XM_017383694.1 | CarrotOmics

Resource Type:

Polypeptide

Name:

XM_017383694.1

Identifier:

XM_017383694.1-protein

Sequence:

MMKRQEAHTFLDSSQSPTLRRQLLQTNEDQGIGEKHFEVGCVYEVDHLNL
PTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYP
FLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNSPEPAALRGI
FNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKG
SKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLREN
TRKAKKVKRETQSNKKSRRNKCKKMIVGSSINRWSAERYKLAEKNLLEVM
KSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFR
RRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLC
AKELRLLKEENAKIKRDMEDIVSNFKEELKKVRREMDEQFTKKIQEEIWS
LQVQSSAPWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMVEL
ASKTTDCCAEKERNHAALERCHALALKESASTGEKTAAEEKAAKLQKLKS
GFRICKPQGTFLWPNMGASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPP
QLPYHHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYSSTAIVAS
PKSKSNTSLINLNDIPDTDGAFSTAATKRHFLPSTVKRETASAWECIGSS
RCSNMSAFVAECTVNAGETSQQGKRECTSSTLCLSSAAGHRMPLSAANST
RG

Sequence Length:

752

Sequence Checksum:

334c3d75df6647caedd2fb9a640af188

View location in JBrowse:

DCARv2_Chr3:7681583..7684924-

Organism:

Daucus carota subspecies sativus

Relationship:

There is 1 relationship.
Relationships
The polypeptide, XM_017383694.1, derives from mRNA, XM_017383694.1.

Blast Results:

The following BLAST results are available for this feature:

BLAST of XM_017383694.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR

BLAST of XM_017383694.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Analysis Date: 2022-01-09
Analysis Name: NCBI peptide blastp to SwissProt and TrEMBL without DCAR
Total hits: 10

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BLAST of XM_017383694.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A4S4EMR0 ((Uncharacterized protein {ECO:0000313|EMBL:THG17949.1}))

HSP 1 Score: 593.193 bits (1528), Expect = 0.000e+0
Identity = 370/759 (48.75%), Postives = 497/759 (65.48%), Query Frame = 0

Query:    2 MKRQEAHTFLDSSQSPTLRRQLLQTNE-----DQGIGEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWL-IKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRKAKKVKRET--QSNKKSRRNKCKKM-IVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVS--NFKEELKKVRREMDEQFTKKIQEEIWSLQVQSSA--------------PWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMV-----ELASK----TTDCCAEKERNHAALERCHALALKESA-------STGEKTAAEEKAAKLQKLKSGFRICKPQGTFLWPNMGASN-----------GSSPLVFEVEDLFMVHTPPSVSSSTALAPPQLPY--HHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDT---DGAFSTAATKR-----HFLPSTVKRETASAWECIG 698
            +KRQE    +D +Q+P L R +L T++        I  +  EVG VYE+DH  LP RTPVQLK IRVVMV+EKTELNVSVR+PSI SL  Y S N+  + ++YP LDE FVMGT LA KVL R+I +QEF +      FWL I NS   +    + ++++ T  +S+LK NGM+RWG+RRQV+FI +  +    +PQSS+S V+G+KE  E E +E+ + E ++E+ +D E   E T+E  K+  KR    +R     AKKVKRE   Q NK   +N CK++ ++ +  +RWSA+RYKLAE+NLLEVMKSKGA+F SPILRP+LR EARKRIGDTGLLDHLLKH+AGK+APGG +RFRRRHNA+G MEYWLESADLV +R+EAGVQDPYWTPPPGW  GDCP+QDP+CA EL+ LK+E  K++RDME++VS     EEL K+RREM E  + K  EE  ++ V + +              P+KSD +S+ + + K ++QL  IS+ ++ +++++  L S V     +L S      T+CC EKE+              E A       +  E+TAAE+KAAK+Q+LKSGFRICKPQGTFLWPNM ++N            SS +V +VEDL +V TPPSVSSSTA APPQLP+  HHHH P+SP++P+ ERRAVTVTV  +   +  +     ++T   ++  +K++++L+NLND P T   DG   T +T++        PS V+ E    WE +G
Sbjct:    3 LKRQEQG--VDGAQTPPLARHVLPTSDCTIPSHSNIETQEIEVGSVYEIDHTKLPPRTPVQLKCIRVVMVSEKTELNVSVRFPSIESLQRYFS-NR--TREMYPELDERFVMGTTLAEKVLFRKIPSQEFAEKKQSNEFWLEICNSV--SGFGDVISRKSGT-CVSELKCNGMIRWGVRRQVRFIGKHRE----NPQSSSSIVRGAKEANEEEEEEEAEVEEEEEEEDDKEAVTEETNEIGKR--KRSSRLVR----NAKKVKREKRRQINKPKTKNSCKQIAVLKNPQDRWSADRYKLAERNLLEVMKSKGAVFGSPILRPELRAEARKRIGDTGLLDHLLKHMAGKVAPGGSDRFRRRHNAEGAMEYWLESADLVDIRREAGVQDPYWTPPPGWKQGDCPTQDPICAMELKQLKKETTKLERDMEEMVSKKQMDEELAKLRREMLELLSIKQNEESQAIVVSNPSATSQNLDLDTSLLVPFKSDLDSSFITLEKYKEQLMVISEYVSRIEEEIKKLKSKVGEEETKLDSSALMVATECCTEKEKKKVGENGKQQEVGTEGADNQSKTNTAAERTAAEQKAAKIQRLKSGFRICKPQGTFLWPNMASNNNKNSNANTSMLSSSQVVVQVEDLLVVPTPPSVSSSTASAPPQLPFHRHHHHHPSSPVKPLAERRAVTVTV--SAIGNPNVSTTTTTTTTTTSTITNKTSSTLLNLNDFPTTNPGDGFCGTPSTRQTVNNTTLTPSKVEGEMGRPWEVVG 741

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BLAST of XM_017383694.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J7I456 ((Uncharacterized protein {ECO:0000313|EMBL:KAF5959813.1}))

HSP 1 Score: 588.956 bits (1517), Expect = 0.000e+0
Identity = 370/761 (48.62%), Postives = 498/761 (65.44%), Query Frame = 0

