGSVNNYVREHCGSITESVVRSFTRHILSGLAYLHSTNTIHRDIKGANLLVNASGVVKLADFGLAKHLTKYAVDLSLKGSPYWMAPEVLQSMMRKDSNPELAFAVDIWSVGCTVIEMLTGKPPWSEYNGVQALFNVLNRSPSIPETLSAEGKDFLRKCFQRDPADRPTAAALLDHPFVRNKQDQ-VSSCRREFSGLKLHDASMSLINKNRQNLRSVSPCNWTQKGKAPSNGVARAVSYPESPD 628
SKR+LTRQRKLRH+ + D L D+S+SLPVSP+SGS SP N HW AVPQPLPLPE + + D S G +G E G++S + QS + SP PTY RRGF Q+ D +S FRLNVPARSAPTSGFSSPA+SP+RF +V+ HS + P+E + +D A S V R + +PDHSP+HSP S + TRNP+ +A HS +KSLPE + +G+N HPLPLPPG P P+ S + +S++ + S K QW K KLIGRGTYGSV+ AIN GA+CAMKEVD+I +D KSAECI+QLEQEIKVLQ L HPNIVQY G E++E+RFCIYLEYVHPGS+N YVR+H G++TE+VVR+FTRHILSGLAYLHST TIHRDIKGANLLV+ASGVVKLADFGLAKHLT A+DLSLKGSP+WMAPEVLQS+MRKDSNP+LA+AVDIWSVGCTVIE+L GKPPWSE+ GVQA+FNVLN+SP+IPETLS+EGKDFLR CF+R+P DRP+AA LLDHPF+ + DQ VS C REFSG+ + D S ++ + SV + + P +G A YPES D
Sbjct: 43 SKRRLTRQRKLRHLADVDARLN-RPDQSRSLPVSPDSGSPSPANLEHWSAAAVPQPLPLPEFGALNRPNDQSNLPSPKGGPIKGDERNRTESSNPSGSASGSYFSPQSIRKNTDRAVTNSPKTPTYSRRGFPQD--LDVESVPLNFRLNVPARSAPTSGFSSPALSPKRFRTVDLFHSPFMSPQEFRGLSALEGPVSDTLACSPPPVRSARHSCTPDHSPIHSPKWQSACQSTRNPTSVAFHSHHKSLPEGSMGCRDGSNQANPHPLPLPPGGPKPAQSTTTRYSME---KQDLSMKKSQWLKGKLIGRGTYGSVFEAINCETGALCAMKEVDIIGDDPKSAECIRQLEQEIKVLQHLKHPNIVQYYGCEVVEERFCIYLEYVHPGSINKYVRDHFGAVTENVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGVVKLADFGLAKHLTGSAIDLSLKGSPHWMAPEVLQSVMRKDSNPQLAYAVDIWSVGCTVIEILNGKPPWSEFTGVQAMFNVLNKSPTIPETLSSEGKDFLRWCFKRNPVDRPSAAWLLDHPFLHSSHDQDVSVCMREFSGINIADIPHSPRDRTQNMKGSVPTSPGARIRQLPCDGETSAKLYPESSD 663
BLAST of XM_017387068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0DE14 ((Mitogen-activated protein kinase kinase kinase 5 {ECO:0000313|EMBL:GFS33173.1}))
HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0
Identity = 363/627 (57.89%), Postives = 440/627 (70.18%), Query Frame = 0
Match: A0A7J0DE14 ((Mitogen-activated protein kinase kinase kinase 5 {ECO:0000313|EMBL:GFS33173.1}))
HSP 1 Score: 640.958 bits (1652), Expect = 0.000e+0
Identity = 363/627 (57.89%), Postives = 440/627 (70.18%), Query Frame = 0
Query: 33 SKRKLTRQRKLRHVTEFDLGLQPVDDRSKSLPVSPNSGSLSPPNFRHWPVNAVPQPLPLPESLSGFKTGDSSQ----SNGRGRGGE----------GTSSSFVNAGQS----PNHVARKSPTVPTYHRRGFRQENASDAQS----FRLNVPARSAPTSGFSSPAVSPQRFHSVNFLHSSYDLPRESKS-------SNDGNAVSTSHVLPERITASPDHSPLHSPILLSPHRGTRNPSGIARHSIYKSLPESPVAWPEGNNSI-VHPLPLPPGAPVPSHSPSPSHSLKPSHTTNGSSTKGQWQKEKLIGRGTYGSVYIAINRNDGAMCAMKEVDVISNDSKSAECIKQLEQEIKVLQQLDHPNIVQYLGSEIIEDRFCIYLEYVHPGSVNNYVREHCGSITESVVRSFTRHILSGLAYLHSTNTIHRDIKGANLLVNASGVVKLADFGLAKHLTKYAVDLSLKGSPYWMAPEVLQSMMRKDSNPELAFAVDIWSVGCTVIEMLTGKPPWSEYNGVQALFNVLNRSPSIPETLSAEGKDFLRKCFQRDPADRPTAAALLDHPFVRNKQDQ-VSSCRREFSGLKLHDASMSLINKNRQNLRSVSPCNWTQKGKAPSNGVARAVSYPESPD 628
SKR+LTRQRKLRH+ + D L + D+S SLPVSP+SGS SP N HW AVPQPLPLPE + + D S G +G E G++S + QS + SP PTY RRGF Q+ D +S FRLNVPARSAPTSGFSSPA+SP+RF +V+ HS + P+E + +D A S V R + +PDHSP+HSP S + TRNP +A HS +KSLPE + +G+N HPLPLPPG P P+ S + +S++ + S K QW K KLIGRGTYGSV+ AIN GA+CAMKEVD+I +D KSAECI+QLEQEIKVLQ L HPNIVQY G E++E+RFCIYLEYVHPGS+N YVR+H G++TE+VVR+FTRHILSGLAYLHST TIHRDIKGANLLV+ASGVVKLADFGLAKHLT A+DLSLKGSP+WMAPEVLQS+MRKDSNP+LA+AVDIWSVGCTVIE+L GKPPWSE+ GVQA+FNVLN+SP+IPETLS+EGKDFLR CF+R+P DRP+AA LLDHPF+ + DQ VS C REFSG+ + D S ++ + SV + + P +G YPES D
Sbjct: 44 SKRRLTRQRKLRHLADVDARLN-LPDQSWSLPVSPDSGSPSPANLEHWSAAAVPQPLPLPEFGALNRPNDQSNLPSPKGGPIKGDERNRTESSNPSGSASGSYFSPQSIRKNTDRAVTNSPKTPTYSRRGFPQD--LDVESVPLNFRLNVPARSAPTSGFSSPALSPKRFRTVDLFHSPFMSPQEFRGLSALEGPVSDTLACSPPPVRSARHSCTPDHSPIHSPKWQSACQSTRNPISVAFHSHHKSLPEGSMGCRDGSNQANPHPLPLPPGGPKPAQSTTTRYSME---KQDLSMKKSQWLKGKLIGRGTYGSVFEAINCETGALCAMKEVDIIGDDPKSAECIRQLEQEIKVLQHLKHPNIVQYYGCEVVEERFCIYLEYVHPGSINKYVRDHFGAVTENVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDASGVVKLADFGLAKHLTGSAIDLSLKGSPHWMAPEVLQSVMRKDSNPQLAYAVDIWSVGCTVIEILNGKPPWSEFTGVQAMFNVLNKSPTIPETLSSEGKDFLRWCFKRNPVDRPSAAWLLDHPFLHSSHDQDVSVCMREFSGINIADTPHSPRDRTQNMKGSVPTSPGVRIRQLPCDGETSPKPYPESSD 664
BLAST of XM_017387068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2G9H169 ((MEKK {ECO:0000313|EMBL:PIN11235.1}) (2.7.11.25 {ECO:0000313|EMBL:PIN11235.1}))
HSP 1 Score: 632.484 bits (1630), Expect = 0.000e+0
Identity = 363/679 (53.46%), Postives = 452/679 (66.57%), Query Frame = 0
Match: A0A2G9H169 ((MEKK {ECO:0000313|EMBL:PIN11235.1}) (2.7.11.25 {ECO:0000313|EMBL:PIN11235.1}))
HSP 1 Score: 632.484 bits (1630), Expect = 0.000e+0