Query:    2 MKRQEAHTFLDSSQSPTLRRQLLQTNEDQGI-------GEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWL-IKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRKAKKVKRET--QSNKKSRRNKCKKM-IVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVS--NFKEELKKVRREMDEQFTKKIQEEIWSLQVQSSA--------------PWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMV-----ELASK----TTDCCAEKERNHAALERCHALALKESA-------STGEKTAAEEKAAKLQKLKSGFRICKPQGTFLWPNMGASN-----------GSSPLVFEVEDLFMVHTPPSVSSSTALAPPQLPY--HHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDT---DGAFSTAATKR-----HFLPSTVKRETASAWECIG 698
            +KRQE    +D +Q+P L R +L T+ D  I        ++  EVG VYE+DH  LP RTPVQLK IRVVMV+EKTELNVSVR+PSI SL  Y S N+  + ++YP LDE FVMGT LA KVL R+I +QEF +      FWL I NS   +    + ++++ T  +S+LK NGM+RWG+RRQV+FI +  +    +PQSS+S V+G+KE  E E +E+ + E ++E+ +D E   E T+E  K+  KR    +R     AKKVKRE   Q NK   +N CK++ ++ +  +RWSA+RYKLAE+NLLEVMKSKGA+F SPILRP+LR EARKRIGDTGLLDHLLKH+AGK+APGG +RFRRRHNA+G MEYWLESADLV +R+EAGVQDPYWTPPPGW  GDCP+QDP+CA EL+ LK+E  K++RDME++VS     +EL K+RREM E  + K  EE  ++ V + +              P+KSD +S+ + + K ++QL  IS+ ++ +++++  L S V     +L S      T+CC EKE+              E A       +  E+TAAE+KAAK+Q+LKSGFRICKPQGTFLWPNM ++N            SS +V +VEDL +V TPPSVSSSTA APPQLP+  HHHH P+SP++P+ ERRAVTVTV  +   +  +     ++T   ++  +K++++L+NLND P T   DG   T +T++        PS V+ E    WE +G
Sbjct:    3 LKRQEQG--VDGAQTPPLARHVLPTS-DCTIPSHSNIETQEQIEVGSVYEIDHTKLPPRTPVQLKCIRVVMVSEKTELNVSVRFPSIESLQRYFS-NR--TREMYPELDERFVMGTTLAEKVLFRKIPSQEFAEKKQSNEFWLEICNSV--SGFGDVISRKSGT-CVSELKCNGMIRWGVRRQVRFIGKHRE----NPQSSSSIVRGAKEANEEEEEEEAEVEEEEEEEDDKEAVTEETNEIGKR--KRSSRLVR----NAKKVKREKRRQINKPKTKNSCKQIAVLKNPQDRWSADRYKLAERNLLEVMKSKGAVFGSPILRPELRAEARKRIGDTGLLDHLLKHMAGKVAPGGSDRFRRRHNAEGAMEYWLESADLVDIRREAGVQDPYWTPPPGWKQGDCPTQDPICAMELKQLKKETTKLERDMEEMVSKKQMDDELAKLRREMLELLSIKQNEESQAIVVSNPSATSQNLDLDTSLLVPFKSDLDSSFITLEKYKEQLMVISEYVSRIEEEIKKLKSKVGEEETKLDSSALMVATECCTEKEKKKVGENGKQQEVGTEGADNQSKTNTAAERTAAEQKAAKIQRLKSGFRICKPQGTFLWPNMASNNNKNSNANTSMLSSSQVVVQVEDLLVVPTPPSVSSSTASAPPQLPFHRHHHHHPSSPVKPLAERRAVTVTV--SAIGNPNVSTTTTTTTTTTSTITNKTSSTLLNLNDFPTTNPGDGFCGTPSTRQTVNNTTLTPSKVEGEMGRPWEVVG 742

[Close]

BLAST of XM_017383694.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A2R6PLV5 ((Protein DYAD like {ECO:0000313|EMBL:PSR93315.1}))

HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0
Identity = 358/748 (47.86%), Postives = 473/748 (63.24%), Query Frame = 0

Query:    2 MKRQEAHTFLDSSQSPTLRRQLLQTNE---DQGIGEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRKAKKVKRETQS----NKKSRRNKCKKMIVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVS--NFKEELKKVRREMDEQFT---KKIQEEIWSLQVQSS-----------APWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMVELASK-------TTDCCAEKERNHAALERCHALALKESASTGEKTAAEEKA---------------AKLQKLKSGFRICKPQGTFLWPNMGASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQLPYHHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDGAFSTA---------------ATKRHFLPSTVKRE 689
            +  QE     D +Q+P L R  L T++        ++  E+G VYE+DH  LP RTPVQL S RVVMV+EKTE+NVSV +PSI+SL  Y S    + +++YP LDE FVMGT LA KVL R++ +QEF +  + + FWL+ ++P       I NK    P +S++K NGMVRWG+RRQVKFI +  D+    PQSS+S V G ++    E  ED ++E  +E+ E+ E   E T+E ++   KRK Y  R    KAKK K E +     NK   +N CK++++ +S  RWSAERYKLAEKNLL+VMK+KGA+  +PILRP+LR EARK+IGDTGLLDHLLKH+AGK+APGG ERF+RRHNA+G MEYWLESADLV +R+EAGVQDPYWTPPPGW  GDC +QDP+CAKELR LKEE  K++RD+E++VS    +EE+ K+RREM+E      +K Q+E  ++ V +             P +SD +S++V + K E+QL  IS  ++ +++++G L S VE  ++       +T  CAEK++     +    +  K+  + G     + K                AK+Q+LKSGFRICKPQGTFLWPN  ++  SS +V +VEDL +V TPPSVSSSTA APPQLPYHHH  P SP+RP+ ERRAV VTV T   N+        S+T    +  +KS T+ INLND P TDG FS A               AT    LPST K E
Sbjct:   77 LNMQEQDNVDDGAQTPPLARHALPTSDCTLQSDETQEDIELGSVYEIDHTKLPRRTPVQLGSTRVVMVSEKTEVNVSVIFPSIQSLQRYFS---DTISEMYPELDERFVMGTKLAEKVLYRKVPSQEFAEKKHSDEFWLVISNPNRGFGDVISNK--AGPCLSEIKCNGMVRWGVRRQVKFIGKHIDND---PQSSSSIVIGEEKAKCEERKEDGQEEEPEEEEENEEAVTEETNETNQTG-KRKRYRPRL-VPKAKKAKLEIEKRRKMNKNMAKNNCKQIVLKNSQIRWSAERYKLAEKNLLDVMKAKGAVHGNPILRPELRSEARKQIGDTGLLDHLLKHMAGKVAPGGTERFQRRHNAEGAMEYWLESADLVDIRREAGVQDPYWTPPPGWELGDCLTQDPICAKELRQLKEETKKLERDVEEMVSKKQMEEEIAKLRREMEESLDSLPRKQQKESQAIVVSNPCVTSQELDLDMVPLESDLDSSMVTLEKYEEQLMAISKYMSRIEEEIGKLKSKVEQETRSGSALMESTGWCAEKKKKEVEEKDGLVVQKKDVGTEGGGGGDQRKTNTTEKAEEEKAAEKAAKIQRLKSGFRICKPQGTFLWPN--SNTLSSQVVVQVEDLLVVPTPPSVSSSTASAPPQLPYHHH--PASPVRPLAERRAVKVTVSTIGNNNFS------STTTTTTTTDNKSTTTFINLNDFP-TDG-FSGAPSLLAANCYHHHHHNATVATVLPSTAKGE 802