Identity = 363/679 (53.46%), Postives = 452/679 (66.57%), Query Frame = 0
Query: 1 MPFLKNVFHSKPSSSTSSSPSESPLSSTRSL-------GSKRKLTRQRKLRHVTEFDLGLQP--VDDRSKSLPVSPNSGSLSPPNFR---------HWPVNAVPQPLPLPESLSGFKTGDSSQSNGRGRGGEGTSSSFVNAGQSPNHVARKSPTVPTYHRRGFRQENASDAQS-FRLNVPARSAPTSGFSSPAVSPQRFHSVNFLHSSYDLPRESKSSNDGNAVSTSHVLPERITASPDHSPLHSPILLSP-HRGT-RNPSGIARHSIYKSLPESPVAWPEGNNSIVHPLPLPPGAPVPSHSPSPSHSLKPSHTTNGSSTKGQWQKEKLIGRGTYGSVYIAINRNDGAMCAMKEVDVISNDSKSAECIKQLEQEIKVLQQLDHPNIVQYLGSEIIEDRFCIYLEYVHPGSVNNYVREHCGSITESVVRSFTRHILSGLAYLHSTNTIHRDIKGANLLVNASGVVKLADFGLAKHLTKYAVDLSLKGSPYWMAPEVLQSMMRKDSNPELAFAVDIWSVGCTVIEMLTGKPPWSEYNGVQALFNVLNRSPSIPETLSAEGKDFLRKCFQRDPADRPTAAALLDHPFVRNKQDQ-VSSCRREFSGLKLHDASMSLINKNRQNLRSVSPCNWTQKGKAP-SNGVARAVSYPESPDHFGTSSTDFREHLQTKPSNTSSSWSRKS 656
MPFL + SSS+++ P + S+ + KRKLTRQRKLRHVT+ +LGL+ V D S+SLPVSP SGS R HW +AVPQPLP PE + DS G + S+ G++ + + + T Y RRGF Q N A++ FR + PARSAP SG+SSP +SPQR+ +V+ H P + S+ + +S+ + P +P+HSPLHSP SP +RG RN +G + HS KSLPE A P+ NN+ VHPLP PP + SP+ HS + +S KGQWQ+ + IGRGTYGSVYIA +R GA CA+KEV++I++D K ECIKQLEQEIK L++L HPNIVQY G EIIEDRFCIYLEYVHPGS+ YV EHCG++TES+VR+FTRHILSGLAYLHST TIHRDIKGANLLVNASGVVKLADFGLAKHLT ++LSLKG+P+WMAPEVLQ++MRKD++P+LA+ VDIWSVGCTVIEMLTGKPPWS+Y+GVQA+FNVLN++P +PETLSAEGKDFL+ CFQR PADRP+A LLDHPF+R+ QDQ V+ +EFSG KLHD M L + R Q+GK P NG PES + + S R L+ P +SS R+S
Sbjct: 1 MPFLWSAL----SSSSNNRPLKGKSKSSNDIYMNKASDEQKRKLTRQRKLRHVTDDELGLKSGGVTDGSQSLPVSPVSGSGPGSGARTPHHGGGGCHWSKSAVPQPLPRPEMNNQLAQNDSYHPPG--------NHSYQTFGKTTDDIGK---TSSAYRRRGFPQLNIDTAENDFRRHFPARSAPGSGYSSPVLSPQRYSTVDLFH-----PSSAMESSTLDRISSYQISP---LPTPEHSPLHSPTSRSPTNRGNFRNHNGASLHSHNKSLPEISTARPDANNANVHPLPRPPTSS--RQSPTSHHSFDKT----DNSVKGQWQRGRAIGRGTYGSVYIATHRETGATCAVKEVELITDDPKCKECIKQLEQEIKFLRELKHPNIVQYYGCEIIEDRFCIYLEYVHPGSITKYVHEHCGAMTESIVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVNASGVVKLADFGLAKHLTGNDIELSLKGTPHWMAPEVLQAVMRKDASPDLAYGVDIWSVGCTVIEMLTGKPPWSKYSGVQAMFNVLNKAPPVPETLSAEGKDFLQCCFQRRPADRPSAVELLDHPFLRSFQDQNVAGFVQEFSGSKLHDM-MPLSSGTR-----------IQQGKLPLHNGETSRQPCPESLEMWANSHHSPRSTLEVVPRISSSEVHRRS 638
BLAST of XM_017387068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1J6IU50 ((Mitogen-activated protein kinase kinase kinase yoda {ECO:0000313|EMBL:OIT04112.1}))
HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0
Identity = 344/641 (53.67%), Postives = 425/641 (66.30%), Query Frame = 0
Match: A0A1J6IU50 ((Mitogen-activated protein kinase kinase kinase yoda {ECO:0000313|EMBL:OIT04112.1}))
HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0
Identity = 344/641 (53.67%), Postives = 425/641 (66.30%), Query Frame = 0
Query: 29 RSLGSKRKLTRQRKLRHVTEFDLGLQP-------VDDRSKSLPVSPN------SGSLSPPNFRHWPV--------------------NAVPQPLPLPESLSGFKTGDSSQSNGRGRGGEGTSSSFVNAGQSPNHVARKSPTVPTYHRRGFRQENASDAQSFRLNVPARSAPTSGFSSPAVSPQRFHSVNFLHSSYDLPRESKSSNDGNAVSTSHVLPERITASPDHSPLHSPILLSPHRGTRNPSGIARHSIYKSLPESPVAWPEGNNSIVHPLPLPPGAP-VPSHSPSPSHSLKPSHTTNGSSTKGQWQKEKLIGRGTYGSVYIAINRNDGAMCAMKEVDVISNDSKSAECIKQLEQEIKVLQQLDHPNIVQYLGSEIIEDRFCIYLEYVHPGSVNNYVREHCGSITESVVRSFTRHILSGLAYLHSTNTIHRDIKGANLLVNASGVVKLADFGLAKHLTKYAVDLSLKGSPYWMAPEVLQSMMRKDSNPELAFAVDIWSVGCTVIEMLTGKPPWSEYNGVQALFNVLNRSPSIPETLSAEGKDFLRKCFQRDPADRPTAAALLDHPFVRNKQDQVSSCRREFSGLKLHDASMSLIN--KNRQNLRSVSPCNWTQKGKAPSNGVARAVSYPESPDHFGTS 633
R G R+LTRQRKLRHV++ +LGL+ +D+RSKSLPVSP SGS SP + RHW +AV LP+ + + S R + + V + Q P + PTY RR F Q+ ++ FRLNVPARSAP SGF+SP SP+RF + + + P S+ A S + P R+ S DHSPL SP L +P TRN A HS +KSLPES +AW EGNN VHPLPLPPG P S+ KP S TKGQW K KL+GRGTYGSVY A NR GA+CA+KEVD+ +D KSAECIKQLEQEI+VL+QL HPNIVQY GSEI+EDRF IYLEYVHPGS+N YVREHCG++TES+VR+FTRHI+SGLAYLHST TIHRDIKGANLLV+ASG+VKLADFGLAKHL+ A DLSLKGSP+WMAPEV+Q+++RKD+NPELAFAVDIWS+GCTVIEM G+PPW E+ GVQA+F+VL++SP IPE LSAEGKDFLR CFQR PADRP+A LL+H F+RN V+ C +FSG+KLHDA S + +++ L+ + P + GK+P + ++PE+ ++ S
Sbjct: 38 RIYGGGRRLTRQRKLRHVSDDELGLRGLNIQSLIIDERSKSLPVSPEFYVDFGSGSRSPHHLRHWSKSSPVPLPLPLPELNSLPKQNSAVDSNLPV-------RVDRDTLSPPLARDTSDRTPAEVTSSQHPRS------STPTYRRRRFPQDLNAEGVEFRLNVPARSAPGSGFTSPVPSPKRFSTQDLFQPPFHQP-----SSPSEAYSF-QLSPTRVINSADHSPLSSPTLPNPVNRTRNHRSSAVHSHHKSLPESSLAWTEGNNIDVHPLPLPPGVQRQPELCTIQSNMDKPC----ISPTKGQWLKGKLLGRGTYGSVYEATNRETGALCAIKEVDLTPDDPKSAECIKQLEQEIRVLRQLKHPNIVQYYGSEIMEDRFYIYLEYVHPGSINKYVREHCGAMTESIVRNFTRHIVSGLAYLHSTKTIHRDIKGANLLVDASGIVKLADFGLAKHLSSCATDLSLKGSPHWMAPEVMQAVLRKDANPELAFAVDIWSLGCTVIEMFNGQPPWGEFTGVQAMFSVLHKSPPIPEKLSAEGKDFLRCCFQRKPADRPSAMMLLEHAFLRNT---VAGCSEDFSGMKLHDALQSPKDPTNHKKELKPLLPGTSARHGKSPYSSENCQQTHPETCEYGAAS 652