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BLAST of XM_017383694.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0GWK7 ((Similar to SWITCH1 {ECO:0000313|EMBL:GFZ15172.1}))

HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0
Identity = 336/679 (49.48%), Postives = 438/679 (64.51%), Query Frame = 0

Query:   34 EKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLS--LNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRKAKKVKRETQS----NKKSRRNKCKKMIVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVS--NFKEELKKVRREMDEQFTKKIQEEIWSLQVQSS-----------APWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMVE--------LASKTTDCCAEKERNHAALERCHALALKESASTGEKTAAEEKA-----------AKLQKLKSGFRICKPQGTFLWPNMGASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQLPYHHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDGAFST 674
            ++  E+G VYE+DH  LP RTPVQL S RVVMV+EKTE+NVSVR+PSI+SL  Y S  + +  +      LDE FVMGT LA KVL R++ +QEF +  + + FWL+ ++P       I NK    P +S++K NGMVRWG+RRQVKFI +  D+   +PQSS+S V G +     E  ED ++E  +E+ E  E+  E   E+  +  KRK Y  R  T KAKK K E +     NK   +N C ++++ +   RWSAERYKLAEKNLL+VMK+KGA+  +PILRP+LR EARKRIGDTGLLDHLLKH+AGK+APGG ERF+RRHNA+G MEYWLESADLV VR+EAGVQDPYWTPPPGW  GDC +QDP+CAKELR LKEE  K++RD E++VS    +EE+ K+RREM+E    K Q+E  ++ + +            AP +SD +S++V + K E+QL  IS  ++ +++++G L S VE        L   T  C  ++++     +    +  K+  S G     + K            AK+Q+LKSGFRICKPQGTFLWPN  ++  SS +V +VEDL +V TPPSVSSSTA APPQLPYHHH  P SP+RP+ ERRAV VTV T          +   ST    +  +KS T+ INLND P TDG   T
Sbjct:   13 QEDIELGSVYEIDHTKLPRRTPVQLGSTRVVMVSEKTEVNVSVRFPSIQSLQRYFSDTIRERRTQK----LDETFVMGTKLAEKVLYRKVPSQEFAEKKHSDEFWLVISNPTRGFGDVISNK--AGPCLSEIKCNGMVRWGVRRQVKFIGKHIDN---NPQSSSSIVIGEERAKCEERKEDGQEEEPEEEEE--EDNEEAVTEETNQTGKRKRYRPRLVT-KAKKAKFEIEKRRKMNKNMAKNNCNQIVLKNPQIRWSAERYKLAEKNLLDVMKAKGAVHGNPILRPELRSEARKRIGDTGLLDHLLKHMAGKVAPGGTERFQRRHNAEGAMEYWLESADLVDVRREAGVQDPYWTPPPGWELGDCLTQDPICAKELRQLKEETKKLERDAEEMVSKKQMEEEIAKLRREMEESLPWKQQKESQAIVISNPCVTSQELDLDMAPLESDLDSSMVTLEKYEEQLMAISKYMSRIEEEIGKLKSKVEQETRSGSALMESTGWCAEKEKKEVEEKDEGLVVQKKDVGSEGGDGGDQRKTNTTEKAAEEKAAKIQRLKSGFRICKPQGTFLWPN--SNTLSSQVVVQVEDLLVVPTPPSVSSSTASAPPQLPYHHH--PASPVRPLAERRAVKVTVSTV--------GNNNLSTTTTTTTDNKSTTTFINLNDFP-TDGFSGT 666

[Close]

BLAST of XM_017383694.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A7J0EDF6 ((Similar to SWITCH1 {ECO:0000313|EMBL:GFY84382.1}))

HSP 1 Score: 554.288 bits (1427), Expect = 0.000e+0
Identity = 340/694 (48.99%), Postives = 454/694 (65.42%), Query Frame = 0

Query:    5 QEAHTFLDSSQSPTLRRQLLQTNE---DQGIGEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRKAKKVKRETQSNKK----SRRNKCKKMIVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVS--NFKEELKKVRREMDEQFTKKIQEEIWSLQVQSSAPWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMVE--------LASKTTDCCAEKERNHAALERCHALALKESASTGEKTAAEEKA-----------AKLQKLKSGFRICKPQGTFLWPNMGASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQLPYHHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYS-STAIVASPKSKSNTSLINLNDIPDTD 669
            QE     D +Q+P L RQ L T++        ++  E+G VYE+DH  LP RTPVQL+S RVV+V+EKTE+NVSVR+PSI+SL +Y S    +  ++YP LDE FVMGT LA KVL R++ +QEF +  + + FWL+ ++        I NK  T  L  ++K +GMVRWG+RRQVKFI +  D+   +PQ S+SFV+ ++EK + E  E++  E +D++ E   EE   T    K+  KRK Y  R    KAKK K E +  ++      +N CK++++ +   RWSAERYKLAEKNLLEVMK+KGA+  +PILRP+LR EARK IGDTGLLDHLLKH+AGK APGG ERFRRRHNA+G MEYWLESADLV +R EAGVQDPYWTPPPGW  GDC +QDP+CAKELR LKE+  K++RD+E++VS    +EE+ K+RREM+E F++  Q+E  ++      P +SD +S+LV++ K E+QL  I+  +  +++++G L S VE        L   T  C  ++++     +   A+  KE  + G+    + K            AK+Q+LKSGFRICKPQGTFLWPN      SS +V +VEDL +V TPPSVSSSTA AP QLPYHHH  P SP++P+ ERRAV VTV T       + N  +S +T    +   +S T+LINLND P TD
Sbjct:    2 QEQGNVDDGAQTPPLARQALPTSDCTLQSDETQEDIELGSVYEIDHTKLPLRTPVQLRSTRVVIVSEKTEVNVSVRFPSIQSLQSYFS---DTIREMYPELDERFVMGTKLAEKVLYRKVPSQEFVEKKHSDEFWLVISNSNRGFGDVISNKAGTCLL--EIKCDGMVRWGVRRQVKFIGKHVDN---NPQPSSSFVR-AEEKAKCEEHEEDGQEEEDDNEEAVTEETNET----KQTGKRKRYSPRL-VPKAKKAKLEIEKRRQINKNKTKNNCKQIVLKNPQIRWSAERYKLAEKNLLEVMKAKGAVHGNPILRPELRSEARKLIGDTGLLDHLLKHMAGKAAPGGTERFRRRHNAEGAMEYWLESADLVNIRSEAGVQDPYWTPPPGWELGDCLTQDPICAKELRQLKEKTKKLERDVEEMVSKKQMEEEIAKLRREMEEVFSRNQQKESQAIVDLDMVPLESDLDSSLVKLEKYEEQLMAITKYVNRIEEEIGKLKSKVEQETRSGSALMESTGWCAEKEKKEVEEKDGGLAVQKKEGGTEGDGGGDQRKTNTTEKAAEEKAAKIQRLKSGFRICKPQGTFLWPNRNTL--SSQVVVQVEDLLVVPTPPSVSSSTASAPSQLPYHHH--PASPVKPLAERRAVKVTVST-------VGNTNFSTTTTTTTTTTDESTTTLINLNDFPTTD 670

[Close]

BLAST of XM_017383694.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A834LTY5 ((Uncharacterized protein {ECO:0000313|EMBL:KAF7148515.1}))

HSP 1 Score: 539.265 bits (1388), Expect = 0.000e+0
Identity = 322/664 (48.49%), Postives = 421/664 (63.40%), Query Frame = 0

Query:   37 FEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFW-LIKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSKEKLEHESDEDNKDENDDEDNEDGEEEREYTDEDDKKAVKRKPYCLRENTRKAKKVKRETQSN-KKSRRNKCKKMIVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVS--NFKEELKKVRREMDEQFTKKIQEEIWSLQVQSSAPWKSDFESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMV--ELASK-----TTDCCAEKERNHAALERCHA------------------LALKESASTGEKTAAEEKAA-KLQKLKSGFRICKPQGTFLWPNMGASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQLPYHHHHPPTSPIRPVPERRAVTVTVKTARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDG 670
             E+G VYE+DH  LP RTPVQL+S RVV+V+EKTELN+SVR+PS +SL  YLS      T++ P LDE FVMGT LA KVL RQ+ ++EF +    + FW LI NS        I NK  +   +S+LK NGM RWG+R QVKF+ R  +++    + +      ++E+   E+DE  K++                        KRK  C      K KK K E QS   K+R+  CK+      I RWSAERYK+AEKNLLEVMK+KGA++KSPILRP+LRLEARKRIGDTGLLDHLLKH+AGK+APGG ERFRRRHNA+G  EYWLESADLV +R+EAGVQDPYWTPPPGW  GDCPSQDP+CAKE++ LKEE +K++RD+E++VS    +EE+ K+RRE++E+ +KK Q+E      Q + P      + ++ + K  +++  +S  ++ +++++G L S V  E+ S      + + C EKE+         A                  +A KE+ STG   A EEKAA K+Q+ KSGFRICKPQGTFLWPNM     SS +V   EDL MV TPPSVSSS A APPQLPYHHH+ P  P++P+ ERRA+ VTV +       I +  +S+T    +  +K+ TSL+NLND P   G
Sbjct:   45 IELGSVYEIDHSKLPPRTPVQLRSTRVVVVSEKTELNISVRFPSTQSLQRYLS---EGITEMCPELDERFVMGTKLAEKVLFRQVRSREFTEKKNSKDFWQLISNSDCGIGDFVISNKAGSC--LSELKCNGMPRWGVRHQVKFVYRHTETNEDELEENEE----AEEENNGETDESRKND------------------------KRK-RCSSRLVPKGKKAKLENQSQINKTRKKNCKQ------IGRWSAERYKVAEKNLLEVMKAKGAVYKSPILRPELRLEARKRIGDTGLLDHLLKHMAGKVAPGGAERFRRRHNAEGVTEYWLESADLVDIRREAGVQDPYWTPPPGWKTGDCPSQDPICAKEMKELKEETSKLERDLEELVSKKQMEEEIAKLRREIEEELSKKQQQE-----SQETVPL-----NPMITLEKYMEEVMGVSGYVSRIEEEIGKLKSKVREEIKSDSALMVSAESCDEKEKKKVGKPLVVAQQKEAVGTEGRGDQGKTNIAEKEAESTG---AGEEKAAKKIQRPKSGFRICKPQGTFLWPNM----ASSQVVVHAEDLLMVPTPPSVSSSNASAPPQLPYHHHYRPY-PVKPLAERRALKVTVSS-------IGDTNFSTTMTTTAGTNKTTTSLMNLNDFPSHPG 643