BLAST of XM_017387068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7UT95 ((mitogen-activated protein kinase kinase kinase YODA-like {ECO:0000313|RefSeq:XP_009757433.1}))
HSP 1 Score: 615.92 bits (1587), Expect = 0.000e+0
Identity = 343/653 (52.53%), Postives = 432/653 (66.16%), Query Frame = 0
Match: A0A1U7UT95 ((mitogen-activated protein kinase kinase kinase YODA-like {ECO:0000313|RefSeq:XP_009757433.1}))
HSP 1 Score: 615.92 bits (1587), Expect = 0.000e+0
Identity = 343/653 (52.53%), Postives = 432/653 (66.16%), Query Frame = 0
Query: 26 SSTRSLGSKRKLTRQRKLRHVTEFDLGLQP-------VDDRSKSLPVSPN------SGSLSPPNFRHWPVNAVPQPLPLPESLSGFKTGDSSQSNGR-------------GRGGEGTSSSFVNAGQSPNHVARKSPTVPTYHRRGFRQENASDAQSFRLNVPARSAPTSGFSSPAVSPQRFHSVNFLHSSYDLPRESKSSNDGNAVSTSHVLPERITASPDHSPLHSPILLSPHRGTRNPSGIARHSIYKSLPESPVAWPEGNNSIVHPLPLPPGAPV-PSHSPSPSHSLKPSHTTNGSSTKGQWQKEKLIGRGTYGSVYIAINRNDGAMCAMKEVDVISNDSKSAECIKQLEQEIKVLQQLDHPNIVQYLGSEIIEDRFCIYLEYVHPGSVNNYVREHCGSITESVVRSFTRHILSGLAYLHSTNTIHRDIKGANLLVNASGVVKLADFGLAKHLTKYAVDLSLKGSPYWMAPEVLQSMMRKDSNPELAFAVDIWSVGCTVIEMLTGKPPWSEYNGVQALFNVLNRSPSIPETLSAEGKDFLRKCFQRDPADRPTAAALLDHPFVRNKQDQVSSCRREFSGLKLHDASMSLIN--KNRQNLRSVSPCNWTQKGKAPSNGVARAVSYPESPDHFGTSSTDFREHLQTKPSNTS 649
++ R G R+L RQRKLRHV++ +LGL+ +D+RSKSLPVSP SGS SP + RH ++ L+ +S+ + R + + V + Q P + PTY RR F Q+ ++ FRLNVPARSAP SGF+SP SP+RF + + + P S+ A S + P R+ S DHSPL SP L +P TRN A HS +KSLPES +AW EGNN VHPLPLPPG P S+ KP + TKGQW K KL+GRGTYGSVY A NR GA+CA+KEVD+ +D KSAECIKQLEQEI+VL+QL HPNIVQY GSEI+EDRFCIYLEYVHPGS+N YVREHCG++TES+VR+FTRHI+SGLAYLHST TIHRDIKGANLLV+ASG+VKLADFGLAKHL+ A DLSLKGSP+WMAPEV+Q+++RKD+NPELAFAVDIWS+GCTVIEM G+PPW E+NGVQA+F+VL++SP IPE LS+EGKDFLR CFQR PADRP+A LL+H F+RN V+ C +FSG+KLHDA S + +++ L+ + P + GK+P + ++PE+ ++ S R L+ P +S
Sbjct: 34 NTRRFYGGGRRLIRQRKLRHVSDDELGLRGLNIQSLIIDERSKSLPVSPEFYVDFGSGSRSPHHLRHCSKSSSVPLPLPLPELNSLPKQNSAVDSNLPVRVDRDPLNPPLARDTSDRTPAEVTSSQHPRS------STPTYRRRRFPQDLNAEGVEFRLNVPARSAPGSGFTSPVPSPKRFSTQDLFQPPFHQP-----SSPSEAYSF-QLSPTRVINSADHSPLSSPTLPNPVNRTRNHRSSAVHSHHKSLPESSLAWTEGNNIDVHPLPLPPGVQRHPELCTIQSNMDKPC----IAPTKGQWLKGKLLGRGTYGSVYEATNRETGALCAIKEVDLTPDDPKSAECIKQLEQEIRVLRQLKHPNIVQYYGSEIMEDRFCIYLEYVHPGSINKYVREHCGAMTESIVRNFTRHIVSGLAYLHSTKTIHRDIKGANLLVDASGIVKLADFGLAKHLSSCATDLSLKGSPHWMAPEVMQAVLRKDANPELAFAVDIWSLGCTVIEMFNGQPPWGEFNGVQAMFSVLHKSPPIPEKLSSEGKDFLRCCFQRKPADRPSAMMLLEHAFLRNT---VAGCSEDFSGMKLHDALQSPKDPTNHKKELKPLLPGTSARHGKSPYSSENCQQTHPETCEYGAASHHSPRSTLEVLPCISS 667
BLAST of XM_017387068.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7YD61 ((mitogen-activated protein kinase kinase kinase YODA-like isoform X1 {ECO:0000313|RefSeq:XP_009801063.1}))
HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0
Identity = 359/669 (53.66%), Postives = 444/669 (66.37%), Query Frame = 0
Match: A0A1U7YD61 ((mitogen-activated protein kinase kinase kinase YODA-like isoform X1 {ECO:0000313|RefSeq:XP_009801063.1}))
HSP 1 Score: 613.224 bits (1580), Expect = 0.000e+0
Identity = 359/669 (53.66%), Postives = 444/669 (66.37%), Query Frame = 0
Query: 1 MPFLKNVFHSKPSSSTSSSPSESPLSSTRSLGSKRKLTRQRKLRHVTEFDLGLQ-------PVDDRSKSLPVSP----NSGSLSPPNFRHWPVNAVPQPLPLPESLSGFKTGDSSQSNGRGRGGEGTSS-SFVNAGQSPNHVARKSPTVPTYHRRGFRQENASDA--QSFRLNVPARSAPTSGFSSPAVSPQRFHSVNFLHSSY-DLPRESKSSNDGNAVSTSHVLPERITASPDHSPLHSPILLSPHRGTRNPSGIARHSIYKSLPESPVAWPEGNNSIVHPLPLPPGAPVPSHSPSPSHSLKPSHTTNGSSTKGQWQKEKLIGRGTYGSVYIAINRNDGAMCAMKEVDVISNDSKSAECIKQLEQEIKVLQQLDHPNIVQYLGSEIIEDRFCIYLEYVHPGSVNNYVREHCGSITESVVRSFTRHILSGLAYLHSTNTIHRDIKGANLLVNASGVVKLADFGLAKHLTKYAVDLSLKGSPYWMAPEVLQSMMRKDSNPELAFAVDIWSVGCTVIEMLTGKPPWSEYNGVQALFNVLNRSPSIPETLSAEGKDFLRKCFQRDPADRPTAAALLDHPFVRNKQDQ-----VSSCRREFSGLKLHDASMSLINKNRQNLRSVSPCNWTQKGKAPSNGVARAVSYPESPDHFGTSSTDFREHLQTKPSNTS 649
MPF + F SSS S+SPSESP ++ + G R+LTR RKLRHV + ++ LQ VD+RSKS+PVSP NSGS S HW +A PQPLPLPE S K S G S+ Q N V R+S T P+Y RR F Q+ ++ ++FRL+V ARSAP SGF+SP +SP+R++SV+ ++ S S D A + R+T S DHSPL SP L +P T N A HS +KSLPES V WPE NN VHPLPLPPG P+ +++ + S KGQWQK +L+GRGTYGSVY A NR GA+CAMKEVD+ +D KSAECIKQLEQEI+VL+QL HPNIVQY GSE +ED FCIYLEYVHPGS+N YVREH G++TES+VR+FTRHI+SGLAYLHST TIHRDIKGANLLV+A GVVKLADFGLAKHL+ A DLSLKGSP+WMAPEV+Q+M+RKD+NPELA A+DIWS+GCTVIEM TG+PPWS +GV+A+F+ LN+SP +PETLS+EGKDFLR CFQR PADRPTA LL+HPF+ N + +S C +FS +KLH NL +SP +++ K+ NG S+ + D+ TS R L+ P +S