[Close]

BLAST of XM_017383694.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1S3ZKP1 ((protein DYAD-like {ECO:0000313|RefSeq:XP_016465105.1}))

HSP 1 Score: 533.487 bits (1373), Expect = 9.753e-177
Identity = 357/808 (44.18%), Postives = 482/808 (59.65%), Query Frame = 0

Query:   17 PTLRRQLLQTNEDQGI---GEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNS---PEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGS---KEKLEHESDEDNKDENDDEDNE--DGEEERE------------YTDEDDKKAVKRKPYCLRENTRKAKKVKRE--TQSNKKSRRNKCKKM-IVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVSN---FKEELKKVRREMDE-QFTKKIQEEI--------WSLQVQSSAPWKSDF-----ESALVQVNK---QEKQLTDISDTITGMKDQM----GTLSSMVELASKTTDCCAEKERNHAALERCHALALKESASTGEKT--AAEEKAAKLQKLKSGFRICKPQGTFLWPNM------GASNGSSPLVFEVEDLFMVHTPPSVSSSTAL-APPQLPYHHH--HPPTSPIRPVPERRAVTVTVKTARTNDQ-QIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDG-AFSTAATKR----------HFLPSTVKRETAS-AWECIGSSRCSNMSAFVAECTVNAGETSQQGKRECTSSTLCLSSAAGHRMPLSAANST 750
            PT  R  L+ N D  I    + + E+G +YE+DHL LP RTPVQLKSIRV MV+E+T LNV+VRYPS++SL  Y S +K    ++YP  DE FVMGT LA KVL RQ+ +QEF +  +   FWL+  +     PAA  GI         +SQLK NGMV WGIRRQVKF+ R  D S ++ +SS+SFV+G    K K   +S+ED ++E DDE+ +  DGE  ++               E   K +KRK Y  R  T K K        + NK  ++NKC+ + +     +RWSAERY+LAEKNL+EVMK+KGA+  +PI+RP+LR EARKRIGDTGLLDHLLKH+AGK+APGG ERFRRRHNA+G MEYWLESADLV +RKEAGV DPYW PPPGW  GD P Q P+CA+E + LK+E   +KRD E++VS+    +EE+ +++R ++E +F KK  + I        +  Q+  +    SDF     E  L  V+K   +EK ++ +  +  G K Q+      +  +V +  K     A+ +++   +     L   ++A+  +KT   AEEKAAK+Q+LKSGFRICKPQG+FLWPNM         N S+ ++ +VED+ MV TPPSVSSSTA+ AP  LPY+      P SP++PVPERRAVTVTV T  +  + +  ++ YS+        S   T+LINLND+P + G  F  A T R          H LPS V  +  S  W+     R S     VA    ++G+  QQ  + C+SS   L   A   + L+  ++T
Sbjct:   30 PTSDRCTLKRNADHEILQNAKMNIEMGSIYEIDHLYLPPRTPVQLKSIRVAMVSERTVLNVAVRYPSMQSLQTYFSNSK---REMYPAFDEKFVMGTALASKVLLRQVPSQEFAEKKHLHSFWLVNYTTLGAVPAAKNGI--------CLSQLKVNGMVTWGIRRQVKFLGRHEDQS-NNTKSSSSFVQGEEIPKLKTPEKSEEDEEEEEDDEEEDEIDGESVKQKDEEAEEEDDEEAVTEKTNKNLKRKRYSFRTTTVKKKAKTTRGPEKKNKIKKKNKCRVLSVYKDPKDRWSAERYELAEKNLMEVMKAKGAMANNPIIRPELRAEARKRIGDTGLLDHLLKHLAGKIAPGGTERFRRRHNAEGAMEYWLESADLVNIRKEAGVNDPYWIPPPGWKLGDSPIQHPICAQEFKHLKDEIFVLKRDWEEMVSSKEQLEEEVGRLKRRIEELEFKKKQSQAIEASKTMEKYKKQLMMTT---SDFMAKMEEKCLGLVSKLEEKEKSISALMLSTEGKKKQVEPEKQGVQEVVTVEEKKRSKAADDDQSKELIAVDPKL---KAATKAQKTTPTAEEKAAKIQRLKSGFRICKPQGSFLWPNMVRNNKNNGGNMSNQVMVQVEDVHMVPTPPSVSSSTAITAPSLLPYYQQDKQQPVSPVKPVPERRAVTVTVSTISSETRYEAGDNNYST--------SNKTTTLINLNDVPFSTGEVFRQAPTSRQTITTTTVMPHSLPSPVHGDKMSKPWQASRDDRASQ----VAMSEKDSGQ--QQASKCCSSSATSLPQGAASWLVLATPSNT 805

[Close]

BLAST of XM_017383694.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VUD6 ((protein DYAD-like isoform X1 {ECO:0000313|RefSeq:XP_009768556.1}))

HSP 1 Score: 530.406 bits (1365), Expect = 2.943e-175
Identity = 351/802 (43.77%), Postives = 476/802 (59.35%), Query Frame = 0

Query:   17 PTLRRQLLQTNEDQGI---GEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNS---PEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSK-EKL---EHESDEDNKDENDDEDNEDGEEEREY------------TDEDDKKAVKRKPYCLRENTRKAKKVKRE--TQSNKKSRRNKCKKM-IVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVSN---FKEELKKVRREMDE-QFTKKIQEEIWSLQVQSSAPWK-----SDF-----ESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMVELASKTTDCCAEKERNHAALERCHALALKE----SASTGEKT--AAEEKAAKLQKLKSGFRICKPQGTFLWPNM------GASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQ-LPYHHHHP---PTSPIRPVPERRAVTVTVKTARTNDQ-QIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDG-AFSTAATKR----------HFLPSTVKRETAS-AWECIGSSRCSNMSAFVAECTVNAGETSQQGKRECTSSTLCLSSAAGHRMPLSAANST 750
            PT  R  L+ N D  I    + + E+G +YE+DH+ LP RTPVQLKSIRV MV+E+T LNV+VRYPS++SL  Y S +K    ++YP  DE FVMGT LA KVL RQ+ +QEF +  +   FWL+  +     PAA  GI         +SQLK NGMV WGIRRQVKF+ R  D S ++ +SS+SFV+G +  KL   E   +ED +D++++ED  DGE  ++               E   K +KRK Y  R  T K K        + NK  ++NKC+ + +     +RWSAERY+LAEKNL+EVMK+KGA   +PI+RP+LR EARKRIGDTGLLDHLLKH+AGK+APGG ERFRRRHNA+G MEYWLESADLV +RKEAGV DPYW PPPGW  GD P Q P+C +E + LK+E   +KRD E++ S+    +EE+ +++R ++E +F KK  + I + +       +     SDF     E  L  V+K E++   IS  +   +++   +    +   +      EK+R+  A ++   +   E    +A+  +KT   AEEKAAK+Q+LKSGFRICKPQG+FLWPNM         N S+ ++  VED+ MV TPPSVSSSTA+A P  LPY+ H+    P SP++PVPERRAVTVTV T  +  + +  ++ YS+        S   T+LINLND+P + G  F  A T R          H L S V  +  S  W+     R S     VA    ++G+  QQ  + C+SS   L   A   + L+  ++T
Sbjct:   51 PTSDRCTLKRNADHEILQNAKMNIEMGSIYEIDHMYLPPRTPVQLKSIRVAMVSERTVLNVAVRYPSMQSLQTYFSNSK---REMYPAFDEKFVMGTALASKVLLRQVPSQEFAEKKHLHSFWLVNYTTLGAVPAAKNGI--------CLSQLKVNGMVTWGIRRQVKFMGRHEDQS-NNTKSSSSFVQGEEIPKLKTPEKSEEEDEEDDDEEEDEIDGESVKQEDEEAEEDDDEEAVTEKTNKNLKRKRYSFRATTVKKKAKTTRGPEKKNKIKKKNKCRVLSVYKDPKDRWSAERYELAEKNLMEVMKAKGATANNPIIRPELRAEARKRIGDTGLLDHLLKHLAGKIAPGGTERFRRRHNAEGAMEYWLESADLVNIRKEAGVNDPYWIPPPGWKLGDSPIQHPICTQEFKHLKDEIFVLKRDWEEMASSKEQLEEEVGRLKRRIEELEFKKKQSQAIETAKTMEKYKKQLMMTTSDFMAKMEEKCLSLVSKLEEKEKSISTLMLSTEEKKKQVEPEKQGVQEVV-TVGEKKRSKVADDQSKEVIAVEPKLKAATKAQKTTPTAEEKAAKIQRLKSGFRICKPQGSFLWPNMVRNNKNNGGNMSNQVMVLVEDVHMVPTPPSVSSSTAIAAPSLLPYYQHNKQQQPVSPVKPVPERRAVTVTVSTISSETRYEAGDNNYST--------SNKTTTLINLNDVPFSAGEGFQQAPTSRQTITTTTVMPHTLSSPVNGDKMSKPWQASRDDRASQ----VALSGKDSGQ--QQASKCCSSSATSLPQGAASWLVLATPSNT 825

[Close]

BLAST of XM_017383694.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A3Q7FLA0 ((Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc03g093370.2.1}))

HSP 1 Score: 528.48 bits (1360), Expect = 8.548e-175
Identity = 330/724 (45.58%), Postives = 445/724 (61.46%), Query Frame = 0

Query:    2 MKRQEAHTFLDSSQS-PTLRRQLLQTNEDQGIGEK-HFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNSPEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGS---KEKLEHESDEDNKDENDDEDNEDGEEE---------------REYTDEDDKKAVKRKPYCLRENTRKAKKVKR---ETQSNKKSRRNKCKKMIV-GSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVSNFKE---ELKKVRREMDEQFTKKIQEEIWSLQVQSSA-PWKSDFESALVQVN-----KQEKQLTDISDTITGMKDQMGTL----SSMVELASKTTDCCAEKERNHA---ALERCHALALKESASTGEKT-----AAEEKAAKLQKLKSGFRICKPQGTFLWPNM----GASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQ-LPY---HHHHPPTSPIRPVPERRAVTVTVKT--ARTNDQQIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDG 670
            + R E   FL +S++  TL+R     ++ + +G K + E+G +YE+DH+ LP RTPVQLKSIRV MV+E T LNV+VR+PS+ SL  Y S    S+ ++YP  DE FVMGT LA KVL RQ+ + EF +  +   FWL+ ++       G+  K  T    SQLK NGMV WGIRRQVKF+ R  +S+ +  +SS+SFV+G    K ++  +S+ED+++E+++E++E G E                 E   E   + +KRK Y LR  T K  K  R   + Q NK +++NKC+++ V     +RWS ERYK AEKNL+EVMK+KGA+  +PILRP+LR EARK IGDTGLLDHLLKH+AGK+APGG ERFRRRHNA+G MEYWLESADLV +RKEAGV DPYW PPPGW  GD P+Q P+CA+E R LK E   +KRD ED+  + K+   E+ K++R+++E   KK Q+E  +++    A P     +  L+  N     K E++  ++   +      + TL        E+  K  +  +EK    A   A ER +  + + +A    K      AAE KAAK+Q+LKSGFR+CKPQG+FLWPNM       N S  +V +VEDL MV TPPSVSSST +APP  LP+    H++   SP++PVPERRAVTVTV T  + T  +  DN    ST           T+LINLND+P   G
Sbjct:   23 LGRHENQPFLPTSENHSTLKRH----DDHESLGAKMNIEIGSIYEIDHIFLPPRTPVQLKSIRVAMVSETTALNVAVRFPSLESLQTYFS---NSTREMYPAFDEKFVMGTALANKVLLRQVPSLEFAEKKHLHSFWLMNSTS-----LGVLPKSGTC--FSQLKVNGMVTWGIRRQVKFLGRHEESNNT--KSSSSFVQGDDVPKVEVPAKSEEDDEEEDEEEEDEVGAESLKQEDDEETEENYEEEEAVTEKTNRNLKRKRYSLRATTEKQAKKSRIEIQRQKNKVAKKNKCRQLTVYKDPKDRWSTERYKSAEKNLMEVMKAKGAIATNPILRPELRAEARKSIGDTGLLDHLLKHMAGKIAPGGTERFRRRHNAEGAMEYWLESADLVNIRKEAGVNDPYWIPPPGWELGDSPTQHPVCAQEFRQLKNEIFVLKRDWEDMAISKKQLEVEVGKLKRKIEELELKKKQQETKAIETSRKAIPSMEKCKKQLMIANSDFMAKMEEKFLNLVSKLEEKDKVITTLMLSAEQFAEVKRKEVEQGSEKHGVQAVDVATERSNDQSKELTAINPRKAKNAPPAAEGKAAKIQRLKSGFRLCKPQGSFLWPNMVRKNSGCNLSPQVVVQVEDLHMVQTPPSVSSSTTIAPPSLLPFSNNFHNNNLASPVKPVPERRAVTVTVSTISSETCYEAGDNMMNYSTG-------NKTTTLINLNDVPHNVG 723