Sbjct: 1 MPFSRKAFSLFSSSSGSTSPSESP-NARKIYGGGRRLTRVRKLRHVGDDEVDLQHTNFHPFVVDERSKSMPVSPDNYKNSGSRSFQQSCHWSKSAEPQPLPLPELNSAPKQNLLSIVQGDASNPAVIRDPSYHAPVQMTNPVHRRSST-PSYRRRCFTQDPNAEGVEENFRLDVSARSAPGSGFTSPNLSPKRYNSVDLFRPTFHQASSASDISLDRLAGCPIQLSSARVTQSADHSPLSSPTLRNPVNRTWNHQNGAVHSHHKSLPESSVGWPESNN--VHPLPLPPGVSQQPQLPTGHNNMD---QPDVQSVKGQWQKGRLLGRGTYGSVYEATNRETGALCAMKEVDLNPDDPKSAECIKQLEQEIRVLRQLKHPNIVQYYGSETMEDIFCIYLEYVHPGSINKYVREHGGAMTESIVRNFTRHIVSGLAYLHSTKTIHRDIKGANLLVDACGVVKLADFGLAKHLSACATDLSLKGSPHWMAPEVMQAMLRKDANPELACAIDIWSLGCTVIEMYTGQPPWSGLDGVKAMFSALNKSPPVPETLSSEGKDFLRCCFQRKPADRPTALLLLEHPFLGNTSSREHSATISGCSEDFSRMKLHSPKDPTNLSKELNL--LSPGTSSRQAKSLCNGETSHRSHSVTCDYGATSHHSPRSTLEMLPCISS 660
| Match Name | Stats | Description |
|---|---|---|
| A0A5B7BNT4 | E-Value: 0.000e+0, PID: 61.37 | (Putative mitogen-activated protein kinase kinase ... [more] |
| A0A5J5B388 | E-Value: 0.000e+0, PID: 58.12 | Protein kinase domain-containing protein {ECO:0000... [more] |
| A0A7J0EKS7 | E-Value: 0.000e+0, PID: 58.72 | (Mitogen-activated protein kinase kinase kinase 5 ... [more] |
| A0A2R6RN12 | E-Value: 0.000e+0, PID: 58.40 | (Mitogen-activated protein kinase kinase kinase {E... [more] |
| A0A2R6Q010 | E-Value: 0.000e+0, PID: 58.05 | (Mitogen-activated protein kinase kinase kinase {E... [more] |
| A0A7J0DE14 | E-Value: 0.000e+0, PID: 57.89 | (Mitogen-activated protein kinase kinase kinase 5 ... [more] |
| A0A2G9H169 | E-Value: 0.000e+0, PID: 53.46 | (MEKK {ECO:0000313|EMBL:PIN11235.1}) (2.7.11.25 {E... [more] |
| A0A1J6IU50 | E-Value: 0.000e+0, PID: 53.67 | (Mitogen-activated protein kinase kinase kinase yo... [more] |
| A0A1U7UT95 | E-Value: 0.000e+0, PID: 52.53 | (mitogen-activated protein kinase kinase kinase YO... [more] |
| A0A1U7YD61 | E-Value: 0.000e+0, PID: 53.66 | (mitogen-activated protein kinase kinase kinase YO... [more] |
Analysis:
| Name | Description |
|---|---|
An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search | |
The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here. | |
This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction. |