[Close]

BLAST of XM_017383694.1 vs. ExPASy Swiss-Prot and TrEMBL without DCAR
Match: A0A1U7VKP1 ((protein DYAD-like isoform X2 {ECO:0000313|RefSeq:XP_009768557.1}))

HSP 1 Score: 528.865 bits (1361), Expect = 1.183e-174
Identity = 352/817 (43.08%), Postives = 482/817 (59.00%), Query Frame = 0

Query:    2 MKRQEAHTFLDSSQSPTLRR---QLLQTNEDQGIGEKHFEVGCVYEVDHLNLPTRTPVQLKSIRVVMVTEKTELNVSVRYPSIRSLCNYLSLNKMSSTDIYPFLDEVFVMGTHLAGKVLSRQISAQEFDDNNYFEGFWLIKNS---PEPAALRGIFNKETTTPLMSQLKSNGMVRWGIRRQVKFINRQGDSSTSHPQSSTSFVKGSK-EKL---EHESDEDNKDENDDEDNEDGEEEREY------------TDEDDKKAVKRKPYCLRENTRKAKKVKRE--TQSNKKSRRNKCKKM-IVGSSINRWSAERYKLAEKNLLEVMKSKGALFKSPILRPDLRLEARKRIGDTGLLDHLLKHVAGKLAPGGVERFRRRHNADGQMEYWLESADLVKVRKEAGVQDPYWTPPPGWTPGDCPSQDPLCAKELRLLKEENAKIKRDMEDIVSN---FKEELKKVRREMDE-QFTKKIQEEIWSLQVQSSAPWK-----SDF-----ESALVQVNKQEKQLTDISDTITGMKDQMGTLSSMVELASKTTDCCAEKERNHAALERCHALALKE----SASTGEKT--AAEEKAAKLQKLKSGFRICKPQGTFLWPNM------GASNGSSPLVFEVEDLFMVHTPPSVSSSTALAPPQ-LPYHHHHP---PTSPIRPVPERRAVTVTVKTARTNDQ-QIDNHGYSSTAIVASPKSKSNTSLINLNDIPDTDG-AFSTAATKR----------HFLPSTVKRETAS-AWECIGSSRCSNMSAFVAECTVNAGETSQQGKRECTSSTLCLSSAAGHRMPLSAANST 750
            + R +    L +S   TL+R   ++LQ        + + E+G +YE+DH+ LP RTPVQLKSIRV MV+E+T LNV+VRYPS++SL  Y S +K    ++YP  DE FVMGT LA KVL RQ+ +QEF +  +   FWL+  +     PAA  GI         +SQLK NGMV WGIRRQVKF+ R  D S ++ +SS+SFV+G +  KL   E   +ED +D++++ED  DGE  ++               E   K +KRK Y  R  T K K        + NK  ++NKC+ + +     +RWSAERY+LAEKNL+EVMK+KGA   +PI+RP+LR EARKRIGDTGLLDHLLKH+AGK+APGG ERFRRRHNA+G MEYWLESADLV +RKEAGV DPYW PPPGW  GD P Q P+C +E + LK+E   +KRD E++ S+    +EE+ +++R ++E +F KK  + I + +       +     SDF     E  L  V+K E++   IS  +   +++   +    +   +      EK+R+  A ++   +   E    +A+  +KT   AEEKAAK+Q+LKSGFRICKPQG+FLWPNM         N S+ ++  VED+ MV TPPSVSSSTA+A P  LPY+ H+    P SP++PVPERRAVTVTV T  +  + +  ++ YS+        S   T+LINLND+P + G  F  A T R          H L S V  +  S  W+     R S     VA    ++G+  QQ  + C+SS   L   A   + L+  ++T
Sbjct:   41 LARHDNQPLLPTSDRCTLKRNDHEILQN------AKMNIEMGSIYEIDHMYLPPRTPVQLKSIRVAMVSERTVLNVAVRYPSMQSLQTYFSNSK---REMYPAFDEKFVMGTALASKVLLRQVPSQEFAEKKHLHSFWLVNYTTLGAVPAAKNGI--------CLSQLKVNGMVTWGIRRQVKFMGRHEDQS-NNTKSSSSFVQGEEIPKLKTPEKSEEEDEEDDDEEEDEIDGESVKQEDEEAEEDDDEEAVTEKTNKNLKRKRYSFRATTVKKKAKTTRGPEKKNKIKKKNKCRVLSVYKDPKDRWSAERYELAEKNLMEVMKAKGATANNPIIRPELRAEARKRIGDTGLLDHLLKHLAGKIAPGGTERFRRRHNAEGAMEYWLESADLVNIRKEAGVNDPYWIPPPGWKLGDSPIQHPICTQEFKHLKDEIFVLKRDWEEMASSKEQLEEEVGRLKRRIEELEFKKKQSQAIETAKTMEKYKKQLMMTTSDFMAKMEEKCLSLVSKLEEKEKSISTLMLSTEEKKKQVEPEKQGVQEVV-TVGEKKRSKVADDQSKEVIAVEPKLKAATKAQKTTPTAEEKAAKIQRLKSGFRICKPQGSFLWPNMVRNNKNNGGNMSNQVMVLVEDVHMVPTPPSVSSSTAIAAPSLLPYYQHNKQQQPVSPVKPVPERRAVTVTVSTISSETRYEAGDNNYST--------SNKTTTLINLNDVPFSAGEGFQQAPTSRQTITTTTVMPHTLSSPVNGDKMSKPWQASRDDRASQ----VALSGKDSGQ--QQASKCCSSSATSLPQGAASWLVLATPSNT 824


Match Name	Stats	Description
A0A4S4EMR0	E-Value: 0.000e+0, PID: 48.75	(Uncharacterized protein {ECO:0000313\|EMBL:THG1794... [more]
A0A7J7I456	E-Value: 0.000e+0, PID: 48.62	(Uncharacterized protein {ECO:0000313\|EMBL:KAF5959... [more]
A0A2R6PLV5	E-Value: 0.000e+0, PID: 47.86	(Protein DYAD like {ECO:0000313\|EMBL:PSR93315.1})[more]
A0A7J0GWK7	E-Value: 0.000e+0, PID: 49.48	(Similar to SWITCH1 {ECO:0000313\|EMBL:GFZ15172.1})[more]
A0A7J0EDF6	E-Value: 0.000e+0, PID: 48.99	(Similar to SWITCH1 {ECO:0000313\|EMBL:GFY84382.1})[more]
A0A834LTY5	E-Value: 0.000e+0, PID: 48.49	(Uncharacterized protein {ECO:0000313\|EMBL:KAF7148... [more]
A0A1S3ZKP1	E-Value: 9.753e-177, PID: 44.18	(protein DYAD-like {ECO:0000313\|RefSeq:XP_01646510... [more]
A0A1U7VUD6	E-Value: 2.943e-175, PID: 43.77	(protein DYAD-like isoform X1 {ECO:0000313\|RefSeq:... [more]
A0A3Q7FLA0	E-Value: 8.548e-175, PID: 45.58	(Uncharacterized protein {ECO:0000313\|EnsemblPlant... [more]
A0A1U7VKP1	E-Value: 1.183e-174, PID: 43.08	(protein DYAD-like isoform X2 {ECO:0000313\|RefSeq:... [more]

Analysis:


Name	Description
Carrot Genome Assembly DCARv2	An orange, doubled-haploid, Nantes-type carrot (DH1) was used for genome sequencing. We used BAC end sequences and a newly developed linkage map with 2,075 markers to correct 135 scaffolds with one or more chimeric regions. The resulting v2.0 assembly spans 421.5 Mb and contains 4,907 scaffolds (N50 of 12.7 Mb), accounting for ∼90% of the estimated genome size of 473 Mb. The scaftig N50 of 31.2 kb is similar to those of other high-quality genome assemblies such as potato and pepper. About 86% (362 Mb) of the assembled genome is included in only 60 superscaffolds anchored to the nine pseudomolecules. The longest superscaffold spans 30.2 Mb, 85% of chromosome 4. There are a few different naming schemes for this assembly. First there is the Authors' original naming scheme: Sequences with DCARv2 prefix are the original assembly as submitted to NCBI. These are labelled DCARv2_Chr1 through DCARv2_Chr9 for the chromosome pseudomolecules, DCARv2_MT and DCARv2_PT for the organellar assemblies, DCARv2_B1 and up for unincorporated superscaffolds, DCARv2_S26.1 and up for unincorporated scaffolds, and DCARv2_C10542132 and up for unincorporated contigs. A file with sequences using this naming scheme can be downloaded from the File: link below. These sequences can be viewed in JBrowse here. Phytozome genome ID 388: The authors' sequences and gene predictions were also submitted to Phytozome, and can be accessed at this address: https://phytozome-next.jgi.doe.gov/info/Dcarota_v2_0 LNRQ01: These sequences were then assigned GenBank accession numbers starting at LNRQ01000001.1 which corresponds to DCARv2_Chr1, up to LNRQ01004826.1 which corresponds to an unincorporated contig, DCARv2_C10750146. These reside in bioproject PRJNA268187, which is a subproject of umbrella project PRJNA285926. Assembly GCA_001625215.1: The genome assembly was later defined an accession number GCA_001625215.1 for assembly ASM162521v1 which consists of only the 9 chromosome sequences and the plastid assembly, which have accession numbers from CM004278.1 to CM004286.1 for the chromosomes and CM004358.1 for the plastid. The mitochondrial genome was not included because it is classified as an incomplete sequence. RefSeq: The assembly was then later added to RefSeq, and there another new set of identifiers was defined from NC_030381.1 to NC_030389.1 for the chromosomes, and from NW_016089425.1 to NW_016094239.1 for unincorporated scaffolds and contigs. These reside in bioproject PRJNA326436. Note that NCBI substituted different assembled organellar genomes from different genotypes for the RefSeq records. The NCBI Sequence report lists the correspondences between the various naming methods Link to the LNRQ01000000.1 master record at NCBI Raw Reads: Link to SRA accessions used for the genome assembly This genome is available in the CarrotOmics Blast Search
NCBI Daucus carota subsp. sativus Annotation Release 100	The RefSeq genome records for Daucus carota subsp. sativus were annotated by the NCBI Eukaryotic Genome Annotation Pipeline, an automated pipeline that annotates genes, transcripts and proteins on draft and finished genome assemblies. This report presents statistics on the annotation products, the input data used in the pipeline and intermediate alignment results. View the full report at https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Daucus_carota_subsp._sativus/100/ Data from this analysis can be viewed in JBrowse here.
NCBI peptide blastp to SwissProt and TrEMBL without DCAR	This analysis is a blastp search of all of the NCBI Daucus carota subsp. sativus Annotation Release 100 polypeptide sequences against combined ExPASy SwissProt and TrEMBL databases from Nov. 17, 2021. Prior to performing the blast search, the database was filtered to remove organisms not in the Viridiplantae, and also filtered to remove DCAR gene predictions from DCAR V1.0 Gene Prediction.